Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92764.t1 | RHN46708.1 | 96.3 | 408 | 12 | 2 | 4 | 410 | 3 | 408 | 1.40E-233 | 818.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92764.t1 | Q9FT97 | 75.9 | 402 | 97 | 0 | 9 | 410 | 9 | 410 | 6.7e-189 | 661.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92764.t1 | A0A396H1S7 | 96.3 | 408 | 12 | 2 | 4 | 410 | 3 | 408 | 9.8e-234 | 818.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene92764 | 0.807987 | 3.86E-50 | -1.69E-46 |
| MS.gene049151 | MS.gene92764 | 0.827654 | 1.39E-54 | -1.69E-46 |
| MS.gene049153 | MS.gene92764 | 0.811563 | 6.58E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene92764 | 0.821497 | 3.91E-53 | -1.69E-46 |
| MS.gene049297 | MS.gene92764 | 0.814053 | 1.87E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene92764 | 0.825913 | 3.62E-54 | -1.69E-46 |
| MS.gene049382 | MS.gene92764 | 0.806322 | 8.70E-50 | -1.69E-46 |
| MS.gene049444 | MS.gene92764 | 0.82688 | 2.13E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene92764 | 0.848679 | 5.26E-60 | -1.69E-46 |
| MS.gene049915 | MS.gene92764 | 0.801113 | 1.05E-48 | -1.69E-46 |
| MS.gene050128 | MS.gene92764 | 0.802766 | 4.80E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene92764 | 0.839837 | 1.25E-57 | -1.69E-46 |
| MS.gene050227 | MS.gene92764 | 0.82356 | 1.30E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene92764 | 0.825694 | 4.08E-54 | -1.69E-46 |
| MS.gene050330 | MS.gene92764 | -0.829315 | 5.52E-55 | -1.69E-46 |
| MS.gene050558 | MS.gene92764 | 0.811434 | 7.01E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene92764 | -0.859117 | 5.16E-63 | -1.69E-46 |
| MS.gene050642 | MS.gene92764 | 0.815988 | 6.97E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene92764 | 0.831966 | 1.24E-55 | -1.69E-46 |
| MS.gene050763 | MS.gene92764 | 0.832397 | 9.68E-56 | -1.69E-46 |
| MS.gene050987 | MS.gene92764 | 0.83317 | 6.22E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene92764 | 0.829624 | 4.64E-55 | -1.69E-46 |
| MS.gene051662 | MS.gene92764 | 0.813308 | 2.73E-51 | -1.69E-46 |
| MS.gene051663 | MS.gene92764 | 0.846651 | 1.90E-59 | -1.69E-46 |
| MS.gene051860 | MS.gene92764 | 0.813662 | 2.29E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene92764 | 0.826764 | 2.27E-54 | -1.69E-46 |
| MS.gene052077 | MS.gene92764 | 0.800529 | 1.38E-48 | -1.69E-46 |
| MS.gene052176 | MS.gene92764 | 0.836284 | 1.02E-56 | -1.69E-46 |
| MS.gene052286 | MS.gene92764 | 0.812876 | 3.40E-51 | -1.69E-46 |
| MS.gene052302 | MS.gene92764 | 0.817258 | 3.62E-52 | -1.69E-46 |
| MS.gene052309 | MS.gene92764 | -0.822738 | 2.02E-53 | -1.69E-46 |
| MS.gene052376 | MS.gene92764 | 0.816005 | 6.91E-52 | -1.69E-46 |
| MS.gene052856 | MS.gene92764 | 0.834259 | 3.32E-56 | -1.69E-46 |
| MS.gene052858 | MS.gene92764 | 0.816414 | 5.60E-52 | -1.69E-46 |
| MS.gene052860 | MS.gene92764 | 0.812556 | 3.99E-51 | -1.69E-46 |
| MS.gene053073 | MS.gene92764 | 0.802202 | 6.27E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene92764 | 0.828558 | 8.41E-55 | -1.69E-46 |
| MS.gene053559 | MS.gene92764 | 0.82218 | 2.72E-53 | -1.69E-46 |
| MS.gene053577 | MS.gene92764 | 0.802768 | 4.80E-49 | -1.69E-46 |
| MS.gene053630 | MS.gene92764 | 0.811972 | 5.36E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene92764 | 0.85236 | 4.86E-61 | -1.69E-46 |
| MS.gene054184 | MS.gene92764 | 0.802217 | 6.23E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene92764 | 0.839394 | 1.63E-57 | -1.69E-46 |
| MS.gene054542 | MS.gene92764 | 0.811219 | 7.81E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene92764 | 0.876926 | 9.47E-69 | -1.69E-46 |
| MS.gene054942 | MS.gene92764 | 0.806625 | 7.51E-50 | -1.69E-46 |
| MS.gene055133 | MS.gene92764 | 0.816909 | 4.34E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene92764 | 0.804 | 2.67E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene92764 | -0.833681 | 4.64E-56 | -1.69E-46 |
| MS.gene056875 | MS.gene92764 | 0.813519 | 2.46E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene92764 | 0.815014 | 1.15E-51 | -1.69E-46 |
| MS.gene057260 | MS.gene92764 | 0.800675 | 1.29E-48 | -1.69E-46 |
| MS.gene057750 | MS.gene92764 | 0.825073 | 5.72E-54 | -1.69E-46 |
| MS.gene057754 | MS.gene92764 | 0.835168 | 1.96E-56 | -1.69E-46 |
| MS.gene05795 | MS.gene92764 | 0.803806 | 2.92E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene92764 | 0.808 | 3.84E-50 | -1.69E-46 |
| MS.gene058182 | MS.gene92764 | 0.834623 | 2.69E-56 | -1.69E-46 |
| MS.gene058399 | MS.gene92764 | 0.847833 | 9.01E-60 | -1.69E-46 |
| MS.gene058749 | MS.gene92764 | 0.849408 | 3.30E-60 | -1.69E-46 |
| MS.gene058833 | MS.gene92764 | 0.801076 | 1.07E-48 | -1.69E-46 |
| MS.gene058845 | MS.gene92764 | 0.800297 | 1.54E-48 | -1.69E-46 |
