Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059347.t1 | XP_013461524.1 | 97.2 | 362 | 10 | 0 | 1 | 362 | 71 | 432 | 4.00E-189 | 670.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059347.t1 | Q8VXZ7 | 73.4 | 361 | 96 | 0 | 1 | 361 | 75 | 435 | 2.3e-153 | 543.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059347.t1 | A0A072V0K8 | 97.2 | 362 | 10 | 0 | 1 | 362 | 71 | 432 | 2.9e-189 | 670.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049391 | MS.gene059347 | 0.853628 | 2.11E-61 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059347.t1 | MTR_3g094160 | 97.238 | 362 | 10 | 0 | 1 | 362 | 71 | 432 | 0.0 | 735 |
| MS.gene059347.t1 | MTR_1g077520 | 63.128 | 358 | 127 | 3 | 1 | 357 | 56 | 409 | 3.52e-174 | 491 |
| MS.gene059347.t1 | MTR_1g077480 | 63.510 | 359 | 120 | 4 | 1 | 355 | 60 | 411 | 5.64e-171 | 483 |
| MS.gene059347.t1 | MTR_6g069140 | 63.611 | 360 | 120 | 4 | 1 | 356 | 68 | 420 | 1.23e-169 | 479 |
| MS.gene059347.t1 | MTR_6g086625 | 62.674 | 359 | 123 | 4 | 1 | 355 | 54 | 405 | 1.76e-169 | 479 |
| MS.gene059347.t1 | MTR_6g086575 | 62.360 | 356 | 129 | 3 | 1 | 355 | 53 | 404 | 4.12e-169 | 478 |
| MS.gene059347.t1 | MTR_7g073650 | 62.745 | 357 | 128 | 3 | 1 | 355 | 53 | 406 | 2.47e-163 | 463 |
| MS.gene059347.t1 | MTR_7g073640 | 62.185 | 357 | 130 | 3 | 1 | 355 | 54 | 407 | 8.08e-162 | 459 |
| MS.gene059347.t1 | MTR_1g077520 | 68.750 | 272 | 84 | 1 | 1 | 271 | 56 | 327 | 2.08e-146 | 417 |
| MS.gene059347.t1 | MTR_1g078410 | 49.697 | 165 | 60 | 4 | 16 | 176 | 39 | 184 | 1.63e-41 | 144 |
| MS.gene059347.t1 | MTR_0279s0030 | 53.175 | 126 | 55 | 2 | 231 | 355 | 101 | 223 | 1.72e-38 | 137 |
| MS.gene059347.t1 | MTR_0279s0030 | 53.175 | 126 | 55 | 2 | 231 | 355 | 185 | 307 | 1.73e-37 | 137 |
| MS.gene059347.t1 | MTR_0279s0030 | 53.175 | 126 | 55 | 2 | 231 | 355 | 250 | 372 | 1.33e-36 | 136 |
| MS.gene059347.t1 | MTR_3g094180 | 87.879 | 66 | 8 | 0 | 261 | 326 | 4 | 69 | 7.80e-33 | 118 |
| MS.gene059347.t1 | MTR_8g089725 | 23.226 | 465 | 241 | 17 | 2 | 353 | 41 | 502 | 2.41e-17 | 83.6 |
| MS.gene059347.t1 | MTR_8g089735 | 23.226 | 465 | 241 | 17 | 2 | 353 | 41 | 502 | 2.71e-17 | 83.6 |
| MS.gene059347.t1 | MTR_8g089745 | 25.648 | 347 | 170 | 12 | 2 | 262 | 41 | 385 | 4.70e-17 | 82.8 |
| MS.gene059347.t1 | MTR_8g089745 | 25.648 | 347 | 170 | 12 | 2 | 262 | 41 | 385 | 5.26e-17 | 82.8 |
| MS.gene059347.t1 | MTR_3g086580 | 25.071 | 351 | 166 | 12 | 2 | 259 | 43 | 389 | 5.51e-17 | 82.8 |
| MS.gene059347.t1 | MTR_8g089740 | 26.000 | 350 | 166 | 12 | 2 | 262 | 36 | 381 | 1.41e-16 | 81.6 |
| MS.gene059347.t1 | MTR_2g096530 | 24.638 | 345 | 171 | 10 | 2 | 259 | 43 | 385 | 3.17e-16 | 80.5 |
| MS.gene059347.t1 | MTR_3g086580 | 26.966 | 178 | 103 | 5 | 108 | 259 | 26 | 202 | 2.37e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059347.t1 | AT3G56310 | 77.839 | 361 | 80 | 0 | 1 | 361 | 75 | 435 | 0.0 | 608 |
| MS.gene059347.t1 | AT3G56310 | 73.961 | 361 | 70 | 1 | 1 | 361 | 75 | 411 | 0.0 | 564 |
| MS.gene059347.t1 | AT5G08370 | 64.067 | 359 | 124 | 3 | 1 | 358 | 16 | 370 | 7.78e-171 | 481 |
| MS.gene059347.t1 | AT5G08370 | 64.067 | 359 | 124 | 3 | 1 | 358 | 42 | 396 | 9.27e-171 | 481 |
| MS.gene059347.t1 | AT5G08380 | 61.798 | 356 | 132 | 2 | 1 | 355 | 56 | 408 | 2.06e-164 | 466 |
| MS.gene059347.t1 | AT5G08380 | 68.582 | 261 | 81 | 1 | 1 | 260 | 56 | 316 | 4.03e-134 | 385 |
| MS.gene059347.t1 | AT3G26380 | 24.713 | 348 | 173 | 11 | 2 | 262 | 45 | 390 | 2.35e-18 | 86.7 |
| MS.gene059347.t1 | AT3G26380 | 24.638 | 345 | 171 | 11 | 2 | 259 | 45 | 387 | 3.34e-18 | 86.7 |
Find 99 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGTGACAAGAAATTTAA+AGG | 0.225462 | 3.4:+85811017 | MS.gene059347:CDS |
| TATCAATGAAACGGTTATTA+AGG | 0.252370 | 3.4:+85810332 | MS.gene059347:CDS |
| TTGCAGCATAAGGTAATAAA+TGG | 0.260118 | 3.4:+85814194 | MS.gene059347:intron |
| CAACTTGAACTTTCCTTCCT+TGG | 0.282948 | 3.4:-85813588 | None:intergenic |
| ATCGTTTGGCTGTTGCTCTT+TGG | 0.288869 | 3.4:+85813919 | MS.gene059347:CDS |
| TGCAGATTTATTTGCCTCTT+GGG | 0.323327 | 3.4:+85811745 | MS.gene059347:CDS |
| TACAATGTGCAGACGATTGC+TGG | 0.329309 | 3.4:+85810992 | MS.gene059347:intron |
| ATGCAGATTTATTTGCCTCT+TGG | 0.342982 | 3.4:+85811744 | MS.gene059347:CDS |
| GCTTAAAATTTCGAATGTTT+CGG | 0.347419 | 3.4:-85813361 | None:intergenic |
| GCAGCACTCGGGCTTGAATC+TGG | 0.357456 | 3.4:+85813981 | MS.gene059347:CDS |
| GTTCAAGTTGCTGGAATAGA+TGG | 0.358856 | 3.4:+85813601 | MS.gene059347:CDS |
| TGAAGTGAGCACGGTATTCC+TGG | 0.364079 | 3.4:-85813202 | None:intergenic |
| GTGTTGACGATCCTGCTCTA+TGG | 0.368509 | 3.4:+85812784 | MS.gene059347:CDS |
| GCCAAACGATTTCCTGATAA+AGG | 0.371429 | 3.4:-85813906 | None:intergenic |
| GTCTGGGCAGGTCCTTTATC+AGG | 0.376851 | 3.4:+85813894 | MS.gene059347:CDS |
