Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049391.t1 | XP_013461524.1 | 97.5 | 362 | 9 | 0 | 1 | 362 | 71 | 432 | 8.10E-190 | 672.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049391.t1 | Q8VXZ7 | 73.7 | 361 | 95 | 0 | 1 | 361 | 75 | 435 | 3.6e-154 | 545.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049391.t1 | A0A072V0K8 | 97.5 | 362 | 9 | 0 | 1 | 362 | 71 | 432 | 5.9e-190 | 672.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049391 | MS.gene059347 | 0.853628 | 2.11E-61 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049391.t1 | MTR_3g094160 | 97.514 | 362 | 9 | 0 | 1 | 362 | 71 | 432 | 0.0 | 737 |
| MS.gene049391.t1 | MTR_1g077520 | 63.408 | 358 | 126 | 3 | 1 | 357 | 56 | 409 | 4.08e-175 | 493 |
| MS.gene049391.t1 | MTR_1g077480 | 63.788 | 359 | 119 | 4 | 1 | 355 | 60 | 411 | 8.70e-172 | 484 |
| MS.gene049391.t1 | MTR_6g069140 | 63.889 | 360 | 119 | 4 | 1 | 356 | 68 | 420 | 1.09e-170 | 482 |
| MS.gene049391.t1 | MTR_6g086625 | 62.953 | 359 | 122 | 4 | 1 | 355 | 54 | 405 | 1.83e-170 | 481 |
| MS.gene049391.t1 | MTR_6g086575 | 62.640 | 356 | 128 | 3 | 1 | 355 | 53 | 404 | 5.17e-170 | 480 |
| MS.gene049391.t1 | MTR_7g073650 | 63.025 | 357 | 127 | 3 | 1 | 355 | 53 | 406 | 3.13e-164 | 465 |
| MS.gene049391.t1 | MTR_7g073640 | 62.465 | 357 | 129 | 3 | 1 | 355 | 54 | 407 | 8.99e-163 | 462 |
| MS.gene049391.t1 | MTR_1g077520 | 69.118 | 272 | 83 | 1 | 1 | 271 | 56 | 327 | 3.00e-147 | 420 |
| MS.gene049391.t1 | MTR_1g078410 | 50.303 | 165 | 59 | 4 | 16 | 176 | 39 | 184 | 2.26e-42 | 146 |
| MS.gene049391.t1 | MTR_0279s0030 | 53.175 | 126 | 55 | 2 | 231 | 355 | 101 | 223 | 1.65e-38 | 137 |
| MS.gene049391.t1 | MTR_0279s0030 | 53.175 | 126 | 55 | 2 | 231 | 355 | 185 | 307 | 1.73e-37 | 137 |
| MS.gene049391.t1 | MTR_0279s0030 | 53.175 | 126 | 55 | 2 | 231 | 355 | 250 | 372 | 1.43e-36 | 136 |
| MS.gene049391.t1 | MTR_3g094180 | 87.879 | 66 | 8 | 0 | 261 | 326 | 4 | 69 | 7.32e-33 | 118 |
| MS.gene049391.t1 | MTR_8g089745 | 25.648 | 347 | 170 | 12 | 2 | 262 | 41 | 385 | 6.99e-17 | 82.0 |
| MS.gene049391.t1 | MTR_8g089745 | 25.648 | 347 | 170 | 12 | 2 | 262 | 41 | 385 | 7.57e-17 | 82.4 |
| MS.gene049391.t1 | MTR_8g089735 | 23.011 | 465 | 242 | 17 | 2 | 353 | 41 | 502 | 8.24e-17 | 82.0 |
| MS.gene049391.t1 | MTR_8g089725 | 23.011 | 465 | 242 | 17 | 2 | 353 | 41 | 502 | 8.32e-17 | 82.0 |
| MS.gene049391.t1 | MTR_3g086580 | 25.071 | 351 | 166 | 12 | 2 | 259 | 43 | 389 | 9.70e-17 | 82.0 |
| MS.gene049391.t1 | MTR_8g089740 | 26.000 | 350 | 166 | 12 | 2 | 262 | 36 | 381 | 2.56e-16 | 80.9 |
| MS.gene049391.t1 | MTR_2g096530 | 24.638 | 345 | 171 | 10 | 2 | 259 | 43 | 385 | 5.43e-16 | 79.7 |
| MS.gene049391.t1 | MTR_3g086580 | 26.966 | 178 | 103 | 5 | 108 | 259 | 26 | 202 | 4.06e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049391.t1 | AT3G56310 | 78.116 | 361 | 79 | 0 | 1 | 361 | 75 | 435 | 0.0 | 611 |
| MS.gene049391.t1 | AT3G56310 | 74.238 | 361 | 69 | 1 | 1 | 361 | 75 | 411 | 0.0 | 566 |
| MS.gene049391.t1 | AT5G08370 | 64.345 | 359 | 123 | 3 | 1 | 358 | 16 | 370 | 7.74e-172 | 483 |
| MS.gene049391.t1 | AT5G08370 | 64.345 | 359 | 123 | 3 | 1 | 358 | 42 | 396 | 9.33e-172 | 484 |
| MS.gene049391.t1 | AT5G08380 | 62.079 | 356 | 131 | 2 | 1 | 355 | 56 | 408 | 2.17e-165 | 468 |
| MS.gene049391.t1 | AT5G08380 | 68.966 | 261 | 80 | 1 | 1 | 260 | 56 | 316 | 4.68e-135 | 388 |
| MS.gene049391.t1 | AT3G26380 | 24.425 | 348 | 174 | 11 | 2 | 262 | 45 | 390 | 7.33e-18 | 85.1 |
| MS.gene049391.t1 | AT3G26380 | 24.348 | 345 | 172 | 11 | 2 | 259 | 45 | 387 | 1.00e-17 | 85.1 |
Find 99 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGTGACAAGAAATTTAA+AGG | 0.225462 | 3.1:+75316329 | MS.gene049391:CDS |
| TATCAATGAAACGGTTATTA+AGG | 0.252370 | 3.1:+75315644 | MS.gene049391:CDS |
| TTGCAGCATAAGGTAATAAA+TGG | 0.260118 | 3.1:+75319506 | MS.gene049391:intron |
| CAACTTGAACTTTCCTTCCT+TGG | 0.282948 | 3.1:-75318900 | None:intergenic |
| ATCGTTTGGCTGTTGCTCTT+TGG | 0.288869 | 3.1:+75319231 | MS.gene049391:CDS |
| TGCAGATTTATTTGCCTCTT+GGG | 0.323327 | 3.1:+75317057 | MS.gene049391:CDS |
| TACAATGTGCAGACGATTGC+TGG | 0.329309 | 3.1:+75316304 | MS.gene049391:intron |
| ATGCAGATTTATTTGCCTCT+TGG | 0.342982 | 3.1:+75317056 | MS.gene049391:CDS |
| GCTTAAAATTTCGAATGTTT+CGG | 0.347419 | 3.1:-75318671 | None:intergenic |
| GCAGCACTCGGGCTTGAATC+TGG | 0.357456 | 3.1:+75319293 | MS.gene049391:CDS |
| GTTCAAGTTGCTGGAATAGA+TGG | 0.358856 | 3.1:+75318913 | MS.gene049391:CDS |
| TGAAGTGAGCACGGTATTCC+TGG | 0.364079 | 3.1:-75318512 | None:intergenic |
| GTGTTGACGATCCTGCTCTA+TGG | 0.368509 | 3.1:+75318096 | MS.gene049391:CDS |
| GCCAAACGATTTCCTGATAA+AGG | 0.371429 | 3.1:-75319218 | None:intergenic |
| GTCTGGGCAGGTCCTTTATC+AGG | 0.376851 | 3.1:+75319206 | MS.gene049391:CDS |