| MS.gene059285 | MS.gene92764 | 0.800506 | 1.40E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene92764 | 0.821032 | 5.01E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene92764 | 0.815017 | 1.15E-51 | -1.69E-46 |
| MS.gene059899 | MS.gene92764 | 0.853199 | 2.80E-61 | -1.69E-46 |
| MS.gene060084 | MS.gene92764 | 0.863748 | 1.99E-64 | -1.69E-46 |
| MS.gene060297 | MS.gene92764 | 0.821953 | 3.07E-53 | -1.69E-46 |
| MS.gene060476 | MS.gene92764 | 0.811189 | 7.93E-51 | -1.69E-46 |
| MS.gene060495 | MS.gene92764 | 0.82664 | 2.43E-54 | -1.69E-46 |
| MS.gene060619 | MS.gene92764 | 0.810285 | 1.24E-50 | -1.69E-46 |
| MS.gene060683 | MS.gene92764 | 0.824238 | 9.00E-54 | -1.69E-46 |
| MS.gene060685 | MS.gene92764 | 0.818696 | 1.71E-52 | -1.69E-46 |
| MS.gene060998 | MS.gene92764 | 0.815537 | 8.79E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene92764 | 0.822657 | 2.11E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013419 | MS.gene92764 | PPI |
| MS.gene06516 | MS.gene92764 | PPI |
| MS.gene86814 | MS.gene92764 | PPI |
| MS.gene059347 | MS.gene92764 | PPI |
| MS.gene062192 | MS.gene92764 | PPI |
| MS.gene05536 | MS.gene92764 | PPI |
| MS.gene07480 | MS.gene92764 | PPI |
| MS.gene61401 | MS.gene92764 | PPI |
| MS.gene052453 | MS.gene92764 | PPI |
| MS.gene83318 | MS.gene92764 | PPI |
| MS.gene062191 | MS.gene92764 | PPI |
| MS.gene05535 | MS.gene92764 | PPI |
| MS.gene07479 | MS.gene92764 | PPI |
| MS.gene004947 | MS.gene92764 | PPI |
| MS.gene92764 | MS.gene61402 | PPI |
| MS.gene049391 | MS.gene92764 | PPI |
| MS.gene005005 | MS.gene92764 | PPI |
| MS.gene042962 | MS.gene92764 | PPI |
| MS.gene92764 | MS.gene052452 | PPI |
| MS.gene042963 | MS.gene92764 | PPI |
| MS.gene069814 | MS.gene92764 | PPI |
| MS.gene004948 | MS.gene92764 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92764.t1 | MTR_7g073650 | 96.078 | 408 | 13 | 2 | 4 | 410 | 3 | 408 | 0.0 | 805 |
| MS.gene92764.t1 | MTR_7g073640 | 92.060 | 403 | 30 | 2 | 9 | 410 | 8 | 409 | 0.0 | 768 |
| MS.gene92764.t1 | MTR_6g069140 | 65.946 | 370 | 125 | 1 | 39 | 408 | 51 | 419 | 0.0 | 526 |
| MS.gene92764.t1 | MTR_1g077520 | 61.084 | 406 | 155 | 2 | 6 | 410 | 6 | 409 | 0.0 | 524 |
| MS.gene92764.t1 | MTR_1g077480 | 64.690 | 371 | 130 | 1 | 38 | 408 | 42 | 411 | 0.0 | 523 |
| MS.gene92764.t1 | MTR_6g086575 | 61.000 | 400 | 153 | 3 | 10 | 408 | 7 | 404 | 0.0 | 520 |
| MS.gene92764.t1 | MTR_6g086625 | 60.848 | 401 | 153 | 3 | 10 | 408 | 7 | 405 | 0.0 | 520 |
| MS.gene92764.t1 | MTR_3g094160 | 56.010 | 416 | 165 | 4 | 10 | 408 | 11 | 425 | 7.70e-167 | 475 |
| MS.gene92764.t1 | MTR_1g077520 | 64.615 | 325 | 115 | 0 | 10 | 334 | 10 | 334 | 5.66e-157 | 446 |
| MS.gene92764.t1 | MTR_0279s0030 | 90.400 | 125 | 11 | 1 | 287 | 410 | 101 | 225 | 4.80e-75 | 233 |
| MS.gene92764.t1 | MTR_0279s0030 | 90.400 | 125 | 11 | 1 | 287 | 410 | 185 | 309 | 1.80e-73 | 232 |
| MS.gene92764.t1 | MTR_0279s0030 | 90.400 | 125 | 11 | 1 | 287 | 410 | 250 | 374 | 3.48e-73 | 233 |
| MS.gene92764.t1 | MTR_1g078410 | 43.556 | 225 | 68 | 3 | 10 | 226 | 5 | 178 | 3.03e-49 | 165 |
| MS.gene92764.t1 | MTR_2g096530 | 27.701 | 361 | 171 | 13 | 43 | 315 | 27 | 385 | 5.56e-22 | 98.6 |
| MS.gene92764.t1 | MTR_8g089725 | 26.282 | 468 | 227 | 19 | 54 | 406 | 38 | 502 | 3.37e-21 | 95.9 |
| MS.gene92764.t1 | MTR_8g089740 | 26.396 | 394 | 189 | 14 | 11 | 318 | 3 | 381 | 7.89e-21 | 95.1 |
| MS.gene92764.t1 | MTR_8g089745 | 24.682 | 393 | 196 | 12 | 11 | 318 | 8 | 385 | 8.92e-21 | 94.4 |
| MS.gene92764.t1 | MTR_8g089745 | 24.682 | 393 | 196 | 12 | 11 | 318 | 8 | 385 | 1.82e-20 | 94.0 |
| MS.gene92764.t1 | MTR_8g089735 | 26.068 | 468 | 228 | 19 | 54 | 406 | 38 | 502 | 1.95e-20 | 93.6 |
| MS.gene92764.t1 | MTR_3g086580 | 24.438 | 356 | 177 | 11 | 50 | 315 | 36 | 389 | 1.91e-18 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92764.t1 | AT5G08380 | 74.634 | 410 | 104 | 0 | 1 | 410 | 1 | 410 | 0.0 | 650 |
| MS.gene92764.t1 | AT5G08370 | 66.484 | 364 | 121 | 1 | 43 | 406 | 29 | 391 | 0.0 | 526 |
| MS.gene92764.t1 | AT5G08370 | 66.120 | 366 | 123 | 1 | 41 | 406 | 1 | 365 | 0.0 | 525 |
| MS.gene92764.t1 | AT5G08380 | 76.266 | 316 | 75 | 0 | 1 | 316 | 1 | 316 | 0.0 | 509 |
| MS.gene92764.t1 | AT3G56310 | 58.656 | 387 | 154 | 3 | 25 | 408 | 46 | 429 | 3.88e-164 | 468 |
| MS.gene92764.t1 | AT3G56310 | 55.039 | 387 | 144 | 4 | 25 | 408 | 46 | 405 | 1.48e-147 | 425 |
| MS.gene92764.t1 | AT3G26380 | 24.148 | 352 | 177 | 11 | 54 | 318 | 42 | 390 | 5.28e-18 | 86.3 |
| MS.gene92764.t1 | AT3G26380 | 24.148 | 352 | 177 | 11 | 54 | 318 | 42 | 390 | 9.72e-18 | 85.9 |
Find 99 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAGGCTCCTCTTCTTCT+AGG | 0.178877 | 7.4:-31060467 | MS.gene92764:intron |
| ATATGGGCAGGTCCTCTTTC+AGG | 0.213190 | 7.4:-31059961 | MS.gene92764:CDS |