| GGAAGGAAAGTTCAAGTTGC+TGG | 0.382276 | 3.4:+85813592 | MS.gene059347:CDS |
| ATTGCCAACTTCCAACATAT+CGG | 0.393715 | 3.4:-85813165 | None:intergenic |
| GAAACGGTTATTAAGGAAAC+AGG | 0.397519 | 3.4:+85810339 | MS.gene059347:CDS |
| TCCTTTATCAGGAAATCGTT+TGG | 0.403234 | 3.4:+85813905 | MS.gene059347:CDS |
| ACCGTGCTCACTTCAGCATA+TGG | 0.411756 | 3.4:+85813210 | MS.gene059347:CDS |
| TGGGCTGCATATGCCGGTCC+TGG | 0.417041 | 3.4:+85813039 | MS.gene059347:CDS |
| GATGGAAATGTCTTACGATC+AGG | 0.434606 | 3.4:-85811510 | None:intergenic |
| TCAACTGGATTGGCCAAGTT+GGG | 0.435322 | 3.4:+85810870 | MS.gene059347:CDS |
| GGTTATGTGTACGTCAATAT+AGG | 0.436209 | 3.4:+85810891 | MS.gene059347:CDS |
| TCCCTTCCCATGGACATAAT+CGG | 0.441983 | 3.4:-85811550 | None:intergenic |
| TTGCCAACTTCCAACATATC+GGG | 0.455011 | 3.4:-85813164 | None:intergenic |
| CCGATGACATCAATGATACA+TGG | 0.456542 | 3.4:+85812838 | MS.gene059347:CDS |
| GCTGATGCACTGGTATCAAC+TGG | 0.468770 | 3.4:+85810855 | MS.gene059347:intron |
| CAGGCACAGTTGGTAATAGT+TGG | 0.471145 | 3.4:+85812808 | MS.gene059347:CDS |
| GACCGATGGGCTGCATATGC+CGG | 0.472336 | 3.4:+85813033 | MS.gene059347:CDS |
| GCTCTATGGGCAGGCACAGT+TGG | 0.473297 | 3.4:+85812798 | MS.gene059347:CDS |
| CGTGATGCCCTCAATGAAAC+TGG | 0.473669 | 3.4:+85812644 | MS.gene059347:CDS |
| TTCCGTAAGGGATTTGTGGC+AGG | 0.476633 | 3.4:+85814013 | MS.gene059347:CDS |
| GAAGTCATTGCTGTAAATCA+AGG | 0.478784 | 3.4:+85813390 | MS.gene059347:CDS |
| ATGTTTCCGTAAGGGATTTG+TGG | 0.481338 | 3.4:+85814009 | MS.gene059347:CDS |
| GCAGAGTAAGATGCTGTAGA+TGG | 0.482664 | 3.4:-85814281 | None:intergenic |
| TGTCTCTCTGCAGACTCACT+TGG | 0.485221 | 3.4:+85813562 | MS.gene059347:intron |
| CAATGGTGGCATGACTTACC+AGG | 0.490618 | 3.4:+85813184 | MS.gene059347:CDS |
| TGCATGCAATATCAATGAAA+CGG | 0.491799 | 3.4:+85810323 | MS.gene059347:CDS |
| TTTACGACCAGTTTCATTGA+GGG | 0.492041 | 3.4:-85812651 | None:intergenic |
| TGTTGACGATCCTGCTCTAT+GGG | 0.493096 | 3.4:+85812785 | MS.gene059347:CDS |
| GACGATCCTGCTCTATGGGC+AGG | 0.495630 | 3.4:+85812789 | MS.gene059347:CDS |
| ATCAACTGGATTGGCCAAGT+TGG | 0.496099 | 3.4:+85810869 | MS.gene059347:CDS |
| TGGAATAGATGGTTGTAGTC+AGG | 0.503086 | 3.4:+85813612 | MS.gene059347:CDS |
| GCACTTGCCGATTATGTCCA+TGG | 0.503218 | 3.4:+85811543 | MS.gene059347:CDS |
| CCGTGCTCACTTCAGCATAT+GGG | 0.507268 | 3.4:+85813211 | MS.gene059347:CDS |
| ATGTCTTACGATCAGGGACC+AGG | 0.511454 | 3.4:-85811503 | None:intergenic |
| TATGACAATTGTTACAATCT+CGG | 0.512184 | 3.4:+85812503 | MS.gene059347:CDS |
| TTCGACAGACCCCGATATGT+TGG | 0.518184 | 3.4:+85813154 | MS.gene059347:intron |
| CATATGCCGGTCCTGGAGGA+TGG | 0.519568 | 3.4:+85813046 | MS.gene059347:CDS |
| TTGCTGATCTTAATGACCGA+TGG | 0.521286 | 3.4:+85813019 | MS.gene059347:CDS |
| TACCTGCCACAAATCCCTTA+CGG | 0.521890 | 3.4:-85814015 | None:intergenic |
| CTGGAATTCATGTTTCCGTA+AGG | 0.522101 | 3.4:+85814000 | MS.gene059347:CDS |
| CGTGGAAAATTGATCCTGGT+CGG | 0.524701 | 3.4:-85811712 | None:intergenic |
| ATTTATTTACAGGTCTGGGC+AGG | 0.524714 | 3.4:+85813882 | MS.gene059347:intron |
| GCCGATTATGTCCATGGGAA+GGG | 0.529046 | 3.4:+85811549 | MS.gene059347:CDS |
| TTGTGACTATAACAGCATCA+TGG | 0.531411 | 3.4:+85813958 | MS.gene059347:CDS |
| TATCCTTGCAGCTGATGCAC+TGG | 0.533289 | 3.4:+85810845 | MS.gene059347:intron |
| GCAAGTGCTTTGATTCCTGA+TGG | 0.533880 | 3.4:-85811528 | None:intergenic |
| CTTGGCATATATTCTGATGC+TGG | 0.535596 | 3.4:+85811579 | MS.gene059347:CDS |
| CATGGGAAGGGACTCAAGCT+TGG | 0.538301 | 3.4:+85811561 | MS.gene059347:CDS |
| GGTGTACCATTCCATCCTCC+AGG | 0.542408 | 3.4:-85813057 | None:intergenic |
| ACAGCATCATGGGCAGCACT+CGG | 0.542560 | 3.4:+85813969 | MS.gene059347:CDS |
| GACGTACACATAACCCAACT+TGG | 0.542647 | 3.4:-85810883 | None:intergenic |
| ACCATTCCATCCTCCAGGAC+CGG | 0.542782 | 3.4:-85813052 | None:intergenic |
| GCCGGTCCTGGAGGATGGAA+TGG | 0.543310 | 3.4:+85813051 | MS.gene059347:CDS |
| CAGCATATGGGCTTTAGCAA+AGG | 0.544487 | 3.4:+85813223 | MS.gene059347:CDS |
| TGGAATTCATGTTTCCGTAA+GGG | 0.545353 | 3.4:+85814001 | MS.gene059347:CDS |
| GCAGACTCACTTGGAGTCCA+AGG | 0.547998 | 3.4:+85813571 | MS.gene059347:intron |
| GATCGTAAGACATTTCCATC+AGG | 0.548086 | 3.4:+85811513 | MS.gene059347:CDS |
| TGCTGATCTTAATGACCGAT+GGG | 0.548796 | 3.4:+85813020 | MS.gene059347:CDS |
| ACTGTGCCTGCCCATAGAGC+AGG | 0.551108 | 3.4:-85812795 | None:intergenic |
| GACCCCGATATGTTGGAAGT+TGG | 0.558301 | 3.4:+85813161 | MS.gene059347:intron |
| TGTGACTATAACAGCATCAT+GGG | 0.560594 | 3.4:+85813959 | MS.gene059347:CDS |
| ACATCGCAACCAATCAAAAG+AGG | 0.562580 | 3.4:-85813324 | None:intergenic |
| TTGGCATATATTCTGATGCT+GGG | 0.564745 | 3.4:+85811580 | MS.gene059347:CDS |
| ATGGAAATGTCTTACGATCA+GGG | 0.566931 | 3.4:-85811509 | None:intergenic |
