Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013419.t1 | XP_013461524.1 | 97.2 | 362 | 10 | 0 | 1 | 362 | 71 | 432 | 4.00E-189 | 670.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013419.t1 | Q8VXZ7 | 73.4 | 361 | 96 | 0 | 1 | 361 | 75 | 435 | 2.3e-153 | 543.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013419.t1 | A0A072V0K8 | 97.2 | 362 | 10 | 0 | 1 | 362 | 71 | 432 | 2.9e-189 | 670.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013419.t1 | MTR_3g094160 | 97.238 | 362 | 10 | 0 | 1 | 362 | 71 | 432 | 0.0 | 735 |
| MS.gene013419.t1 | MTR_1g077520 | 63.128 | 358 | 127 | 3 | 1 | 357 | 56 | 409 | 3.52e-174 | 491 |
| MS.gene013419.t1 | MTR_1g077480 | 63.510 | 359 | 120 | 4 | 1 | 355 | 60 | 411 | 5.64e-171 | 483 |
| MS.gene013419.t1 | MTR_6g069140 | 63.611 | 360 | 120 | 4 | 1 | 356 | 68 | 420 | 1.23e-169 | 479 |
| MS.gene013419.t1 | MTR_6g086625 | 62.674 | 359 | 123 | 4 | 1 | 355 | 54 | 405 | 1.76e-169 | 479 |
| MS.gene013419.t1 | MTR_6g086575 | 62.360 | 356 | 129 | 3 | 1 | 355 | 53 | 404 | 4.12e-169 | 478 |
| MS.gene013419.t1 | MTR_7g073650 | 62.745 | 357 | 128 | 3 | 1 | 355 | 53 | 406 | 2.47e-163 | 463 |
| MS.gene013419.t1 | MTR_7g073640 | 62.185 | 357 | 130 | 3 | 1 | 355 | 54 | 407 | 8.08e-162 | 459 |
| MS.gene013419.t1 | MTR_1g077520 | 68.750 | 272 | 84 | 1 | 1 | 271 | 56 | 327 | 2.08e-146 | 417 |
| MS.gene013419.t1 | MTR_1g078410 | 49.697 | 165 | 60 | 4 | 16 | 176 | 39 | 184 | 1.63e-41 | 144 |
| MS.gene013419.t1 | MTR_0279s0030 | 53.175 | 126 | 55 | 2 | 231 | 355 | 101 | 223 | 1.72e-38 | 137 |
| MS.gene013419.t1 | MTR_0279s0030 | 53.175 | 126 | 55 | 2 | 231 | 355 | 185 | 307 | 1.73e-37 | 137 |
| MS.gene013419.t1 | MTR_0279s0030 | 53.175 | 126 | 55 | 2 | 231 | 355 | 250 | 372 | 1.33e-36 | 136 |
| MS.gene013419.t1 | MTR_3g094180 | 87.879 | 66 | 8 | 0 | 261 | 326 | 4 | 69 | 7.80e-33 | 118 |
| MS.gene013419.t1 | MTR_8g089725 | 23.226 | 465 | 241 | 17 | 2 | 353 | 41 | 502 | 2.41e-17 | 83.6 |
| MS.gene013419.t1 | MTR_8g089735 | 23.226 | 465 | 241 | 17 | 2 | 353 | 41 | 502 | 2.71e-17 | 83.6 |
| MS.gene013419.t1 | MTR_8g089745 | 25.648 | 347 | 170 | 12 | 2 | 262 | 41 | 385 | 4.70e-17 | 82.8 |
| MS.gene013419.t1 | MTR_8g089745 | 25.648 | 347 | 170 | 12 | 2 | 262 | 41 | 385 | 5.26e-17 | 82.8 |
| MS.gene013419.t1 | MTR_3g086580 | 25.071 | 351 | 166 | 12 | 2 | 259 | 43 | 389 | 5.51e-17 | 82.8 |
| MS.gene013419.t1 | MTR_8g089740 | 26.000 | 350 | 166 | 12 | 2 | 262 | 36 | 381 | 1.41e-16 | 81.6 |
| MS.gene013419.t1 | MTR_2g096530 | 24.638 | 345 | 171 | 10 | 2 | 259 | 43 | 385 | 3.17e-16 | 80.5 |
| MS.gene013419.t1 | MTR_3g086580 | 26.966 | 178 | 103 | 5 | 108 | 259 | 26 | 202 | 2.37e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013419.t1 | AT3G56310 | 77.839 | 361 | 80 | 0 | 1 | 361 | 75 | 435 | 0.0 | 608 |
| MS.gene013419.t1 | AT3G56310 | 73.961 | 361 | 70 | 1 | 1 | 361 | 75 | 411 | 0.0 | 564 |
| MS.gene013419.t1 | AT5G08370 | 64.067 | 359 | 124 | 3 | 1 | 358 | 16 | 370 | 7.78e-171 | 481 |
| MS.gene013419.t1 | AT5G08370 | 64.067 | 359 | 124 | 3 | 1 | 358 | 42 | 396 | 9.27e-171 | 481 |
| MS.gene013419.t1 | AT5G08380 | 61.798 | 356 | 132 | 2 | 1 | 355 | 56 | 408 | 2.06e-164 | 466 |
| MS.gene013419.t1 | AT5G08380 | 68.582 | 261 | 81 | 1 | 1 | 260 | 56 | 316 | 4.03e-134 | 385 |
| MS.gene013419.t1 | AT3G26380 | 24.713 | 348 | 173 | 11 | 2 | 262 | 45 | 390 | 2.35e-18 | 86.7 |
| MS.gene013419.t1 | AT3G26380 | 24.638 | 345 | 171 | 11 | 2 | 259 | 45 | 387 | 3.34e-18 | 86.7 |
Find 99 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGTGACAAGAAATTTAA+AGG | 0.225462 | 3.3:+78356702 | MS.gene013419:CDS |
| TATCAATGAAACGGTTATTA+AGG | 0.252370 | 3.3:+78356017 | MS.gene013419:CDS |
| TTGCAGCATAAGGTAATAAA+TGG | 0.260118 | 3.3:+78359879 | MS.gene013419:intron |
| CAACTTGAACTTTCCTTCCT+TGG | 0.282948 | 3.3:-78359273 | None:intergenic |
| ATCGTTTGGCTGTTGCTCTT+TGG | 0.288869 | 3.3:+78359604 | MS.gene013419:CDS |
| TGCAGATTTATTTGCCTCTT+GGG | 0.323327 | 3.3:+78357430 | MS.gene013419:CDS |
| TACAATGTGCAGACGATTGC+TGG | 0.329309 | 3.3:+78356677 | MS.gene013419:intron |
| ATGCAGATTTATTTGCCTCT+TGG | 0.342982 | 3.3:+78357429 | MS.gene013419:CDS |
| GCTTAAAATTTCGAATGTTT+CGG | 0.347419 | 3.3:-78359046 | None:intergenic |
| GCAGCACTCGGGCTTGAATC+TGG | 0.357456 | 3.3:+78359666 | MS.gene013419:CDS |
| GTTCAAGTTGCTGGAATAGA+TGG | 0.358856 | 3.3:+78359286 | MS.gene013419:CDS |
| TGAAGTGAGCACGGTATTCC+TGG | 0.364079 | 3.3:-78358887 | None:intergenic |
| GTGTTGACGATCCTGCTCTA+TGG | 0.368509 | 3.3:+78358469 | MS.gene013419:CDS |
| GCCAAACGATTTCCTGATAA+AGG | 0.371429 | 3.3:-78359591 | None:intergenic |
| GTCTGGGCAGGTCCTTTATC+AGG | 0.376851 | 3.3:+78359579 | MS.gene013419:CDS |
| GGAAGGAAAGTTCAAGTTGC+TGG | 0.382276 | 3.3:+78359277 | MS.gene013419:CDS |
