Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004948.t1 | XP_013468841.1 | 94.9 | 409 | 21 | 0 | 1 | 409 | 1 | 409 | 2.50E-232 | 814.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004948.t1 | P14749 | 78.3 | 369 | 80 | 0 | 41 | 409 | 43 | 411 | 2.9e-176 | 619.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004948.t1 | A0A072VNB8 | 94.9 | 409 | 21 | 0 | 1 | 409 | 1 | 409 | 1.8e-232 | 814.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene004948 | MS.gene036941 | PPI |
| MS.gene004948 | MS.gene013419 | PPI |
| MS.gene004948 | MS.gene87685 | PPI |
| MS.gene004948 | MS.gene27501 | PPI |
| MS.gene004948 | MS.gene27500 | PPI |
| MS.gene059347 | MS.gene004948 | PPI |
| MS.gene004948 | MS.gene049391 | PPI |
| MS.gene004948 | MS.gene036942 | PPI |
| MS.gene004948 | MS.gene92763 | PPI |
| MS.gene004948 | MS.gene06516 | PPI |
| MS.gene004948 | MS.gene92764 | PPI |
| MS.gene004948 | MS.gene87684 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004948.t1 | MTR_1g077520 | 94.866 | 409 | 21 | 0 | 1 | 409 | 1 | 409 | 0.0 | 809 |
| MS.gene004948.t1 | MTR_6g086625 | 80.741 | 405 | 75 | 2 | 4 | 407 | 3 | 405 | 0.0 | 694 |
| MS.gene004948.t1 | MTR_1g077480 | 79.218 | 409 | 80 | 3 | 4 | 407 | 3 | 411 | 0.0 | 688 |
| MS.gene004948.t1 | MTR_1g077520 | 96.407 | 334 | 12 | 0 | 1 | 334 | 1 | 334 | 0.0 | 674 |
| MS.gene004948.t1 | MTR_6g086575 | 77.531 | 405 | 87 | 2 | 4 | 407 | 3 | 404 | 0.0 | 669 |
| MS.gene004948.t1 | MTR_6g069140 | 75.448 | 391 | 91 | 2 | 21 | 407 | 30 | 419 | 0.0 | 638 |
| MS.gene004948.t1 | MTR_7g073650 | 65.499 | 371 | 126 | 2 | 41 | 409 | 38 | 408 | 0.0 | 521 |
| MS.gene004948.t1 | MTR_7g073640 | 61.940 | 402 | 150 | 3 | 10 | 409 | 9 | 409 | 0.0 | 520 |
| MS.gene004948.t1 | MTR_3g094160 | 62.973 | 370 | 132 | 3 | 44 | 409 | 59 | 427 | 1.07e-180 | 510 |
| MS.gene004948.t1 | MTR_1g078410 | 52.632 | 209 | 42 | 4 | 7 | 209 | 4 | 161 | 1.91e-63 | 202 |
| MS.gene004948.t1 | MTR_0279s0030 | 54.400 | 125 | 55 | 2 | 287 | 409 | 101 | 225 | 5.09e-40 | 142 |
| MS.gene004948.t1 | MTR_0279s0030 | 54.400 | 125 | 55 | 2 | 287 | 409 | 185 | 309 | 6.90e-39 | 142 |
| MS.gene004948.t1 | MTR_0279s0030 | 54.400 | 125 | 55 | 2 | 287 | 409 | 250 | 374 | 2.54e-38 | 142 |
| MS.gene004948.t1 | MTR_8g089725 | 25.427 | 468 | 230 | 15 | 54 | 405 | 38 | 502 | 2.94e-27 | 113 |
| MS.gene004948.t1 | MTR_8g089735 | 25.214 | 468 | 231 | 15 | 54 | 405 | 38 | 502 | 1.69e-26 | 111 |
| MS.gene004948.t1 | MTR_3g086580 | 27.451 | 357 | 165 | 11 | 50 | 315 | 36 | 389 | 3.41e-22 | 99.4 |
| MS.gene004948.t1 | MTR_8g089740 | 26.216 | 370 | 182 | 12 | 33 | 316 | 15 | 379 | 2.60e-21 | 96.7 |
| MS.gene004948.t1 | MTR_2g096530 | 27.793 | 367 | 173 | 13 | 38 | 315 | 22 | 385 | 4.50e-21 | 95.9 |
| MS.gene004948.t1 | MTR_8g089745 | 26.724 | 348 | 168 | 11 | 54 | 316 | 38 | 383 | 4.52e-21 | 95.5 |
| MS.gene004948.t1 | MTR_8g089745 | 26.724 | 348 | 168 | 11 | 54 | 316 | 38 | 383 | 1.03e-20 | 94.7 |
| MS.gene004948.t1 | MTR_3g086580 | 31.844 | 179 | 93 | 6 | 164 | 315 | 26 | 202 | 7.39e-14 | 73.2 |