| GGAAGGAAAGTTCAAGTTGC+TGG | 0.382276 | 3.1:+75318904 | MS.gene049391:CDS |
| ATTGCCAACTTCCAACATAT+CGG | 0.393715 | 3.1:-75318475 | None:intergenic |
| GAAACGGTTATTAAGGAAAC+AGG | 0.397519 | 3.1:+75315651 | MS.gene049391:CDS |
| TCCTTTATCAGGAAATCGTT+TGG | 0.403234 | 3.1:+75319217 | MS.gene049391:CDS |
| ACCGTGCTCACTTCAGCATA+TGG | 0.411756 | 3.1:+75318520 | MS.gene049391:CDS |
| TGGGCTGCATATGCCGGTCC+TGG | 0.417041 | 3.1:+75318351 | MS.gene049391:CDS |
| GATGGAAATGTCTTACGATC+AGG | 0.434606 | 3.1:-75316822 | None:intergenic |
| TCAACTGGATTGGCCAAGTT+GGG | 0.435322 | 3.1:+75316182 | MS.gene049391:CDS |
| GGTTATGTGTACGTCAATAT+AGG | 0.436209 | 3.1:+75316203 | MS.gene049391:CDS |
| TCCCTTCCCATGGACATAAT+CGG | 0.441983 | 3.1:-75316862 | None:intergenic |
| TTGCCAACTTCCAACATATC+GGG | 0.455011 | 3.1:-75318474 | None:intergenic |
| CCGATGACATCAATGATACA+TGG | 0.456542 | 3.1:+75318150 | MS.gene049391:CDS |
| GCTGATGCACTGGTATCAAC+TGG | 0.468770 | 3.1:+75316167 | MS.gene049391:intron |
| CAGGCACAGTTGGTAATAGT+TGG | 0.471145 | 3.1:+75318120 | MS.gene049391:CDS |
| GACCGATGGGCTGCATATGC+CGG | 0.472336 | 3.1:+75318345 | MS.gene049391:CDS |
| GCTCTATGGGCAGGCACAGT+TGG | 0.473297 | 3.1:+75318110 | MS.gene049391:CDS |
| CGTGATGCCCTCAATGAAAC+TGG | 0.473669 | 3.1:+75317956 | MS.gene049391:CDS |
| TTCCGTAAGGGATTTGTGGC+AGG | 0.476633 | 3.1:+75319325 | MS.gene049391:CDS |
| GAAGTCATTGCTGTAAATCA+AGG | 0.478784 | 3.1:+75318700 | MS.gene049391:CDS |
| ATGTTTCCGTAAGGGATTTG+TGG | 0.481338 | 3.1:+75319321 | MS.gene049391:CDS |
| GCAGAGTAAGATGCTGTAGA+TGG | 0.482664 | 3.1:-75319593 | None:intergenic |
| TGTCTCTCTGCAGACTCACT+TGG | 0.485221 | 3.1:+75318874 | MS.gene049391:intron |
| CAATGGTGGCATGACTTACC+AGG | 0.490618 | 3.1:+75318494 | MS.gene049391:CDS |
| TGCATGCAATATCAATGAAA+CGG | 0.491799 | 3.1:+75315635 | MS.gene049391:CDS |
| TTTACGACCAGTTTCATTGA+GGG | 0.492041 | 3.1:-75317963 | None:intergenic |
| TGTTGACGATCCTGCTCTAT+GGG | 0.493096 | 3.1:+75318097 | MS.gene049391:CDS |
| GACGATCCTGCTCTATGGGC+AGG | 0.495630 | 3.1:+75318101 | MS.gene049391:CDS |
| ATCAACTGGATTGGCCAAGT+TGG | 0.496099 | 3.1:+75316181 | MS.gene049391:CDS |
| TGGAATAGATGGTTGTAGTC+AGG | 0.503086 | 3.1:+75318924 | MS.gene049391:CDS |
| GCACTTGCCGATTATGTCCA+TGG | 0.503218 | 3.1:+75316855 | MS.gene049391:CDS |
| CCGTGCTCACTTCAGCATAT+GGG | 0.507268 | 3.1:+75318521 | MS.gene049391:CDS |
| ATGTCTTACGATCAGGGACC+AGG | 0.511454 | 3.1:-75316815 | None:intergenic |
| TATGACAATTGTTACAATCT+CGG | 0.512184 | 3.1:+75317815 | MS.gene049391:CDS |
| TTCGACAGACCCCGATATGT+TGG | 0.518184 | 3.1:+75318464 | MS.gene049391:intron |
| CATATGCCGGTCCTGGAGGA+TGG | 0.519568 | 3.1:+75318358 | MS.gene049391:CDS |
| TTGCTGATCTTAATGACCGA+TGG | 0.521286 | 3.1:+75318331 | MS.gene049391:CDS |
| TACCTGCCACAAATCCCTTA+CGG | 0.521890 | 3.1:-75319327 | None:intergenic |
| CTGGAATTCATGTTTCCGTA+AGG | 0.522101 | 3.1:+75319312 | MS.gene049391:CDS |
| CGTGGAAAATTGATCCTGGT+CGG | 0.524701 | 3.1:-75317024 | None:intergenic |
| ATTTATTTACAGGTCTGGGC+AGG | 0.524714 | 3.1:+75319194 | MS.gene049391:intron |
| GCCGATTATGTCCATGGGAA+GGG | 0.529046 | 3.1:+75316861 | MS.gene049391:CDS |
| TTGTGACTATAACAGCATCA+TGG | 0.531411 | 3.1:+75319270 | MS.gene049391:CDS |
| TATCCTTGCAGCTGATGCAC+TGG | 0.533289 | 3.1:+75316157 | MS.gene049391:intron |
| GCAAGTGCTTTGATTCCTGA+TGG | 0.533880 | 3.1:-75316840 | None:intergenic |
| CTTGGCATATATTCTGATGC+TGG | 0.535596 | 3.1:+75316891 | MS.gene049391:CDS |
| CATGGGAAGGGACTCAAGCT+TGG | 0.538301 | 3.1:+75316873 | MS.gene049391:CDS |
| GGTGTACCATTCCATCCTCC+AGG | 0.542408 | 3.1:-75318369 | None:intergenic |
| ACAGCATCATGGGCAGCACT+CGG | 0.542560 | 3.1:+75319281 | MS.gene049391:CDS |
| GACGTACACATAACCCAACT+TGG | 0.542647 | 3.1:-75316195 | None:intergenic |
| ACCATTCCATCCTCCAGGAC+CGG | 0.542782 | 3.1:-75318364 | None:intergenic |
| GCCGGTCCTGGAGGATGGAA+TGG | 0.543310 | 3.1:+75318363 | MS.gene049391:CDS |
| TGGAATTCATGTTTCCGTAA+GGG | 0.545353 | 3.1:+75319313 | MS.gene049391:CDS |
| GCAGACTCACTTGGAGTCCA+AGG | 0.547998 | 3.1:+75318883 | MS.gene049391:intron |
| GATCGTAAGACATTTCCATC+AGG | 0.548086 | 3.1:+75316825 | MS.gene049391:CDS |
| TGCTGATCTTAATGACCGAT+GGG | 0.548796 | 3.1:+75318332 | MS.gene049391:CDS |
| ACTGTGCCTGCCCATAGAGC+AGG | 0.551108 | 3.1:-75318107 | None:intergenic |
| CAGCATATGGGCTTTAGCAA+AGG | 0.551600 | 3.1:+75318533 | MS.gene049391:CDS |
| GACCCCGATATGTTGGAAGT+TGG | 0.558301 | 3.1:+75318471 | MS.gene049391:intron |
| TGTGACTATAACAGCATCAT+GGG | 0.560594 | 3.1:+75319271 | MS.gene049391:CDS |
| ACATCGCAACCAATCAAAAG+AGG | 0.562580 | 3.1:-75318634 | None:intergenic |
| TTGGCATATATTCTGATGCT+GGG | 0.564745 | 3.1:+75316892 | MS.gene049391:CDS |
| ATGGAAATGTCTTACGATCA+GGG | 0.566931 | 3.1:-75316821 | None:intergenic |