| ATTGCCAACTTCCAACATAT+CGG | 0.393715 | 3.3:-78358850 | None:intergenic |
| GAAACGGTTATTAAGGAAAC+AGG | 0.397519 | 3.3:+78356024 | MS.gene013419:CDS |
| TCCTTTATCAGGAAATCGTT+TGG | 0.403234 | 3.3:+78359590 | MS.gene013419:CDS |
| ACCGTGCTCACTTCAGCATA+TGG | 0.411756 | 3.3:+78358895 | MS.gene013419:CDS |
| TGGGCTGCATATGCCGGTCC+TGG | 0.417041 | 3.3:+78358724 | MS.gene013419:CDS |
| GATGGAAATGTCTTACGATC+AGG | 0.434606 | 3.3:-78357195 | None:intergenic |
| TCAACTGGATTGGCCAAGTT+GGG | 0.435322 | 3.3:+78356555 | MS.gene013419:CDS |
| GGTTATGTGTACGTCAATAT+AGG | 0.436209 | 3.3:+78356576 | MS.gene013419:CDS |
| TCCCTTCCCATGGACATAAT+CGG | 0.441983 | 3.3:-78357235 | None:intergenic |
| TTGCCAACTTCCAACATATC+GGG | 0.455011 | 3.3:-78358849 | None:intergenic |
| CCGATGACATCAATGATACA+TGG | 0.456542 | 3.3:+78358523 | MS.gene013419:CDS |
| GCTGATGCACTGGTATCAAC+TGG | 0.468770 | 3.3:+78356540 | MS.gene013419:intron |
| CAGGCACAGTTGGTAATAGT+TGG | 0.471145 | 3.3:+78358493 | MS.gene013419:CDS |
| GACCGATGGGCTGCATATGC+CGG | 0.472336 | 3.3:+78358718 | MS.gene013419:CDS |
| GCTCTATGGGCAGGCACAGT+TGG | 0.473297 | 3.3:+78358483 | MS.gene013419:CDS |
| CGTGATGCCCTCAATGAAAC+TGG | 0.473669 | 3.3:+78358329 | MS.gene013419:CDS |
| TTCCGTAAGGGATTTGTGGC+AGG | 0.476633 | 3.3:+78359698 | MS.gene013419:CDS |
| GAAGTCATTGCTGTAAATCA+AGG | 0.478784 | 3.3:+78359075 | MS.gene013419:CDS |
| ATGTTTCCGTAAGGGATTTG+TGG | 0.481338 | 3.3:+78359694 | MS.gene013419:CDS |
| GCAGAGTAAGATGCTGTAGA+TGG | 0.482664 | 3.3:-78359966 | None:intergenic |
| TGTCTCTCTGCAGACTCACT+TGG | 0.485221 | 3.3:+78359247 | MS.gene013419:intron |
| CAATGGTGGCATGACTTACC+AGG | 0.490618 | 3.3:+78358869 | MS.gene013419:CDS |
| TGCATGCAATATCAATGAAA+CGG | 0.491799 | 3.3:+78356008 | MS.gene013419:CDS |
| TTTACGACCAGTTTCATTGA+GGG | 0.492041 | 3.3:-78358336 | None:intergenic |
| TGTTGACGATCCTGCTCTAT+GGG | 0.493096 | 3.3:+78358470 | MS.gene013419:CDS |
| GACGATCCTGCTCTATGGGC+AGG | 0.495630 | 3.3:+78358474 | MS.gene013419:CDS |
| ATCAACTGGATTGGCCAAGT+TGG | 0.496099 | 3.3:+78356554 | MS.gene013419:CDS |
| TGGAATAGATGGTTGTAGTC+AGG | 0.503086 | 3.3:+78359297 | MS.gene013419:CDS |
| GCACTTGCCGATTATGTCCA+TGG | 0.503218 | 3.3:+78357228 | MS.gene013419:CDS |
| CCGTGCTCACTTCAGCATAT+GGG | 0.507268 | 3.3:+78358896 | MS.gene013419:CDS |
| ATGTCTTACGATCAGGGACC+AGG | 0.511454 | 3.3:-78357188 | None:intergenic |
| TATGACAATTGTTACAATCT+CGG | 0.512184 | 3.3:+78358188 | MS.gene013419:CDS |
| TTCGACAGACCCCGATATGT+TGG | 0.518184 | 3.3:+78358839 | MS.gene013419:intron |
| CATATGCCGGTCCTGGAGGA+TGG | 0.519568 | 3.3:+78358731 | MS.gene013419:CDS |
| TTGCTGATCTTAATGACCGA+TGG | 0.521286 | 3.3:+78358704 | MS.gene013419:CDS |
| TACCTGCCACAAATCCCTTA+CGG | 0.521890 | 3.3:-78359700 | None:intergenic |
| CTGGAATTCATGTTTCCGTA+AGG | 0.522101 | 3.3:+78359685 | MS.gene013419:CDS |
| CGTGGAAAATTGATCCTGGT+CGG | 0.524701 | 3.3:-78357397 | None:intergenic |
| ATTTATTTACAGGTCTGGGC+AGG | 0.524714 | 3.3:+78359567 | MS.gene013419:intron |
| GCCGATTATGTCCATGGGAA+GGG | 0.529046 | 3.3:+78357234 | MS.gene013419:CDS |
| TTGTGACTATAACAGCATCA+TGG | 0.531411 | 3.3:+78359643 | MS.gene013419:CDS |
| TATCCTTGCAGCTGATGCAC+TGG | 0.533289 | 3.3:+78356530 | MS.gene013419:intron |
| GCAAGTGCTTTGATTCCTGA+TGG | 0.533880 | 3.3:-78357213 | None:intergenic |
| CTTGGCATATATTCTGATGC+TGG | 0.535596 | 3.3:+78357264 | MS.gene013419:CDS |
| CATGGGAAGGGACTCAAGCT+TGG | 0.538301 | 3.3:+78357246 | MS.gene013419:CDS |
| GGTGTACCATTCCATCCTCC+AGG | 0.542408 | 3.3:-78358742 | None:intergenic |
| ACAGCATCATGGGCAGCACT+CGG | 0.542560 | 3.3:+78359654 | MS.gene013419:CDS |
| GACGTACACATAACCCAACT+TGG | 0.542647 | 3.3:-78356568 | None:intergenic |
| ACCATTCCATCCTCCAGGAC+CGG | 0.542782 | 3.3:-78358737 | None:intergenic |
| GCCGGTCCTGGAGGATGGAA+TGG | 0.543310 | 3.3:+78358736 | MS.gene013419:CDS |
| CAGCATATGGGCTTTAGCAA+AGG | 0.544487 | 3.3:+78358908 | MS.gene013419:CDS |
| TGGAATTCATGTTTCCGTAA+GGG | 0.545353 | 3.3:+78359686 | MS.gene013419:CDS |
| GCAGACTCACTTGGAGTCCA+AGG | 0.547998 | 3.3:+78359256 | MS.gene013419:intron |
| GATCGTAAGACATTTCCATC+AGG | 0.548086 | 3.3:+78357198 | MS.gene013419:CDS |
| TGCTGATCTTAATGACCGAT+GGG | 0.548796 | 3.3:+78358705 | MS.gene013419:CDS |
| ACTGTGCCTGCCCATAGAGC+AGG | 0.551108 | 3.3:-78358480 | None:intergenic |
| GACCCCGATATGTTGGAAGT+TGG | 0.558301 | 3.3:+78358846 | MS.gene013419:intron |
| TGTGACTATAACAGCATCAT+GGG | 0.560594 | 3.3:+78359644 | MS.gene013419:CDS |
| ACATCGCAACCAATCAAAAG+AGG | 0.562580 | 3.3:-78359009 | None:intergenic |
| TTGGCATATATTCTGATGCT+GGG | 0.564745 | 3.3:+78357265 | MS.gene013419:CDS |
| ATGGAAATGTCTTACGATCA+GGG | 0.566931 | 3.3:-78357194 | None:intergenic |
| TTTGGAAGTGTAGGGTGACC+TGG | 0.567490 | 3.3:+78357170 | MS.gene013419:intron |