| CTGGTGACATAACCGATAAT+TGG | 0.234201 | 7.4:-31061147 | MS.gene92764:CDS |
| AGATTAATGTAACAGCTAAT+TGG | 0.263880 | 7.4:-31059897 | MS.gene92764:CDS |
| CGAACTTAATCGCGATAATA+AGG | 0.278598 | 7.4:-31062180 | MS.gene92764:intron |
| GAGATATGCATCCAGCTAAA+TGG | 0.281278 | 7.4:-31061201 | MS.gene92764:CDS |
| ATTTGAGATGGTGGTGGTTT+TGG | 0.309054 | 7.4:-31062934 | MS.gene92764:CDS |
| TACCCATGATGCAAAAGTTT+TGG | 0.334662 | 7.4:+31061811 | None:intergenic |
| TTTCCAACCTCAAGCATATC+AGG | 0.349661 | 7.4:+31060802 | None:intergenic |
| CTTATTATCGCGATTAAGTT+CGG | 0.355063 | 7.4:+31062181 | None:intergenic |
| AGAAGAAACCTTCTTGCTAA+TGG | 0.364226 | 7.4:-31062831 | MS.gene92764:CDS |
| TTGTTCAAGCAAGAGACCTT+TGG | 0.381720 | 7.4:-31059846 | MS.gene92764:CDS |
| GCTTGGCGTACAAGCTAAAA+AGG | 0.382915 | 7.4:-31060273 | MS.gene92764:CDS |
| CTTGGAGATAGTCTCTAATA+AGG | 0.383311 | 7.4:-31060414 | MS.gene92764:CDS |
| AGAATGAGGAGTAGTAAGAT+TGG | 0.388035 | 7.4:-31062957 | MS.gene92764:CDS |
| GCTGTTGTGTTGCTTAATAA+AGG | 0.393013 | 7.4:-31059928 | MS.gene92764:CDS |
| TGTTCAAGCAAGAGACCTTT+GGG | 0.394528 | 7.4:-31059845 | MS.gene92764:CDS |
| AGATATGCATCCAGCTAAAT+GGG | 0.395124 | 7.4:-31061200 | MS.gene92764:CDS |
| GATTAATGTAACAGCTAATT+GGG | 0.410058 | 7.4:-31059896 | MS.gene92764:CDS |
| AGGTCCTCTTTCAGGATATA+GGG | 0.411330 | 7.4:-31059953 | MS.gene92764:CDS |
| GCTGATGCCCTTGTTTCAAC+TGG | 0.414005 | 7.4:-31062373 | MS.gene92764:CDS |
| CAGGTCCTCTTTCAGGATAT+AGG | 0.414530 | 7.4:-31059954 | MS.gene92764:CDS |
| ATGAGAAAATACCAGTTTCT+CGG | 0.417413 | 7.4:+31062543 | None:intergenic |
| ATTAAAGCCCGAGTCATAAC+AGG | 0.421626 | 7.4:+31061510 | None:intergenic |
| TGTTATACAGGTGGAATAGT+TGG | 0.421868 | 7.4:-31062601 | MS.gene92764:intron |
| CCTTGGTAAAACTCCTCCTA+TGG | 0.424348 | 7.4:-31062808 | MS.gene92764:CDS |
| TATCGTTCACTTCAGTTTGT+GGG | 0.428514 | 7.4:-31060755 | MS.gene92764:CDS |
| TGGTGACATAACCGATAATT+GGG | 0.429608 | 7.4:-31061146 | MS.gene92764:CDS |
| ATATCGTTCACTTCAGTTTG+TGG | 0.432561 | 7.4:-31060756 | MS.gene92764:CDS |
| TTGTTGCTGCAGATGATTGT+TGG | 0.434548 | 7.4:-31062205 | MS.gene92764:intron |
| ACTTTAGCACCCCATTTAGC+TGG | 0.437464 | 7.4:+31061190 | None:intergenic |
| AACCTTCTTGCTAATGGCCT+TGG | 0.440891 | 7.4:-31062825 | MS.gene92764:CDS |
| AAACCAACCAAACATGCAAA+AGG | 0.441393 | 7.4:+31062907 | None:intergenic |
| AGCTAAATGGGGTGCTAAAG+TGG | 0.444772 | 7.4:-31061188 | MS.gene92764:CDS |
| CTTGGAATTTATTCAGATGC+AGG | 0.449478 | 7.4:-31061971 | MS.gene92764:CDS |
| TCTTCTAGAACTCATGCAAC+TGG | 0.450734 | 7.4:+31059573 | None:intergenic |
| GTGCTAAAGTGGGAAATAGT+TGG | 0.469009 | 7.4:-31061177 | MS.gene92764:CDS |
| TACCAAGGCCATTAGCAAGA+AGG | 0.473441 | 7.4:+31062823 | None:intergenic |
| TGTTGCTGCAGATGATTGTT+GGG | 0.474807 | 7.4:-31062204 | MS.gene92764:intron |
| TTATGTACCTATGTTGACAT+AGG | 0.479023 | 7.4:+31062330 | None:intergenic |
| CATAGCAAGGGTCTTAAGCT+TGG | 0.485258 | 7.4:-31061989 | MS.gene92764:CDS |
| TCACATAGCGAAAAGAAGAT+TGG | 0.486370 | 7.4:+31061474 | None:intergenic |
| CAGTTTGTGGGCTATTTCAA+AGG | 0.488558 | 7.4:-31060743 | MS.gene92764:intron |
| ATGCTTGAGGTTGGAAATGG+AGG | 0.493055 | 7.4:-31060796 | MS.gene92764:CDS |
| GATATGCTTGAGGTTGGAAA+TGG | 0.493237 | 7.4:-31060799 | MS.gene92764:CDS |
| ACATGTAGCAAACAAATGCC+TGG | 0.496161 | 7.4:-31061860 | MS.gene92764:CDS |
| GGAAATAGTTGGAGAACTAC+TGG | 0.506903 | 7.4:-31061166 | MS.gene92764:CDS |
| TATGACTCGGGCTTTAATGA+AGG | 0.508006 | 7.4:-31061505 | MS.gene92764:CDS |
| TGCAGATTATGTTCATAGCA+AGG | 0.510065 | 7.4:-31062002 | MS.gene92764:CDS |
| TCAACTGGTCTATCTAAGCT+TGG | 0.514706 | 7.4:-31062358 | MS.gene92764:CDS |
| CTTACACGCATGTGATTCTA+CGG | 0.515503 | 7.4:+31059611 | None:intergenic |
| AAACAAATGCCTGGTTCACT+AGG | 0.520373 | 7.4:-31061851 | MS.gene92764:CDS |
| CTTGGTAAAACTCCTCCTAT+GGG | 0.521865 | 7.4:-31062807 | MS.gene92764:CDS |
| GCTGTTACATTAATCTTCTG+AGG | 0.525815 | 7.4:+31059904 | None:intergenic |
| AGCTTGCAAGACCTGGTGGT+TGG | 0.526013 | 7.4:-31060942 | MS.gene92764:CDS |
| AAATGTGACTAAAGAGACCT+TGG | 0.527242 | 7.4:-31060432 | MS.gene92764:CDS |
| GATTGGATTTGAGATGGTGG+TGG | 0.534307 | 7.4:-31062940 | MS.gene92764:CDS |
| TAGTAAGATTGGATTTGAGA+TGG | 0.535104 | 7.4:-31062946 | MS.gene92764:CDS |
| GATCCTGATATGCTTGAGGT+TGG | 0.538064 | 7.4:-31060805 | MS.gene92764:CDS |
| GCAAGACCTGGTGGTTGGAA+TGG | 0.539179 | 7.4:-31060937 | MS.gene92764:intron |
| TTTGTTGGATAGATATGGGC+AGG | 0.543001 | 7.4:-31059973 | MS.gene92764:intron |
| AGATCACAGCCTAGAAGAAG+AGG | 0.543289 | 7.4:+31060458 | None:intergenic |
| GCAGATTATGTTCATAGCAA+GGG | 0.548297 | 7.4:-31062001 | MS.gene92764:CDS |
| TAGATAGACCAGTTGAAACA+AGG | 0.549426 | 7.4:+31062365 | None:intergenic |
| TATGCTGAGCTTGCAAGACC+TGG | 0.553013 | 7.4:-31060949 | MS.gene92764:CDS |