| TTTGGAAGTGTAGGGTGACC+TGG | 0.567490 | 3.1:+75316797 | MS.gene049391:intron |
| CAGCATCATGGGCAGCACTC+GGG | 0.569334 | 3.1:+75319282 | MS.gene049391:CDS |
| CCATGTATCATTGATGTCAT+CGG | 0.571669 | 3.1:-75318150 | None:intergenic |
| TGCCGATTATGTCCATGGGA+AGG | 0.578023 | 3.1:+75316860 | MS.gene049391:CDS |
| TGCACTGGTATCAACTGGAT+TGG | 0.584252 | 3.1:+75316172 | MS.gene049391:CDS |
| GACCGGCATATGCAGCCCAT+CGG | 0.586985 | 3.1:-75318347 | None:intergenic |
| TTTACATGTCAAGTCCGACC+AGG | 0.587998 | 3.1:+75317010 | MS.gene049391:CDS |
| CACTTGCCGATTATGTCCAT+GGG | 0.592383 | 3.1:+75316856 | MS.gene049391:CDS |
| CCCATATGCTGAAGTGAGCA+CGG | 0.599322 | 3.1:-75318521 | None:intergenic |
| TCATTGAGGGCATCACGCAT+AGG | 0.600581 | 3.1:-75317950 | None:intergenic |
| ACTCACTTGGAGTCCAAGGA+AGG | 0.601676 | 3.1:+75318887 | MS.gene049391:CDS |
| TTGAGGGCATCACGCATAGG+TGG | 0.611936 | 3.1:-75317947 | None:intergenic |
| CGATGACATCAATGATACAT+GGG | 0.614007 | 3.1:+75318151 | MS.gene049391:CDS |
| ATGTTGGAAGTTGGCAATGG+TGG | 0.621869 | 3.1:+75318480 | MS.gene049391:CDS |
| TGTCGTGTAGATGGAACAGC+TGG | 0.624032 | 3.1:+75315604 | MS.gene049391:intron |
| CAAGCTTGAGTCCCTTCCCA+TGG | 0.642664 | 3.1:-75316872 | None:intergenic |
| ACATCAATGATACATGGGCA+AGG | 0.643423 | 3.1:+75318156 | MS.gene049391:CDS |
| TGCCAACTTCCAACATATCG+GGG | 0.658114 | 3.1:-75318473 | None:intergenic |
| TAAAATTTCGAATGTTTCGG+CGG | 0.663405 | 3.1:-75318668 | None:intergenic |
| ATATTAGAATCTAACCCAAG+AGG | 0.678750 | 3.1:-75317071 | None:intergenic |
| GATATGTTGGAAGTTGGCAA+TGG | 0.679682 | 3.1:+75318477 | MS.gene049391:CDS |
| GCTGCATATGCCGGTCCTGG+AGG | 0.687897 | 3.1:+75318354 | MS.gene049391:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATAAAATTGAATTC+TGG | - | chr3.1:75315537-75315556 | None:intergenic | 10.0% |
| !! | CAAATATATAAATATAGAAT+AGG | - | chr3.1:75316273-75316292 | None:intergenic | 10.0% |
| !! | TAAATAAATATGTAAAACTA+AGG | - | chr3.1:75319183-75319202 | None:intergenic | 10.0% |
| !! | TAATTAAATTTCAAAAAGAT+AGG | - | chr3.1:75318393-75318412 | None:intergenic | 10.0% |
| !!! | TTATTTCTTAAATATATCAA+AGG | - | chr3.1:75316551-75316570 | None:intergenic | 10.0% |
| !! | AATTCTTAAATGAAAATGAA+TGG | + | chr3.1:75317377-75317396 | MS.gene049391:intron | 15.0% |
| !! | ACTACATTATAAACAAAATT+TGG | - | chr3.1:75318265-75318284 | None:intergenic | 15.0% |
| !! | AGAAAATAAGATTAGAAAAT+AGG | - | chr3.1:75319422-75319441 | None:intergenic | 15.0% |
| !! | CAATTGATCAAATAAATTTA+TGG | + | chr3.1:75315487-75315506 | MS.gene049391:intron | 15.0% |
| !! | TTCATTTATCTTATTCAAAA+AGG | + | chr3.1:75318825-75318844 | MS.gene049391:intron | 15.0% |
| !! | TTTCAATTAAAATAAGTGTA+TGG | - | chr3.1:75319073-75319092 | None:intergenic | 15.0% |
| !!! | AATAAGTTGAAAACATATTA+TGG | - | chr3.1:75315725-75315744 | None:intergenic | 15.0% |
| !!! | AGTTTTACATATTTATTTAC+AGG | + | chr3.1:75319184-75319203 | MS.gene049391:intron | 15.0% |
| !! | AAAAAAAAAAAAAACAAGGG+TGG | - | chr3.1:75318731-75318750 | None:intergenic | 20.0% |
| !! | AAATTCTATATCAAGTCAAA+AGG | - | chr3.1:75315952-75315971 | None:intergenic | 20.0% |
| !! | AACATATATATCACTCTTAA+CGG | - | chr3.1:75316069-75316088 | None:intergenic | 20.0% |
| !! | AAGTTCTTTATTAAGTCAAA+AGG | + | chr3.1:75316034-75316053 | MS.gene049391:intron | 20.0% |
| !! | AAGTTGTTCTATAAGTATTA+TGG | - | chr3.1:75315760-75315779 | None:intergenic | 20.0% |
| !! | AATATTAAAATTGTAGCAGT+GGG | + | chr3.1:75316244-75316263 | MS.gene049391:intron | 20.0% |
| !! | ACATATAAATTGAATCAATG+TGG | + | chr3.1:75317905-75317924 | MS.gene049391:intron | 20.0% |
| !! | ATAGTTATCAATCATTGAAA+TGG | + | chr3.1:75317414-75317433 | MS.gene049391:intron | 20.0% |
| !! | ATTATAAACAAAATTTGGAC+AGG | - | chr3.1:75318260-75318279 | None:intergenic | 20.0% |
| !! | CTTCATAAATAAATAGTTTG+CGG | + | chr3.1:75317717-75317736 | MS.gene049391:intron | 20.0% |
| !! | TACTTTCACAAAATTATACA+TGG | + | chr3.1:75316920-75316939 | MS.gene049391:intron | 20.0% |
| !! | TGATTCAATTTATATGTACT+AGG | - | chr3.1:75317902-75317921 | None:intergenic | 20.0% |
| !! | TGCAAAAACAATAGTATAAT+GGG | - | chr3.1:75318073-75318092 | None:intergenic | 20.0% |
| !! | TGTTCATAATAACAATACTA+TGG | + | chr3.1:75318566-75318585 | MS.gene049391:intron | 20.0% |
| !! | TTAAGAGTGATATATATGTT+TGG | + | chr3.1:75316069-75316088 | MS.gene049391:intron | 20.0% |
| !!! | ATTATACTATTGTTTTTGCA+GGG | + | chr3.1:75318073-75318092 | MS.gene049391:intron | 20.0% |
| !!! | CAGCATAATATATCTTTTTA+TGG | + | chr3.1:75317238-75317257 | MS.gene049391:intron | 20.0% |
| !!! | CATATGTTAATGTTATGTTT+TGG | + | chr3.1:75316487-75316506 | MS.gene049391:intron | 20.0% |
| !!! | TAGTACTATAACTTTAAGTT+GGG | - | chr3.1:75319141-75319160 | None:intergenic | 20.0% |
