Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27500.t1 | XP_013449264.1 | 94.3 | 401 | 20 | 2 | 1 | 399 | 10 | 409 | 1.30E-225 | 792 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27500.t1 | Q9FT97 | 74.4 | 399 | 101 | 1 | 1 | 399 | 13 | 410 | 1.5e-182 | 640.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27500.t1 | A0A072U1H6 | 94.3 | 401 | 20 | 2 | 1 | 399 | 10 | 409 | 9.5e-226 | 792.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene27500 | 0.848246 | 6.92E-60 | -1.69E-46 |
| MS.gene049993 | MS.gene27500 | 0.809931 | 1.48E-50 | -1.69E-46 |
| MS.gene050139 | MS.gene27500 | 0.805463 | 1.32E-49 | -1.69E-46 |
| MS.gene050168 | MS.gene27500 | 0.810202 | 1.30E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene27500 | 0.831361 | 1.74E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene27500 | 0.823201 | 1.57E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene27500 | 0.827562 | 1.46E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene27500 | 0.803262 | 3.79E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene27500 | 0.80739 | 5.17E-50 | -1.69E-46 |
| MS.gene050780 | MS.gene27500 | 0.828409 | 9.14E-55 | -1.69E-46 |
| MS.gene050820 | MS.gene27500 | 0.838089 | 3.54E-57 | -1.69E-46 |
| MS.gene051983 | MS.gene27500 | 0.819682 | 1.02E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene27500 | -0.817858 | 2.65E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene27500 | 0.839422 | 1.60E-57 | -1.69E-46 |
| MS.gene052333 | MS.gene27500 | 0.820273 | 7.48E-53 | -1.69E-46 |
| MS.gene052389 | MS.gene27500 | 0.854543 | 1.15E-61 | -1.69E-46 |
| MS.gene053811 | MS.gene27500 | 0.805556 | 1.26E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene27500 | 0.811239 | 7.73E-51 | -1.69E-46 |
| MS.gene054083 | MS.gene27500 | 0.819081 | 1.40E-52 | -1.69E-46 |
| MS.gene054093 | MS.gene27500 | 0.823063 | 1.69E-53 | -1.69E-46 |
| MS.gene054108 | MS.gene27500 | 0.805029 | 1.63E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene27500 | 0.812883 | 3.39E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene27500 | 0.837689 | 4.48E-57 | -1.69E-46 |
| MS.gene054291 | MS.gene27500 | -0.806038 | 9.99E-50 | -1.69E-46 |
| MS.gene05432 | MS.gene27500 | 0.800695 | 1.28E-48 | -1.69E-46 |
| MS.gene054468 | MS.gene27500 | 0.836091 | 1.15E-56 | -1.69E-46 |
| MS.gene054826 | MS.gene27500 | 0.831468 | 1.64E-55 | -1.69E-46 |
| MS.gene054930 | MS.gene27500 | 0.829572 | 4.78E-55 | -1.69E-46 |
| MS.gene054942 | MS.gene27500 | 0.806698 | 7.25E-50 | -1.69E-46 |
| MS.gene055217 | MS.gene27500 | 0.822863 | 1.89E-53 | -1.69E-46 |
| MS.gene055225 | MS.gene27500 | 0.819737 | 9.93E-53 | -1.69E-46 |
| MS.gene055358 | MS.gene27500 | 0.819072 | 1.41E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene27500 | 0.804763 | 1.85E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene27500 | 0.820384 | 7.06E-53 | -1.69E-46 |
| MS.gene056723 | MS.gene27500 | 0.806976 | 6.33E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene27500 | 0.809788 | 1.59E-50 | -1.69E-46 |
| MS.gene057255 | MS.gene27500 | 0.815365 | 9.60E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene27500 | 0.815483 | 9.03E-52 | -1.69E-46 |
| MS.gene058220 | MS.gene27500 | 0.849211 | 3.74E-60 | -1.69E-46 |
| MS.gene058378 | MS.gene27500 | 0.864689 | 1.01E-64 | -1.69E-46 |
| MS.gene058426 | MS.gene27500 | 0.81353 | 2.44E-51 | -1.69E-46 |
| MS.gene058710 | MS.gene27500 | 0.816682 | 4.88E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene27500 | 0.81696 | 4.22E-52 | -1.69E-46 |
| MS.gene059247 | MS.gene27500 | 0.816824 | 4.53E-52 | -1.69E-46 |
| MS.gene060038 | MS.gene27500 | 0.805061 | 1.60E-49 | -1.69E-46 |
| MS.gene060255 | MS.gene27500 | 0.815293 | 9.96E-52 | -1.69E-46 |
| MS.gene060998 | MS.gene27500 | 0.801881 | 7.30E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene27500 | -0.80052 | 1.39E-48 | -1.69E-46 |
| MS.gene061114 | MS.gene27500 | -0.838662 | 2.52E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27500 | MS.gene052453 | PPI |
| MS.gene27500 | MS.gene069814 | PPI |
| MS.gene07479 | MS.gene27500 | PPI |
| MS.gene27500 | MS.gene83318 | PPI |
| MS.gene27500 | MS.gene005005 | PPI |
| MS.gene27500 | MS.gene062192 | PPI |
| MS.gene27500 | MS.gene049391 | PPI |
| MS.gene27500 | MS.gene86814 | PPI |
| MS.gene27500 | MS.gene042962 | PPI |
| MS.gene27500 | MS.gene05536 | PPI |
| MS.gene004948 | MS.gene27500 | PPI |