| TTGGAATTTATTCAGATGCA+GGG | 0.559186 | 7.4:-31061970 | MS.gene92764:intron |
| GCTACCCTATATCCTGAAAG+AGG | 0.563682 | 7.4:+31059949 | None:intergenic |
| AACCAACCAAACATGCAAAA+GGG | 0.563850 | 7.4:+31062908 | None:intergenic |
| AACTCATGACCTAGTGAACC+AGG | 0.568821 | 7.4:+31061842 | None:intergenic |
| TAGGTATCCTGTTATGACTC+GGG | 0.570771 | 7.4:-31061517 | MS.gene92764:CDS |
| TTGACTACCTACCTCACAGT+GGG | 0.572699 | 7.4:+31061651 | None:intergenic |
| ATAGGTATCCTGTTATGACT+CGG | 0.578098 | 7.4:-31061518 | MS.gene92764:intron |
| ACTCGGGCTTTAATGAAGGC+AGG | 0.580189 | 7.4:-31061501 | MS.gene92764:CDS |
| GGATACACCTATGTCAACAT+AGG | 0.584008 | 7.4:-31062337 | MS.gene92764:intron |
| TAAGATTGGATTTGAGATGG+TGG | 0.588965 | 7.4:-31062943 | MS.gene92764:CDS |
| TTTATGCAGTATGATTTCAA+GGG | 0.593167 | 7.4:-31060989 | MS.gene92764:intron |
| CTTATTAGAGACTATCTCCA+AGG | 0.595408 | 7.4:+31060415 | None:intergenic |
| GCTAAATGGGGTGCTAAAGT+GGG | 0.605638 | 7.4:-31061187 | MS.gene92764:CDS |
| AGATAACATCAACAACTATG+AGG | 0.607792 | 7.4:-31062865 | MS.gene92764:CDS |
| TACAATGAATTACCTCCCAA+AGG | 0.608422 | 7.4:+31059830 | None:intergenic |
| AACAGATCCTGATATGCTTG+AGG | 0.609688 | 7.4:-31060809 | MS.gene92764:intron |
| TTCTAACCATTCCAACCACC+AGG | 0.610518 | 7.4:+31060931 | None:intergenic |
| TATCACACGATAGATTCGCT+TGG | 0.610905 | 7.4:-31060290 | MS.gene92764:intron |
| GCAAGAGCTTTGATGCCAGA+AGG | 0.611987 | 7.4:+31062022 | None:intergenic |
| GCTGAGCTTGCAAGACCTGG+TGG | 0.617565 | 7.4:-31060946 | MS.gene92764:CDS |
| ACATAACCGATAATTGGGAA+AGG | 0.622539 | 7.4:-31061141 | MS.gene92764:intron |
| ACAGCTAATTGGGATGACAT+TGG | 0.629945 | 7.4:-31059886 | MS.gene92764:CDS |
| TGCTTGAGGTTGGAAATGGA+GGG | 0.639239 | 7.4:-31060795 | MS.gene92764:CDS |
| GAAGTTATTACAGTTAACCA+AGG | 0.643404 | 7.4:-31060392 | MS.gene92764:intron |
| AGATAGACCAGTTGAAACAA+GGG | 0.645698 | 7.4:+31062366 | None:intergenic |
| CAGGATGGAAGGTGATGCTG+AGG | 0.646471 | 7.4:-31060249 | MS.gene92764:intron |
| TCAGTGACATACCCCATAGG+AGG | 0.646596 | 7.4:+31062795 | None:intergenic |
| AATTCAGTGACATACCCCAT+AGG | 0.669127 | 7.4:+31062792 | None:intergenic |
| TAACATCAACAACTATGAGG+AGG | 0.682908 | 7.4:-31062862 | MS.gene92764:CDS |
| TTGGTAAAACTCCTCCTATG+GGG | 0.687837 | 7.4:-31062806 | MS.gene92764:intron |
| GATATGCATCCAGCTAAATG+GGG | 0.703250 | 7.4:-31061199 | MS.gene92764:CDS |
| TCAAGCAAGAGACCTTTGGG+AGG | 0.722019 | 7.4:-31059842 | MS.gene92764:intron |
| TTTGACTACCTACCTCACAG+TGG | 0.727048 | 7.4:+31061650 | None:intergenic |
| ATGAATCAAAGCCCACTGTG+AGG | 0.728024 | 7.4:-31061662 | MS.gene92764:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAATAAATAAATACAAA+GGG | + | chr7.4:31060613-31060632 | None:intergenic | 10.0% |
| !! | TGAAAAATAAATAAATACAA+AGG | + | chr7.4:31060614-31060633 | None:intergenic | 10.0% |
| !! | TTTAATGAATTCAAAATAAA+AGG | - | chr7.4:31062439-31062458 | MS.gene92764:intron | 10.0% |
| !!! | TCATTTTTTCAAATTATTAT+TGG | - | chr7.4:31061213-31061232 | MS.gene92764:intron | 10.0% |
| !!! | ATAACATTTTTTTGTTATAC+AGG | - | chr7.4:31059925-31059944 | MS.gene92764:CDS | 15.0% |
| !!! | CAATTAATTTTAAATGATCT+CGG | - | chr7.4:31061942-31061961 | MS.gene92764:intron | 15.0% |
| !!! | TCAATTTTTTTACTTTGTAA+GGG | - | chr7.4:31060269-31060288 | MS.gene92764:CDS | 15.0% |
| !!! | TTCAATTTTTTTACTTTGTA+AGG | - | chr7.4:31060268-31060287 | MS.gene92764:CDS | 15.0% |
| !! | GTTAATTACTTGTATAGAAT+TGG | - | chr7.4:31062353-31062372 | MS.gene92764:CDS | 20.0% |
| !! | TAGTAATACTTTAATTAGCA+AGG | - | chr7.4:31059807-31059826 | MS.gene92764:intron | 20.0% |
| !!! | AAACATGATTTTGAAAAACA+TGG | - | chr7.4:31060986-31061005 | MS.gene92764:intron | 20.0% |
| ! | AAAAAATCAACATTTCCTTC+TGG | - | chr7.4:31060501-31060520 | MS.gene92764:intron | 25.0% |
| ! | AAACATAGTGCCAAATTATT+AGG | + | chr7.4:31062516-31062535 | None:intergenic | 25.0% |
| ! | AATCCAACAAAATTAAGAGA+AGG | + | chr7.4:31059772-31059791 | None:intergenic | 25.0% |
| ! | AATGATTGTGCCTAATAATT+TGG | - | chr7.4:31062503-31062522 | MS.gene92764:intron | 25.0% |
| ! | AGATTAATGTAACAGCTAAT+TGG | - | chr7.4:31062641-31062660 | MS.gene92764:intron | 25.0% |
| ! | ATTGTTTGATCTCAAATCAA+TGG | + | chr7.4:31061910-31061929 | None:intergenic | 25.0% |
| ! | GATTAATGTAACAGCTAATT+GGG | - | chr7.4:31062642-31062661 | MS.gene92764:intron | 25.0% |
| ! | TAATCAAGCAAAATAAGCAT+TGG | + | chr7.4:31060816-31060835 | None:intergenic | 25.0% |
| ! | TACATGCTTTCACATAAATA+AGG | + | chr7.4:31061848-31061867 | None:intergenic | 25.0% |
| ! | TATAAGATGCAGTTCTATTA+GGG | + | chr7.4:31060959-31060978 | None:intergenic | 25.0% |
| ! | TATGTTTAATTGCACTTTGT+TGG | - | chr7.4:31062810-31062829 | MS.gene92764:CDS | 25.0% |
| ! | TCTTAAGATTTATGATACTG+AGG | - | chr7.4:31059896-31059915 | MS.gene92764:CDS | 25.0% |