| !!! | TCAATGATTGATAACTATTA+AGG | - | chr3.1:75317412-75317431 | None:intergenic | 20.0% |
| !!! | TTAATATAAGTTGATGCTTA+AGG | + | chr3.1:75318755-75318774 | MS.gene049391:intron | 20.0% |
| !!! | TTTTGTTATGAGTTTACTTA+CGG | + | chr3.1:75318028-75318047 | MS.gene049391:intron | 20.0% |
| ! | AAAGTTAGTCATAATGAACA+TGG | - | chr3.1:75316970-75316989 | None:intergenic | 25.0% |
| ! | AAATGAAAAAATCATACACC+AGG | - | chr3.1:75318812-75318831 | None:intergenic | 25.0% |
| ! | ACATATTTATTTACAGGTCT+GGG | + | chr3.1:75319190-75319209 | MS.gene049391:intron | 25.0% |
| ! | ACCCTGATAAAATTATAGAA+TGG | - | chr3.1:75317780-75317799 | None:intergenic | 25.0% |
| ! | ACTATTTATTTATGAAGCAG+CGG | - | chr3.1:75317714-75317733 | None:intergenic | 25.0% |
| ! | ATATCACTGAATATACTTGA+GGG | + | chr3.1:75316375-75316394 | MS.gene049391:intron | 25.0% |
| ! | ATTTATGTGACATGATGATT+TGG | + | chr3.1:75315581-75315600 | MS.gene049391:intron | 25.0% |
| ! | CAATATTAAAATTGTAGCAG+TGG | + | chr3.1:75316243-75316262 | MS.gene049391:intron | 25.0% |
| ! | CCCTGATAAAATTATAGAAT+GGG | - | chr3.1:75317779-75317798 | None:intergenic | 25.0% |
| ! | CTGCAAAAACAATAGTATAA+TGG | - | chr3.1:75318074-75318093 | None:intergenic | 25.0% |
| ! | CTTCCAAATCAAATATAGTA+AGG | - | chr3.1:75316785-75316804 | None:intergenic | 25.0% |
| ! | GCAAAATAAAATCTTGATGA+AGG | + | chr3.1:75316002-75316021 | MS.gene049391:intron | 25.0% |
| ! | GCTTAAAATTTCGAATGTTT+CGG | - | chr3.1:75318674-75318693 | None:intergenic | 25.0% |
| ! | GTAGTACTATAACTTTAAGT+TGG | - | chr3.1:75319142-75319161 | None:intergenic | 25.0% |
| ! | GTATATTCAGTGATATCAAA+AGG | - | chr3.1:75316371-75316390 | None:intergenic | 25.0% |
| ! | GTTCCTTACTATATTTGATT+TGG | + | chr3.1:75316779-75316798 | MS.gene049391:intron | 25.0% |
| ! | TACATATTTATTTACAGGTC+TGG | + | chr3.1:75319189-75319208 | MS.gene049391:intron | 25.0% |
| ! | TATCAATGAAACGGTTATTA+AGG | + | chr3.1:75315644-75315663 | MS.gene049391:CDS | 25.0% |
| ! | TATGACAATTGTTACAATCT+CGG | + | chr3.1:75317815-75317834 | MS.gene049391:CDS | 25.0% |
| ! | TATGCTATAAGTGCTTAATT+AGG | + | chr3.1:75315863-75315882 | MS.gene049391:intron | 25.0% |
| ! | TCAAAAAGGTTAAATGAGTA+AGG | + | chr3.1:75318839-75318858 | MS.gene049391:intron | 25.0% |
| ! | TGATAAAATTATAGAATGGG+AGG | - | chr3.1:75317776-75317795 | None:intergenic | 25.0% |
| ! | TGGATTGTTATGATGATTAA+CGG | + | chr3.1:75315917-75315936 | MS.gene049391:intron | 25.0% |
| ! | TTCAGACTTCTAGATATTTA+TGG | - | chr3.1:75319031-75319050 | None:intergenic | 25.0% |
| ! | TTCTGTGACAAGAAATTTAA+AGG | + | chr3.1:75316329-75316348 | MS.gene049391:CDS | 25.0% |
| !! | CCCATTCTATAATTTTATCA+GGG | + | chr3.1:75317776-75317795 | MS.gene049391:intron | 25.0% |
| !! | GGTTCATTCAACATTTTATT+GGG | + | chr3.1:75318207-75318226 | MS.gene049391:intron | 25.0% |
| !! | GTTCATTCAACATTTTATTG+GGG | + | chr3.1:75318208-75318227 | MS.gene049391:intron | 25.0% |
| !! | TCCCATTCTATAATTTTATC+AGG | + | chr3.1:75317775-75317794 | MS.gene049391:intron | 25.0% |
| !! | TGGTTCATTCAACATTTTAT+TGG | + | chr3.1:75318206-75318225 | MS.gene049391:intron | 25.0% |
| !! | TTCTTGTTTATATTGTTACC+TGG | + | chr3.1:75318791-75318810 | MS.gene049391:intron | 25.0% |
| !! | TTTTTCATGTAACCAAGTTT+AGG | - | chr3.1:75317577-75317596 | None:intergenic | 25.0% |
| !!! | ATATTTGATTTGGAAGTGTA+GGG | + | chr3.1:75316789-75316808 | MS.gene049391:intron | 25.0% |
| !!! | CACTGCTACAATTTTAATAT+TGG | - | chr3.1:75316245-75316264 | None:intergenic | 25.0% |
| !!! | CATTATACTATTGTTTTTGC+AGG | + | chr3.1:75318072-75318091 | MS.gene049391:intron | 25.0% |
| !!! | TATATTTGATTTGGAAGTGT+AGG | + | chr3.1:75316788-75316807 | MS.gene049391:intron | 25.0% |
| !!! | TGAAATTATTTTTCCACAAC+TGG | + | chr3.1:75319047-75319066 | MS.gene049391:intron | 25.0% |
| !!! | TTATACTATTGTTTTTGCAG+GGG | + | chr3.1:75318074-75318093 | MS.gene049391:intron | 25.0% |
| AATGAGAACATCATATCCAA+AGG | - | chr3.1:75317297-75317316 | None:intergenic | 30.0% | |
| ATATTAGAATCTAACCCAAG+AGG | - | chr3.1:75317074-75317093 | None:intergenic | 30.0% | |
| CATCAGATGTAATTTAAACC+TGG | - | chr3.1:75317201-75317220 | None:intergenic | 30.0% | |
| CATTAACACCAAACTGAATT+TGG | + | chr3.1:75317325-75317344 | MS.gene049391:intron | 30.0% | |
| GATATCACTGAATATACTTG+AGG | + | chr3.1:75316374-75316393 | MS.gene049391:intron | 30.0% | |
| GCATTTGAAAATCTTGATGA+AGG | - | chr3.1:75315984-75316003 | None:intergenic | 30.0% | |
| GGTAAAATGATACCTAAACT+TGG | + | chr3.1:75317562-75317581 | MS.gene049391:intron | 30.0% | |
| TAAAATTTCGAATGTTTCGG+CGG | - | chr3.1:75318671-75318690 | None:intergenic | 30.0% | |
| TACGATGTTAAGTCGTTTAA+TGG | + | chr3.1:75317354-75317373 | MS.gene049391:intron | 30.0% | |