| TTTGGAAGTGTAGGGTGACC+TGG | 0.567490 | 3.4:+85811485 | MS.gene059347:intron |
| CAGCATCATGGGCAGCACTC+GGG | 0.569334 | 3.4:+85813970 | MS.gene059347:CDS |
| CCATGTATCATTGATGTCAT+CGG | 0.571669 | 3.4:-85812838 | None:intergenic |
| TGCCGATTATGTCCATGGGA+AGG | 0.578023 | 3.4:+85811548 | MS.gene059347:CDS |
| TGCACTGGTATCAACTGGAT+TGG | 0.584252 | 3.4:+85810860 | MS.gene059347:CDS |
| GACCGGCATATGCAGCCCAT+CGG | 0.586985 | 3.4:-85813035 | None:intergenic |
| TTTACATGTCAAGTCCGACC+AGG | 0.587998 | 3.4:+85811698 | MS.gene059347:CDS |
| CACTTGCCGATTATGTCCAT+GGG | 0.592383 | 3.4:+85811544 | MS.gene059347:CDS |
| CCCATATGCTGAAGTGAGCA+CGG | 0.599322 | 3.4:-85813211 | None:intergenic |
| TCATTGAGGGCATCACGCAT+AGG | 0.600581 | 3.4:-85812638 | None:intergenic |
| ACTCACTTGGAGTCCAAGGA+AGG | 0.601676 | 3.4:+85813575 | MS.gene059347:CDS |
| TTGAGGGCATCACGCATAGG+TGG | 0.611936 | 3.4:-85812635 | None:intergenic |
| CGATGACATCAATGATACAT+GGG | 0.614007 | 3.4:+85812839 | MS.gene059347:CDS |
| ATGTTGGAAGTTGGCAATGG+TGG | 0.621869 | 3.4:+85813170 | MS.gene059347:CDS |
| TGTCGTGTAGATGGAACAGC+TGG | 0.624032 | 3.4:+85810292 | MS.gene059347:intron |
| CAAGCTTGAGTCCCTTCCCA+TGG | 0.642664 | 3.4:-85811560 | None:intergenic |
| ACATCAATGATACATGGGCA+AGG | 0.643423 | 3.4:+85812844 | MS.gene059347:CDS |
| TGCCAACTTCCAACATATCG+GGG | 0.658114 | 3.4:-85813163 | None:intergenic |
| TAAAATTTCGAATGTTTCGG+CGG | 0.663405 | 3.4:-85813358 | None:intergenic |
| ATATTAGAATCTAACCCAAG+AGG | 0.678750 | 3.4:-85811759 | None:intergenic |
| GATATGTTGGAAGTTGGCAA+TGG | 0.679682 | 3.4:+85813167 | MS.gene059347:CDS |
| GCTGCATATGCCGGTCCTGG+AGG | 0.687897 | 3.4:+85813042 | MS.gene059347:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAACCA+AGG | - | chr3.4:85813425-85813444 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAACCAA+GGG | - | chr3.4:85813424-85813443 | None:intergenic | 10.0% |
| !! | AATAAAATAAAATTGAATTC+TGG | - | chr3.4:85810225-85810244 | None:intergenic | 10.0% |
| !! | CAAATATATAAATATAGAAT+AGG | - | chr3.4:85810961-85810980 | None:intergenic | 10.0% |
| !! | TAAATAAATATGTAAAACTA+AGG | - | chr3.4:85813871-85813890 | None:intergenic | 10.0% |
| !! | TAATTAAATTTCAAAAAGAT+AGG | - | chr3.4:85813081-85813100 | None:intergenic | 10.0% |
| !!! | TTATTTCTTAAATATATCAA+AGG | - | chr3.4:85811239-85811258 | None:intergenic | 10.0% |
| !! | AATATTAAAATTGTAACAGT+GGG | + | chr3.4:85810932-85810951 | MS.gene059347:intron | 15.0% |
| !! | AATTCTTAAATGAAAATGAA+TGG | + | chr3.4:85812065-85812084 | MS.gene059347:intron | 15.0% |
| !! | ACTACATTATAAACAAAATT+TGG | - | chr3.4:85812953-85812972 | None:intergenic | 15.0% |
| !! | AGAAAATAAGATTAGAAAAT+AGG | - | chr3.4:85814110-85814129 | None:intergenic | 15.0% |
| !! | CAATTGATCAAATAAATTTA+TGG | + | chr3.4:85810175-85810194 | MS.gene059347:intron | 15.0% |
| !! | TTCATTTATCTTATTCAAAA+AGG | + | chr3.4:85813513-85813532 | MS.gene059347:intron | 15.0% |
| !! | TTTCAATTAAAATAAGTGTA+TGG | - | chr3.4:85813761-85813780 | None:intergenic | 15.0% |
| !!! | AATAAGTTGAAAACATATTA+TGG | - | chr3.4:85810413-85810432 | None:intergenic | 15.0% |
| !!! | AGTTTTACATATTTATTTAC+AGG | + | chr3.4:85813872-85813891 | MS.gene059347:intron | 15.0% |
| !! | AAATTCTATATCAAGTCAAA+AGG | - | chr3.4:85810640-85810659 | None:intergenic | 20.0% |
| !! | AACATATATATCACTCTTAA+CGG | - | chr3.4:85810757-85810776 | None:intergenic | 20.0% |
| !! | AAGTTGTTCTATAAGTATTA+TGG | - | chr3.4:85810448-85810467 | None:intergenic | 20.0% |
| !! | ACATATAAATTGAATCAATG+TGG | + | chr3.4:85812593-85812612 | MS.gene059347:intron | 20.0% |
| !! | ATAGTTATCAATCATTGAAA+TGG | + | chr3.4:85812102-85812121 | MS.gene059347:intron | 20.0% |
| !! | ATTATAAACAAAATTTGGAC+AGG | - | chr3.4:85812948-85812967 | None:intergenic | 20.0% |
| !! | CAATATTAAAATTGTAACAG+TGG | + | chr3.4:85810931-85810950 | MS.gene059347:intron | 20.0% |
| !! | CTTCATAAATAAATAGTTTG+CGG | + | chr3.4:85812405-85812424 | MS.gene059347:intron | 20.0% |
| !! | TACTTTCACAAAATTATACA+TGG | + | chr3.4:85811608-85811627 | MS.gene059347:intron | 20.0% |
| !! | TGATTCAATTTATATGTACT+AGG | - | chr3.4:85812590-85812609 | None:intergenic | 20.0% |
| !! | TGCAAAAACAATAGTATAAT+GGG | - | chr3.4:85812761-85812780 | None:intergenic | 20.0% |
| !! | TGTTCATAATAACAATACTA+TGG | + | chr3.4:85813256-85813275 | MS.gene059347:intron | 20.0% |
| !! | TTAAGAGTGATATATATGTT+TGG | + | chr3.4:85810757-85810776 | MS.gene059347:intron | 20.0% |
| !!! | ATTATACTATTGTTTTTGCA+GGG | + | chr3.4:85812761-85812780 | MS.gene059347:intron | 20.0% |
| !!! | CACTGTTACAATTTTAATAT+TGG | - | chr3.4:85810933-85810952 | None:intergenic | 20.0% |
| !!! | CAGCATAATATATCTTTTTA+TGG | + | chr3.4:85811926-85811945 | MS.gene059347:intron | 20.0% |