| MS.gene27500 | MS.gene61402 | PPI |
| MS.gene27500 | MS.gene06516 | PPI |
| MS.gene27500 | MS.gene07480 | PPI |
| MS.gene27500 | MS.gene062191 | PPI |
| MS.gene27500 | MS.gene013419 | PPI |
| MS.gene27500 | MS.gene05535 | PPI |
| MS.gene27500 | MS.gene042963 | PPI |
| MS.gene059347 | MS.gene27500 | PPI |
| MS.gene27500 | MS.gene004947 | PPI |
| MS.gene27500 | MS.gene052452 | PPI |
| MS.gene27500 | MS.gene61401 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27500.t1 | MTR_7g073640 | 94.264 | 401 | 20 | 2 | 1 | 399 | 10 | 409 | 0.0 | 777 |
| MS.gene27500.t1 | MTR_7g073650 | 91.192 | 386 | 34 | 0 | 14 | 399 | 23 | 408 | 0.0 | 736 |
| MS.gene27500.t1 | MTR_6g069140 | 65.229 | 371 | 127 | 2 | 27 | 397 | 51 | 419 | 0.0 | 519 |
| MS.gene27500.t1 | MTR_6g086625 | 61.558 | 398 | 146 | 4 | 4 | 397 | 11 | 405 | 0.0 | 515 |
| MS.gene27500.t1 | MTR_6g086575 | 61.809 | 398 | 144 | 5 | 4 | 397 | 11 | 404 | 0.0 | 513 |
| MS.gene27500.t1 | MTR_1g077480 | 63.881 | 371 | 132 | 2 | 27 | 397 | 43 | 411 | 0.0 | 512 |
| MS.gene27500.t1 | MTR_1g077520 | 60.049 | 408 | 151 | 5 | 1 | 399 | 5 | 409 | 2.29e-180 | 508 |
| MS.gene27500.t1 | MTR_3g094160 | 58.543 | 398 | 160 | 3 | 3 | 397 | 30 | 425 | 1.54e-165 | 471 |
| MS.gene27500.t1 | MTR_1g077520 | 62.727 | 330 | 115 | 2 | 1 | 322 | 5 | 334 | 7.45e-152 | 433 |
| MS.gene27500.t1 | MTR_0279s0030 | 94.400 | 125 | 7 | 0 | 275 | 399 | 101 | 225 | 8.99e-78 | 240 |
| MS.gene27500.t1 | MTR_0279s0030 | 94.400 | 125 | 7 | 0 | 275 | 399 | 185 | 309 | 3.49e-76 | 239 |
| MS.gene27500.t1 | MTR_0279s0030 | 94.400 | 125 | 7 | 0 | 275 | 399 | 250 | 374 | 9.50e-76 | 240 |
| MS.gene27500.t1 | MTR_1g078410 | 64.000 | 125 | 45 | 0 | 96 | 220 | 60 | 184 | 3.20e-52 | 172 |
| MS.gene27500.t1 | MTR_2g096530 | 25.641 | 390 | 192 | 14 | 3 | 303 | 5 | 385 | 1.11e-21 | 97.4 |
| MS.gene27500.t1 | MTR_8g089745 | 25.320 | 391 | 194 | 13 | 1 | 306 | 8 | 385 | 2.77e-21 | 95.9 |
| MS.gene27500.t1 | MTR_8g089745 | 25.320 | 391 | 194 | 13 | 1 | 306 | 8 | 385 | 7.46e-21 | 95.1 |
| MS.gene27500.t1 | MTR_8g089740 | 26.531 | 392 | 189 | 14 | 1 | 306 | 3 | 381 | 1.18e-20 | 94.4 |
| MS.gene27500.t1 | MTR_8g089725 | 25.586 | 469 | 230 | 19 | 42 | 395 | 38 | 502 | 7.96e-20 | 91.7 |
| MS.gene27500.t1 | MTR_3g086580 | 25.843 | 356 | 172 | 11 | 38 | 303 | 36 | 389 | 1.52e-19 | 91.3 |
| MS.gene27500.t1 | MTR_8g089735 | 25.373 | 469 | 231 | 19 | 42 | 395 | 38 | 502 | 4.74e-19 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27500.t1 | AT5G08380 | 74.436 | 399 | 101 | 1 | 1 | 399 | 13 | 410 | 0.0 | 628 |
| MS.gene27500.t1 | AT5G08370 | 65.753 | 365 | 123 | 2 | 31 | 395 | 29 | 391 | 0.0 | 512 |
| MS.gene27500.t1 | AT5G08370 | 65.395 | 367 | 125 | 2 | 29 | 395 | 1 | 365 | 0.0 | 512 |
| MS.gene27500.t1 | AT5G08380 | 76.645 | 304 | 71 | 0 | 1 | 304 | 13 | 316 | 1.49e-178 | 499 |
| MS.gene27500.t1 | AT3G56310 | 59.067 | 386 | 153 | 3 | 15 | 397 | 46 | 429 | 4.59e-163 | 465 |
| MS.gene27500.t1 | AT3G56310 | 55.440 | 386 | 143 | 4 | 15 | 397 | 46 | 405 | 2.09e-146 | 422 |
| MS.gene27500.t1 | AT3G26380 | 24.432 | 352 | 176 | 11 | 42 | 306 | 42 | 390 | 1.30e-17 | 84.7 |
| MS.gene27500.t1 | AT3G26380 | 24.432 | 352 | 176 | 11 | 42 | 306 | 42 | 390 | 2.07e-17 | 84.7 |
Find 95 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAGGCTCCTCTTCTTCT+AGG | 0.179259 | 7.2:-31148445 | MS.gene27500:intron |
| GAGAAGTGTATCCAGCTTTA+TGG | 0.220990 | 7.2:-31149083 | MS.gene27500:CDS |
| TGGTGACCCTCTTGCATATT+TGG | 0.229764 | 7.2:-31150968 | MS.gene27500:CDS |
| TGTGTCACTGCTTCATCATT+AGG | 0.260692 | 7.2:-31150939 | MS.gene27500:CDS |
| CGAACTTAATCGCGATAATA+AGG | 0.278598 | 7.2:-31149933 | MS.gene27500:intron |
| ATATTGATATAACAGCTAAT+TGG | 0.300144 | 7.2:-31147888 | MS.gene27500:CDS |
| GCTTCTGAAGGCCTCTATTA+AGG | 0.306135 | 7.2:+31147911 | None:intergenic |
| TACCCATGATGCAAAAGTTT+TGG | 0.317269 | 7.2:+31149564 | None:intergenic |
| GTGTCACTGCTTCATCATTA+GGG | 0.339417 | 7.2:-31150938 | MS.gene27500:CDS |
| TTTCCAACCTCAAGCATATC+AGG | 0.349661 | 7.2:+31148693 | None:intergenic |
| CTTATTATCGCGATTAAGTT+CGG | 0.355063 | 7.2:+31149934 | None:intergenic |
| CATGGAGATAGTCTCTAATA+AGG | 0.359543 | 7.2:-31148392 | MS.gene27500:CDS |
| TGTTTGTGAGATGGTGGTTT+TGG | 0.366101 | 7.2:-31150988 | None:intergenic |
| AAGAAATCAACATTTCCTTC+TGG | 0.375662 | 7.2:-31149790 | MS.gene27500:CDS |