| TAGCTTCTAACTTCTATACT+CGG | - | chr3.1:75319100-75319119 | None:intergenic | 30.0% | |
| TGAACAACACTTCTATTCTT+AGG | - | chr3.1:75317141-75317160 | None:intergenic | 30.0% | |
| TGCACTATTCAATTTCTATG+TGG | + | chr3.1:75316691-75316710 | MS.gene049391:intron | 30.0% | |
| TGCATGCAATATCAATGAAA+CGG | + | chr3.1:75315635-75315654 | MS.gene049391:CDS | 30.0% | |
| TTATGCTGCAAAATAGTGAA+GGG | - | chr3.1:75319497-75319516 | None:intergenic | 30.0% | |
| TTGCAGCATAAGGTAATAAA+TGG | + | chr3.1:75319506-75319525 | MS.gene049391:intron | 30.0% | |
| TTTAGCCTACTAAGAACAAA+TGG | - | chr3.1:75319392-75319411 | None:intergenic | 30.0% | |
| TTTGTTCTTAGTAGGCTAAA+CGG | + | chr3.1:75319392-75319411 | MS.gene049391:intron | 30.0% | |
| ! | GCGTCTATGTGATAAATTTT+GGG | + | chr3.1:75318973-75318992 | MS.gene049391:intron | 30.0% |
| ! | TATCTTTTTATGGTGTCTGT+TGG | + | chr3.1:75317248-75317267 | MS.gene049391:intron | 30.0% |
| ! | TGCGTCTATGTGATAAATTT+TGG | + | chr3.1:75318972-75318991 | MS.gene049391:intron | 30.0% |
| ! | TTTTCTATTCGATCTGTGAA+TGG | + | chr3.1:75317987-75318006 | MS.gene049391:CDS | 30.0% |
| !! | GAGAGATAAAAGACTTTTTC+TGG | - | chr3.1:75318432-75318451 | None:intergenic | 30.0% |
| !! | GTGATAAATTTTGGGTCTTT+TGG | + | chr3.1:75318981-75319000 | MS.gene049391:intron | 30.0% |
| !!! | AACTTTTTCACTTCCTACTT+AGG | + | chr3.1:75316984-75317003 | MS.gene049391:intron | 30.0% |
| !!! | AATGTTATGTTTTGGCTAAG+TGG | + | chr3.1:75316495-75316514 | MS.gene049391:intron | 30.0% |
| !!! | ACGAGAAAAAACCGTTTTTT+TGG | - | chr3.1:75317848-75317867 | None:intergenic | 30.0% |
| !!! | ACTTTTTCACTTCCTACTTA+GGG | + | chr3.1:75316985-75317004 | MS.gene049391:intron | 30.0% |
| !!! | AGAAAAAACCGTTTTTTTGG+AGG | - | chr3.1:75317845-75317864 | None:intergenic | 30.0% |
| !!! | GAAAAAACCGTTTTTTTGGA+GGG | - | chr3.1:75317844-75317863 | None:intergenic | 30.0% |
| AACGACTTAACATCGTATCT+AGG | - | chr3.1:75317351-75317370 | None:intergenic | 35.0% | |
| AAGGAAATAAAACCAGCCTT+TGG | + | chr3.1:75317278-75317297 | MS.gene049391:intron | 35.0% | |
| AGAAACTAACTATGACACAG+TGG | - | chr3.1:75317515-75317534 | None:intergenic | 35.0% | |
| AGTGGACATAATATCTATGG+AGG | - | chr3.1:75317497-75317516 | None:intergenic | 35.0% | |
| ATGCAGATTTATTTGCCTCT+TGG | + | chr3.1:75317056-75317075 | MS.gene049391:CDS | 35.0% | |
| ATGGAAATGTCTTACGATCA+GGG | - | chr3.1:75316824-75316843 | None:intergenic | 35.0% | |
| ATTCTACATACTACGAAGAG+TGG | - | chr3.1:75317621-75317640 | None:intergenic | 35.0% | |
| ATTCTATGTGTGCATTTCAC+AGG | + | chr3.1:75317170-75317189 | MS.gene049391:intron | 35.0% | |
| ATTGCCAACTTCCAACATAT+CGG | - | chr3.1:75318478-75318497 | None:intergenic | 35.0% | |
| CACAGTGGACATAATATCTA+TGG | - | chr3.1:75317500-75317519 | None:intergenic | 35.0% | |
| CCATGTATCATTGATGTCAT+CGG | - | chr3.1:75318153-75318172 | None:intergenic | 35.0% | |
| CCTACTAAGAACAAATGGAA+AGG | - | chr3.1:75319387-75319406 | None:intergenic | 35.0% | |
| CCTTTCCATTTGTTCTTAGT+AGG | + | chr3.1:75319384-75319403 | MS.gene049391:intron | 35.0% | |
| CGATGACATCAATGATACAT+GGG | + | chr3.1:75318151-75318170 | MS.gene049391:CDS | 35.0% | |
| CGTAGTATGTAGAATGTAGA+TGG | + | chr3.1:75317626-75317645 | MS.gene049391:intron | 35.0% | |
| CTTATGCTGCAAAATAGTGA+AGG | - | chr3.1:75319498-75319517 | None:intergenic | 35.0% | |
| GAAACGGTTATTAAGGAAAC+AGG | + | chr3.1:75315651-75315670 | MS.gene049391:CDS | 35.0% | |
| GAAGTCATTGCTGTAAATCA+AGG | + | chr3.1:75318700-75318719 | MS.gene049391:CDS | 35.0% | |
| GGTTATGTGTACGTCAATAT+AGG | + | chr3.1:75316203-75316222 | MS.gene049391:CDS | 35.0% | |
| TATCTAGGCCAAATTCAGTT+TGG | - | chr3.1:75317336-75317355 | None:intergenic | 35.0% | |
| TCCTTTATCAGGAAATCGTT+TGG | + | chr3.1:75319217-75319236 | MS.gene049391:CDS | 35.0% | |
| TCGATCTGTGAATGGTAATA+AGG | + | chr3.1:75317995-75318014 | MS.gene049391:intron | 35.0% | |
| TGCAGATTTATTTGCCTCTT+GGG | + | chr3.1:75317057-75317076 | MS.gene049391:CDS | 35.0% | |
| TGGAATTCATGTTTCCGTAA+GGG | + | chr3.1:75319313-75319332 | MS.gene049391:CDS | 35.0% | |
| TGTGACTATAACAGCATCAT+GGG | + | chr3.1:75319271-75319290 | MS.gene049391:CDS | 35.0% | |
| TTCAAGCTTGACAAGTCTTA+TGG | + | chr3.1:75315696-75315715 | MS.gene049391:intron | 35.0% | |
| TTCCTCATCCAATTGAAAGT+CGG | - | chr3.1:75316452-75316471 | None:intergenic | 35.0% | |
| TTGGCATATATTCTGATGCT+GGG | + | chr3.1:75316892-75316911 | MS.gene049391:CDS | 35.0% | |
| TTGTGACTATAACAGCATCA+TGG | + | chr3.1:75319270-75319289 | MS.gene049391:CDS | 35.0% | |
| TTGTGCAAAGATGATCTTCT+TGG | + | chr3.1:75317444-75317463 | MS.gene049391:intron | 35.0% | |
| TTTACGACCAGTTTCATTGA+GGG | - | chr3.1:75317966-75317985 | None:intergenic | 35.0% | |
| ! | CTTCACTATTTTGCAGCATA+AGG | + | chr3.1:75319496-75319515 | MS.gene049391:intron | 35.0% |