| CAGCATCATGGGCAGCACTC+GGG | 0.569334 | 3.3:+78359655 | MS.gene013419:CDS |
| CCATGTATCATTGATGTCAT+CGG | 0.571669 | 3.3:-78358523 | None:intergenic |
| TGCCGATTATGTCCATGGGA+AGG | 0.578023 | 3.3:+78357233 | MS.gene013419:CDS |
| TGCACTGGTATCAACTGGAT+TGG | 0.584252 | 3.3:+78356545 | MS.gene013419:CDS |
| GACCGGCATATGCAGCCCAT+CGG | 0.586985 | 3.3:-78358720 | None:intergenic |
| TTTACATGTCAAGTCCGACC+AGG | 0.587998 | 3.3:+78357383 | MS.gene013419:CDS |
| CACTTGCCGATTATGTCCAT+GGG | 0.592383 | 3.3:+78357229 | MS.gene013419:CDS |
| CCCATATGCTGAAGTGAGCA+CGG | 0.599322 | 3.3:-78358896 | None:intergenic |
| TCATTGAGGGCATCACGCAT+AGG | 0.600581 | 3.3:-78358323 | None:intergenic |
| ACTCACTTGGAGTCCAAGGA+AGG | 0.601676 | 3.3:+78359260 | MS.gene013419:CDS |
| TTGAGGGCATCACGCATAGG+TGG | 0.611936 | 3.3:-78358320 | None:intergenic |
| CGATGACATCAATGATACAT+GGG | 0.614007 | 3.3:+78358524 | MS.gene013419:CDS |
| ATGTTGGAAGTTGGCAATGG+TGG | 0.621869 | 3.3:+78358855 | MS.gene013419:CDS |
| TGTCGTGTAGATGGAACAGC+TGG | 0.624032 | 3.3:+78355977 | MS.gene013419:intron |
| CAAGCTTGAGTCCCTTCCCA+TGG | 0.642664 | 3.3:-78357245 | None:intergenic |
| ACATCAATGATACATGGGCA+AGG | 0.643423 | 3.3:+78358529 | MS.gene013419:CDS |
| TGCCAACTTCCAACATATCG+GGG | 0.658114 | 3.3:-78358848 | None:intergenic |
| TAAAATTTCGAATGTTTCGG+CGG | 0.663405 | 3.3:-78359043 | None:intergenic |
| ATATTAGAATCTAACCCAAG+AGG | 0.678750 | 3.3:-78357444 | None:intergenic |
| GATATGTTGGAAGTTGGCAA+TGG | 0.679682 | 3.3:+78358852 | MS.gene013419:CDS |
| GCTGCATATGCCGGTCCTGG+AGG | 0.687897 | 3.3:+78358727 | MS.gene013419:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAACCA+AGG | - | chr3.3:78359110-78359129 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAACCAA+GGG | - | chr3.3:78359109-78359128 | None:intergenic | 10.0% |
| !! | AATAAAATAAAATTCAATTC+TGG | - | chr3.3:78355910-78355929 | None:intergenic | 10.0% |
| !! | CAAATATATAAATATAGAAT+AGG | - | chr3.3:78356646-78356665 | None:intergenic | 10.0% |
| !! | TAAATAAATATGTAAAACTA+AGG | - | chr3.3:78359556-78359575 | None:intergenic | 10.0% |
| !! | TAATTAAATTTCAAAAAGAT+AGG | - | chr3.3:78358766-78358785 | None:intergenic | 10.0% |
| !!! | TTATTTCTTAAATATATCAA+AGG | - | chr3.3:78356924-78356943 | None:intergenic | 10.0% |
| !! | AATATTAAAATTGTAACAGT+GGG | + | chr3.3:78356617-78356636 | MS.gene013419:intron | 15.0% |
| !! | AATTCTTAAATGAAAATGAA+TGG | + | chr3.3:78357750-78357769 | MS.gene013419:intron | 15.0% |
| !! | ACTACATTATAAACAAAATT+TGG | - | chr3.3:78358638-78358657 | None:intergenic | 15.0% |
| !! | AGAAAATAAGATTAGAAAAT+AGG | - | chr3.3:78359795-78359814 | None:intergenic | 15.0% |
| !! | CAATTGATCAAATAAATTTA+TGG | + | chr3.3:78355860-78355879 | MS.gene013419:intron | 15.0% |
| !! | TTCATTTATCTTATTCAAAA+AGG | + | chr3.3:78359198-78359217 | MS.gene013419:intron | 15.0% |
| !! | TTTCAATTAAAATAAGTGTA+TGG | - | chr3.3:78359446-78359465 | None:intergenic | 15.0% |
| !!! | AATAAGTTGAAAACATATTA+TGG | - | chr3.3:78356098-78356117 | None:intergenic | 15.0% |
| !!! | AGTTTTACATATTTATTTAC+AGG | + | chr3.3:78359557-78359576 | MS.gene013419:intron | 15.0% |
| !! | AAATTCTATATCAAGTCAAA+AGG | - | chr3.3:78356325-78356344 | None:intergenic | 20.0% |
| !! | AACATATATATCACTCTTAA+CGG | - | chr3.3:78356442-78356461 | None:intergenic | 20.0% |
| !! | AAGTTGTTCTATAAGTATTA+TGG | - | chr3.3:78356133-78356152 | None:intergenic | 20.0% |
| !! | ACATATAAATTGAATCAATG+TGG | + | chr3.3:78358278-78358297 | MS.gene013419:intron | 20.0% |
| !! | ATAGTTATCAATCATTGAAA+TGG | + | chr3.3:78357787-78357806 | MS.gene013419:intron | 20.0% |
| !! | ATTATAAACAAAATTTGGAC+AGG | - | chr3.3:78358633-78358652 | None:intergenic | 20.0% |
| !! | CAATATTAAAATTGTAACAG+TGG | + | chr3.3:78356616-78356635 | MS.gene013419:intron | 20.0% |
| !! | CTTCATAAATAAATAGTTTG+CGG | + | chr3.3:78358090-78358109 | MS.gene013419:intron | 20.0% |
| !! | TACTTTCACAAAATTATACA+TGG | + | chr3.3:78357293-78357312 | MS.gene013419:intron | 20.0% |
| !! | TGATTCAATTTATATGTACT+AGG | - | chr3.3:78358275-78358294 | None:intergenic | 20.0% |
| !! | TGCAAAAACAATAGTATAAT+GGG | - | chr3.3:78358446-78358465 | None:intergenic | 20.0% |
| !! | TGTTCATAATAACAATACTA+TGG | + | chr3.3:78358941-78358960 | MS.gene013419:intron | 20.0% |
| !! | TTAAGAGTGATATATATGTT+TGG | + | chr3.3:78356442-78356461 | MS.gene013419:intron | 20.0% |
| !!! | ATTATACTATTGTTTTTGCA+GGG | + | chr3.3:78358446-78358465 | MS.gene013419:intron | 20.0% |
| !!! | CACTGTTACAATTTTAATAT+TGG | - | chr3.3:78356618-78356637 | None:intergenic | 20.0% |
| !!! | CAGCATAATATATCTTTTTA+TGG | + | chr3.3:78357611-78357630 | MS.gene013419:intron | 20.0% |
| !!! | CATATGTTAATGTTATGTTT+TGG | + | chr3.3:78356860-78356879 | MS.gene013419:intron | 20.0% |