| ! | TTATAAGATGCAGTTCTATT+AGG | + | chr7.4:31060960-31060979 | None:intergenic | 25.0% |
| ! | TTCACATAAATAAGGATGTT+TGG | + | chr7.4:31061840-31061859 | None:intergenic | 25.0% |
| ! | TTGGTTACATAGATATTACT+AGG | + | chr7.4:31060797-31060816 | None:intergenic | 25.0% |
| ! | TTTATGCAGTATGATTTCAA+GGG | - | chr7.4:31061549-31061568 | MS.gene92764:intron | 25.0% |
| !! | AAACTTTCTTTGTTTGTTAG+GGG | - | chr7.4:31061315-31061334 | MS.gene92764:intron | 25.0% |
| !! | ATTCCTTCTCTTAATTTTGT+TGG | - | chr7.4:31059766-31059785 | MS.gene92764:intron | 25.0% |
| !! | ATTTTATTAGCTAGTAGCTA+AGG | + | chr7.4:31061521-31061540 | None:intergenic | 25.0% |
| !! | CAAACTTTCTTTGTTTGTTA+GGG | - | chr7.4:31061314-31061333 | MS.gene92764:intron | 25.0% |
| !! | CCAAATACTGTTATGTTTTA+GGG | - | chr7.4:31060465-31060484 | MS.gene92764:intron | 25.0% |
| !! | TCAAACTTTCTTTGTTTGTT+AGG | - | chr7.4:31061313-31061332 | MS.gene92764:intron | 25.0% |
| !! | TCCAAATACTGTTATGTTTT+AGG | - | chr7.4:31060464-31060483 | MS.gene92764:CDS | 25.0% |
| !! | TGTTTAACAACTTTTTGTGA+AGG | - | chr7.4:31061637-31061656 | MS.gene92764:intron | 25.0% |
| !! | TTCTTATATGCATGTTTTGT+TGG | - | chr7.4:31062550-31062569 | MS.gene92764:intron | 25.0% |
| !! | TTTTATGCAGTATGATTTCA+AGG | - | chr7.4:31061548-31061567 | MS.gene92764:intron | 25.0% |
| !! | TTTTTACCTTTCCCAATTAT+CGG | + | chr7.4:31061406-31061425 | None:intergenic | 25.0% |
| !!! | ACATTTTGTGAATAAGTTGA+GGG | - | chr7.4:31062901-31062920 | MS.gene92764:CDS | 25.0% |
| !!! | ACATTTTTTTGTTATACAGG+TGG | - | chr7.4:31059928-31059947 | MS.gene92764:CDS | 25.0% |
| !!! | ATGTTTTGTTGGATAGATAT+GGG | - | chr7.4:31062561-31062580 | MS.gene92764:CDS | 25.0% |
| AAATGAAGCACAGTACAATA+CGG | + | chr7.4:31062025-31062044 | None:intergenic | 30.0% | |
| ACATGTAAAATACCTGTGAA+AGG | + | chr7.4:31060664-31060683 | None:intergenic | 30.0% | |
| ACGAAATCGTATGTTGTATT+CGG | + | chr7.4:31062326-31062345 | None:intergenic | 30.0% | |
| AGATAACATCAACAACTATG+AGG | - | chr7.4:31059673-31059692 | MS.gene92764:intron | 30.0% | |
| ATGAGAAAATACCAGTTTCT+CGG | + | chr7.4:31059998-31060017 | None:intergenic | 30.0% | |
| CAAAGAAAGTTTGATTAGAG+AGG | + | chr7.4:31061307-31061326 | None:intergenic | 30.0% | |
| CCCTAAAACATAACAGTATT+TGG | + | chr7.4:31060468-31060487 | None:intergenic | 30.0% | |
| CTTATTATCGCGATTAAGTT+CGG | + | chr7.4:31060360-31060379 | None:intergenic | 30.0% | |
| GAAGTTATTACAGTTAACCA+AGG | - | chr7.4:31062146-31062165 | MS.gene92764:intron | 30.0% | |
| TAGTAAGATTGGATTTGAGA+TGG | - | chr7.4:31059592-31059611 | MS.gene92764:CDS | 30.0% | |
| TTATGTACCTATGTTGACAT+AGG | + | chr7.4:31060211-31060230 | None:intergenic | 30.0% | |
| TTGGAATTTATTCAGATGCA+GGG | - | chr7.4:31060568-31060587 | MS.gene92764:intron | 30.0% | |
| ! | AAAAACCATGCACTCAATTT+TGG | - | chr7.4:31061421-31061440 | MS.gene92764:intron | 30.0% |
| ! | ATGTGAAAGCATGTATTGTA+CGG | - | chr7.4:31061853-31061872 | MS.gene92764:CDS | 30.0% |
| ! | CACATTTTGTGAATAAGTTG+AGG | - | chr7.4:31062900-31062919 | MS.gene92764:CDS | 30.0% |
| !! | CATGTTTTGTTGGATAGATA+TGG | - | chr7.4:31062560-31062579 | MS.gene92764:CDS | 30.0% |
| !! | TAGAGAGGAGTACTTAAAAT+TGG | + | chr7.4:31061292-31061311 | None:intergenic | 30.0% |
| !!! | GCTTATTTTGCTTGATTACA+GGG | - | chr7.4:31060818-31060837 | MS.gene92764:intron | 30.0% |
| !!! | TGCTTATTTTGCTTGATTAC+AGG | - | chr7.4:31060817-31060836 | MS.gene92764:intron | 30.0% |
| !!! | TGTTATGTTTTAGGGTAATC+TGG | - | chr7.4:31060473-31060492 | MS.gene92764:intron | 30.0% |
| AAACCAACCAAACATGCAAA+AGG | + | chr7.4:31059634-31059653 | None:intergenic | 35.0% | |
| AAATGTGACTAAAGAGACCT+TGG | - | chr7.4:31062106-31062125 | MS.gene92764:intron | 35.0% | |
| AACATGGCCTTCTTATGTAT+AGG | - | chr7.4:31061002-31061021 | MS.gene92764:intron | 35.0% | |
| AACCAACCAAACATGCAAAA+GGG | + | chr7.4:31059633-31059652 | None:intergenic | 35.0% | |
| AATTGGATGCTATAAAGCAC+CGG | + | chr7.4:31061275-31061294 | None:intergenic | 35.0% | |
| ACATAACCGATAATTGGGAA+AGG | - | chr7.4:31061397-31061416 | MS.gene92764:intron | 35.0% | |
| AGAAGAAACCTTCTTGCTAA+TGG | - | chr7.4:31059707-31059726 | MS.gene92764:intron | 35.0% | |
| AGATAGACCAGTTGAAACAA+GGG | + | chr7.4:31060175-31060194 | None:intergenic | 35.0% | |
| AGATATGCATCCAGCTAAAT+GGG | - | chr7.4:31061338-31061357 | MS.gene92764:intron | 35.0% | |
| ATAGGTATCCTGTTATGACT+CGG | - | chr7.4:31061020-31061039 | MS.gene92764:intron | 35.0% | |
| ATATCGTTCACTTCAGTTTG+TGG | - | chr7.4:31061782-31061801 | MS.gene92764:intron | 35.0% | |
| ATCTACGTAGCACATATTGA+AGG | - | chr7.4:31061126-31061145 | MS.gene92764:intron | 35.0% | |
| ATTGGTGCATATGTCAGTAT+CGG | - | chr7.4:31061231-31061250 | MS.gene92764:intron | 35.0% | |
| CAGGATACCTATACATAAGA+AGG | + | chr7.4:31061012-31061031 | None:intergenic | 35.0% | |