| ! | GGATCAATTTTCCACGAAAA+TGG | + | chr3.1:75317031-75317050 | MS.gene049391:CDS | 35.0% |
| ! | TTTGCGGTTATGTATTTCTG+TGG | + | chr3.1:75317733-75317752 | MS.gene049391:intron | 35.0% |
| ! | TTTTACGACCAGTTTCATTG+AGG | - | chr3.1:75317967-75317986 | None:intergenic | 35.0% |
| ! | TTTTCGTGGAAAATTGATCC+TGG | - | chr3.1:75317031-75317050 | None:intergenic | 35.0% |
| !!! | GGTGTCTGTTGGATTTTTTA+AGG | + | chr3.1:75317259-75317278 | MS.gene049391:intron | 35.0% |
| AATAAGTGTATGGCCAGTTG+TGG | - | chr3.1:75319063-75319082 | None:intergenic | 40.0% | |
| ACATAATATCTATGGAGGCC+TGG | - | chr3.1:75317492-75317511 | None:intergenic | 40.0% | |
| ACATCAATGATACATGGGCA+AGG | + | chr3.1:75318156-75318175 | MS.gene049391:CDS | 40.0% | |
| ACATCGCAACCAATCAAAAG+AGG | - | chr3.1:75318637-75318656 | None:intergenic | 40.0% | |
| ACTACGAGCTTGAAGTATGT+TGG | + | chr3.1:75319157-75319176 | MS.gene049391:intron | 40.0% | |
| AGAACATCATATCCAAAGGC+TGG | - | chr3.1:75317293-75317312 | None:intergenic | 40.0% | |
| AGTTAGAAGCTAGTCCAAAC+TGG | + | chr3.1:75319108-75319127 | MS.gene049391:intron | 40.0% | |
| ATGTTTCCGTAAGGGATTTG+TGG | + | chr3.1:75319321-75319340 | MS.gene049391:CDS | 40.0% | |
| ATTTATTTACAGGTCTGGGC+AGG | + | chr3.1:75319194-75319213 | MS.gene049391:intron | 40.0% | |
| CAAAAAACACACCAGCACAT+CGG | - | chr3.1:75316613-75316632 | None:intergenic | 40.0% | |
| CAACTTGAACTTTCCTTCCT+TGG | - | chr3.1:75318903-75318922 | None:intergenic | 40.0% | |
| CAGATACTCTTTATGTGTCC+TGG | + | chr3.1:75317102-75317121 | MS.gene049391:intron | 40.0% | |
| CAGCACAACTCAAAAGGAAA+CGG | + | chr3.1:75317541-75317560 | MS.gene049391:intron | 40.0% | |
| CATAATATCTATGGAGGCCT+GGG | - | chr3.1:75317491-75317510 | None:intergenic | 40.0% | |
| CATCTTAGTGACTTATCTCG+AGG | + | chr3.1:75317676-75317695 | MS.gene049391:intron | 40.0% | |
| CCATCTAAAAGTCAAAGTCC+AGG | - | chr3.1:75318189-75318208 | None:intergenic | 40.0% | |
| CCGATGACATCAATGATACA+TGG | + | chr3.1:75318150-75318169 | MS.gene049391:CDS | 40.0% | |
| CTGGAATTCATGTTTCCGTA+AGG | + | chr3.1:75319312-75319331 | MS.gene049391:CDS | 40.0% | |
| CTTGGCATATATTCTGATGC+TGG | + | chr3.1:75316891-75316910 | MS.gene049391:CDS | 40.0% | |
| GACATGTAAAAGCCCTAAGT+AGG | - | chr3.1:75317000-75317019 | None:intergenic | 40.0% | |
| GATATGTTGGAAGTTGGCAA+TGG | + | chr3.1:75318477-75318496 | MS.gene049391:CDS | 40.0% | |
| GATCGTAAGACATTTCCATC+AGG | + | chr3.1:75316825-75316844 | MS.gene049391:CDS | 40.0% | |
| GATGGAAATGTCTTACGATC+AGG | - | chr3.1:75316825-75316844 | None:intergenic | 40.0% | |
| GCCAAACGATTTCCTGATAA+AGG | - | chr3.1:75319221-75319240 | None:intergenic | 40.0% | |
| TAGAAGCAGCACAACTCAAA+AGG | + | chr3.1:75317535-75317554 | MS.gene049391:intron | 40.0% | |
| TCCTCATCCAATTGAAAGTC+GGG | - | chr3.1:75316451-75316470 | None:intergenic | 40.0% | |
| TGCTGATCTTAATGACCGAT+GGG | + | chr3.1:75318332-75318351 | MS.gene049391:CDS | 40.0% | |
| TGGAATAGATGGTTGTAGTC+AGG | + | chr3.1:75318924-75318943 | MS.gene049391:CDS | 40.0% | |
| TGTCTATCCCGACTTTCAAT+TGG | + | chr3.1:75316441-75316460 | MS.gene049391:intron | 40.0% | |
| TTGCCAACTTCCAACATATC+GGG | - | chr3.1:75318477-75318496 | None:intergenic | 40.0% | |
| TTGCTGATCTTAATGACCGA+TGG | + | chr3.1:75318331-75318350 | MS.gene049391:CDS | 40.0% | |
| ! | AATCTGCATCACCATTTTCG+TGG | - | chr3.1:75317045-75317064 | None:intergenic | 40.0% |
| ! | CTTGGAACTTCACACTTTTG+CGG | + | chr3.1:75317462-75317481 | MS.gene049391:intron | 40.0% |
| ! | TTGTGGCAGGTAATTTTGCT+TGG | + | chr3.1:75319338-75319357 | MS.gene049391:intron | 40.0% |
| !! | ATGATTTGGTGTCGTGTAGA+TGG | + | chr3.1:75315595-75315614 | MS.gene049391:intron | 40.0% |
| !! | CCTGGACTTTGACTTTTAGA+TGG | + | chr3.1:75318186-75318205 | MS.gene049391:intron | 40.0% |
| !! | CGTCAATATAGGTACTGATC+TGG | + | chr3.1:75316214-75316233 | MS.gene049391:intron | 40.0% |
| !! | GTTCAAGTTGCTGGAATAGA+TGG | + | chr3.1:75318913-75318932 | MS.gene049391:CDS | 40.0% |
| ACTTTATGCATCCGATGTGC+TGG | + | chr3.1:75316599-75316618 | MS.gene049391:intron | 45.0% | |
| AGTTGGGCAAAGATCCAGTT+TGG | - | chr3.1:75319125-75319144 | None:intergenic | 45.0% | |
| ATCACGCATAGGTGGATATC+TGG | - | chr3.1:75317942-75317961 | None:intergenic | 45.0% | |
| ATCGTTTGGCTGTTGCTCTT+TGG | + | chr3.1:75319231-75319250 | MS.gene049391:CDS | 45.0% | |
| ATGTGTCCTGGACTTTGTAG+AGG | + | chr3.1:75317114-75317133 | MS.gene049391:intron | 45.0% | |
| ATGTTGGAAGTTGGCAATGG+TGG | + | chr3.1:75318480-75318499 | MS.gene049391:CDS | 45.0% | |
| CATGGGCAAGGTTAAAATCC+TGG | + | chr3.1:75318168-75318187 | MS.gene049391:intron | 45.0% | |
| CGTGGAAAATTGATCCTGGT+CGG | - | chr3.1:75317027-75317046 | None:intergenic | 45.0% | |
| CTGCTTAGAGCAGTTTCGTA+TGG | - | chr3.1:75319364-75319383 | None:intergenic | 45.0% | |