| !!! | TAGTACTATAACTTTAAGTT+GGG | - | chr3.3:78359514-78359533 | None:intergenic | 20.0% |
| !!! | TCAATGATTGATAACTATTA+AGG | - | chr3.3:78357785-78357804 | None:intergenic | 20.0% |
| !!! | TTAATATAAGTTGATGCTTA+AGG | + | chr3.3:78359128-78359147 | MS.gene013419:intron | 20.0% |
| !!! | TTTTGTTATGAGTTTACTTA+CGG | + | chr3.3:78358401-78358420 | MS.gene013419:intron | 20.0% |
| ! | AAAAAAAAAAAAACCAAGGG+TGG | - | chr3.3:78359106-78359125 | None:intergenic | 25.0% |
| ! | AAAGTTAGTCATAATGAACA+TGG | - | chr3.3:78357343-78357362 | None:intergenic | 25.0% |
| ! | AAATGAAAAAATCATACACC+AGG | - | chr3.3:78359185-78359204 | None:intergenic | 25.0% |
| ! | AAGTTAGTCATAATGAACAT+GGG | - | chr3.3:78357342-78357361 | None:intergenic | 25.0% |
| ! | ACATATTTATTTACAGGTCT+GGG | + | chr3.3:78359563-78359582 | MS.gene013419:intron | 25.0% |
| ! | ACCCTGATAAAATTATAGAA+TGG | - | chr3.3:78358153-78358172 | None:intergenic | 25.0% |
| ! | ACTATTTATTTATGAAGCAG+CGG | - | chr3.3:78358087-78358106 | None:intergenic | 25.0% |
| ! | ATATCACTGAATATACTTGA+GGG | + | chr3.3:78356748-78356767 | MS.gene013419:intron | 25.0% |
| ! | ATTTATGTGACATGATGATT+TGG | + | chr3.3:78355954-78355973 | MS.gene013419:intron | 25.0% |
| ! | CCCTGATAAAATTATAGAAT+GGG | - | chr3.3:78358152-78358171 | None:intergenic | 25.0% |
| ! | CTGCAAAAACAATAGTATAA+TGG | - | chr3.3:78358447-78358466 | None:intergenic | 25.0% |
| ! | CTTCCAAATCAAATATAGTA+AGG | - | chr3.3:78357158-78357177 | None:intergenic | 25.0% |
| ! | GCAAAATAAAATCTTGATGA+AGG | + | chr3.3:78356375-78356394 | MS.gene013419:intron | 25.0% |
| ! | GCTTAAAATTTCGAATGTTT+CGG | - | chr3.3:78359049-78359068 | None:intergenic | 25.0% |
| ! | GTAGTACTATAACTTTAAGT+TGG | - | chr3.3:78359515-78359534 | None:intergenic | 25.0% |
| ! | GTATATTCAGTGATATCAAA+AGG | - | chr3.3:78356744-78356763 | None:intergenic | 25.0% |
| ! | GTTCCTTACTATATTTGATT+TGG | + | chr3.3:78357152-78357171 | MS.gene013419:intron | 25.0% |
| ! | TACATATTTATTTACAGGTC+TGG | + | chr3.3:78359562-78359581 | MS.gene013419:intron | 25.0% |
| ! | TATCAATGAAACGGTTATTA+AGG | + | chr3.3:78356017-78356036 | MS.gene013419:CDS | 25.0% |
| ! | TATGACAATTGTTACAATCT+CGG | + | chr3.3:78358188-78358207 | MS.gene013419:CDS | 25.0% |
| ! | TATGCTATAAGTGCTTAATT+AGG | + | chr3.3:78356236-78356255 | MS.gene013419:intron | 25.0% |
| ! | TCAAAAAGGTTAAATGAGTA+AGG | + | chr3.3:78359212-78359231 | MS.gene013419:intron | 25.0% |
| ! | TGATAAAATTATAGAATGGG+AGG | - | chr3.3:78358149-78358168 | None:intergenic | 25.0% |
| ! | TGGATTGTTATGATGATTAA+CGG | + | chr3.3:78356290-78356309 | MS.gene013419:intron | 25.0% |
| ! | TTCAGACTTCTAGATATTTA+TGG | - | chr3.3:78359404-78359423 | None:intergenic | 25.0% |
| ! | TTCTGTGACAAGAAATTTAA+AGG | + | chr3.3:78356702-78356721 | MS.gene013419:CDS | 25.0% |
| !! | CCCATTCTATAATTTTATCA+GGG | + | chr3.3:78358149-78358168 | MS.gene013419:intron | 25.0% |
| !! | GCATCTATGTGATAAATTTT+GGG | + | chr3.3:78359346-78359365 | MS.gene013419:intron | 25.0% |
| !! | GGTTCATTCAACATTTTATT+GGG | + | chr3.3:78358580-78358599 | MS.gene013419:intron | 25.0% |
| !! | GTTCATTCAACATTTTATTG+GGG | + | chr3.3:78358581-78358600 | MS.gene013419:intron | 25.0% |
| !! | TCCCATTCTATAATTTTATC+AGG | + | chr3.3:78358148-78358167 | MS.gene013419:intron | 25.0% |
| !! | TGCATCTATGTGATAAATTT+TGG | + | chr3.3:78359345-78359364 | MS.gene013419:intron | 25.0% |
| !! | TGGTTCATTCAACATTTTAT+TGG | + | chr3.3:78358579-78358598 | MS.gene013419:intron | 25.0% |
| !! | TTCTTGTTTATATTGTTACC+TGG | + | chr3.3:78359164-78359183 | MS.gene013419:intron | 25.0% |
| !! | TTTTTCATGTAACCAAGTTT+AGG | - | chr3.3:78357950-78357969 | None:intergenic | 25.0% |
| !!! | ATATTTGATTTGGAAGTGTA+GGG | + | chr3.3:78357162-78357181 | MS.gene013419:intron | 25.0% |
| !!! | CATTATACTATTGTTTTTGC+AGG | + | chr3.3:78358445-78358464 | MS.gene013419:intron | 25.0% |
| !!! | TATATTTGATTTGGAAGTGT+AGG | + | chr3.3:78357161-78357180 | MS.gene013419:intron | 25.0% |
| !!! | TGAAATTATTTTTCCACAAC+TGG | + | chr3.3:78359420-78359439 | MS.gene013419:intron | 25.0% |
| !!! | TTATACTATTGTTTTTGCAG+GGG | + | chr3.3:78358447-78358466 | MS.gene013419:intron | 25.0% |
| AATGAGAACATCATATCCAA+AGG | - | chr3.3:78357670-78357689 | None:intergenic | 30.0% | |
| ATATTAGAATCTAACCCAAG+AGG | - | chr3.3:78357447-78357466 | None:intergenic | 30.0% | |
| CATCAGATGTAATTTAAACC+TGG | - | chr3.3:78357574-78357593 | None:intergenic | 30.0% | |
| CATTAACACCAAACTGAATT+TGG | + | chr3.3:78357698-78357717 | MS.gene013419:intron | 30.0% | |
| GATATCACTGAATATACTTG+AGG | + | chr3.3:78356747-78356766 | MS.gene013419:intron | 30.0% | |
| GCATTTGAAAATCTTGATGA+AGG | - | chr3.3:78356357-78356376 | None:intergenic | 30.0% | |