| TTGTCCAAGCAAGAGACCTT+TGG | 0.388653 | 7.2:-31147837 | MS.gene27500:CDS |
| CTGATGACATAAATGATTCA+TGG | 0.392813 | 7.2:-31149029 | MS.gene27500:CDS |
| TATTGTTCACTTCAGTTTGT+GGG | 0.408582 | 7.2:-31148646 | MS.gene27500:CDS |
| GCGTACAAGCTAAGAAAGTT+AGG | 0.409733 | 7.2:-31148255 | MS.gene27500:CDS |
| AGAAGTGTATCCAGCTTTAT+GGG | 0.412861 | 7.2:-31149082 | MS.gene27500:CDS |
| GCTGATGCCCTTGTTTCAAC+TGG | 0.414005 | 7.2:-31150115 | MS.gene27500:CDS |
| TATTGATATAACAGCTAATT+GGG | 0.420644 | 7.2:-31147887 | MS.gene27500:CDS |
| TGTCCAAGCAAGAGACCTTT+GGG | 0.423545 | 7.2:-31147836 | MS.gene27500:CDS |
| CCTTGGTAAAACTCCTCCTA+TGG | 0.424348 | 7.2:-31150868 | MS.gene27500:CDS |
| CCGAGCAAATACCAGTTTGC+CGG | 0.426356 | 7.2:+31150324 | None:intergenic |
| TTGTTGCTGCAGATGATTGT+TGG | 0.434548 | 7.2:-31149958 | MS.gene27500:intron |
| AGAAGAAACCTTCTTGCTAA+TGG | 0.435698 | 7.2:-31150891 | MS.gene27500:CDS |
| GCTAATGCCCGAGTCATAAC+AGG | 0.436420 | 7.2:+31149229 | None:intergenic |
| AACCTTCTTGCTAATGGCCT+TGG | 0.440891 | 7.2:-31150885 | MS.gene27500:CDS |
| GACCCTCTTGCATATTTGGT+TGG | 0.448523 | 7.2:-31150964 | MS.gene27500:CDS |
| ATATTGTTCACTTCAGTTTG+TGG | 0.449015 | 7.2:-31148647 | MS.gene27500:CDS |
| CTTGGAATTTATTCAGATGC+AGG | 0.449478 | 7.2:-31149724 | MS.gene27500:CDS |
| AGCTTTATGGGGTGCTAAAG+TGG | 0.461428 | 7.2:-31149070 | MS.gene27500:CDS |
| CCTCCCAAAGGTCTCTTGCT+TGG | 0.464465 | 7.2:+31147833 | None:intergenic |
| AGCATGCAAGACCTGGTGGC+TGG | 0.466104 | 7.2:-31148831 | MS.gene27500:CDS |
| GTGCTAAAGTGGGAAATAGT+TGG | 0.469009 | 7.2:-31149059 | MS.gene27500:CDS |
| GAAGTTATTGCAGTTAATCA+AGG | 0.470357 | 7.2:-31148370 | MS.gene27500:intron |
| TACCAAGGCCATTAGCAAGA+AGG | 0.473441 | 7.2:+31150883 | None:intergenic |
| TGTTGCTGCAGATGATTGTT+GGG | 0.474807 | 7.2:-31149957 | MS.gene27500:intron |
| TTATGTACCTATGTTGACAT+AGG | 0.479023 | 7.2:+31150072 | None:intergenic |
| AATAAAATGCCTGGTTCCCT+AGG | 0.483116 | 7.2:-31149604 | MS.gene27500:CDS |
| GCTGTTGTGTTCCTTAATAG+AGG | 0.483389 | 7.2:-31147922 | MS.gene27500:CDS |
| CATAGCAAGGGTCTTAAGCT+TGG | 0.485258 | 7.2:-31149742 | MS.gene27500:CDS |
| TCACATAGCGAAAAGAAGAT+TGG | 0.486370 | 7.2:+31149193 | None:intergenic |
| CAGTTTGTGGGCTATTTCAA+AGG | 0.488558 | 7.2:-31148634 | MS.gene27500:intron |
| ATGCTTGAGGTTGGAAATGG+AGG | 0.493055 | 7.2:-31148687 | MS.gene27500:CDS |
| GATATGCTTGAGGTTGGAAA+TGG | 0.493237 | 7.2:-31148690 | MS.gene27500:CDS |
| TATGATAACTGTAACAATGA+TGG | 0.496661 | 7.2:-31149435 | MS.gene27500:CDS |
| TGCAGATTATGTTCATAGCA+AGG | 0.510065 | 7.2:-31149755 | MS.gene27500:CDS |
| TCAACTGGTCTATATAAGCT+TGG | 0.514706 | 7.2:-31150100 | MS.gene27500:CDS |
| GCAAGACCTGGTGGCTGGAA+TGG | 0.519508 | 7.2:-31148826 | MS.gene27500:intron |
| TGATGACATAAATGATTCAT+GGG | 0.521279 | 7.2:-31149028 | MS.gene27500:CDS |
| CTTGGTAAAACTCCTCCTAT+GGG | 0.521865 | 7.2:-31150867 | MS.gene27500:CDS |
| ACATGTAGCAATAAAATGCC+TGG | 0.522248 | 7.2:-31149613 | MS.gene27500:CDS |
| AACTCATGACCTAGGGAACC+AGG | 0.526273 | 7.2:+31149595 | None:intergenic |
| GATCCTGATATGCTTGAGGT+TGG | 0.538064 | 7.2:-31148696 | MS.gene27500:CDS |
| TCATTAGGGAACAACTATGA+TGG | 0.538551 | 7.2:-31150924 | MS.gene27500:CDS |
| GCTAAGAAAGTTAGGATGGA+AGG | 0.541248 | 7.2:-31148247 | MS.gene27500:CDS |
| ACTTTAGCACCCCATAAAGC+TGG | 0.545198 | 7.2:+31149072 | None:intergenic |
| GCAGATTATGTTCATAGCAA+GGG | 0.548297 | 7.2:-31149754 | MS.gene27500:CDS |
| TTGGAATTTATTCAGATGCA+GGG | 0.559186 | 7.2:-31149723 | MS.gene27500:intron |
| CTTATTAGAGACTATCTCCA+TGG | 0.563876 | 7.2:+31148393 | None:intergenic |
| GCTACCCTATCTCCTAAAAG+AGG | 0.566788 | 7.2:+31147943 | None:intergenic |
| ACAAGCTAAGAAAGTTAGGA+TGG | 0.568444 | 7.2:-31148251 | MS.gene27500:CDS |
| TAGGTATCCTGTTATGACTC+GGG | 0.568609 | 7.2:-31149236 | MS.gene27500:CDS |
| CATCTTGAAACTCATGACCT+AGG | 0.568843 | 7.2:+31149587 | None:intergenic |
| TTATATCAATATGCTTCTGA+AGG | 0.572424 | 7.2:+31147899 | None:intergenic |
| ACATAAATGATTCATGGGAA+AGG | 0.572873 | 7.2:-31149023 | MS.gene27500:intron |
| ATCTTGAAACTCATGACCTA+GGG | 0.575933 | 7.2:+31149588 | None:intergenic |
| ATAGGTATCCTGTTATGACT+CGG | 0.580091 | 7.2:-31149237 | MS.gene27500:intron |
| TATCATACAGGTGGAACAGT+TGG | 0.580370 | 7.2:-31150382 | MS.gene27500:intron |
| GCTTTATGGGGTGCTAAAGT+GGG | 0.582782 | 7.2:-31149069 | MS.gene27500:CDS |
| ACATCGCAACCTAGAAGAAG+AGG | 0.583965 | 7.2:+31148436 | None:intergenic |