| MS.gene004948.t1 | MTR_3g094180 | 50.794 | 63 | 28 | 1 | 320 | 379 | 7 | 69 | 1.90e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004948.t1 | AT5G08370 | 72.527 | 364 | 100 | 0 | 43 | 406 | 29 | 392 | 0.0 | 587 |
| MS.gene004948.t1 | AT5G08370 | 72.131 | 366 | 102 | 0 | 41 | 406 | 1 | 366 | 0.0 | 584 |
| MS.gene004948.t1 | AT5G08380 | 59.268 | 410 | 166 | 1 | 1 | 409 | 1 | 410 | 0.0 | 524 |
| MS.gene004948.t1 | AT3G56310 | 63.881 | 371 | 129 | 4 | 43 | 409 | 62 | 431 | 6.62e-180 | 508 |
| MS.gene004948.t1 | AT3G56310 | 59.569 | 371 | 121 | 5 | 43 | 409 | 62 | 407 | 6.19e-161 | 459 |
| MS.gene004948.t1 | AT5G08380 | 61.392 | 316 | 122 | 0 | 1 | 316 | 1 | 316 | 3.12e-149 | 426 |
| MS.gene004948.t1 | AT3G26380 | 25.788 | 349 | 169 | 11 | 54 | 315 | 42 | 387 | 1.10e-20 | 94.4 |
| MS.gene004948.t1 | AT3G26380 | 25.501 | 349 | 170 | 11 | 54 | 315 | 42 | 387 | 4.77e-20 | 92.8 |
Find 103 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAACGGGACTTGCAAATT+TGG | 0.157242 | 1.4:-63502475 | MS.gene004948:CDS |
| TTGATTAAATACCTTTCTTT+AGG | 0.192815 | 1.4:+63500876 | None:intergenic |
| AGGAGATATCTTGTTGAAAA+TGG | 0.214999 | 1.4:-63503876 | MS.gene004948:CDS |
| TGGAGTAGCTGGAATCATTT+TGG | 0.218651 | 1.4:-63502713 | MS.gene004948:CDS |
| ATGCTAAAACATTTGCTTCT+TGG | 0.230773 | 1.4:-63501093 | MS.gene004948:CDS |
| GGGTATCATTATCTTAATTT+AGG | 0.240621 | 1.4:-63502453 | MS.gene004948:intron |
| TCAACAGATGCTCGCTTATT+AGG | 0.241405 | 1.4:-63503930 | MS.gene004948:CDS |
| TGATTAAATACCTTTCTTTA+GGG | 0.274270 | 1.4:+63500877 | None:intergenic |
| TGCTAAAACATTTGCTTCTT+GGG | 0.279893 | 1.4:-63501092 | MS.gene004948:intron |
| TCAACGGGACTTGCAAATTT+GGG | 0.283165 | 1.4:-63502474 | MS.gene004948:CDS |
| TTGAAAATGATAGGGAAATA+TGG | 0.285973 | 1.4:-63501351 | MS.gene004948:intron |
| ATCGTTCTCATTTCAGCATA+TGG | 0.316070 | 1.4:-63500000 | MS.gene004948:CDS |
| CACAACAAAGGTTTAAAGTT+GGG | 0.316396 | 1.4:-63501275 | MS.gene004948:CDS |
| ACACTGATAGGCTCCTTTAT+TGG | 0.321778 | 1.4:-63499838 | MS.gene004948:intron |
| ACCTTTGTTGTGAACATAAT+CGG | 0.329837 | 1.4:+63501286 | None:intergenic |
| CAGGTGATATTGAAGATAAT+TGG | 0.330171 | 1.4:-63500387 | MS.gene004948:CDS |
| TTCATTAAGGCTTCACTCAT+TGG | 0.334944 | 1.4:+63500785 | None:intergenic |
| TGTCCAAGGAGAAGGTAATT+AGG | 0.356635 | 1.4:-63503896 | MS.gene004948:CDS |
| TGACCTTCCAGATTTCATTA+AGG | 0.359870 | 1.4:+63500772 | None:intergenic |
| CTTGCATCAACAATGGCTTC+TGG | 0.362303 | 1.4:+63499107 | None:intergenic |
| TTGTTGATGCAAGAGATCTA+TGG | 0.366588 | 1.4:-63499097 | MS.gene004948:CDS |
| AGTGAAAAGTAATAATGATT+TGG | 0.371753 | 1.4:-63499600 | MS.gene004948:CDS |
| ACATCACAACCAACCAATAA+AGG | 0.380860 | 1.4:+63499825 | None:intergenic |
| AGTGAAGCCTTAATGAAATC+TGG | 0.387023 | 1.4:-63500779 | MS.gene004948:CDS |
| TGAGGGAAATGTTGCAGTAT+TGG | 0.405098 | 1.4:+63501325 | None:intergenic |
| GAAAGTATAGTTCGTGAAAC+AGG | 0.405474 | 1.4:-63502677 | MS.gene004948:intron |
| GAGGGAAATGTTGCAGTATT+GGG | 0.406174 | 1.4:+63501326 | None:intergenic |
| TTCCCAACCTCGAGCATGTC+AGG | 0.417527 | 1.4:+63500046 | None:intergenic |
| TCGTTCTCATTTCAGCATAT+GGG | 0.420766 | 1.4:-63499999 | MS.gene004948:CDS |