| !!! | CATATGTTAATGTTATGTTT+TGG | + | chr3.4:85811175-85811194 | MS.gene059347:intron | 20.0% |
| !!! | TAGTACTATAACTTTAAGTT+GGG | - | chr3.4:85813829-85813848 | None:intergenic | 20.0% |
| !!! | TCAATGATTGATAACTATTA+AGG | - | chr3.4:85812100-85812119 | None:intergenic | 20.0% |
| !!! | TTAATATAAGTTGATGCTTA+AGG | + | chr3.4:85813443-85813462 | MS.gene059347:intron | 20.0% |
| !!! | TTTTGTTATGAGTTTACTTA+CGG | + | chr3.4:85812716-85812735 | MS.gene059347:intron | 20.0% |
| ! | AAAAAAAAAAAAACCAAGGG+TGG | - | chr3.4:85813421-85813440 | None:intergenic | 25.0% |
| ! | AAAGTTAGTCATAATGAACA+TGG | - | chr3.4:85811658-85811677 | None:intergenic | 25.0% |
| ! | AAATGAAAAAATCATACACC+AGG | - | chr3.4:85813500-85813519 | None:intergenic | 25.0% |
| ! | AAGTTAGTCATAATGAACAT+GGG | - | chr3.4:85811657-85811676 | None:intergenic | 25.0% |
| ! | ACATATTTATTTACAGGTCT+GGG | + | chr3.4:85813878-85813897 | MS.gene059347:intron | 25.0% |
| ! | ACCCTGATAAAATTATAGAA+TGG | - | chr3.4:85812468-85812487 | None:intergenic | 25.0% |
| ! | ACTATTTATTTATGAAGCAG+CGG | - | chr3.4:85812402-85812421 | None:intergenic | 25.0% |
| ! | ATATCACTGAATATACTTGA+GGG | + | chr3.4:85811063-85811082 | MS.gene059347:intron | 25.0% |
| ! | ATTTATGTGACATGATGATT+TGG | + | chr3.4:85810269-85810288 | MS.gene059347:intron | 25.0% |
| ! | CCCTGATAAAATTATAGAAT+GGG | - | chr3.4:85812467-85812486 | None:intergenic | 25.0% |
| ! | CTGCAAAAACAATAGTATAA+TGG | - | chr3.4:85812762-85812781 | None:intergenic | 25.0% |
| ! | CTTCCAAATCAAATATAGTA+AGG | - | chr3.4:85811473-85811492 | None:intergenic | 25.0% |
| ! | GCAAAATAAAATCTTGATGA+AGG | + | chr3.4:85810690-85810709 | MS.gene059347:intron | 25.0% |
| ! | GCTTAAAATTTCGAATGTTT+CGG | - | chr3.4:85813364-85813383 | None:intergenic | 25.0% |
| ! | GTAGTACTATAACTTTAAGT+TGG | - | chr3.4:85813830-85813849 | None:intergenic | 25.0% |
| ! | GTATATTCAGTGATATCAAA+AGG | - | chr3.4:85811059-85811078 | None:intergenic | 25.0% |
| ! | GTTCCTTACTATATTTGATT+TGG | + | chr3.4:85811467-85811486 | MS.gene059347:intron | 25.0% |
| ! | TACATATTTATTTACAGGTC+TGG | + | chr3.4:85813877-85813896 | MS.gene059347:intron | 25.0% |
| ! | TATCAATGAAACGGTTATTA+AGG | + | chr3.4:85810332-85810351 | MS.gene059347:CDS | 25.0% |
| ! | TATGACAATTGTTACAATCT+CGG | + | chr3.4:85812503-85812522 | MS.gene059347:CDS | 25.0% |
| ! | TATGCTATAAGTGCTTAATT+AGG | + | chr3.4:85810551-85810570 | MS.gene059347:intron | 25.0% |
| ! | TCAAAAAGGTTAAATGAGTA+AGG | + | chr3.4:85813527-85813546 | MS.gene059347:intron | 25.0% |
| ! | TGATAAAATTATAGAATGGG+AGG | - | chr3.4:85812464-85812483 | None:intergenic | 25.0% |
| ! | TGGATTGTTATGATGATTAA+CGG | + | chr3.4:85810605-85810624 | MS.gene059347:intron | 25.0% |
| ! | TTCAGACTTCTAGATATTTA+TGG | - | chr3.4:85813719-85813738 | None:intergenic | 25.0% |
| ! | TTCTGTGACAAGAAATTTAA+AGG | + | chr3.4:85811017-85811036 | MS.gene059347:CDS | 25.0% |
| !! | CCCATTCTATAATTTTATCA+GGG | + | chr3.4:85812464-85812483 | MS.gene059347:intron | 25.0% |
| !! | GCATCTATGTGATAAATTTT+GGG | + | chr3.4:85813661-85813680 | MS.gene059347:intron | 25.0% |
| !! | GGTTCATTCAACATTTTATT+GGG | + | chr3.4:85812895-85812914 | MS.gene059347:intron | 25.0% |
| !! | GTTCATTCAACATTTTATTG+GGG | + | chr3.4:85812896-85812915 | MS.gene059347:intron | 25.0% |
| !! | TCCCATTCTATAATTTTATC+AGG | + | chr3.4:85812463-85812482 | MS.gene059347:intron | 25.0% |
| !! | TGCATCTATGTGATAAATTT+TGG | + | chr3.4:85813660-85813679 | MS.gene059347:intron | 25.0% |
| !! | TGGTTCATTCAACATTTTAT+TGG | + | chr3.4:85812894-85812913 | MS.gene059347:intron | 25.0% |
| !! | TTCTTGTTTATATTGTTACC+TGG | + | chr3.4:85813479-85813498 | MS.gene059347:intron | 25.0% |
| !! | TTTTTCATGTAACCAAGTTT+AGG | - | chr3.4:85812265-85812284 | None:intergenic | 25.0% |
| !!! | ATATTTGATTTGGAAGTGTA+GGG | + | chr3.4:85811477-85811496 | MS.gene059347:intron | 25.0% |
| !!! | CATTATACTATTGTTTTTGC+AGG | + | chr3.4:85812760-85812779 | MS.gene059347:intron | 25.0% |
| !!! | TATATTTGATTTGGAAGTGT+AGG | + | chr3.4:85811476-85811495 | MS.gene059347:intron | 25.0% |
| !!! | TGAAATTATTTTTCCACAAC+TGG | + | chr3.4:85813735-85813754 | MS.gene059347:intron | 25.0% |
| !!! | TTATACTATTGTTTTTGCAG+GGG | + | chr3.4:85812762-85812781 | MS.gene059347:intron | 25.0% |
| AATGAGAACATCATATCCAA+AGG | - | chr3.4:85811985-85812004 | None:intergenic | 30.0% | |
| ATATTAGAATCTAACCCAAG+AGG | - | chr3.4:85811762-85811781 | None:intergenic | 30.0% | |
| CATCAGATGTAATTTAAACC+TGG | - | chr3.4:85811889-85811908 | None:intergenic | 30.0% | |
| CATTAACACCAAACTGAATT+TGG | + | chr3.4:85812013-85812032 | MS.gene059347:intron | 30.0% | |
| GATATCACTGAATATACTTG+AGG | + | chr3.4:85811062-85811081 | MS.gene059347:intron | 30.0% | |
| GCATTTGAAAATCTTGATGA+AGG | - | chr3.4:85810672-85810691 | None:intergenic | 30.0% | |