| GACGTACACATAACCCAACT+TGG | - | chr3.1:75316198-75316217 | None:intergenic | 45.0% | |
| GATTGTGAACTTGTGTGTGC+AGG | + | chr3.1:75318609-75318628 | MS.gene049391:intron | 45.0% | |
| GCAAGTGCTTTGATTCCTGA+TGG | - | chr3.1:75316843-75316862 | None:intergenic | 45.0% | |
| GCAGAGTAAGATGCTGTAGA+TGG | - | chr3.1:75319596-75319615 | None:intergenic | 45.0% | |
| TACAATGTGCAGACGATTGC+TGG | + | chr3.1:75316304-75316323 | MS.gene049391:intron | 45.0% | |
| TACCTGCCACAAATCCCTTA+CGG | - | chr3.1:75319330-75319349 | None:intergenic | 45.0% | |
| TCCCGACTTTCAATTGGATG+AGG | + | chr3.1:75316447-75316466 | MS.gene049391:intron | 45.0% | |
| TCCCTTCCCATGGACATAAT+CGG | - | chr3.1:75316865-75316884 | None:intergenic | 45.0% | |
| TCGGCATCCCTCCAAAAAAA+CGG | + | chr3.1:75317834-75317853 | MS.gene049391:CDS | 45.0% | |
| TGCCAACTTCCAACATATCG+GGG | - | chr3.1:75318476-75318495 | None:intergenic | 45.0% | |
| TGTTGACGATCCTGCTCTAT+GGG | + | chr3.1:75318097-75318116 | MS.gene049391:CDS | 45.0% | |
| TTAGGACCTCTACAAAGTCC+AGG | - | chr3.1:75317123-75317142 | None:intergenic | 45.0% | |
| TTTACATGTCAAGTCCGACC+AGG | + | chr3.1:75317010-75317029 | MS.gene049391:CDS | 45.0% | |
| ! | CACTTGCCGATTATGTCCAT+GGG | + | chr3.1:75316856-75316875 | MS.gene049391:CDS | 45.0% |
| ! | CAGCATATGGGCTTTAGCAA+AGG | + | chr3.1:75318533-75318552 | MS.gene049391:CDS | 45.0% |
| ! | TGCACTGGTATCAACTGGAT+TGG | + | chr3.1:75316172-75316191 | MS.gene049391:CDS | 45.0% |
| !! | ACTTATCTCGAGGCGCTTTT+CGG | + | chr3.1:75317686-75317705 | MS.gene049391:intron | 45.0% |
| !! | ATCAACTGGATTGGCCAAGT+TGG | + | chr3.1:75316181-75316200 | MS.gene049391:CDS | 45.0% |
| !! | CAGGCACAGTTGGTAATAGT+TGG | + | chr3.1:75318120-75318139 | MS.gene049391:CDS | 45.0% |
| !! | GGAAGGAAAGTTCAAGTTGC+TGG | + | chr3.1:75318904-75318923 | MS.gene049391:CDS | 45.0% |
| !! | TCAACTGGATTGGCCAAGTT+GGG | + | chr3.1:75316182-75316201 | MS.gene049391:CDS | 45.0% |
| !! | AAAAAAAAAAAAAAAAAACA+AGG | - | chr3.1:75318735-75318754 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAAAAACAA+GGG | - | chr3.1:75318734-75318753 | None:intergenic | 5.0% |
| AACAGTGTCTAGCGCGTAGA+TGG | + | chr3.1:75315897-75315916 | MS.gene049391:intron | 50.0% | |
| ACCGTGCTCACTTCAGCATA+TGG | + | chr3.1:75318520-75318539 | MS.gene049391:CDS | 50.0% | |
| ACTCACTTGGAGTCCAAGGA+AGG | + | chr3.1:75318887-75318906 | MS.gene049391:CDS | 50.0% | |
| ATACCAGTGCATCAGCTGCA+AGG | - | chr3.1:75316163-75316182 | None:intergenic | 50.0% | |
| ATGTCTTACGATCAGGGACC+AGG | - | chr3.1:75316818-75316837 | None:intergenic | 50.0% | |
| CAATGGTGGCATGACTTACC+AGG | + | chr3.1:75318494-75318513 | MS.gene049391:CDS | 50.0% | |
| CCCATATGCTGAAGTGAGCA+CGG | - | chr3.1:75318524-75318543 | None:intergenic | 50.0% | |
| CCGTGCTCACTTCAGCATAT+GGG | + | chr3.1:75318521-75318540 | MS.gene049391:CDS | 50.0% | |
| CGTGATGCCCTCAATGAAAC+TGG | + | chr3.1:75317956-75317975 | MS.gene049391:CDS | 50.0% | |
| GACCCCGATATGTTGGAAGT+TGG | + | chr3.1:75318471-75318490 | MS.gene049391:intron | 50.0% | |
| GCCGATTATGTCCATGGGAA+GGG | + | chr3.1:75316861-75316880 | MS.gene049391:CDS | 50.0% | |
| TATCCTTGCAGCTGATGCAC+TGG | + | chr3.1:75316157-75316176 | MS.gene049391:intron | 50.0% | |
| TGAAGTGAGCACGGTATTCC+TGG | - | chr3.1:75318515-75318534 | None:intergenic | 50.0% | |
| TGCATTTCACAGGTTACGCC+AGG | + | chr3.1:75317180-75317199 | MS.gene049391:intron | 50.0% | |
| TGTCGTGTAGATGGAACAGC+TGG | + | chr3.1:75315604-75315623 | MS.gene049391:intron | 50.0% | |
| TGTCTCTCTGCAGACTCACT+TGG | + | chr3.1:75318874-75318893 | MS.gene049391:intron | 50.0% | |
| TTCCGTAAGGGATTTGTGGC+AGG | + | chr3.1:75319325-75319344 | MS.gene049391:CDS | 50.0% | |
| TTCGACAGACCCCGATATGT+TGG | + | chr3.1:75318464-75318483 | MS.gene049391:intron | 50.0% | |
| ! | GCACTTGCCGATTATGTCCA+TGG | + | chr3.1:75316855-75316874 | MS.gene049391:CDS | 50.0% |
| ! | GCTGATGCACTGGTATCAAC+TGG | + | chr3.1:75316167-75316186 | MS.gene049391:intron | 50.0% |
| ! | GTGCAGGCTCCTCTTTTGAT+TGG | + | chr3.1:75318625-75318644 | MS.gene049391:intron | 50.0% |
| ! | GTGTTGACGATCCTGCTCTA+TGG | + | chr3.1:75318096-75318115 | MS.gene049391:CDS | 50.0% |
| ! | TGCCGATTATGTCCATGGGA+AGG | + | chr3.1:75316860-75316879 | MS.gene049391:CDS | 50.0% |
| ! | TTTGGAAGTGTAGGGTGACC+TGG | + | chr3.1:75316797-75316816 | MS.gene049391:intron | 50.0% |
| !! | TCATTGAGGGCATCACGCAT+AGG | - | chr3.1:75317953-75317972 | None:intergenic | 50.0% |
| ACAGCATCATGGGCAGCACT+CGG | + | chr3.1:75319281-75319300 | MS.gene049391:CDS | 55.0% | |
| ACCATTCCATCCTCCAGGAC+CGG | - | chr3.1:75318367-75318386 | None:intergenic | 55.0% | |
| CAAGCTTGAGTCCCTTCCCA+TGG | - | chr3.1:75316875-75316894 | None:intergenic | 55.0% | |