| AATAAGCGAGCATCTGTTGA+TGG | 0.424817 | 1.4:+63503933 | None:intergenic |
| TCTTCATGTCCCAGTGATCC+AGG | 0.429018 | 1.4:+63501121 | None:intergenic |
| AATCTCTCAGGTGGAGTAGC+TGG | 0.429622 | 1.4:-63502724 | MS.gene004948:intron |
| TAAACGTATGCCTGGATCAC+TGG | 0.433474 | 1.4:-63501131 | MS.gene004948:CDS |
| AACATTTCCCTCAGGAATGA+AGG | 0.436676 | 1.4:-63501315 | MS.gene004948:CDS |
| GGAAATAGTTGGAGAACAAC+AGG | 0.439997 | 1.4:-63500406 | MS.gene004948:CDS |
| ATTGCATCTTGGTCTGATAT+AGG | 0.446102 | 1.4:-63499137 | MS.gene004948:CDS |
| GCAGATAAACTAGGAGTTCA+AGG | 0.450905 | 1.4:-63499629 | MS.gene004948:intron |
| ATCCTGACATGCTCGAGGTT+GGG | 0.468044 | 1.4:-63500048 | MS.gene004948:CDS |
| AACAGATGGGCATCGTATGC+TGG | 0.469443 | 1.4:-63500196 | MS.gene004948:CDS |
| TGATAGGCTCCTTTATTGGT+TGG | 0.471562 | 1.4:-63499834 | MS.gene004948:intron |
| TTGGGGATCTACTCAGATGC+TGG | 0.473654 | 1.4:-63501257 | MS.gene004948:CDS |
| TCACAACAAAGGTTTAAAGT+TGG | 0.475334 | 1.4:-63501276 | MS.gene004948:CDS |
| TCTCCTAATTACCTTCTCCT+TGG | 0.477025 | 1.4:+63503893 | None:intergenic |
| GCTGATGCAATGGTGTCAAC+GGG | 0.486539 | 1.4:-63502489 | MS.gene004948:CDS |
| CAGCATATGGGCTTTAGCTA+AGG | 0.488753 | 1.4:-63499987 | MS.gene004948:intron |
| AGCTGATGCAATGGTGTCAA+CGG | 0.491878 | 1.4:-63502490 | MS.gene004948:CDS |
| TATCTTGTTGAAAATGGACT+TGG | 0.491893 | 1.4:-63503870 | MS.gene004948:CDS |
| ATGGGAAGACCCAGCAACAT+GGG | 0.494903 | 1.4:-63500440 | MS.gene004948:CDS |
| GTTGGTTATTAGTTCATATG+TGG | 0.497210 | 1.4:+63499785 | None:intergenic |
| ACTTGTAGTAAACGTATGCC+TGG | 0.499229 | 1.4:-63501139 | MS.gene004948:CDS |
| TCTTCTTCTCAATGTGTGAA+TGG | 0.499960 | 1.4:-63500748 | MS.gene004948:intron |
| ACAACAAAGGTTTAAAGTTG+GGG | 0.500211 | 1.4:-63501274 | MS.gene004948:CDS |
| TTTGTTATTGCAGATAAACT+AGG | 0.503996 | 1.4:-63499638 | MS.gene004948:intron |
| GAAAAGTAATAATGATTTGG+AGG | 0.511671 | 1.4:-63499597 | MS.gene004948:intron |
| ATATTGAAGATAATTGGAAT+AGG | 0.511959 | 1.4:-63500381 | MS.gene004948:intron |
| AGACAACAATAATTGCATCT+TGG | 0.512692 | 1.4:-63499148 | MS.gene004948:CDS |
| GATCCTGACATGCTCGAGGT+TGG | 0.514532 | 1.4:-63500049 | MS.gene004948:CDS |
| GGCAATTAGACTCATGGCTA+TGG | 0.519918 | 1.4:-63503997 | MS.gene004948:CDS |
| TAATTACCATTCCATCCTCC+AGG | 0.520204 | 1.4:+63500172 | None:intergenic |
| TAGCAGATTCAAACAACAGA+TGG | 0.520869 | 1.4:-63500210 | MS.gene004948:CDS |
| CTCTGAATCTCGATTGAGCT+CGG | 0.525537 | 1.4:+63501686 | None:intergenic |
| TTAAGGCTTCACTCATTGGC+GGG | 0.529204 | 1.4:+63500789 | None:intergenic |
| TACTGCAATAACTTCCGAGT+TGG | 0.529388 | 1.4:+63499767 | None:intergenic |
| GATGGGAAGACCCAGCAACA+TGG | 0.530363 | 1.4:-63500441 | MS.gene004948:CDS |
| GACATGCTCGAGGTTGGGAA+TGG | 0.535262 | 1.4:-63500043 | MS.gene004948:CDS |
| AAGGTCTAAGCCCTAAAGAA+AGG | 0.535262 | 1.4:-63500887 | MS.gene004948:intron |
| CACTATGGCAATTAGACTCA+TGG | 0.537430 | 1.4:-63504003 | None:intergenic |
| TATATGATGTAGGTTTGGGC+AGG | 0.538150 | 1.4:-63499224 | MS.gene004948:intron |
| CGTATGCTGGACCTGGAGGA+TGG | 0.538221 | 1.4:-63500183 | MS.gene004948:CDS |