| GGTAAAATGATACCTAAACT+TGG | + | chr3.4:85812250-85812269 | MS.gene059347:intron | 30.0% | |
| TAAAATTTCGAATGTTTCGG+CGG | - | chr3.4:85813361-85813380 | None:intergenic | 30.0% | |
| TACGATGTTAAGTCGTTTAA+TGG | + | chr3.4:85812042-85812061 | MS.gene059347:intron | 30.0% | |
| TAGCTTCTAACTTCTATACT+CGG | - | chr3.4:85813788-85813807 | None:intergenic | 30.0% | |
| TGAACAACACTTCTATTCTT+AGG | - | chr3.4:85811829-85811848 | None:intergenic | 30.0% | |
| TGCACTATTCAATTTCTATG+TGG | + | chr3.4:85811379-85811398 | MS.gene059347:intron | 30.0% | |
| TGCATGCAATATCAATGAAA+CGG | + | chr3.4:85810323-85810342 | MS.gene059347:CDS | 30.0% | |
| TTATGCTGCAAAATAGTGAA+GGG | - | chr3.4:85814185-85814204 | None:intergenic | 30.0% | |
| TTGCAGCATAAGGTAATAAA+TGG | + | chr3.4:85814194-85814213 | MS.gene059347:intron | 30.0% | |
| TTTAGCCTACTAAGAACAAA+TGG | - | chr3.4:85814080-85814099 | None:intergenic | 30.0% | |
| TTTGTTCTTAGTAGGCTAAA+CGG | + | chr3.4:85814080-85814099 | MS.gene059347:intron | 30.0% | |
| ! | TATCTTTTTATGGTGTCTGT+TGG | + | chr3.4:85811936-85811955 | MS.gene059347:intron | 30.0% |
| ! | TTTTGTATTCGATCTGTGAA+TGG | + | chr3.4:85812675-85812694 | MS.gene059347:CDS | 30.0% |
| !! | GAGATAAGTAAGACTTTTTC+TGG | - | chr3.4:85813120-85813139 | None:intergenic | 30.0% |
| !! | GTGATAAATTTTGGGTCTTT+TGG | + | chr3.4:85813669-85813688 | MS.gene059347:intron | 30.0% |
| !!! | AACTTTTTCACTTCCTACTT+AGG | + | chr3.4:85811672-85811691 | MS.gene059347:intron | 30.0% |
| !!! | AATGTTATGTTTTGGCTAAG+TGG | + | chr3.4:85811183-85811202 | MS.gene059347:intron | 30.0% |
| !!! | ACGAGAAAAAACCGTTTTTT+TGG | - | chr3.4:85812536-85812555 | None:intergenic | 30.0% |
| !!! | ACTTTTTCACTTCCTACTTA+GGG | + | chr3.4:85811673-85811692 | MS.gene059347:intron | 30.0% |
| !!! | AGAAAAAACCGTTTTTTTGG+AGG | - | chr3.4:85812533-85812552 | None:intergenic | 30.0% |
| !!! | GAAAAAACCGTTTTTTTGGA+GGG | - | chr3.4:85812532-85812551 | None:intergenic | 30.0% |
| AACGACTTAACATCGTATCT+AGG | - | chr3.4:85812039-85812058 | None:intergenic | 35.0% | |
| AAGGAAATAAAACCAGCCTT+TGG | + | chr3.4:85811966-85811985 | MS.gene059347:intron | 35.0% | |
| AGAAACTAACTATGACACAG+TGG | - | chr3.4:85812203-85812222 | None:intergenic | 35.0% | |
| AGTGGACATAATATCTATGG+AGG | - | chr3.4:85812185-85812204 | None:intergenic | 35.0% | |
| ATGCAGATTTATTTGCCTCT+TGG | + | chr3.4:85811744-85811763 | MS.gene059347:CDS | 35.0% | |
| ATGGAAATGTCTTACGATCA+GGG | - | chr3.4:85811512-85811531 | None:intergenic | 35.0% | |
| ATTCTACATACTACGAAGAG+TGG | - | chr3.4:85812309-85812328 | None:intergenic | 35.0% | |
| ATTCTATGTGTGCATTTCAC+AGG | + | chr3.4:85811858-85811877 | MS.gene059347:intron | 35.0% | |
| ATTGCCAACTTCCAACATAT+CGG | - | chr3.4:85813168-85813187 | None:intergenic | 35.0% | |
| CACAGTGGACATAATATCTA+TGG | - | chr3.4:85812188-85812207 | None:intergenic | 35.0% | |
| CCATGTATCATTGATGTCAT+CGG | - | chr3.4:85812841-85812860 | None:intergenic | 35.0% | |
| CCTACTAAGAACAAATGGAA+AGG | - | chr3.4:85814075-85814094 | None:intergenic | 35.0% | |
| CCTTTCCATTTGTTCTTAGT+AGG | + | chr3.4:85814072-85814091 | MS.gene059347:intron | 35.0% | |
| CGATGACATCAATGATACAT+GGG | + | chr3.4:85812839-85812858 | MS.gene059347:CDS | 35.0% | |
| CGTAGTATGTAGAATGTAGA+TGG | + | chr3.4:85812314-85812333 | MS.gene059347:intron | 35.0% | |
| CTTATGCTGCAAAATAGTGA+AGG | - | chr3.4:85814186-85814205 | None:intergenic | 35.0% | |
| GAAACGGTTATTAAGGAAAC+AGG | + | chr3.4:85810339-85810358 | MS.gene059347:CDS | 35.0% | |
| GAAGTCATTGCTGTAAATCA+AGG | + | chr3.4:85813390-85813409 | MS.gene059347:CDS | 35.0% | |
| GGTTATGTGTACGTCAATAT+AGG | + | chr3.4:85810891-85810910 | MS.gene059347:CDS | 35.0% | |
| TATCTAGGCCAAATTCAGTT+TGG | - | chr3.4:85812024-85812043 | None:intergenic | 35.0% | |
| TCCTTTATCAGGAAATCGTT+TGG | + | chr3.4:85813905-85813924 | MS.gene059347:CDS | 35.0% | |
| TCGATCTGTGAATGGTAATA+AGG | + | chr3.4:85812683-85812702 | MS.gene059347:intron | 35.0% | |
| TGCAGATTTATTTGCCTCTT+GGG | + | chr3.4:85811745-85811764 | MS.gene059347:CDS | 35.0% | |
| TGGAATTCATGTTTCCGTAA+GGG | + | chr3.4:85814001-85814020 | MS.gene059347:CDS | 35.0% | |
| TGTGACTATAACAGCATCAT+GGG | + | chr3.4:85813959-85813978 | MS.gene059347:CDS | 35.0% | |
| TTCAAGCTTGACAAGTCTTA+TGG | + | chr3.4:85810384-85810403 | MS.gene059347:intron | 35.0% | |
| TTCCTCATCCAATTGAAAGT+CGG | - | chr3.4:85811140-85811159 | None:intergenic | 35.0% | |
| TTGGCATATATTCTGATGCT+GGG | + | chr3.4:85811580-85811599 | MS.gene059347:CDS | 35.0% | |
| TTGTGACTATAACAGCATCA+TGG | + | chr3.4:85813958-85813977 | MS.gene059347:CDS | 35.0% | |
| TTGTGCAAAGATGATCTTCT+TGG | + | chr3.4:85812132-85812151 | MS.gene059347:intron | 35.0% | |
| TTTACGACCAGTTTCATTGA+GGG | - | chr3.4:85812654-85812673 | None:intergenic | 35.0% | |