| CGAACTTAATCGCGATAATA+AGG | - | chr7.4:31060358-31060377 | MS.gene92764:intron | 35.0% | |
| CTTATTAGAGACTATCTCCA+AGG | + | chr7.4:31062126-31062145 | None:intergenic | 35.0% | |
| CTTGGAATTTATTCAGATGC+AGG | - | chr7.4:31060567-31060586 | MS.gene92764:intron | 35.0% | |
| CTTGGAGATAGTCTCTAATA+AGG | - | chr7.4:31062124-31062143 | MS.gene92764:intron | 35.0% | |
| GAAAAAATGATCCGAGAAAC+TGG | - | chr7.4:31059984-31060003 | MS.gene92764:intron | 35.0% | |
| GCAGATTATGTTCATAGCAA+GGG | - | chr7.4:31060537-31060556 | MS.gene92764:intron | 35.0% | |
| GCTGTTACATTAATCTTCTG+AGG | + | chr7.4:31062637-31062656 | None:intergenic | 35.0% | |
| GGCATACAATCTTAATCCAA+CGG | - | chr7.4:31062460-31062479 | MS.gene92764:intron | 35.0% | |
| TAACATCAACAACTATGAGG+AGG | - | chr7.4:31059676-31059695 | MS.gene92764:intron | 35.0% | |
| TACAATGAATTACCTCCCAA+AGG | + | chr7.4:31062711-31062730 | None:intergenic | 35.0% | |
| TACTGCTGAGGTTATAAGTA+AGG | - | chr7.4:31062834-31062853 | MS.gene92764:CDS | 35.0% | |
| TAGATAGACCAGTTGAAACA+AGG | + | chr7.4:31060176-31060195 | None:intergenic | 35.0% | |
| TATCGTTCACTTCAGTTTGT+GGG | - | chr7.4:31061783-31061802 | MS.gene92764:intron | 35.0% | |
| TCACATAGCGAAAAGAAGAT+TGG | + | chr7.4:31061067-31061086 | None:intergenic | 35.0% | |
| TCTGCAGCAACAAAAAATTG+TGG | + | chr7.4:31060326-31060345 | None:intergenic | 35.0% | |
| TCTTTATTCTGACCTTTCAC+AGG | - | chr7.4:31060649-31060668 | MS.gene92764:intron | 35.0% | |
| TGACAAATTATGTGTCACCT+TGG | + | chr7.4:31062166-31062185 | None:intergenic | 35.0% | |
| TGCAGATTATGTTCATAGCA+AGG | - | chr7.4:31060536-31060555 | MS.gene92764:intron | 35.0% | |
| TGGTGACATAACCGATAATT+GGG | - | chr7.4:31061392-31061411 | MS.gene92764:intron | 35.0% | |
| TGTTATACAGGTGGAATAGT+TGG | - | chr7.4:31059937-31059956 | MS.gene92764:CDS | 35.0% | |
| ! | ATGCCAAAACTTTTGCATCA+TGG | - | chr7.4:31060724-31060743 | MS.gene92764:intron | 35.0% |
| ! | ATTCTAAAAGCACACTGTCT+CGG | + | chr7.4:31062486-31062505 | None:intergenic | 35.0% |
| ! | CTTGCTTGAACAACAGTTTT+TGG | + | chr7.4:31062685-31062704 | None:intergenic | 35.0% |
| ! | TAAGATTGGATTTGAGATGG+TGG | - | chr7.4:31059595-31059614 | MS.gene92764:CDS | 35.0% |
| ! | TACCCATGATGCAAAAGTTT+TGG | + | chr7.4:31060730-31060749 | None:intergenic | 35.0% |
| ! | TCTTCTTTTCGCTATGTGAA+TGG | - | chr7.4:31061068-31061087 | MS.gene92764:intron | 35.0% |
| ! | TGCCAAAACTTTTGCATCAT+GGG | - | chr7.4:31060725-31060744 | MS.gene92764:intron | 35.0% |
| ! | TTTTGTGAAGGATATCGAGT+TGG | - | chr7.4:31061649-31061668 | MS.gene92764:intron | 35.0% |
| !! | ATGCAAAAGTTTTGGCATCT+TGG | + | chr7.4:31060722-31060741 | None:intergenic | 35.0% |
| !! | GCTGTTGTGTTGCTTAATAA+AGG | - | chr7.4:31062610-31062629 | MS.gene92764:intron | 35.0% |
| !! | TACTGTGCTTCATTTTTCAC+TGG | - | chr7.4:31062030-31062049 | MS.gene92764:CDS | 35.0% |
| !!! | ATGTTTTAGGGTAATCTGGT+GGG | - | chr7.4:31060477-31060496 | MS.gene92764:intron | 35.0% |
| !!! | TATGTTTTAGGGTAATCTGG+TGG | - | chr7.4:31060476-31060495 | MS.gene92764:intron | 35.0% |
| !!! | TTCATTTTTCACTGGTTCAC+CGG | - | chr7.4:31062038-31062057 | MS.gene92764:CDS | 35.0% |
| AAACAAATGCCTGGTTCACT+AGG | - | chr7.4:31060687-31060706 | MS.gene92764:intron | 40.0% | |
| AACAGATCCTGATATGCTTG+AGG | - | chr7.4:31061729-31061748 | MS.gene92764:intron | 40.0% | |
| AATTCAGTGACATACCCCAT+AGG | + | chr7.4:31059749-31059768 | None:intergenic | 40.0% | |
| ACAAGCTAAAAAGGTCAGGA+TGG | - | chr7.4:31062274-31062293 | MS.gene92764:intron | 40.0% | |
| ACAGCTAATTGGGATGACAT+TGG | - | chr7.4:31062652-31062671 | MS.gene92764:intron | 40.0% | |
| ACATGTAGCAAACAAATGCC+TGG | - | chr7.4:31060678-31060697 | MS.gene92764:intron | 40.0% | |
| ACCAACCAAAATTGAGTGCA+TGG | + | chr7.4:31061429-31061448 | None:intergenic | 40.0% | |
| AGCTAGTAGCTAAGGATAGT+AGG | + | chr7.4:31061513-31061532 | None:intergenic | 40.0% | |
| AGGTCCTCTTTCAGGATATA+GGG | - | chr7.4:31062585-31062604 | MS.gene92764:CDS | 40.0% | |
| ATTAAAGCCCGAGTCATAAC+AGG | + | chr7.4:31061031-31061050 | None:intergenic | 40.0% | |
| CTGGTGACATAACCGATAAT+TGG | - | chr7.4:31061391-31061410 | MS.gene92764:intron | 40.0% | |
| CTTACACGCATGTGATTCTA+CGG | + | chr7.4:31062930-31062949 | None:intergenic | 40.0% | |
| CTTGGTAAAACTCCTCCTAT+GGG | - | chr7.4:31059731-31059750 | MS.gene92764:intron | 40.0% | |
| GAGATATGCATCCAGCTAAA+TGG | - | chr7.4:31061337-31061356 | MS.gene92764:intron | 40.0% | |
| GATATGCATCCAGCTAAATG+GGG | - | chr7.4:31061339-31061358 | MS.gene92764:intron | 40.0% | |
| GATATGCTTGAGGTTGGAAA+TGG | - | chr7.4:31061739-31061758 | MS.gene92764:intron | 40.0% | |
| GATCTGATGTACATATGTGC+CGG | - | chr7.4:31061253-31061272 | MS.gene92764:intron | 40.0% | |
| GGAAATAGTTGGAGAACTAC+TGG | - | chr7.4:31061372-31061391 | MS.gene92764:intron | 40.0% | |