| ATTAAGGCTTCACTCATTGG+CGG | 0.541238 | 1.4:+63500788 | None:intergenic |
| TGTTGATGCAAGAGATCTAT+GGG | 0.541350 | 1.4:-63499096 | MS.gene004948:CDS |
| GCCGATTATGTTCACAACAA+AGG | 0.545298 | 1.4:-63501287 | MS.gene004948:CDS |
| CAAAACAATGTCCAAGGAGA+AGG | 0.556898 | 1.4:-63503904 | MS.gene004948:CDS |
| ATGCTCGAGGTTGGGAATGG+AGG | 0.558815 | 1.4:-63500040 | MS.gene004948:CDS |
| TGGGCATCGTATGCTGGACC+TGG | 0.562058 | 1.4:-63500190 | MS.gene004948:CDS |
| TTCCACTTGAAACTAGCTCG+TGG | 0.562402 | 1.4:+63498906 | None:intergenic |
| TGGGGATCTACTCAGATGCT+GGG | 0.569882 | 1.4:-63501256 | MS.gene004948:intron |
| AAACGTATGCCTGGATCACT+GGG | 0.570234 | 1.4:-63501130 | MS.gene004948:CDS |
| TAAAGAGTAACTTACCCCAT+GGG | 0.574865 | 1.4:+63503837 | None:intergenic |
| TGGTTGTGATGTTCGTGCAA+TGG | 0.576876 | 1.4:-63499814 | MS.gene004948:CDS |
| CAACGGGACTTGCAAATTTG+GGG | 0.579180 | 1.4:-63502473 | MS.gene004948:CDS |
| AATTATCACAGCTGATGCAA+TGG | 0.587045 | 1.4:-63502499 | MS.gene004948:intron |
| AATACTGCAACATTTCCCTC+AGG | 0.594240 | 1.4:-63501323 | MS.gene004948:CDS |
| GCTGGACCTGGAGGATGGAA+TGG | 0.595925 | 1.4:-63500178 | MS.gene004948:intron |
| AGGTAACAAAACAATGTCCA+AGG | 0.598566 | 1.4:-63503910 | MS.gene004948:CDS |
| TCCACTTGAAACTAGCTCGT+GGG | 0.603078 | 1.4:+63498907 | None:intergenic |
| GGCTAAAGCCTTCATTCCTG+AGG | 0.608823 | 1.4:+63501307 | None:intergenic |
| AGCAGATTCAAACAACAGAT+GGG | 0.611632 | 1.4:-63500209 | MS.gene004948:CDS |
| CGAGCTCAATCGAGATTCAG+AGG | 0.612330 | 1.4:-63501685 | MS.gene004948:intron |
| AGGTCCTCTAAGTGAAAACA+AGG | 0.615653 | 1.4:-63499204 | MS.gene004948:CDS |
| TATGATAATTGTGAAAACAA+AGG | 0.625517 | 1.4:-63500906 | MS.gene004948:CDS |
| GCTAAAGCCTTCATTCCTGA+GGG | 0.630069 | 1.4:+63501308 | None:intergenic |
| AAGCCTTAATGAAATCTGGA+AGG | 0.632024 | 1.4:-63500775 | MS.gene004948:CDS |
| TAGATCTCTTGCATCAACAA+TGG | 0.642957 | 1.4:+63499100 | None:intergenic |
| GAAGTTATTGCAGTAAACCA+AGG | 0.645190 | 1.4:-63499759 | MS.gene004948:intron |
| AAAGAGTAACTTACCCCATG+GGG | 0.654754 | 1.4:+63503838 | None:intergenic |
| AGCATGAGAATCTATTTCAG+CGG | 0.658536 | 1.4:+63498951 | None:intergenic |
| ATATGAACTAATAACCAACT+CGG | 0.665369 | 1.4:-63499781 | MS.gene004948:CDS |
| ATTAGATCCTGACATGCTCG+AGG | 0.669556 | 1.4:-63500053 | MS.gene004948:intron |
| GCATCGTATGCTGGACCTGG+AGG | 0.696296 | 1.4:-63500187 | MS.gene004948:CDS |
| AAGAGTAACTTACCCCATGG+GGG | 0.697614 | 1.4:+63503839 | None:intergenic |
| AGAGTAACTTACCCCATGGG+GGG | 0.714241 | 1.4:+63503840 | None:intergenic |
| TGATGCAAGAGATCTATGGG+AGG | 0.758189 | 1.4:-63499093 | MS.gene004948:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAAAGTTTATATTGT+AGG | + | chr1.4:63501308-63501327 | None:intergenic | 10.0% |
| !! | AAGTATAAAATAATTAATGA+TGG | - | chr1.4:63499507-63499526 | MS.gene004948:intron | 10.0% |
| !! | CATATATTTATATTAAAATG+TGG | + | chr1.4:63500555-63500574 | None:intergenic | 10.0% |
| !! | TAATAAATTAAAAAGAGAAA+TGG | + | chr1.4:63499830-63499849 | None:intergenic | 10.0% |
| !! | TATCAATATATAAAAAAGAA+TGG | + | chr1.4:63502611-63502630 | None:intergenic | 10.0% |