| GGATACACCTATGTCAACAT+AGG | 0.584008 | 7.2:-31150079 | MS.gene27500:intron |
| ACTCGGGCATTAGCGAAAGC+AGG | 0.584046 | 7.2:-31149220 | MS.gene27500:CDS |
| TATATAGACCAGTTGAAACA+AGG | 0.586502 | 7.2:+31150107 | None:intergenic |
| TTTATGCAGTATGATTTCAA+GGG | 0.593167 | 7.2:-31148878 | MS.gene27500:intron |
| AAATGTGACTAAAGAGACCA+TGG | 0.606791 | 7.2:-31148410 | MS.gene27500:CDS |
| TACAATGAATTACCTCCCAA+AGG | 0.608422 | 7.2:+31147821 | None:intergenic |
| AACAGATCCTGATATGCTTG+AGG | 0.609688 | 7.2:-31148700 | MS.gene27500:intron |
| CTTACCACGATAGATTCGCT+TGG | 0.612262 | 7.2:-31148277 | MS.gene27500:intron |
| ACAGCTAATTGGGATGACAT+TGG | 0.612622 | 7.2:-31147877 | MS.gene27500:CDS |
| TAGGATGGAAGGTGATGCTG+AGG | 0.614856 | 7.2:-31148236 | MS.gene27500:intron |
| GCAAGAGCTTTAATGCCAGA+AGG | 0.618630 | 7.2:+31149775 | None:intergenic |
| AAACCAACCAAATATGCAAG+AGG | 0.622631 | 7.2:+31150961 | None:intergenic |
| TGCTTGAGGTTGGAAATGGA+GGG | 0.639239 | 7.2:-31148686 | MS.gene27500:CDS |
| ATATAGACCAGTTGAAACAA+GGG | 0.648146 | 7.2:+31150108 | None:intergenic |
| TATGCTGAGCATGCAAGACC+TGG | 0.649983 | 7.2:-31148838 | MS.gene27500:CDS |
| GCTGAGCATGCAAGACCTGG+TGG | 0.651335 | 7.2:-31148835 | MS.gene27500:CDS |
| AATTTAGTGATATACCCCAT+AGG | 0.655568 | 7.2:+31150852 | None:intergenic |
| TTAGTGATATACCCCATAGG+AGG | 0.659380 | 7.2:+31150855 | None:intergenic |
| GAAGTGTATCCAGCTTTATG+GGG | 0.664588 | 7.2:-31149081 | MS.gene27500:CDS |
| AACCAACCAAATATGCAAGA+GGG | 0.677174 | 7.2:+31150962 | None:intergenic |
| TTGGTAAAACTCCTCCTATG+GGG | 0.687837 | 7.2:-31150866 | MS.gene27500:intron |
| CCAAGCAAGAGACCTTTGGG+AGG | 0.733936 | 7.2:-31147833 | MS.gene27500:intron |
| ATGGAACAAATGCCACTGTG+AGG | 0.770299 | 7.2:-31149416 | MS.gene27500:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAATAAAATACAAG+GGG | + | chr7.2:31148911-31148930 | None:intergenic | 10.0% |
| !! | GAATAAAAAATAAAATACAA+GGG | + | chr7.2:31148912-31148931 | None:intergenic | 10.0% |
| !! | TGAATAAAAAATAAAATACA+AGG | + | chr7.2:31148913-31148932 | None:intergenic | 10.0% |
| !! | AAAATCTTTAATAAACATAG+TGG | + | chr7.2:31150586-31150605 | None:intergenic | 15.0% |
| !! | ATAAAAAATAAAATACAAGG+GGG | + | chr7.2:31148910-31148929 | None:intergenic | 15.0% |
| !! | TTACTTTCTATTATGAATTA+TGG | - | chr7.2:31147874-31147893 | MS.gene27500:CDS | 15.0% |
| !! | AAATTGATGAAAAAATCATC+CGG | - | chr7.2:31148247-31148266 | MS.gene27500:CDS | 20.0% |
| !! | ACAAACAAATAAAGTTTCAT+TGG | + | chr7.2:31149482-31149501 | None:intergenic | 20.0% |
| !! | AGTAACATATTACAATGATT+AGG | + | chr7.2:31150276-31150295 | None:intergenic | 20.0% |
| !! | ATATTGATATAACAGCTAAT+TGG | - | chr7.2:31150702-31150721 | MS.gene27500:intron | 20.0% |
| !! | CAACAAAAAATTATGGATAA+AGG | + | chr7.2:31148618-31148637 | None:intergenic | 20.0% |
| !! | TAATCAAGTAAAATAACCAT+TGG | + | chr7.2:31149114-31149133 | None:intergenic | 20.0% |
| !! | TATTGATATAACAGCTAATT+GGG | - | chr7.2:31150703-31150722 | MS.gene27500:intron | 20.0% |
| !! | TATTGTGAAGTCAAAATATA+AGG | - | chr7.2:31150501-31150520 | MS.gene27500:intron | 20.0% |
| !! | TCTAAAGATTTATGATACTA+AGG | - | chr7.2:31148165-31148184 | MS.gene27500:intron | 20.0% |
| !! | TGATAAGATAAAAGTCTATT+AGG | + | chr7.2:31149251-31149270 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTTGGTTAGATAT+GGG | - | chr7.2:31150619-31150638 | MS.gene27500:intron | 20.0% |
| !!! | GGTTATTTTACTTGATTATA+GGG | - | chr7.2:31149116-31149135 | MS.gene27500:intron | 20.0% |
| !!! | TGAAACTTTATTTGTTTGTT+AGG | - | chr7.2:31149483-31149502 | MS.gene27500:intron | 20.0% |
| !!! | TGGTTATTTTACTTGATTAT+AGG | - | chr7.2:31149115-31149134 | MS.gene27500:intron | 20.0% |
| ! | ACCATGACATTCTTATATAT+AGG | - | chr7.2:31149335-31149354 | MS.gene27500:intron | 25.0% |
| ! | ACCTATATATAAGAATGTCA+TGG | + | chr7.2:31149339-31149358 | None:intergenic | 25.0% |
| ! | AGATGCATGTAAAATATCAA+TGG | + | chr7.2:31148148-31148167 | None:intergenic | 25.0% |
| ! | ATCAGCTATAATTAGTTGAT+AGG | + | chr7.2:31148105-31148124 | None:intergenic | 25.0% |
| ! | CATGATTTCACATAAATCAA+AGG | + | chr7.2:31150086-31150105 | None:intergenic | 25.0% |
| ! | CGAACTAATCTCTTATATAT+AGG | + | chr7.2:31148034-31148053 | None:intergenic | 25.0% |
| ! | GGCAAATTATTAAAACTGTA+AGG | + | chr7.2:31150565-31150584 | None:intergenic | 25.0% |
| ! | GTGTAGAAACTAATTCAAAT+AGG | - | chr7.2:31150060-31150079 | MS.gene27500:intron | 25.0% |