| ! | CTTCACTATTTTGCAGCATA+AGG | + | chr3.4:85814184-85814203 | MS.gene059347:intron | 35.0% |
| ! | GGATCAATTTTCCACGAAAA+TGG | + | chr3.4:85811719-85811738 | MS.gene059347:CDS | 35.0% |
| ! | TTTGCGGTTATGTATTTCTG+TGG | + | chr3.4:85812421-85812440 | MS.gene059347:intron | 35.0% |
| ! | TTTTACGACCAGTTTCATTG+AGG | - | chr3.4:85812655-85812674 | None:intergenic | 35.0% |
| ! | TTTTCGTGGAAAATTGATCC+TGG | - | chr3.4:85811719-85811738 | None:intergenic | 35.0% |
| !!! | GGTGTCTGTTGGATTTTTTA+AGG | + | chr3.4:85811947-85811966 | MS.gene059347:intron | 35.0% |
| AATAAGTGTATGGCCAGTTG+TGG | - | chr3.4:85813751-85813770 | None:intergenic | 40.0% | |
| ACATAATATCTATGGAGGCC+TGG | - | chr3.4:85812180-85812199 | None:intergenic | 40.0% | |
| ACATCAATGATACATGGGCA+AGG | + | chr3.4:85812844-85812863 | MS.gene059347:CDS | 40.0% | |
| ACATCGCAACCAATCAAAAG+AGG | - | chr3.4:85813327-85813346 | None:intergenic | 40.0% | |
| ACTACGAGCTTGAAGTATGT+TGG | + | chr3.4:85813845-85813864 | MS.gene059347:intron | 40.0% | |
| AGAACATCATATCCAAAGGC+TGG | - | chr3.4:85811981-85812000 | None:intergenic | 40.0% | |
| AGTTAGAAGCTAGTCCAAAC+TGG | + | chr3.4:85813796-85813815 | MS.gene059347:intron | 40.0% | |
| ATGTTTCCGTAAGGGATTTG+TGG | + | chr3.4:85814009-85814028 | MS.gene059347:CDS | 40.0% | |
| ATTTATTTACAGGTCTGGGC+AGG | + | chr3.4:85813882-85813901 | MS.gene059347:intron | 40.0% | |
| CAAAAAACACACCAGCACAT+CGG | - | chr3.4:85811301-85811320 | None:intergenic | 40.0% | |
| CAACTTGAACTTTCCTTCCT+TGG | - | chr3.4:85813591-85813610 | None:intergenic | 40.0% | |
| CAGATACTCTTTATGTGTCC+TGG | + | chr3.4:85811790-85811809 | MS.gene059347:intron | 40.0% | |
| CAGCACAACTCAAAAGGAAA+CGG | + | chr3.4:85812229-85812248 | MS.gene059347:intron | 40.0% | |
| CATAATATCTATGGAGGCCT+GGG | - | chr3.4:85812179-85812198 | None:intergenic | 40.0% | |
| CATCTTAGTGACTTATCTCG+AGG | + | chr3.4:85812364-85812383 | MS.gene059347:intron | 40.0% | |
| CCATCTAAAAGTCAAAGTCC+AGG | - | chr3.4:85812877-85812896 | None:intergenic | 40.0% | |
| CCGATGACATCAATGATACA+TGG | + | chr3.4:85812838-85812857 | MS.gene059347:CDS | 40.0% | |
| CTGGAATTCATGTTTCCGTA+AGG | + | chr3.4:85814000-85814019 | MS.gene059347:CDS | 40.0% | |
| CTTGGCATATATTCTGATGC+TGG | + | chr3.4:85811579-85811598 | MS.gene059347:CDS | 40.0% | |
| GACATGTAAAAGCCCTAAGT+AGG | - | chr3.4:85811688-85811707 | None:intergenic | 40.0% | |
| GATATGTTGGAAGTTGGCAA+TGG | + | chr3.4:85813167-85813186 | MS.gene059347:CDS | 40.0% | |
| GATCGTAAGACATTTCCATC+AGG | + | chr3.4:85811513-85811532 | MS.gene059347:CDS | 40.0% | |
| GATGGAAATGTCTTACGATC+AGG | - | chr3.4:85811513-85811532 | None:intergenic | 40.0% | |
| GCCAAACGATTTCCTGATAA+AGG | - | chr3.4:85813909-85813928 | None:intergenic | 40.0% | |
| TAGAAGCAGCACAACTCAAA+AGG | + | chr3.4:85812223-85812242 | MS.gene059347:intron | 40.0% | |
| TCCTCATCCAATTGAAAGTC+GGG | - | chr3.4:85811139-85811158 | None:intergenic | 40.0% | |
| TGCTGATCTTAATGACCGAT+GGG | + | chr3.4:85813020-85813039 | MS.gene059347:CDS | 40.0% | |
| TGGAATAGATGGTTGTAGTC+AGG | + | chr3.4:85813612-85813631 | MS.gene059347:CDS | 40.0% | |
| TGTCTATCCCGACTTTCAAT+TGG | + | chr3.4:85811129-85811148 | MS.gene059347:intron | 40.0% | |
| TTGCCAACTTCCAACATATC+GGG | - | chr3.4:85813167-85813186 | None:intergenic | 40.0% | |
| TTGCTGATCTTAATGACCGA+TGG | + | chr3.4:85813019-85813038 | MS.gene059347:CDS | 40.0% | |
| ! | AATCTGCATCACCATTTTCG+TGG | - | chr3.4:85811733-85811752 | None:intergenic | 40.0% |
| ! | CTTGGAACTTCACACTTTTG+CGG | + | chr3.4:85812150-85812169 | MS.gene059347:intron | 40.0% |
| ! | TTGTGGCAGGTAATTTTGCT+TGG | + | chr3.4:85814026-85814045 | MS.gene059347:intron | 40.0% |
| !! | ATGATTTGGTGTCGTGTAGA+TGG | + | chr3.4:85810283-85810302 | MS.gene059347:intron | 40.0% |
| !! | CCTGGACTTTGACTTTTAGA+TGG | + | chr3.4:85812874-85812893 | MS.gene059347:intron | 40.0% |
| !! | CGTCAATATAGGTACTGATC+TGG | + | chr3.4:85810902-85810921 | MS.gene059347:intron | 40.0% |
| !! | GTTCAAGTTGCTGGAATAGA+TGG | + | chr3.4:85813601-85813620 | MS.gene059347:CDS | 40.0% |
| ACTTTATGCATCCGATGTGC+TGG | + | chr3.4:85811287-85811306 | MS.gene059347:intron | 45.0% | |
| AGTTGGGCAAAGATCCAGTT+TGG | - | chr3.4:85813813-85813832 | None:intergenic | 45.0% | |
| ATCACGCATAGGTGGATATC+TGG | - | chr3.4:85812630-85812649 | None:intergenic | 45.0% | |
| ATCGTTTGGCTGTTGCTCTT+TGG | + | chr3.4:85813919-85813938 | MS.gene059347:CDS | 45.0% | |
| ATGTGTCCTGGACTTTGTAG+AGG | + | chr3.4:85811802-85811821 | MS.gene059347:intron | 45.0% | |
| ATGTTGGAAGTTGGCAATGG+TGG | + | chr3.4:85813170-85813189 | MS.gene059347:CDS | 45.0% | |
| CATGGGCAAGGTTAAAATCC+TGG | + | chr3.4:85812856-85812875 | MS.gene059347:intron | 45.0% | |