| !!! | AAAATTTTCTTAATATAGAT+AGG | - | chr1.4:63503668-63503687 | MS.gene004948:intron | 10.0% |
| !! | AATAAGAAATGAAAAAAACA+AGG | + | chr1.4:63501006-63501025 | None:intergenic | 15.0% |
| !! | AATGGAATAATATTATTTAG+AGG | + | chr1.4:63502419-63502438 | None:intergenic | 15.0% |
| !! | CATATTAGTTCATTATTAAA+TGG | - | chr1.4:63499858-63499877 | MS.gene004948:intron | 15.0% |
| !! | GTCAAAAAATATATATTTGA+TGG | + | chr1.4:63500286-63500305 | None:intergenic | 15.0% |
| !! | TATAAAATAATTAATGATGG+TGG | - | chr1.4:63499510-63499529 | MS.gene004948:intron | 15.0% |
| !! | TGATTGAATATTACAAAATT+GGG | + | chr1.4:63499145-63499164 | None:intergenic | 15.0% |
| !! | TTAAATATAATCAAATGTGT+TGG | + | chr1.4:63503420-63503439 | None:intergenic | 15.0% |
| !! | TTGATTGAATATTACAAAAT+TGG | + | chr1.4:63499146-63499165 | None:intergenic | 15.0% |
| !!! | CTGATTTAAATTTTTCTTTA+GGG | - | chr1.4:63501972-63501991 | MS.gene004948:intron | 15.0% |
| !!! | TAAGAAACAATTAACTTTTT+TGG | + | chr1.4:63499693-63499712 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTTCATTTCTTAT+TGG | - | chr1.4:63501005-63501024 | MS.gene004948:intron | 15.0% |
| !!! | TTTTTGATTTTTCACTAAAT+TGG | - | chr1.4:63503044-63503063 | MS.gene004948:intron | 15.0% |
| !! | AAAATGATTTGATCACAATA+TGG | + | chr1.4:63502663-63502682 | None:intergenic | 20.0% |
| !! | ACTCTTTATTATCAATTTCT+TGG | - | chr1.4:63499095-63499114 | MS.gene004948:CDS | 20.0% |
| !! | AGTGAAAAGTAATAATGATT+TGG | - | chr1.4:63503317-63503336 | MS.gene004948:intron | 20.0% |
| !! | ATATTGAAGATAATTGGAAT+AGG | - | chr1.4:63502536-63502555 | MS.gene004948:intron | 20.0% |
| !! | ATCATGAAAATTATCATCAT+GGG | + | chr1.4:63500157-63500176 | None:intergenic | 20.0% |
| !! | ATCATTATCTTAATTTAGGT+AGG | - | chr1.4:63500468-63500487 | MS.gene004948:intron | 20.0% |
| !! | ATGAACTAAAGAACAATATA+AGG | + | chr1.4:63503870-63503889 | None:intergenic | 20.0% |
| !! | ATTTAAAGGAGAATAGAAAA+TGG | + | chr1.4:63502437-63502456 | None:intergenic | 20.0% |
| !! | CAATATTCTCTAAATTTCAA+TGG | + | chr1.4:63502816-63502835 | None:intergenic | 20.0% |
| !! | CATATTCATAACTATCTATT+TGG | - | chr1.4:63500668-63500687 | MS.gene004948:intron | 20.0% |
| !! | CCTAAAGAAAAATTTAAATC+AGG | + | chr1.4:63501974-63501993 | None:intergenic | 20.0% |
| !! | CTAACTAATTGAAAATGATA+GGG | - | chr1.4:63501558-63501577 | MS.gene004948:intron | 20.0% |
| !! | CTAGTAATTCAACAAAAAAA+GGG | - | chr1.4:63500829-63500848 | MS.gene004948:intron | 20.0% |
| !! | GAAATTGAGAAGTTATTAAA+TGG | + | chr1.4:63499461-63499480 | None:intergenic | 20.0% |
| !! | GTTCATTTAACAAAATACTA+TGG | + | chr1.4:63499725-63499744 | None:intergenic | 20.0% |
| !! | TAGTAATTCAACAAAAAAAG+GGG | - | chr1.4:63500830-63500849 | MS.gene004948:intron | 20.0% |
| !! | TATAAGATAAAGTTGAACAA+TGG | + | chr1.4:63499780-63499799 | None:intergenic | 20.0% |
| !! | TATCATGAAAATTATCATCA+TGG | + | chr1.4:63500158-63500177 | None:intergenic | 20.0% |
| !! | TATGATAATTGTGAAAACAA+AGG | - | chr1.4:63502011-63502030 | MS.gene004948:intron | 20.0% |
| !! | TCTAACTAATTGAAAATGAT+AGG | - | chr1.4:63501557-63501576 | MS.gene004948:intron | 20.0% |