| GGTAAAATGATACCTAAACT+TGG | + | chr3.3:78357935-78357954 | MS.gene013419:intron | 30.0% | |
| TAAAATTTCGAATGTTTCGG+CGG | - | chr3.3:78359046-78359065 | None:intergenic | 30.0% | |
| TACGATGTTAAGTCGTTTAA+TGG | + | chr3.3:78357727-78357746 | MS.gene013419:intron | 30.0% | |
| TAGCTTCTAACTTCTATACT+CGG | - | chr3.3:78359473-78359492 | None:intergenic | 30.0% | |
| TGAACAACACTTCTATTCTT+AGG | - | chr3.3:78357514-78357533 | None:intergenic | 30.0% | |
| TGCACTATTCAATTTCTATG+TGG | + | chr3.3:78357064-78357083 | MS.gene013419:intron | 30.0% | |
| TGCATGCAATATCAATGAAA+CGG | + | chr3.3:78356008-78356027 | MS.gene013419:CDS | 30.0% | |
| TTATGCTGCAAAATAGTGAA+GGG | - | chr3.3:78359870-78359889 | None:intergenic | 30.0% | |
| TTGCAGCATAAGGTAATAAA+TGG | + | chr3.3:78359879-78359898 | MS.gene013419:intron | 30.0% | |
| TTTAGCCTACTAAGAACAAA+TGG | - | chr3.3:78359765-78359784 | None:intergenic | 30.0% | |
| TTTGTTCTTAGTAGGCTAAA+CGG | + | chr3.3:78359765-78359784 | MS.gene013419:intron | 30.0% | |
| ! | TATCTTTTTATGGTGTCTGT+TGG | + | chr3.3:78357621-78357640 | MS.gene013419:intron | 30.0% |
| ! | TTTTGTATTCGATCTGTGAA+TGG | + | chr3.3:78358360-78358379 | MS.gene013419:CDS | 30.0% |
| !! | GAGATAAGTAAGACTTTTTC+TGG | - | chr3.3:78358805-78358824 | None:intergenic | 30.0% |
| !! | GTGATAAATTTTGGGTCTTT+TGG | + | chr3.3:78359354-78359373 | MS.gene013419:intron | 30.0% |
| !!! | AACTTTTTCACTTCCTACTT+AGG | + | chr3.3:78357357-78357376 | MS.gene013419:intron | 30.0% |
| !!! | AATGTTATGTTTTGGCTAAG+TGG | + | chr3.3:78356868-78356887 | MS.gene013419:intron | 30.0% |
| !!! | ACGAGAAAAAACCGTTTTTT+TGG | - | chr3.3:78358221-78358240 | None:intergenic | 30.0% |
| !!! | ACTTTTTCACTTCCTACTTA+GGG | + | chr3.3:78357358-78357377 | MS.gene013419:intron | 30.0% |
| !!! | AGAAAAAACCGTTTTTTTGG+AGG | - | chr3.3:78358218-78358237 | None:intergenic | 30.0% |
| !!! | GAAAAAACCGTTTTTTTGGA+GGG | - | chr3.3:78358217-78358236 | None:intergenic | 30.0% |
| AACGACTTAACATCGTATCT+AGG | - | chr3.3:78357724-78357743 | None:intergenic | 35.0% | |
| AAGGAAATAAAACCAGCCTT+TGG | + | chr3.3:78357651-78357670 | MS.gene013419:intron | 35.0% | |
| AGAAACTAACTATGACACAG+TGG | - | chr3.3:78357888-78357907 | None:intergenic | 35.0% | |
| AGTGGACATAATATCTATGG+AGG | - | chr3.3:78357870-78357889 | None:intergenic | 35.0% | |
| ATGCAGATTTATTTGCCTCT+TGG | + | chr3.3:78357429-78357448 | MS.gene013419:CDS | 35.0% | |
| ATGGAAATGTCTTACGATCA+GGG | - | chr3.3:78357197-78357216 | None:intergenic | 35.0% | |
| ATTCTACATACTACGAAGAG+TGG | - | chr3.3:78357994-78358013 | None:intergenic | 35.0% | |
| ATTCTATGTGTGCATTTCAC+AGG | + | chr3.3:78357543-78357562 | MS.gene013419:intron | 35.0% | |
| ATTGCCAACTTCCAACATAT+CGG | - | chr3.3:78358853-78358872 | None:intergenic | 35.0% | |
| CACAGTGGACATAATATCTA+TGG | - | chr3.3:78357873-78357892 | None:intergenic | 35.0% | |
| CCATGTATCATTGATGTCAT+CGG | - | chr3.3:78358526-78358545 | None:intergenic | 35.0% | |
| CCTACTAAGAACAAATGGAA+AGG | - | chr3.3:78359760-78359779 | None:intergenic | 35.0% | |
| CCTTTCCATTTGTTCTTAGT+AGG | + | chr3.3:78359757-78359776 | MS.gene013419:intron | 35.0% | |
| CGATGACATCAATGATACAT+GGG | + | chr3.3:78358524-78358543 | MS.gene013419:CDS | 35.0% | |
| CGTAGTATGTAGAATGTAGA+TGG | + | chr3.3:78357999-78358018 | MS.gene013419:intron | 35.0% | |
| CTTATGCTGCAAAATAGTGA+AGG | - | chr3.3:78359871-78359890 | None:intergenic | 35.0% | |
| GAAACGGTTATTAAGGAAAC+AGG | + | chr3.3:78356024-78356043 | MS.gene013419:CDS | 35.0% | |
| GAAGTCATTGCTGTAAATCA+AGG | + | chr3.3:78359075-78359094 | MS.gene013419:CDS | 35.0% | |
| GGTTATGTGTACGTCAATAT+AGG | + | chr3.3:78356576-78356595 | MS.gene013419:CDS | 35.0% | |
| TATCTAGGCCAAATTCAGTT+TGG | - | chr3.3:78357709-78357728 | None:intergenic | 35.0% | |
| TCCTTTATCAGGAAATCGTT+TGG | + | chr3.3:78359590-78359609 | MS.gene013419:CDS | 35.0% | |
| TCGATCTGTGAATGGTAATA+AGG | + | chr3.3:78358368-78358387 | MS.gene013419:intron | 35.0% | |
| TGCAGATTTATTTGCCTCTT+GGG | + | chr3.3:78357430-78357449 | MS.gene013419:CDS | 35.0% | |
| TGGAATTCATGTTTCCGTAA+GGG | + | chr3.3:78359686-78359705 | MS.gene013419:CDS | 35.0% | |
| TGTGACTATAACAGCATCAT+GGG | + | chr3.3:78359644-78359663 | MS.gene013419:CDS | 35.0% | |
| TTCAAGCTTGACAAGTCTTA+TGG | + | chr3.3:78356069-78356088 | MS.gene013419:intron | 35.0% | |
| TTCCTCATCCAATTGAAAGT+CGG | - | chr3.3:78356825-78356844 | None:intergenic | 35.0% | |
| TTGGCATATATTCTGATGCT+GGG | + | chr3.3:78357265-78357284 | MS.gene013419:CDS | 35.0% | |
| TTGTGACTATAACAGCATCA+TGG | + | chr3.3:78359643-78359662 | MS.gene013419:CDS | 35.0% | |
| TTGTGCAAAGATGATCTTCT+TGG | + | chr3.3:78357817-78357836 | MS.gene013419:intron | 35.0% | |
| TTTACGACCAGTTTCATTGA+GGG | - | chr3.3:78358339-78358358 | None:intergenic | 35.0% | |