| CGTGGAAAATTGATCCTGGT+CGG | - | chr3.4:85811715-85811734 | None:intergenic | 45.0% | |
| CTGCTTAGAGCAGTTTCGTA+TGG | - | chr3.4:85814052-85814071 | None:intergenic | 45.0% | |
| GACGTACACATAACCCAACT+TGG | - | chr3.4:85810886-85810905 | None:intergenic | 45.0% | |
| GATTGTGAACTTGTGTGTGC+AGG | + | chr3.4:85813299-85813318 | MS.gene059347:intron | 45.0% | |
| GCAAGTGCTTTGATTCCTGA+TGG | - | chr3.4:85811531-85811550 | None:intergenic | 45.0% | |
| GCAGAGTAAGATGCTGTAGA+TGG | - | chr3.4:85814284-85814303 | None:intergenic | 45.0% | |
| TACAATGTGCAGACGATTGC+TGG | + | chr3.4:85810992-85811011 | MS.gene059347:intron | 45.0% | |
| TACCTGCCACAAATCCCTTA+CGG | - | chr3.4:85814018-85814037 | None:intergenic | 45.0% | |
| TCCCGACTTTCAATTGGATG+AGG | + | chr3.4:85811135-85811154 | MS.gene059347:intron | 45.0% | |
| TCCCTTCCCATGGACATAAT+CGG | - | chr3.4:85811553-85811572 | None:intergenic | 45.0% | |
| TCGGCATCCCTCCAAAAAAA+CGG | + | chr3.4:85812522-85812541 | MS.gene059347:CDS | 45.0% | |
| TGCCAACTTCCAACATATCG+GGG | - | chr3.4:85813166-85813185 | None:intergenic | 45.0% | |
| TGTTGACGATCCTGCTCTAT+GGG | + | chr3.4:85812785-85812804 | MS.gene059347:CDS | 45.0% | |
| TTAGGACCTCTACAAAGTCC+AGG | - | chr3.4:85811811-85811830 | None:intergenic | 45.0% | |
| TTTACATGTCAAGTCCGACC+AGG | + | chr3.4:85811698-85811717 | MS.gene059347:CDS | 45.0% | |
| ! | CACTTGCCGATTATGTCCAT+GGG | + | chr3.4:85811544-85811563 | MS.gene059347:CDS | 45.0% |
| ! | CAGCATATGGGCTTTAGCAA+AGG | + | chr3.4:85813223-85813242 | MS.gene059347:CDS | 45.0% |
| ! | TGCACTGGTATCAACTGGAT+TGG | + | chr3.4:85810860-85810879 | MS.gene059347:CDS | 45.0% |
| !! | ACTTATCTCGAGGCGCTTTT+CGG | + | chr3.4:85812374-85812393 | MS.gene059347:intron | 45.0% |
| !! | ATCAACTGGATTGGCCAAGT+TGG | + | chr3.4:85810869-85810888 | MS.gene059347:CDS | 45.0% |
| !! | CAGGCACAGTTGGTAATAGT+TGG | + | chr3.4:85812808-85812827 | MS.gene059347:CDS | 45.0% |
| !! | GGAAGGAAAGTTCAAGTTGC+TGG | + | chr3.4:85813592-85813611 | MS.gene059347:CDS | 45.0% |
| !! | TCAACTGGATTGGCCAAGTT+GGG | + | chr3.4:85810870-85810889 | MS.gene059347:CDS | 45.0% |
| AACAGTGTCTAGCGCGTAGA+TGG | + | chr3.4:85810585-85810604 | MS.gene059347:intron | 50.0% | |
| AATCAAGGTCTCACCACCCT+TGG | + | chr3.4:85813405-85813424 | MS.gene059347:intron | 50.0% | |
| ACCGTGCTCACTTCAGCATA+TGG | + | chr3.4:85813210-85813229 | MS.gene059347:CDS | 50.0% | |
| ACTCACTTGGAGTCCAAGGA+AGG | + | chr3.4:85813575-85813594 | MS.gene059347:CDS | 50.0% | |
| ATACCAGTGCATCAGCTGCA+AGG | - | chr3.4:85810851-85810870 | None:intergenic | 50.0% | |
| ATGTCTTACGATCAGGGACC+AGG | - | chr3.4:85811506-85811525 | None:intergenic | 50.0% | |
| CAATGGTGGCATGACTTACC+AGG | + | chr3.4:85813184-85813203 | MS.gene059347:CDS | 50.0% | |
| CCCATATGCTGAAGTGAGCA+CGG | - | chr3.4:85813214-85813233 | None:intergenic | 50.0% | |
| CCGTGCTCACTTCAGCATAT+GGG | + | chr3.4:85813211-85813230 | MS.gene059347:CDS | 50.0% | |
| CGTGATGCCCTCAATGAAAC+TGG | + | chr3.4:85812644-85812663 | MS.gene059347:CDS | 50.0% | |
| GACCCCGATATGTTGGAAGT+TGG | + | chr3.4:85813161-85813180 | MS.gene059347:intron | 50.0% | |
| GCCGATTATGTCCATGGGAA+GGG | + | chr3.4:85811549-85811568 | MS.gene059347:CDS | 50.0% | |
| TATCCTTGCAGCTGATGCAC+TGG | + | chr3.4:85810845-85810864 | MS.gene059347:intron | 50.0% | |
| TGAAGTGAGCACGGTATTCC+TGG | - | chr3.4:85813205-85813224 | None:intergenic | 50.0% | |
| TGCATTTCACAGGTTACGCC+AGG | + | chr3.4:85811868-85811887 | MS.gene059347:intron | 50.0% | |
| TGTCGTGTAGATGGAACAGC+TGG | + | chr3.4:85810292-85810311 | MS.gene059347:intron | 50.0% | |
| TGTCTCTCTGCAGACTCACT+TGG | + | chr3.4:85813562-85813581 | MS.gene059347:intron | 50.0% | |
| TTCCGTAAGGGATTTGTGGC+AGG | + | chr3.4:85814013-85814032 | MS.gene059347:CDS | 50.0% | |
| TTCGACAGACCCCGATATGT+TGG | + | chr3.4:85813154-85813173 | MS.gene059347:intron | 50.0% | |
| ! | GCACTTGCCGATTATGTCCA+TGG | + | chr3.4:85811543-85811562 | MS.gene059347:CDS | 50.0% |
| ! | GCTGATGCACTGGTATCAAC+TGG | + | chr3.4:85810855-85810874 | MS.gene059347:intron | 50.0% |
| ! | GTGCAGGCTCCTCTTTTGAT+TGG | + | chr3.4:85813315-85813334 | MS.gene059347:intron | 50.0% |
| ! | GTGTTGACGATCCTGCTCTA+TGG | + | chr3.4:85812784-85812803 | MS.gene059347:CDS | 50.0% |
| ! | TGCCGATTATGTCCATGGGA+AGG | + | chr3.4:85811548-85811567 | MS.gene059347:CDS | 50.0% |
| ! | TTTGGAAGTGTAGGGTGACC+TGG | + | chr3.4:85811485-85811504 | MS.gene059347:intron | 50.0% |
| !! | TCATTGAGGGCATCACGCAT+AGG | - | chr3.4:85812641-85812660 | None:intergenic | 50.0% |
| ACAGCATCATGGGCAGCACT+CGG | + | chr3.4:85813969-85813988 | MS.gene059347:CDS | 55.0% | |
| ACCATTCCATCCTCCAGGAC+CGG | - | chr3.4:85813055-85813074 | None:intergenic | 55.0% | |
| CAAGCTTGAGTCCCTTCCCA+TGG | - | chr3.4:85811563-85811582 | None:intergenic | 55.0% | |