| !! | TCTAGTAATTCAACAAAAAA+AGG | - | chr1.4:63500828-63500847 | MS.gene004948:intron | 20.0% |
| !! | TGATTAAATACCTTTCTTTA+GGG | + | chr1.4:63502043-63502062 | None:intergenic | 20.0% |
| !! | TTCTTGAGAACATATATATA+AGG | + | chr1.4:63503650-63503669 | None:intergenic | 20.0% |
| !! | TTGATTAAATACCTTTCTTT+AGG | + | chr1.4:63502044-63502063 | None:intergenic | 20.0% |
| !!! | AAATACTTTTGTGAAACATA+GGG | - | chr1.4:63502453-63502472 | MS.gene004948:intron | 20.0% |
| !!! | AAGAAAATGTATCCTTTTTT+AGG | + | chr1.4:63499965-63499984 | None:intergenic | 20.0% |
| !!! | ACTAACACTAAACTATTTTT+AGG | - | chr1.4:63503541-63503560 | MS.gene004948:intron | 20.0% |
| !!! | ATACAAACAATTTTGACTTT+AGG | + | chr1.4:63503617-63503636 | None:intergenic | 20.0% |
| !!! | ATCAAAAACAATTTGCTTAA+AGG | + | chr1.4:63503032-63503051 | None:intergenic | 20.0% |
| !!! | CCTGATTTAAATTTTTCTTT+AGG | - | chr1.4:63501971-63501990 | MS.gene004948:intron | 20.0% |
| !!! | GAAACATGCATATTTTTTTT+TGG | + | chr1.4:63501392-63501411 | None:intergenic | 20.0% |
| !!! | GATTATTGTATCTTTTTCAA+AGG | - | chr1.4:63501533-63501552 | MS.gene004948:intron | 20.0% |
| !!! | GTTAATTGTTTCTTATAACA+AGG | - | chr1.4:63499698-63499717 | MS.gene004948:intron | 20.0% |
| !!! | TAAAAAGCAACTCTTTTATT+AGG | + | chr1.4:63502780-63502799 | None:intergenic | 20.0% |
| !!! | TAAATACTTTTGTGAAACAT+AGG | - | chr1.4:63502452-63502471 | MS.gene004948:intron | 20.0% |
| !!! | TAAGAAACAATTGACTTTTT+AGG | - | chr1.4:63499607-63499626 | MS.gene004948:CDS | 20.0% |
| !!! | TACAAACAATTTTGACTTTA+GGG | + | chr1.4:63503616-63503635 | None:intergenic | 20.0% |
| !!! | TGTTTCACAAAAGTATTTAA+AGG | + | chr1.4:63502451-63502470 | None:intergenic | 20.0% |
| !!! | TTATGTGATTTGAATTTTCA+AGG | - | chr1.4:63500097-63500116 | MS.gene004948:intron | 20.0% |
| !!! | TTATTGGTTTAAATCATTGT+GGG | - | chr1.4:63502286-63502305 | MS.gene004948:intron | 20.0% |
| !!! | TTCTAAAAGATACTTAAGAA+AGG | - | chr1.4:63499991-63500010 | MS.gene004948:CDS | 20.0% |
| !!! | TTCTGTTTTTATTTATACCT+TGG | + | chr1.4:63503178-63503197 | None:intergenic | 20.0% |
| ! | AAAACCTATTTGCATTTGAA+GGG | + | chr1.4:63502069-63502088 | None:intergenic | 25.0% |
| ! | AAATCAAGGAATCAAAAACA+AGG | + | chr1.4:63503352-63503371 | None:intergenic | 25.0% |
| ! | AGACACATAAAATAGATAGT+GGG | + | chr1.4:63499539-63499558 | None:intergenic | 25.0% |
| ! | AGTAAATTAAATACGCAACT+TGG | + | chr1.4:63499570-63499589 | None:intergenic | 25.0% |
| ! | AGTTTATCTGCAATAACAAA+AGG | + | chr1.4:63503279-63503298 | None:intergenic | 25.0% |
| ! | ATATATAGTATGAATCTCTC+AGG | - | chr1.4:63500181-63500200 | MS.gene004948:CDS | 25.0% |
| ! | ATATGAACTAATAACCAACT+CGG | - | chr1.4:63503136-63503155 | MS.gene004948:intron | 25.0% |
| ! | GGGTATCATTATCTTAATTT+AGG | - | chr1.4:63500464-63500483 | MS.gene004948:intron | 25.0% |
| ! | GTAAGGAATATATGACAAAA+TGG | - | chr1.4:63502558-63502577 | MS.gene004948:intron | 25.0% |
| ! | TAAAACCTATTTGCATTTGA+AGG | + | chr1.4:63502070-63502089 | None:intergenic | 25.0% |
| ! | TAATTAACTATGTCTACAAC+TGG | - | chr1.4:63499187-63499206 | MS.gene004948:CDS | 25.0% |