| ! | CTTCACTATTTTGCAGCATA+AGG | + | chr3.3:78359869-78359888 | MS.gene013419:intron | 35.0% |
| ! | GGATCAATTTTCCACGAAAA+TGG | + | chr3.3:78357404-78357423 | MS.gene013419:CDS | 35.0% |
| ! | TTTGCGGTTATGTATTTCTG+TGG | + | chr3.3:78358106-78358125 | MS.gene013419:intron | 35.0% |
| ! | TTTTACGACCAGTTTCATTG+AGG | - | chr3.3:78358340-78358359 | None:intergenic | 35.0% |
| ! | TTTTCGTGGAAAATTGATCC+TGG | - | chr3.3:78357404-78357423 | None:intergenic | 35.0% |
| !!! | GGTGTCTGTTGGATTTTTTA+AGG | + | chr3.3:78357632-78357651 | MS.gene013419:intron | 35.0% |
| AATAAGTGTATGGCCAGTTG+TGG | - | chr3.3:78359436-78359455 | None:intergenic | 40.0% | |
| ACATAATATCTATGGAGGCC+TGG | - | chr3.3:78357865-78357884 | None:intergenic | 40.0% | |
| ACATCAATGATACATGGGCA+AGG | + | chr3.3:78358529-78358548 | MS.gene013419:CDS | 40.0% | |
| ACATCGCAACCAATCAAAAG+AGG | - | chr3.3:78359012-78359031 | None:intergenic | 40.0% | |
| ACTACGAGCTTGAAGTATGT+TGG | + | chr3.3:78359530-78359549 | MS.gene013419:intron | 40.0% | |
| AGAACATCATATCCAAAGGC+TGG | - | chr3.3:78357666-78357685 | None:intergenic | 40.0% | |
| AGTTAGAAGCTAGTCCAAAC+TGG | + | chr3.3:78359481-78359500 | MS.gene013419:intron | 40.0% | |
| ATGTTTCCGTAAGGGATTTG+TGG | + | chr3.3:78359694-78359713 | MS.gene013419:CDS | 40.0% | |
| ATTTATTTACAGGTCTGGGC+AGG | + | chr3.3:78359567-78359586 | MS.gene013419:intron | 40.0% | |
| CAAAAAACACACCAGCACAT+CGG | - | chr3.3:78356986-78357005 | None:intergenic | 40.0% | |
| CAACTTGAACTTTCCTTCCT+TGG | - | chr3.3:78359276-78359295 | None:intergenic | 40.0% | |
| CAGATACTCTTTATGTGTCC+TGG | + | chr3.3:78357475-78357494 | MS.gene013419:intron | 40.0% | |
| CAGCACAACTCAAAAGGAAA+CGG | + | chr3.3:78357914-78357933 | MS.gene013419:intron | 40.0% | |
| CATAATATCTATGGAGGCCT+GGG | - | chr3.3:78357864-78357883 | None:intergenic | 40.0% | |
| CATCTTAGTGACTTATCTCG+AGG | + | chr3.3:78358049-78358068 | MS.gene013419:intron | 40.0% | |
| CCATCTAAAAGTCAAAGTCC+AGG | - | chr3.3:78358562-78358581 | None:intergenic | 40.0% | |
| CCGATGACATCAATGATACA+TGG | + | chr3.3:78358523-78358542 | MS.gene013419:CDS | 40.0% | |
| CTGGAATTCATGTTTCCGTA+AGG | + | chr3.3:78359685-78359704 | MS.gene013419:CDS | 40.0% | |
| CTTGGCATATATTCTGATGC+TGG | + | chr3.3:78357264-78357283 | MS.gene013419:CDS | 40.0% | |
| GACATGTAAAAGCCCTAAGT+AGG | - | chr3.3:78357373-78357392 | None:intergenic | 40.0% | |
| GATATGTTGGAAGTTGGCAA+TGG | + | chr3.3:78358852-78358871 | MS.gene013419:CDS | 40.0% | |
| GATCGTAAGACATTTCCATC+AGG | + | chr3.3:78357198-78357217 | MS.gene013419:CDS | 40.0% | |
| GATGGAAATGTCTTACGATC+AGG | - | chr3.3:78357198-78357217 | None:intergenic | 40.0% | |
| GCCAAACGATTTCCTGATAA+AGG | - | chr3.3:78359594-78359613 | None:intergenic | 40.0% | |
| TAGAAGCAGCACAACTCAAA+AGG | + | chr3.3:78357908-78357927 | MS.gene013419:intron | 40.0% | |
| TCCTCATCCAATTGAAAGTC+GGG | - | chr3.3:78356824-78356843 | None:intergenic | 40.0% | |
| TGCTGATCTTAATGACCGAT+GGG | + | chr3.3:78358705-78358724 | MS.gene013419:CDS | 40.0% | |
| TGGAATAGATGGTTGTAGTC+AGG | + | chr3.3:78359297-78359316 | MS.gene013419:CDS | 40.0% | |
| TGTCTATCCCGACTTTCAAT+TGG | + | chr3.3:78356814-78356833 | MS.gene013419:intron | 40.0% | |
| TTGCCAACTTCCAACATATC+GGG | - | chr3.3:78358852-78358871 | None:intergenic | 40.0% | |
| TTGCTGATCTTAATGACCGA+TGG | + | chr3.3:78358704-78358723 | MS.gene013419:CDS | 40.0% | |
| ! | AATCTGCATCACCATTTTCG+TGG | - | chr3.3:78357418-78357437 | None:intergenic | 40.0% |
| ! | CTTGGAACTTCACACTTTTG+CGG | + | chr3.3:78357835-78357854 | MS.gene013419:intron | 40.0% |
| ! | TTGTGGCAGGTAATTTTGCT+TGG | + | chr3.3:78359711-78359730 | MS.gene013419:intron | 40.0% |
| !! | ATGATTTGGTGTCGTGTAGA+TGG | + | chr3.3:78355968-78355987 | MS.gene013419:intron | 40.0% |
| !! | CCTGGACTTTGACTTTTAGA+TGG | + | chr3.3:78358559-78358578 | MS.gene013419:intron | 40.0% |
| !! | CGTCAATATAGGTACTGATC+TGG | + | chr3.3:78356587-78356606 | MS.gene013419:intron | 40.0% |
| !! | GTTCAAGTTGCTGGAATAGA+TGG | + | chr3.3:78359286-78359305 | MS.gene013419:CDS | 40.0% |
| ACTTTATGCATCCGATGTGC+TGG | + | chr3.3:78356972-78356991 | MS.gene013419:intron | 45.0% | |
| AGTTGGGCAAAGATCCAGTT+TGG | - | chr3.3:78359498-78359517 | None:intergenic | 45.0% | |
| ATCACGCATAGGTGGATATC+TGG | - | chr3.3:78358315-78358334 | None:intergenic | 45.0% | |
| ATCGTTTGGCTGTTGCTCTT+TGG | + | chr3.3:78359604-78359623 | MS.gene013419:CDS | 45.0% | |
| ATGTGTCCTGGACTTTGTAG+AGG | + | chr3.3:78357487-78357506 | MS.gene013419:intron | 45.0% | |
| ATGTTGGAAGTTGGCAATGG+TGG | + | chr3.3:78358855-78358874 | MS.gene013419:CDS | 45.0% | |
| CATGGGCAAGGTTAAAATCC+TGG | + | chr3.3:78358541-78358560 | MS.gene013419:intron | 45.0% | |
| CGTGGAAAATTGATCCTGGT+CGG | - | chr3.3:78357400-78357419 | None:intergenic | 45.0% | |