| ! | TAGCAATACTTTAATTAGCA+AGG | - | chr7.2:31147803-31147822 | MS.gene27500:intron | 25.0% |
| ! | TAGTATTATTTGTACGGAAT+TGG | - | chr7.2:31150413-31150432 | MS.gene27500:intron | 25.0% |
| ! | TATGATAACTGTAACAATGA+TGG | - | chr7.2:31149155-31149174 | MS.gene27500:intron | 25.0% |
| ! | TGATGACATAAATGATTCAT+GGG | - | chr7.2:31149562-31149581 | MS.gene27500:intron | 25.0% |
| ! | TTATATCAATATGCTTCTGA+AGG | + | chr7.2:31150694-31150713 | None:intergenic | 25.0% |
| ! | TTTATGCAGTATGATTTCAA+GGG | - | chr7.2:31149712-31149731 | MS.gene27500:intron | 25.0% |
| ! | TTTGGCTAAACAACTTAATT+AGG | - | chr7.2:31150017-31150036 | MS.gene27500:intron | 25.0% |
| !! | AATTAAGTTGTTTAGCCAAA+CGG | + | chr7.2:31150017-31150036 | None:intergenic | 25.0% |
| !! | CCAAATACTGTTATGTTTTA+GGG | - | chr7.2:31148764-31148783 | MS.gene27500:intron | 25.0% |
| !! | TATGTTTTACTACGTTTTGT+TGG | - | chr7.2:31150837-31150856 | MS.gene27500:intron | 25.0% |
| !! | TCATACGTAATTTTGAACTT+TGG | - | chr7.2:31149268-31149287 | MS.gene27500:intron | 25.0% |
| !! | TCCAAATACTGTTATGTTTT+AGG | - | chr7.2:31148763-31148782 | MS.gene27500:intron | 25.0% |
| !! | TTTTATGCAGTATGATTTCA+AGG | - | chr7.2:31149711-31149730 | MS.gene27500:intron | 25.0% |
| !!! | AATTCCTTCTCTTAATTTGT+TGG | - | chr7.2:31147757-31147776 | MS.gene27500:intron | 25.0% |
| !!! | ACATTTTTTTGCTATCATAC+AGG | - | chr7.2:31148196-31148215 | MS.gene27500:intron | 25.0% |
| !!! | CATGTTTTTTTGGTTAGATA+TGG | - | chr7.2:31150618-31150637 | MS.gene27500:intron | 25.0% |
| !!! | TGATTTGAGTTGAAGATTAA+AGG | + | chr7.2:31149304-31149323 | None:intergenic | 25.0% |
| !!! | TTCAGTGTTTTTACTTTGTA+AGG | - | chr7.2:31148569-31148588 | MS.gene27500:intron | 25.0% |
| !!! | TTCTTATCTGCATGTTTTTT+TGG | - | chr7.2:31150608-31150627 | MS.gene27500:intron | 25.0% |
| AAGAAATCAACATTTCCTTC+TGG | - | chr7.2:31148800-31148819 | MS.gene27500:intron | 30.0% | |
| AATTTAGTGATATACCCCAT+AGG | + | chr7.2:31147741-31147760 | None:intergenic | 30.0% | |
| ACATAAATGATTCATGGGAA+AGG | - | chr7.2:31149567-31149586 | MS.gene27500:CDS | 30.0% | |
| ATATAGACCAGTTGAAACAA+GGG | + | chr7.2:31148485-31148504 | None:intergenic | 30.0% | |
| ATATTGTTCACTTCAGTTTG+TGG | - | chr7.2:31149943-31149962 | MS.gene27500:CDS | 30.0% | |
| CAAATAAAGTTTCATTGGAG+AGG | + | chr7.2:31149477-31149496 | None:intergenic | 30.0% | |
| CCCTAAAACATAACAGTATT+TGG | + | chr7.2:31148767-31148786 | None:intergenic | 30.0% | |
| CGTCTCTAGTATTATTTGTA+CGG | - | chr7.2:31150407-31150426 | MS.gene27500:intron | 30.0% | |
| CTGATGACATAAATGATTCA+TGG | - | chr7.2:31149561-31149580 | MS.gene27500:intron | 30.0% | |
| CTTATTATCGCGATTAAGTT+CGG | + | chr7.2:31148659-31148678 | None:intergenic | 30.0% | |
| GAAGTTATTGCAGTTAATCA+AGG | - | chr7.2:31150220-31150239 | MS.gene27500:intron | 30.0% | |
| GAATCCAACAAATTAAGAGA+AGG | + | chr7.2:31147764-31147783 | None:intergenic | 30.0% | |
| GGATACTAAGGTTACAAATA+AGG | - | chr7.2:31150858-31150877 | MS.gene27500:intron | 30.0% | |
| TATATAGACCAGTTGAAACA+AGG | + | chr7.2:31148486-31148505 | None:intergenic | 30.0% | |
| TATTGTTCACTTCAGTTTGT+GGG | - | chr7.2:31149944-31149963 | MS.gene27500:CDS | 30.0% | |
| TCTGCAGCAACAAAAAATTA+TGG | + | chr7.2:31148625-31148644 | None:intergenic | 30.0% | |
| TTATGTACCTATGTTGACAT+AGG | + | chr7.2:31148521-31148540 | None:intergenic | 30.0% | |
| TTGGAATTTATTCAGATGCA+GGG | - | chr7.2:31148867-31148886 | MS.gene27500:CDS | 30.0% | |
| TTTATAGACATCTGAGAAAC+TGG | - | chr7.2:31148379-31148398 | MS.gene27500:CDS | 30.0% | |
| ! | ATTAAGTTGTTTAGCCAAAC+GGG | + | chr7.2:31150016-31150035 | None:intergenic | 30.0% |
| ! | TAAAACTGTAAGGCATTCAA+GGG | + | chr7.2:31150555-31150574 | None:intergenic | 30.0% |
| ! | TTAAAACTGTAAGGCATTCA+AGG | + | chr7.2:31150556-31150575 | None:intergenic | 30.0% |
| !! | GTTTTATTAGCTAGTAGCTA+AGG | + | chr7.2:31149684-31149703 | None:intergenic | 30.0% |
| !!! | CTTCTTTTTTTCACCTATGA+AGG | - | chr7.2:31150118-31150137 | MS.gene27500:intron | 30.0% |
| !!! | TGTTATGTTTTAGGGTAATC+TGG | - | chr7.2:31148772-31148791 | MS.gene27500:intron | 30.0% |
| !!! | TTTTTTTGCTATCATACAGG+TGG | - | chr7.2:31148199-31148218 | MS.gene27500:intron | 30.0% |
| AAACCAACCAAATATGCAAG+AGG | + | chr7.2:31147632-31147651 | None:intergenic | 35.0% | |
| AAACCATGCACTCAATTTGT+TGG | - | chr7.2:31149593-31149612 | MS.gene27500:CDS | 35.0% | |
| AAATGTGACTAAAGAGACCA+TGG | - | chr7.2:31150180-31150199 | MS.gene27500:intron | 35.0% | |