| ! | TACTAGAATGATAAATGATC+AGG | + | chr1.4:63500815-63500834 | None:intergenic | 25.0% |
| ! | TAGACACATAAAATAGATAG+TGG | + | chr1.4:63499540-63499559 | None:intergenic | 25.0% |
| ! | TCAAAATACACTCCTAAAAA+AGG | - | chr1.4:63499950-63499969 | MS.gene004948:intron | 25.0% |
| ! | TGAATTACTAGAAAGACATA+AGG | - | chr1.4:63503202-63503221 | MS.gene004948:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr1.4:63501018-63501037 | MS.gene004948:intron | 25.0% |
| ! | TTGAAAATGATAGGGAAATA+TGG | - | chr1.4:63501566-63501585 | MS.gene004948:intron | 25.0% |
| !! | AATACTTTTGTGAAACATAG+GGG | - | chr1.4:63502454-63502473 | MS.gene004948:CDS | 25.0% |
| !! | AGATTAGTATGTCTAGAATT+TGG | + | chr1.4:63500377-63500396 | None:intergenic | 25.0% |
| !! | ATGAAGAAAGTACGTATTTA+CGG | - | chr1.4:63500869-63500888 | MS.gene004948:intron | 25.0% |
| !! | GAAAAGTAATAATGATTTGG+AGG | - | chr1.4:63503320-63503339 | MS.gene004948:intron | 25.0% |
| !! | TAAAGTTGAACAATGGTTTT+AGG | + | chr1.4:63499773-63499792 | None:intergenic | 25.0% |
| !! | TTGTTTCTTATAATAACGAC+CGG | + | chr1.4:63499597-63499616 | None:intergenic | 25.0% |
| !! | TTTCTTTTGTATACACTGAT+AGG | - | chr1.4:63503067-63503086 | MS.gene004948:intron | 25.0% |
| !!! | AAAGTTGAACAATGGTTTTA+GGG | + | chr1.4:63499772-63499791 | None:intergenic | 25.0% |
| !!! | AACCACTTTTTAACAACTTT+TGG | + | chr1.4:63501103-63501122 | None:intergenic | 25.0% |
| !!! | ATAAGCACTGAATACAATAA+TGG | + | chr1.4:63503491-63503510 | None:intergenic | 25.0% |
| !!! | CATGTACACATATTTTAGTT+GGG | + | chr1.4:63501711-63501730 | None:intergenic | 25.0% |
| !!! | CTTATTGGTTTAAATCATTG+TGG | - | chr1.4:63502285-63502304 | MS.gene004948:intron | 25.0% |
| !!! | TAGCAGTTATTTTATGGAAT+AGG | - | chr1.4:63503736-63503755 | MS.gene004948:intron | 25.0% |
| !!! | TCATGTACACATATTTTAGT+TGG | + | chr1.4:63501712-63501731 | None:intergenic | 25.0% |
| !!! | TTTGTTATTGCAGATAAACT+AGG | - | chr1.4:63503279-63503298 | MS.gene004948:intron | 25.0% |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr1.4:63501031-63501050 | MS.gene004948:intron | 30.0% | |
| AAAATTGAACCAACACAAAG+TGG | - | chr1.4:63502320-63502339 | MS.gene004948:intron | 30.0% | |
| AATTCCCTTCAAATGCAAAT+AGG | - | chr1.4:63502062-63502081 | MS.gene004948:intron | 30.0% | |
| ACTTCTCAATTTCTTCCATT+TGG | - | chr1.4:63499468-63499487 | MS.gene004948:intron | 30.0% | |
| AGACAACAATAATTGCATCT+TGG | - | chr1.4:63503769-63503788 | MS.gene004948:intron | 30.0% | |
| AGAGAAATGGTATAGAATGT+AGG | + | chr1.4:63499817-63499836 | None:intergenic | 30.0% | |
| AGGAGATATCTTGTTGAAAA+TGG | - | chr1.4:63499041-63499060 | MS.gene004948:intron | 30.0% | |
| ATACATTTGCAACATGAAGA+TGG | + | chr1.4:63501437-63501456 | None:intergenic | 30.0% | |
| ATCCTCTCTATTTATCCATT+TGG | - | chr1.4:63499230-63499249 | MS.gene004948:intron | 30.0% | |
| ATGCTAAAACATTTGCTTCT+TGG | - | chr1.4:63501824-63501843 | MS.gene004948:intron | 30.0% | |
| CAGGTGATATTGAAGATAAT+TGG | - | chr1.4:63502530-63502549 | MS.gene004948:intron | 30.0% | |
| CTAAAAAATAAGTGCAGAGT+TGG | + | chr1.4:63500938-63500957 | None:intergenic | 30.0% | |