| CTGCTTAGAGCAGTTTCGTA+TGG | - | chr3.3:78359737-78359756 | None:intergenic | 45.0% | |
| GACGTACACATAACCCAACT+TGG | - | chr3.3:78356571-78356590 | None:intergenic | 45.0% | |
| GATTGTGAACTTGTGTGTGC+AGG | + | chr3.3:78358984-78359003 | MS.gene013419:intron | 45.0% | |
| GCAAGTGCTTTGATTCCTGA+TGG | - | chr3.3:78357216-78357235 | None:intergenic | 45.0% | |
| GCAGAGTAAGATGCTGTAGA+TGG | - | chr3.3:78359969-78359988 | None:intergenic | 45.0% | |
| TACAATGTGCAGACGATTGC+TGG | + | chr3.3:78356677-78356696 | MS.gene013419:intron | 45.0% | |
| TACCTGCCACAAATCCCTTA+CGG | - | chr3.3:78359703-78359722 | None:intergenic | 45.0% | |
| TCCCGACTTTCAATTGGATG+AGG | + | chr3.3:78356820-78356839 | MS.gene013419:intron | 45.0% | |
| TCCCTTCCCATGGACATAAT+CGG | - | chr3.3:78357238-78357257 | None:intergenic | 45.0% | |
| TCGGCATCCCTCCAAAAAAA+CGG | + | chr3.3:78358207-78358226 | MS.gene013419:CDS | 45.0% | |
| TGCCAACTTCCAACATATCG+GGG | - | chr3.3:78358851-78358870 | None:intergenic | 45.0% | |
| TGTTGACGATCCTGCTCTAT+GGG | + | chr3.3:78358470-78358489 | MS.gene013419:CDS | 45.0% | |
| TTAGGACCTCTACAAAGTCC+AGG | - | chr3.3:78357496-78357515 | None:intergenic | 45.0% | |
| TTTACATGTCAAGTCCGACC+AGG | + | chr3.3:78357383-78357402 | MS.gene013419:CDS | 45.0% | |
| ! | CACTTGCCGATTATGTCCAT+GGG | + | chr3.3:78357229-78357248 | MS.gene013419:CDS | 45.0% |
| ! | CAGCATATGGGCTTTAGCAA+AGG | + | chr3.3:78358908-78358927 | MS.gene013419:CDS | 45.0% |
| ! | TGCACTGGTATCAACTGGAT+TGG | + | chr3.3:78356545-78356564 | MS.gene013419:CDS | 45.0% |
| !! | ACTTATCTCGAGGCGCTTTT+CGG | + | chr3.3:78358059-78358078 | MS.gene013419:intron | 45.0% |
| !! | ATCAACTGGATTGGCCAAGT+TGG | + | chr3.3:78356554-78356573 | MS.gene013419:CDS | 45.0% |
| !! | CAGGCACAGTTGGTAATAGT+TGG | + | chr3.3:78358493-78358512 | MS.gene013419:CDS | 45.0% |
| !! | GGAAGGAAAGTTCAAGTTGC+TGG | + | chr3.3:78359277-78359296 | MS.gene013419:CDS | 45.0% |
| !! | TCAACTGGATTGGCCAAGTT+GGG | + | chr3.3:78356555-78356574 | MS.gene013419:CDS | 45.0% |
| AACAGTGTCTAGCGCGTAGA+TGG | + | chr3.3:78356270-78356289 | MS.gene013419:intron | 50.0% | |
| AATCAAGGTCTCACCACCCT+TGG | + | chr3.3:78359090-78359109 | MS.gene013419:intron | 50.0% | |
| ACCGTGCTCACTTCAGCATA+TGG | + | chr3.3:78358895-78358914 | MS.gene013419:CDS | 50.0% | |
| ACTCACTTGGAGTCCAAGGA+AGG | + | chr3.3:78359260-78359279 | MS.gene013419:CDS | 50.0% | |
| ATACCAGTGCATCAGCTGCA+AGG | - | chr3.3:78356536-78356555 | None:intergenic | 50.0% | |
| ATGTCTTACGATCAGGGACC+AGG | - | chr3.3:78357191-78357210 | None:intergenic | 50.0% | |
| CAATGGTGGCATGACTTACC+AGG | + | chr3.3:78358869-78358888 | MS.gene013419:CDS | 50.0% | |
| CCCATATGCTGAAGTGAGCA+CGG | - | chr3.3:78358899-78358918 | None:intergenic | 50.0% | |
| CCGTGCTCACTTCAGCATAT+GGG | + | chr3.3:78358896-78358915 | MS.gene013419:CDS | 50.0% | |
| CGTGATGCCCTCAATGAAAC+TGG | + | chr3.3:78358329-78358348 | MS.gene013419:CDS | 50.0% | |
| GACCCCGATATGTTGGAAGT+TGG | + | chr3.3:78358846-78358865 | MS.gene013419:intron | 50.0% | |
| GCCGATTATGTCCATGGGAA+GGG | + | chr3.3:78357234-78357253 | MS.gene013419:CDS | 50.0% | |
| TATCCTTGCAGCTGATGCAC+TGG | + | chr3.3:78356530-78356549 | MS.gene013419:intron | 50.0% | |
| TGAAGTGAGCACGGTATTCC+TGG | - | chr3.3:78358890-78358909 | None:intergenic | 50.0% | |
| TGCATTTCACAGGTTACGCC+AGG | + | chr3.3:78357553-78357572 | MS.gene013419:intron | 50.0% | |
| TGTCGTGTAGATGGAACAGC+TGG | + | chr3.3:78355977-78355996 | MS.gene013419:intron | 50.0% | |
| TGTCTCTCTGCAGACTCACT+TGG | + | chr3.3:78359247-78359266 | MS.gene013419:intron | 50.0% | |
| TTCCGTAAGGGATTTGTGGC+AGG | + | chr3.3:78359698-78359717 | MS.gene013419:CDS | 50.0% | |
| TTCGACAGACCCCGATATGT+TGG | + | chr3.3:78358839-78358858 | MS.gene013419:intron | 50.0% | |
| ! | GCACTTGCCGATTATGTCCA+TGG | + | chr3.3:78357228-78357247 | MS.gene013419:CDS | 50.0% |
| ! | GCTGATGCACTGGTATCAAC+TGG | + | chr3.3:78356540-78356559 | MS.gene013419:intron | 50.0% |
| ! | GTGCAGGCTCCTCTTTTGAT+TGG | + | chr3.3:78359000-78359019 | MS.gene013419:intron | 50.0% |
| ! | GTGTTGACGATCCTGCTCTA+TGG | + | chr3.3:78358469-78358488 | MS.gene013419:CDS | 50.0% |
| ! | TGCCGATTATGTCCATGGGA+AGG | + | chr3.3:78357233-78357252 | MS.gene013419:CDS | 50.0% |
| ! | TTTGGAAGTGTAGGGTGACC+TGG | + | chr3.3:78357170-78357189 | MS.gene013419:intron | 50.0% |
| !! | TCATTGAGGGCATCACGCAT+AGG | - | chr3.3:78358326-78358345 | None:intergenic | 50.0% |
| ACAGCATCATGGGCAGCACT+CGG | + | chr3.3:78359654-78359673 | MS.gene013419:CDS | 55.0% | |
| ACCATTCCATCCTCCAGGAC+CGG | - | chr3.3:78358740-78358759 | None:intergenic | 55.0% | |
| CAAGCTTGAGTCCCTTCCCA+TGG | - | chr3.3:78357248-78357267 | None:intergenic | 55.0% | |