| CATGGGAAGGGACTCAAGCT+TGG | + | chr3.1:75316873-75316892 | MS.gene049391:CDS | 55.0% | |
| GCAGACTCACTTGGAGTCCA+AGG | + | chr3.1:75318883-75318902 | MS.gene049391:intron | 55.0% | |
| GGTGTACCATTCCATCCTCC+AGG | - | chr3.1:75318372-75318391 | None:intergenic | 55.0% | |
| GTCTGGGCAGGTCCTTTATC+AGG | + | chr3.1:75319206-75319225 | MS.gene049391:CDS | 55.0% | |
| ! | TCACACTTTTGCGGTGACCC+AGG | + | chr3.1:75317471-75317490 | MS.gene049391:intron | 55.0% |
| !! | TTGAGGGCATCACGCATAGG+TGG | - | chr3.1:75317950-75317969 | None:intergenic | 55.0% |
| ACTGTGCCTGCCCATAGAGC+AGG | - | chr3.1:75318110-75318129 | None:intergenic | 60.0% | |
| CAGCATCATGGGCAGCACTC+GGG | + | chr3.1:75319282-75319301 | MS.gene049391:CDS | 60.0% | |
| CATATGCCGGTCCTGGAGGA+TGG | + | chr3.1:75318358-75318377 | MS.gene049391:CDS | 60.0% | |
| GACCGGCATATGCAGCCCAT+CGG | - | chr3.1:75318350-75318369 | None:intergenic | 60.0% | |
| GACGATCCTGCTCTATGGGC+AGG | + | chr3.1:75318101-75318120 | MS.gene049391:CDS | 60.0% | |
| GCAGCACTCGGGCTTGAATC+TGG | + | chr3.1:75319293-75319312 | MS.gene049391:CDS | 60.0% | |
| GCTCTATGGGCAGGCACAGT+TGG | + | chr3.1:75318110-75318129 | MS.gene049391:CDS | 60.0% | |
| !! | GACCGATGGGCTGCATATGC+CGG | + | chr3.1:75318345-75318364 | MS.gene049391:CDS | 60.0% |
| GCCGGTCCTGGAGGATGGAA+TGG | + | chr3.1:75318363-75318382 | MS.gene049391:CDS | 65.0% | |
| GCTGCATATGCCGGTCCTGG+AGG | + | chr3.1:75318354-75318373 | MS.gene049391:CDS | 65.0% | |
| TGGGCTGCATATGCCGGTCC+TGG | + | chr3.1:75318351-75318370 | MS.gene049391:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 75315458 | 75319622 | 75315458 | ID=MS.gene049391 |
| chr3.1 | mRNA | 75315458 | 75319622 | 75315458 | ID=MS.gene049391.t1;Parent=MS.gene049391 |
| chr3.1 | exon | 75315458 | 75315462 | 75315458 | ID=MS.gene049391.t1.exon1;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75315458 | 75315462 | 75315458 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75315614 | 75315672 | 75315614 | ID=MS.gene049391.t1.exon2;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75315614 | 75315672 | 75315614 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75316168 | 75316224 | 75316168 | ID=MS.gene049391.t1.exon3;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75316168 | 75316224 | 75316168 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75316316 | 75316350 | 75316316 | ID=MS.gene049391.t1.exon4;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75316316 | 75316350 | 75316316 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75316810 | 75316913 | 75316810 | ID=MS.gene049391.t1.exon5;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75316810 | 75316913 | 75316810 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75317006 | 75317078 | 75317006 | ID=MS.gene049391.t1.exon6;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75317006 | 75317078 | 75317006 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75317797 | 75317855 | 75317797 | ID=MS.gene049391.t1.exon7;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75317797 | 75317855 | 75317797 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75317943 | 75318008 | 75317943 | ID=MS.gene049391.t1.exon8;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75317943 | 75318008 | 75317943 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75318094 | 75318177 | 75318094 | ID=MS.gene049391.t1.exon9;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75318094 | 75318177 | 75318094 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75318320 | 75318384 | 75318320 | ID=MS.gene049391.t1.exon10;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75318320 | 75318384 | 75318320 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75318472 | 75318554 | 75318472 | ID=MS.gene049391.t1.exon11;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75318472 | 75318554 | 75318472 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75318631 | 75318721 | 75318631 | ID=MS.gene049391.t1.exon12;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75318631 | 75318721 | 75318631 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75318887 | 75318945 | 75318887 | ID=MS.gene049391.t1.exon13;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75318887 | 75318945 | 75318887 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75319206 | 75319346 | 75319206 | ID=MS.gene049391.t1.exon14;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75319206 | 75319346 | 75319206 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| chr3.1 | exon | 75319512 | 75319622 | 75319512 | ID=MS.gene049391.t1.exon15;Parent=MS.gene049391.t1 |
| chr3.1 | CDS | 75319512 | 75319622 | 75319512 | ID=cds.MS.gene049391.t1;Parent=MS.gene049391.t1 |
| Gene Sequence |
| Protein sequence |