| AACCAACCAAATATGCAAGA+GGG | + | chr7.2:31147631-31147650 | None:intergenic | 35.0% | |
| ACAAGCTAAGAAAGTTAGGA+TGG | - | chr7.2:31150339-31150358 | MS.gene27500:CDS | 35.0% | |
| ACATGTAAGATACCTGTGAA+AGG | + | chr7.2:31148963-31148982 | None:intergenic | 35.0% | |
| ACATGTAGCAATAAAATGCC+TGG | - | chr7.2:31148977-31148996 | MS.gene27500:intron | 35.0% | |
| AGAAGAAACCTTCTTGCTAA+TGG | - | chr7.2:31147699-31147718 | MS.gene27500:intron | 35.0% | |
| ATAGGTATCCTGTTATGACT+CGG | - | chr7.2:31149353-31149372 | MS.gene27500:intron | 35.0% | |
| ATAGGTGAAAAAAAGAAGCC+AGG | + | chr7.2:31150116-31150135 | None:intergenic | 35.0% | |
| ATCAAGTGCTATGTAACCAA+TGG | - | chr7.2:31149095-31149114 | MS.gene27500:intron | 35.0% | |
| ATCTTGAAACTCATGACCTA+GGG | + | chr7.2:31149005-31149024 | None:intergenic | 35.0% | |
| CATGGAGATAGTCTCTAATA+AGG | - | chr7.2:31150198-31150217 | MS.gene27500:intron | 35.0% | |
| CGAACTTAATCGCGATAATA+AGG | - | chr7.2:31148657-31148676 | MS.gene27500:CDS | 35.0% | |
| CTTATTAGAGACTATCTCCA+TGG | + | chr7.2:31150200-31150219 | None:intergenic | 35.0% | |
| CTTGGAATTTATTCAGATGC+AGG | - | chr7.2:31148866-31148885 | MS.gene27500:CDS | 35.0% | |
| GCAGATTATGTTCATAGCAA+GGG | - | chr7.2:31148836-31148855 | MS.gene27500:CDS | 35.0% | |
| GTGAAATCATGTATTGTACC+TGG | - | chr7.2:31150095-31150114 | MS.gene27500:CDS | 35.0% | |
| TACAATGAATTACCTCCCAA+AGG | + | chr7.2:31150772-31150791 | None:intergenic | 35.0% | |
| TCACATAGCGAAAAGAAGAT+TGG | + | chr7.2:31149400-31149419 | None:intergenic | 35.0% | |
| TCATTAGGGAACAACTATGA+TGG | - | chr7.2:31147666-31147685 | MS.gene27500:CDS | 35.0% | |
| TGCAGATTATGTTCATAGCA+AGG | - | chr7.2:31148835-31148854 | MS.gene27500:CDS | 35.0% | |
| ! | AGAAGTGTATCCAGCTTTAT+GGG | - | chr7.2:31149508-31149527 | MS.gene27500:intron | 35.0% |
| ! | ATGCCAAAACTTTTGCATCA+TGG | - | chr7.2:31149023-31149042 | MS.gene27500:intron | 35.0% |
| ! | TACCCATGATGCAAAAGTTT+TGG | + | chr7.2:31149029-31149048 | None:intergenic | 35.0% |
| ! | TCAACTGGTCTATATAAGCT+TGG | - | chr7.2:31148490-31148509 | MS.gene27500:intron | 35.0% |
| ! | TCTTCTTTTCGCTATGTGAA+TGG | - | chr7.2:31149401-31149420 | MS.gene27500:intron | 35.0% |
| ! | TGCCAAAACTTTTGCATCAT+GGG | - | chr7.2:31149024-31149043 | MS.gene27500:CDS | 35.0% |
| ! | TTAAGTTGTTTAGCCAAACG+GGG | + | chr7.2:31150015-31150034 | None:intergenic | 35.0% |
| !! | CTACGTTTTGTTGGATACTA+AGG | - | chr7.2:31150846-31150865 | MS.gene27500:intron | 35.0% |
| !! | TATTTTTGACTACCTCACAG+TGG | + | chr7.2:31149189-31149208 | None:intergenic | 35.0% |
| !!! | ATGTTTTAGGGTAATCTGGT+GGG | - | chr7.2:31148776-31148795 | MS.gene27500:intron | 35.0% |
| !!! | TATGTTTTAGGGTAATCTGG+TGG | - | chr7.2:31148775-31148794 | MS.gene27500:intron | 35.0% |
| !!! | TTTTTTGGTTAGATATGGGC+AGG | - | chr7.2:31150623-31150642 | MS.gene27500:intron | 35.0% |
| AACAGATCCTGATATGCTTG+AGG | - | chr7.2:31149890-31149909 | MS.gene27500:intron | 40.0% | |
| AATAAAATGCCTGGTTCCCT+AGG | - | chr7.2:31148986-31149005 | MS.gene27500:intron | 40.0% | |
| ACAGCTAATTGGGATGACAT+TGG | - | chr7.2:31150713-31150732 | MS.gene27500:intron | 40.0% | |
| AGCCTGCAATAAACCTTCAT+AGG | + | chr7.2:31150134-31150153 | None:intergenic | 40.0% | |
| AGCTAGTAGCTAAGGATAGT+AGG | + | chr7.2:31149676-31149695 | None:intergenic | 40.0% | |
| CACCTATGAAGGTTTATTGC+AGG | - | chr7.2:31150129-31150148 | MS.gene27500:intron | 40.0% | |
| CATCTTGAAACTCATGACCT+AGG | + | chr7.2:31149006-31149025 | None:intergenic | 40.0% | |
| CTTGGTAAAACTCCTCCTAT+GGG | - | chr7.2:31147723-31147742 | MS.gene27500:intron | 40.0% | |
| GAAAAAATCATCCGGCAAAC+TGG | - | chr7.2:31148255-31148274 | MS.gene27500:CDS | 40.0% | |
| GAATTGGATTCTCTGCTGTT+CGG | - | chr7.2:31150429-31150448 | MS.gene27500:intron | 40.0% | |
| GATATGCTTGAGGTTGGAAA+TGG | - | chr7.2:31149900-31149919 | MS.gene27500:intron | 40.0% | |
| GCGTACAAGCTAAGAAAGTT+AGG | - | chr7.2:31150335-31150354 | MS.gene27500:intron | 40.0% | |
| GCTAAGAAAGTTAGGATGGA+AGG | - | chr7.2:31150343-31150362 | MS.gene27500:CDS | 40.0% | |
| GCTGTTGTGTTCCTTAATAG+AGG | - | chr7.2:31150668-31150687 | MS.gene27500:intron | 40.0% | |
| GGATACACCTATGTCAACAT+AGG | - | chr7.2:31148511-31148530 | MS.gene27500:intron | 40.0% | |
| GGCGTACAATCTTAATCCAA+CGG | - | chr7.2:31150522-31150541 | MS.gene27500:intron | 40.0% | |
| GTACCAACAAATTGAGTGCA+TGG | + | chr7.2:31149599-31149618 | None:intergenic | 40.0% | |