| CATGGGAAGGGACTCAAGCT+TGG | + | chr3.3:78357246-78357265 | MS.gene013419:CDS | 55.0% | |
| GCAGACTCACTTGGAGTCCA+AGG | + | chr3.3:78359256-78359275 | MS.gene013419:intron | 55.0% | |
| GGTGTACCATTCCATCCTCC+AGG | - | chr3.3:78358745-78358764 | None:intergenic | 55.0% | |
| GTCTGGGCAGGTCCTTTATC+AGG | + | chr3.3:78359579-78359598 | MS.gene013419:CDS | 55.0% | |
| ! | TCACACTTTTGCGGTGACCC+AGG | + | chr3.3:78357844-78357863 | MS.gene013419:intron | 55.0% |
| !! | TTGAGGGCATCACGCATAGG+TGG | - | chr3.3:78358323-78358342 | None:intergenic | 55.0% |
| ACTGTGCCTGCCCATAGAGC+AGG | - | chr3.3:78358483-78358502 | None:intergenic | 60.0% | |
| CAGCATCATGGGCAGCACTC+GGG | + | chr3.3:78359655-78359674 | MS.gene013419:CDS | 60.0% | |
| CATATGCCGGTCCTGGAGGA+TGG | + | chr3.3:78358731-78358750 | MS.gene013419:CDS | 60.0% | |
| GACCGGCATATGCAGCCCAT+CGG | - | chr3.3:78358723-78358742 | None:intergenic | 60.0% | |
| GACGATCCTGCTCTATGGGC+AGG | + | chr3.3:78358474-78358493 | MS.gene013419:CDS | 60.0% | |
| GCAGCACTCGGGCTTGAATC+TGG | + | chr3.3:78359666-78359685 | MS.gene013419:CDS | 60.0% | |
| GCTCTATGGGCAGGCACAGT+TGG | + | chr3.3:78358483-78358502 | MS.gene013419:CDS | 60.0% | |
| !! | GACCGATGGGCTGCATATGC+CGG | + | chr3.3:78358718-78358737 | MS.gene013419:CDS | 60.0% |
| GCCGGTCCTGGAGGATGGAA+TGG | + | chr3.3:78358736-78358755 | MS.gene013419:CDS | 65.0% | |
| GCTGCATATGCCGGTCCTGG+AGG | + | chr3.3:78358727-78358746 | MS.gene013419:CDS | 65.0% | |
| TGGGCTGCATATGCCGGTCC+TGG | + | chr3.3:78358724-78358743 | MS.gene013419:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 78355831 | 78359995 | 78355831 | ID=MS.gene013419 |
| chr3.3 | mRNA | 78355831 | 78359995 | 78355831 | ID=MS.gene013419.t1;Parent=MS.gene013419 |
| chr3.3 | exon | 78355831 | 78355835 | 78355831 | ID=MS.gene013419.t1.exon1;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78355831 | 78355835 | 78355831 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78355987 | 78356045 | 78355987 | ID=MS.gene013419.t1.exon2;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78355987 | 78356045 | 78355987 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78356541 | 78356597 | 78356541 | ID=MS.gene013419.t1.exon3;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78356541 | 78356597 | 78356541 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78356689 | 78356723 | 78356689 | ID=MS.gene013419.t1.exon4;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78356689 | 78356723 | 78356689 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78357183 | 78357286 | 78357183 | ID=MS.gene013419.t1.exon5;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78357183 | 78357286 | 78357183 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78357379 | 78357451 | 78357379 | ID=MS.gene013419.t1.exon6;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78357379 | 78357451 | 78357379 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78358170 | 78358228 | 78358170 | ID=MS.gene013419.t1.exon7;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78358170 | 78358228 | 78358170 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78358316 | 78358381 | 78358316 | ID=MS.gene013419.t1.exon8;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78358316 | 78358381 | 78358316 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78358467 | 78358550 | 78358467 | ID=MS.gene013419.t1.exon9;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78358467 | 78358550 | 78358467 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78358693 | 78358757 | 78358693 | ID=MS.gene013419.t1.exon10;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78358693 | 78358757 | 78358693 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78358847 | 78358929 | 78358847 | ID=MS.gene013419.t1.exon11;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78358847 | 78358929 | 78358847 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78359006 | 78359096 | 78359006 | ID=MS.gene013419.t1.exon12;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78359006 | 78359096 | 78359006 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78359260 | 78359318 | 78359260 | ID=MS.gene013419.t1.exon13;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78359260 | 78359318 | 78359260 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78359579 | 78359719 | 78359579 | ID=MS.gene013419.t1.exon14;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78359579 | 78359719 | 78359579 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| chr3.3 | exon | 78359885 | 78359995 | 78359885 | ID=MS.gene013419.t1.exon15;Parent=MS.gene013419.t1 |
| chr3.3 | CDS | 78359885 | 78359995 | 78359885 | ID=cds.MS.gene013419.t1;Parent=MS.gene013419.t1 |
| Gene Sequence |
| Protein sequence |