| CATGGGAAGGGACTCAAGCT+TGG | + | chr3.4:85811561-85811580 | MS.gene059347:CDS | 55.0% | |
| GCAGACTCACTTGGAGTCCA+AGG | + | chr3.4:85813571-85813590 | MS.gene059347:intron | 55.0% | |
| GGTGTACCATTCCATCCTCC+AGG | - | chr3.4:85813060-85813079 | None:intergenic | 55.0% | |
| GTCTGGGCAGGTCCTTTATC+AGG | + | chr3.4:85813894-85813913 | MS.gene059347:CDS | 55.0% | |
| ! | TCACACTTTTGCGGTGACCC+AGG | + | chr3.4:85812159-85812178 | MS.gene059347:intron | 55.0% |
| !! | TTGAGGGCATCACGCATAGG+TGG | - | chr3.4:85812638-85812657 | None:intergenic | 55.0% |
| ACTGTGCCTGCCCATAGAGC+AGG | - | chr3.4:85812798-85812817 | None:intergenic | 60.0% | |
| CAGCATCATGGGCAGCACTC+GGG | + | chr3.4:85813970-85813989 | MS.gene059347:CDS | 60.0% | |
| CATATGCCGGTCCTGGAGGA+TGG | + | chr3.4:85813046-85813065 | MS.gene059347:CDS | 60.0% | |
| GACCGGCATATGCAGCCCAT+CGG | - | chr3.4:85813038-85813057 | None:intergenic | 60.0% | |
| GACGATCCTGCTCTATGGGC+AGG | + | chr3.4:85812789-85812808 | MS.gene059347:CDS | 60.0% | |
| GCAGCACTCGGGCTTGAATC+TGG | + | chr3.4:85813981-85814000 | MS.gene059347:CDS | 60.0% | |
| GCTCTATGGGCAGGCACAGT+TGG | + | chr3.4:85812798-85812817 | MS.gene059347:CDS | 60.0% | |
| !! | GACCGATGGGCTGCATATGC+CGG | + | chr3.4:85813033-85813052 | MS.gene059347:CDS | 60.0% |
| GCCGGTCCTGGAGGATGGAA+TGG | + | chr3.4:85813051-85813070 | MS.gene059347:CDS | 65.0% | |
| GCTGCATATGCCGGTCCTGG+AGG | + | chr3.4:85813042-85813061 | MS.gene059347:CDS | 65.0% | |
| TGGGCTGCATATGCCGGTCC+TGG | + | chr3.4:85813039-85813058 | MS.gene059347:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 85810146 | 85814310 | 85810146 | ID=MS.gene059347 |
| chr3.4 | mRNA | 85810146 | 85814310 | 85810146 | ID=MS.gene059347.t1;Parent=MS.gene059347 |
| chr3.4 | exon | 85810146 | 85810150 | 85810146 | ID=MS.gene059347.t1.exon1;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85810146 | 85810150 | 85810146 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85810302 | 85810360 | 85810302 | ID=MS.gene059347.t1.exon2;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85810302 | 85810360 | 85810302 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85810856 | 85810912 | 85810856 | ID=MS.gene059347.t1.exon3;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85810856 | 85810912 | 85810856 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85811004 | 85811038 | 85811004 | ID=MS.gene059347.t1.exon4;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85811004 | 85811038 | 85811004 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85811498 | 85811601 | 85811498 | ID=MS.gene059347.t1.exon5;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85811498 | 85811601 | 85811498 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85811694 | 85811766 | 85811694 | ID=MS.gene059347.t1.exon6;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85811694 | 85811766 | 85811694 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85812485 | 85812543 | 85812485 | ID=MS.gene059347.t1.exon7;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85812485 | 85812543 | 85812485 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85812631 | 85812696 | 85812631 | ID=MS.gene059347.t1.exon8;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85812631 | 85812696 | 85812631 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85812782 | 85812865 | 85812782 | ID=MS.gene059347.t1.exon9;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85812782 | 85812865 | 85812782 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85813008 | 85813072 | 85813008 | ID=MS.gene059347.t1.exon10;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85813008 | 85813072 | 85813008 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85813162 | 85813244 | 85813162 | ID=MS.gene059347.t1.exon11;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85813162 | 85813244 | 85813162 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85813321 | 85813411 | 85813321 | ID=MS.gene059347.t1.exon12;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85813321 | 85813411 | 85813321 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85813575 | 85813633 | 85813575 | ID=MS.gene059347.t1.exon13;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85813575 | 85813633 | 85813575 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85813894 | 85814034 | 85813894 | ID=MS.gene059347.t1.exon14;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85813894 | 85814034 | 85813894 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| chr3.4 | exon | 85814200 | 85814310 | 85814200 | ID=MS.gene059347.t1.exon15;Parent=MS.gene059347.t1 |
| chr3.4 | CDS | 85814200 | 85814310 | 85814200 | ID=cds.MS.gene059347.t1;Parent=MS.gene059347.t1 |
| Gene Sequence |
| Protein sequence |