| GTGCTAAAGTGGGAAATAGT+TGG | - | chr7.2:31149531-31149550 | MS.gene27500:intron | 40.0% | |
| TAGGTATCCTGTTATGACTC+GGG | - | chr7.2:31149354-31149373 | MS.gene27500:intron | 40.0% | |
| TATCATACAGGTGGAACAGT+TGG | - | chr7.2:31148208-31148227 | MS.gene27500:intron | 40.0% | |
| TCTTTATGCTGACCTTTCAC+AGG | - | chr7.2:31148948-31148967 | MS.gene27500:intron | 40.0% | |
| TGTTGCTGCAGATGATTGTT+GGG | - | chr7.2:31148633-31148652 | MS.gene27500:intron | 40.0% | |
| TTAGTGATATACCCCATAGG+AGG | + | chr7.2:31147738-31147757 | None:intergenic | 40.0% | |
| TTGGTAAAACTCCTCCTATG+GGG | - | chr7.2:31147724-31147743 | MS.gene27500:intron | 40.0% | |
| TTGTTGCTGCAGATGATTGT+TGG | - | chr7.2:31148632-31148651 | MS.gene27500:intron | 40.0% | |
| TTTCCAACCTCAAGCATATC+AGG | + | chr7.2:31149900-31149919 | None:intergenic | 40.0% | |
| ! | CAGTTTGTGGGCTATTTCAA+AGG | - | chr7.2:31149956-31149975 | MS.gene27500:intron | 40.0% |
| ! | CTTGCTTGGACAACAGTTTT+TGG | + | chr7.2:31150746-31150765 | None:intergenic | 40.0% |
| ! | GAAGTGTATCCAGCTTTATG+GGG | - | chr7.2:31149509-31149528 | MS.gene27500:intron | 40.0% |
| ! | GAGAAGTGTATCCAGCTTTA+TGG | - | chr7.2:31149507-31149526 | MS.gene27500:intron | 40.0% |
| ! | GTGTCACTGCTTCATCATTA+GGG | - | chr7.2:31147652-31147671 | MS.gene27500:CDS | 40.0% |
| ! | TGTGTCACTGCTTCATCATT+AGG | - | chr7.2:31147651-31147670 | MS.gene27500:CDS | 40.0% |
| !! | AGGTCCTCTTTTAGGAGATA+GGG | - | chr7.2:31150643-31150662 | MS.gene27500:intron | 40.0% |
| AACCTTCTTGCTAATGGCCT+TGG | - | chr7.2:31147705-31147724 | MS.gene27500:intron | 45.0% | |
| ACATCGCAACCTAGAAGAAG+AGG | + | chr7.2:31150157-31150176 | None:intergenic | 45.0% | |
| ACTTTAGCACCCCATAAAGC+TGG | + | chr7.2:31149521-31149540 | None:intergenic | 45.0% | |
| ATGCTTGAGGTTGGAAATGG+AGG | - | chr7.2:31149903-31149922 | MS.gene27500:intron | 45.0% | |
| ATGGAACAAATGCCACTGTG+AGG | - | chr7.2:31149174-31149193 | MS.gene27500:intron | 45.0% | |
| CATAGCAAGGGTCTTAAGCT+TGG | - | chr7.2:31148848-31148867 | MS.gene27500:CDS | 45.0% | |
| CCTTGGTAAAACTCCTCCTA+TGG | - | chr7.2:31147722-31147741 | MS.gene27500:intron | 45.0% | |
| CTTACCACGATAGATTCGCT+TGG | - | chr7.2:31150313-31150332 | MS.gene27500:intron | 45.0% | |
| GACCCTCTTGCATATTTGGT+TGG | - | chr7.2:31147626-31147645 | MS.gene27500:CDS | 45.0% | |
| GATCCTGATATGCTTGAGGT+TGG | - | chr7.2:31149894-31149913 | MS.gene27500:intron | 45.0% | |
| GCTACCCTATCTCCTAAAAG+AGG | + | chr7.2:31150650-31150669 | None:intergenic | 45.0% | |
| TACCAAGGCCATTAGCAAGA+AGG | + | chr7.2:31147710-31147729 | None:intergenic | 45.0% | |
| TGCTTGAGGTTGGAAATGGA+GGG | - | chr7.2:31149904-31149923 | MS.gene27500:intron | 45.0% | |
| TGGTGACCCTCTTGCATATT+TGG | - | chr7.2:31147622-31147641 | MS.gene27500:CDS | 45.0% | |
| TGTCCAAGCAAGAGACCTTT+GGG | - | chr7.2:31150754-31150773 | MS.gene27500:intron | 45.0% | |
| TTGTCCAAGCAAGAGACCTT+TGG | - | chr7.2:31150753-31150772 | MS.gene27500:intron | 45.0% | |
| ! | AGCTTTATGGGGTGCTAAAG+TGG | - | chr7.2:31149520-31149539 | MS.gene27500:intron | 45.0% |
| ! | ATATGGGCAGGTCCTCTTTT+AGG | - | chr7.2:31150635-31150654 | MS.gene27500:intron | 45.0% |
| ! | ATTTTACCATTCCAGCCACC+AGG | + | chr7.2:31149773-31149792 | None:intergenic | 45.0% |
| ! | CCATAGGAGGAGTTTTACCA+AGG | + | chr7.2:31147725-31147744 | None:intergenic | 45.0% |
| ! | GCAAGAGCTTTAATGCCAGA+AGG | + | chr7.2:31148818-31148837 | None:intergenic | 45.0% |
| ! | GCTTCTGAAGGCCTCTATTA+AGG | + | chr7.2:31150682-31150701 | None:intergenic | 45.0% |
| ! | GCTTTATGGGGTGCTAAAGT+GGG | - | chr7.2:31149521-31149540 | MS.gene27500:intron | 45.0% |
| ! | GTAAGGCATTCAAGGGATCT+TGG | + | chr7.2:31150548-31150567 | None:intergenic | 45.0% |
| ! | TGGAGAGGAGTACGTAACAT+TGG | + | chr7.2:31149462-31149481 | None:intergenic | 45.0% |
| !! | AAACAAGGGCATCAGCTGTA+AGG | + | chr7.2:31148471-31148490 | None:intergenic | 45.0% |
| !! | CAGGTCCTCTTTTAGGAGAT+AGG | - | chr7.2:31150642-31150661 | MS.gene27500:intron | 45.0% |
| !! | GCTTGGACAACAGTTTTTGG+AGG | + | chr7.2:31150743-31150762 | None:intergenic | 45.0% |
| AACTCATGACCTAGGGAACC+AGG | + | chr7.2:31148998-31149017 | None:intergenic | 50.0% | |
| ATTCAAGGGATCTTGGCCGT+TGG | + | chr7.2:31150541-31150560 | None:intergenic | 50.0% | |
| CATGTATCTTGAGCCCCGTT+TGG | - | chr7.2:31149999-31150018 | MS.gene27500:intron | 50.0% | |
| CCGAGCAAATACCAGTTTGC+CGG | + | chr7.2:31148269-31148288 | None:intergenic | 50.0% | |