| GGATACACCTATGTCAACAT+AGG | - | chr7.4:31060201-31060220 | MS.gene92764:intron | 40.0% | |
| GTGCTAAAGTGGGAAATAGT+TGG | - | chr7.4:31061361-31061380 | MS.gene92764:intron | 40.0% | |
| TAGGTATCCTGTTATGACTC+GGG | - | chr7.4:31061021-31061040 | MS.gene92764:intron | 40.0% | |
| TATCACACGATAGATTCGCT+TGG | - | chr7.4:31062248-31062267 | MS.gene92764:intron | 40.0% | |
| TGAATACTGCCAGTGAATTC+AGG | + | chr7.4:31061880-31061899 | None:intergenic | 40.0% | |
| TGTTCAAGCAAGAGACCTTT+GGG | - | chr7.4:31062693-31062712 | MS.gene92764:intron | 40.0% | |
| TGTTGCTGCAGATGATTGTT+GGG | - | chr7.4:31060334-31060353 | MS.gene92764:intron | 40.0% | |
| TTGGTAAAACTCCTCCTATG+GGG | - | chr7.4:31059732-31059751 | MS.gene92764:intron | 40.0% | |
| TTGTTCAAGCAAGAGACCTT+TGG | - | chr7.4:31062692-31062711 | MS.gene92764:intron | 40.0% | |
| TTGTTGCTGCAGATGATTGT+TGG | - | chr7.4:31060333-31060352 | MS.gene92764:intron | 40.0% | |
| TTTCCAACCTCAAGCATATC+AGG | + | chr7.4:31061739-31061758 | None:intergenic | 40.0% | |
| TTTGTTGGATAGATATGGGC+AGG | - | chr7.4:31062565-31062584 | MS.gene92764:CDS | 40.0% | |
| ! | CAGTTTGTGGGCTATTTCAA+AGG | - | chr7.4:31061795-31061814 | MS.gene92764:intron | 40.0% |
| ! | GCACATATTGAAGGTGTATC+CGG | - | chr7.4:31061135-31061154 | MS.gene92764:intron | 40.0% |
| ! | TATGACTCGGGCTTTAATGA+AGG | - | chr7.4:31061033-31061052 | MS.gene92764:intron | 40.0% |
| ! | TCAACTGGTCTATCTAAGCT+TGG | - | chr7.4:31060180-31060199 | MS.gene92764:intron | 40.0% |
| !! | ACCATGCACTCAATTTTGGT+TGG | - | chr7.4:31061425-31061444 | MS.gene92764:intron | 40.0% |
| !! | GCTTGAACAACAGTTTTTGG+AGG | + | chr7.4:31062682-31062701 | None:intergenic | 40.0% |
| !!! | ATTTGAGATGGTGGTGGTTT+TGG | - | chr7.4:31059604-31059623 | MS.gene92764:CDS | 40.0% |
| AACCTTCTTGCTAATGGCCT+TGG | - | chr7.4:31059713-31059732 | MS.gene92764:intron | 45.0% | |
| AACTCATGACCTAGTGAACC+AGG | + | chr7.4:31060699-31060718 | None:intergenic | 45.0% | |
| ACTTTAGCACCCCATTTAGC+TGG | + | chr7.4:31061351-31061370 | None:intergenic | 45.0% | |
| AGATCACAGCCTAGAAGAAG+AGG | + | chr7.4:31062083-31062102 | None:intergenic | 45.0% | |
| AGCCTGCAATAAACCTTCAC+CGG | + | chr7.4:31062060-31062079 | None:intergenic | 45.0% | |
| ATGAATCAAAGCCCACTGTG+AGG | - | chr7.4:31060876-31060895 | MS.gene92764:intron | 45.0% | |
| ATGCTTGAGGTTGGAAATGG+AGG | - | chr7.4:31061742-31061761 | MS.gene92764:intron | 45.0% | |
| CACTTTGTTGGATACTGCTG+AGG | - | chr7.4:31062822-31062841 | MS.gene92764:CDS | 45.0% | |
| CAGGTCCTCTTTCAGGATAT+AGG | - | chr7.4:31062584-31062603 | MS.gene92764:CDS | 45.0% | |
| CATAGCAAGGGTCTTAAGCT+TGG | - | chr7.4:31060549-31060568 | MS.gene92764:intron | 45.0% | |
| CCTTGGTAAAACTCCTCCTA+TGG | - | chr7.4:31059730-31059749 | MS.gene92764:intron | 45.0% | |
| GATCCTGATATGCTTGAGGT+TGG | - | chr7.4:31061733-31061752 | MS.gene92764:intron | 45.0% | |
| GCGTACAAGCTAAAAAGGTC+AGG | - | chr7.4:31062270-31062289 | MS.gene92764:intron | 45.0% | |
| GCTAAAAAGGTCAGGATGGA+AGG | - | chr7.4:31062278-31062297 | MS.gene92764:intron | 45.0% | |
| GCTACCCTATATCCTGAAAG+AGG | + | chr7.4:31062592-31062611 | None:intergenic | 45.0% | |
| GCTTGGCGTACAAGCTAAAA+AGG | - | chr7.4:31062265-31062284 | MS.gene92764:intron | 45.0% | |
| TACCAAGGCCATTAGCAAGA+AGG | + | chr7.4:31059718-31059737 | None:intergenic | 45.0% | |
| TATCCGGTATCTGACATGTG+CGG | - | chr7.4:31061151-31061170 | MS.gene92764:CDS | 45.0% | |
| TGCTTGAGGTTGGAAATGGA+GGG | - | chr7.4:31061743-31061762 | MS.gene92764:intron | 45.0% | |
| TGTGACGCAGTTAGAGATCT+GGG | + | chr7.4:31061990-31062009 | None:intergenic | 45.0% | |
| TTCTAACCATTCCAACCACC+AGG | + | chr7.4:31061610-31061629 | None:intergenic | 45.0% | |
| TTGACTACCTACCTCACAGT+GGG | + | chr7.4:31060890-31060909 | None:intergenic | 45.0% | |
| TTGTACGGACCTGAATTCAC+TGG | - | chr7.4:31061868-31061887 | MS.gene92764:CDS | 45.0% | |
| TTTGACTACCTACCTCACAG+TGG | + | chr7.4:31060891-31060910 | None:intergenic | 45.0% | |
| ! | AGCTAAATGGGGTGCTAAAG+TGG | - | chr7.4:31061350-31061369 | MS.gene92764:intron | 45.0% |
| ! | CCATAGGAGGAGTTTTACCA+AGG | + | chr7.4:31059733-31059752 | None:intergenic | 45.0% |
| ! | GACCCTTTTGCATGTTTGGT+TGG | - | chr7.4:31059628-31059647 | MS.gene92764:CDS | 45.0% |
| ! | GATTGGATTTGAGATGGTGG+TGG | - | chr7.4:31059598-31059617 | MS.gene92764:CDS | 45.0% |
| ! | GCTAAATGGGGTGCTAAAGT+GGG | - | chr7.4:31061351-31061370 | MS.gene92764:intron | 45.0% |
| ! | TGGTGACCCTTTTGCATGTT+TGG | - | chr7.4:31059624-31059643 | MS.gene92764:CDS | 45.0% |
| !! | AAACAAGGGCATCAGCTGTA+AGG | + | chr7.4:31060161-31060180 | None:intergenic | 45.0% |
| !! | CTCGGTTGCTGATTTGCAAT+TGG | - | chr7.4:31061960-31061979 | MS.gene92764:intron | 45.0% |
| ATATGGGCAGGTCCTCTTTC+AGG | - | chr7.4:31062577-31062596 | MS.gene92764:CDS | 50.0% | |