| CCGGCAAACTGGTATTTGCT+CGG | - | chr7.2:31148266-31148285 | MS.gene27500:CDS | 50.0% | |
| GCTAATGCCCGAGTCATAAC+AGG | + | chr7.2:31149364-31149383 | None:intergenic | 50.0% | |
| TACGCCAAGCGAATCTATCG+TGG | + | chr7.2:31150320-31150339 | None:intergenic | 50.0% | |
| TAGGATGGAAGGTGATGCTG+AGG | - | chr7.2:31150354-31150373 | MS.gene27500:CDS | 50.0% | |
| TATGCTGAGCATGCAAGACC+TGG | - | chr7.2:31149752-31149771 | MS.gene27500:CDS | 50.0% | |
| TTGCAGGCTCCTCTTCTTCT+AGG | - | chr7.2:31150145-31150164 | MS.gene27500:intron | 50.0% | |
| ! | GCTGATGCCCTTGTTTCAAC+TGG | - | chr7.2:31148475-31148494 | MS.gene27500:intron | 50.0% |
| ACTCGGGCATTAGCGAAAGC+AGG | - | chr7.2:31149370-31149389 | MS.gene27500:intron | 55.0% | |
| CCAAGCAAGAGACCTTTGGG+AGG | - | chr7.2:31150757-31150776 | MS.gene27500:intron | 55.0% | |
| CCTCCCAAAGGTCTCTTGCT+TGG | + | chr7.2:31150760-31150779 | None:intergenic | 55.0% | |
| AGCATGCAAGACCTGGTGGC+TGG | - | chr7.2:31149759-31149778 | MS.gene27500:CDS | 60.0% | |
| GCAAGACCTGGTGGCTGGAA+TGG | - | chr7.2:31149764-31149783 | MS.gene27500:CDS | 60.0% | |
| GCTGAGCATGCAAGACCTGG+TGG | - | chr7.2:31149755-31149774 | MS.gene27500:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 31147612 | 31151000 | 31147612 | ID=MS.gene27500 |
| chr7.2 | mRNA | 31147612 | 31151000 | 31147612 | ID=MS.gene27500.t1;Parent=MS.gene27500 |
| chr7.2 | exon | 31150867 | 31151000 | 31150867 | ID=MS.gene27500.t1.exon1;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31150867 | 31151000 | 31150867 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31150336 | 31150394 | 31150336 | ID=MS.gene27500.t1.exon2;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31150336 | 31150394 | 31150336 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31150080 | 31150136 | 31150080 | ID=MS.gene27500.t1.exon3;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31150080 | 31150136 | 31150080 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31149934 | 31149968 | 31149934 | ID=MS.gene27500.t1.exon4;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31149934 | 31149968 | 31149934 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31149724 | 31149827 | 31149724 | ID=MS.gene27500.t1.exon5;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31149724 | 31149827 | 31149724 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31149567 | 31149642 | 31149567 | ID=MS.gene27500.t1.exon6;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31149567 | 31149642 | 31149567 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31149417 | 31149475 | 31149417 | ID=MS.gene27500.t1.exon7;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31149417 | 31149475 | 31149417 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31149190 | 31149255 | 31149190 | ID=MS.gene27500.t1.exon8;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31149190 | 31149255 | 31149190 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31149024 | 31149107 | 31149024 | ID=MS.gene27500.t1.exon9;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31149024 | 31149107 | 31149024 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31148827 | 31148891 | 31148827 | ID=MS.gene27500.t1.exon10;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31148827 | 31148891 | 31148827 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31148635 | 31148717 | 31148635 | ID=MS.gene27500.t1.exon11;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31148635 | 31148717 | 31148635 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31148371 | 31148461 | 31148371 | ID=MS.gene27500.t1.exon12;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31148371 | 31148461 | 31148371 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31148237 | 31148286 | 31148237 | ID=MS.gene27500.t1.exon13;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31148237 | 31148286 | 31148237 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31147834 | 31147977 | 31147834 | ID=MS.gene27500.t1.exon14;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31147834 | 31147977 | 31147834 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| chr7.2 | exon | 31147612 | 31147704 | 31147612 | ID=MS.gene27500.t1.exon15;Parent=MS.gene27500.t1 |
| chr7.2 | CDS | 31147612 | 31147704 | 31147612 | ID=cds.MS.gene27500.t1;Parent=MS.gene27500.t1 |
| Gene Sequence |
| Protein sequence |