| ATCAAAGCCCACTGTGAGGT+AGG | - | chr7.4:31060880-31060899 | MS.gene92764:intron | 50.0% | |
| CACCGGTGAAGGTTTATTGC+AGG | - | chr7.4:31062055-31062074 | MS.gene92764:CDS | 50.0% | |
| CTGTGACGCAGTTAGAGATC+TGG | + | chr7.4:31061991-31062010 | None:intergenic | 50.0% | |
| TATGCTGAGCTTGCAAGACC+TGG | - | chr7.4:31061589-31061608 | MS.gene92764:intron | 50.0% | |
| TCAAGCAAGAGACCTTTGGG+AGG | - | chr7.4:31062696-31062715 | MS.gene92764:intron | 50.0% | |
| TCAGTGACATACCCCATAGG+AGG | + | chr7.4:31059746-31059765 | None:intergenic | 50.0% | |
| TTGCAGGCTCCTCTTCTTCT+AGG | - | chr7.4:31062071-31062090 | MS.gene92764:intron | 50.0% | |
| ! | ACTCGGGCTTTAATGAAGGC+AGG | - | chr7.4:31061037-31061056 | MS.gene92764:intron | 50.0% |
| ! | GCAAGAGCTTTGATGCCAGA+AGG | + | chr7.4:31060519-31060538 | None:intergenic | 50.0% |
| ! | GCTGATGCCCTTGTTTCAAC+TGG | - | chr7.4:31060165-31060184 | MS.gene92764:intron | 50.0% |
| !! | TTTCACTGGTTCACCGGTGA+AGG | - | chr7.4:31062044-31062063 | MS.gene92764:CDS | 50.0% |
| AGCTTGCAAGACCTGGTGGT+TGG | - | chr7.4:31061596-31061615 | MS.gene92764:intron | 55.0% | |
| CAGCCGCACATGTCAGATAC+CGG | + | chr7.4:31061157-31061176 | None:intergenic | 55.0% | |
| CAGGATGGAAGGTGATGCTG+AGG | - | chr7.4:31062289-31062308 | MS.gene92764:intron | 55.0% | |
| GCAAGACCTGGTGGTTGGAA+TGG | - | chr7.4:31061601-31061620 | MS.gene92764:intron | 55.0% | |
| AAGCACACTGTCTCGGCCGT+TGG | + | chr7.4:31062479-31062498 | None:intergenic | 60.0% | |
| GCTGAGCTTGCAAGACCTGG+TGG | - | chr7.4:31061592-31061611 | MS.gene92764:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 31059584 | 31062976 | 31059584 | ID=MS.gene92764 |
| chr7.4 | mRNA | 31059584 | 31062976 | 31059584 | ID=MS.gene92764.t1;Parent=MS.gene92764 |
| chr7.4 | exon | 31062807 | 31062976 | 31062807 | ID=MS.gene92764.t1.exon1;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31062807 | 31062976 | 31062807 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31062555 | 31062613 | 31062555 | ID=MS.gene92764.t1.exon2;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31062555 | 31062613 | 31062555 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31062338 | 31062394 | 31062338 | ID=MS.gene92764.t1.exon3;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31062338 | 31062394 | 31062338 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31062181 | 31062215 | 31062181 | ID=MS.gene92764.t1.exon4;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31062181 | 31062215 | 31062181 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31061971 | 31062074 | 31061971 | ID=MS.gene92764.t1.exon5;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31061971 | 31062074 | 31061971 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31061814 | 31061889 | 31061814 | ID=MS.gene92764.t1.exon6;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31061814 | 31061889 | 31061814 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31061663 | 31061721 | 31061663 | ID=MS.gene92764.t1.exon7;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31061663 | 31061721 | 31061663 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31061471 | 31061536 | 31061471 | ID=MS.gene92764.t1.exon8;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31061471 | 31061536 | 31061471 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31061142 | 31061225 | 31061142 | ID=MS.gene92764.t1.exon9;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31061142 | 31061225 | 31061142 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31060938 | 31061002 | 31060938 | ID=MS.gene92764.t1.exon10;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31060938 | 31061002 | 31060938 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31060744 | 31060826 | 31060744 | ID=MS.gene92764.t1.exon11;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31060744 | 31060826 | 31060744 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31060393 | 31060483 | 31060393 | ID=MS.gene92764.t1.exon12;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31060393 | 31060483 | 31060393 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31060250 | 31060299 | 31060250 | ID=MS.gene92764.t1.exon13;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31060250 | 31060299 | 31060250 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31059843 | 31059983 | 31059843 | ID=MS.gene92764.t1.exon14;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31059843 | 31059983 | 31059843 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| chr7.4 | exon | 31059584 | 31059676 | 31059584 | ID=MS.gene92764.t1.exon15;Parent=MS.gene92764.t1 |
| chr7.4 | CDS | 31059584 | 31059676 | 31059584 | ID=cds.MS.gene92764.t1;Parent=MS.gene92764.t1 |
| Gene Sequence |
| Protein sequence |