| GAAGATAATTGGAATAGGTA+AGG | - | chr1.4:63502541-63502560 | MS.gene004948:intron | 30.0% | |
| GACACATAAAATAGATAGTG+GGG | + | chr1.4:63499538-63499557 | None:intergenic | 30.0% | |
| GTCCAAAAGTTGTTAAAAAG+TGG | - | chr1.4:63501098-63501117 | MS.gene004948:CDS | 30.0% | |
| GTTGGTTATTAGTTCATATG+TGG | + | chr1.4:63503135-63503154 | None:intergenic | 30.0% | |
| TACATTTGCAACATGAAGAT+GGG | + | chr1.4:63501436-63501455 | None:intergenic | 30.0% | |
| TAGATAGGTGTATATGATGT+AGG | - | chr1.4:63503683-63503702 | MS.gene004948:intron | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | + | chr1.4:63500980-63500999 | None:intergenic | 30.0% | |
| TCCTCTCTATTTATCCATTT+GGG | - | chr1.4:63499231-63499250 | MS.gene004948:intron | 30.0% | |
| TGCTAAAACATTTGCTTCTT+GGG | - | chr1.4:63501825-63501844 | MS.gene004948:intron | 30.0% | |
| ! | AAGCAACTCTTTTATTAGGA+AGG | + | chr1.4:63502776-63502795 | None:intergenic | 30.0% |
| ! | ACAACAAAGGTTTAAAGTTG+GGG | - | chr1.4:63501643-63501662 | MS.gene004948:intron | 30.0% |
| ! | ACCTTTGTTGTGAACATAAT+CGG | + | chr1.4:63501634-63501653 | None:intergenic | 30.0% |
| ! | ATAATCAAATGTGTTGGTGT+CGG | + | chr1.4:63503414-63503433 | None:intergenic | 30.0% |
| ! | CACAACAAAGGTTTAAAGTT+GGG | - | chr1.4:63501642-63501661 | MS.gene004948:intron | 30.0% |
| ! | TATCTTGTTGAAAATGGACT+TGG | - | chr1.4:63499047-63499066 | MS.gene004948:intron | 30.0% |
| ! | TCACAACAAAGGTTTAAAGT+TGG | - | chr1.4:63501641-63501660 | MS.gene004948:intron | 30.0% |
| ! | TCTAACACTCACTCTTTTAT+TGG | + | chr1.4:63502366-63502385 | None:intergenic | 30.0% |
| ! | TTAGTATGTCTAGAATTTGG+AGG | + | chr1.4:63500374-63500393 | None:intergenic | 30.0% |
| !! | ACAAGGTAGCAGTTATTTTA+TGG | - | chr1.4:63503730-63503749 | MS.gene004948:intron | 30.0% |
| !! | ATTTCATTTGGTGTCAATTC+CGG | - | chr1.4:63499313-63499332 | MS.gene004948:intron | 30.0% |
| !! | CAAAAAGTGTTGGAAATAGT+TGG | - | chr1.4:63502500-63502519 | MS.gene004948:intron | 30.0% |
| !!! | CTAGAACTTTTTCATATTGC+AGG | - | chr1.4:63500716-63500735 | MS.gene004948:intron | 30.0% |
| !!! | GAATGTAGGTTTTAGAACAA+CGG | + | chr1.4:63499803-63499822 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCAGACGATTGTT+GGG | - | chr1.4:63501208-63501227 | MS.gene004948:intron | 30.0% |
| !!! | TTTTTTTTCCAGACGATTGT+TGG | - | chr1.4:63501207-63501226 | MS.gene004948:intron | 30.0% |
| AAGCCTTAATGAAATCTGGA+AGG | - | chr1.4:63502142-63502161 | MS.gene004948:intron | 35.0% | |
| AATTATCACAGCTGATGCAA+TGG | - | chr1.4:63500418-63500437 | MS.gene004948:CDS | 35.0% | |
| ACACTATCCCTACCATATTA+TGG | - | chr1.4:63503375-63503394 | MS.gene004948:intron | 35.0% | |
| ACATCACAACCAACCAATAA+AGG | + | chr1.4:63503095-63503114 | None:intergenic | 35.0% | |
| ACATGTGCCATAATATGGTA+GGG | + | chr1.4:63503385-63503404 | None:intergenic | 35.0% | |
| AGCAGATTCAAACAACAGAT+GGG | - | chr1.4:63502708-63502727 | MS.gene004948:CDS | 35.0% | |
| AGCATGAGAATCTATTTCAG+CGG | + | chr1.4:63503969-63503988 | None:intergenic | 35.0% | |
| AGCTTTGCTCTGACTTTAAA+TGG | - | chr1.4:63499351-63499370 | MS.gene004948:intron | 35.0% | |
| AGGGATAGTGTATGAAATCA+AGG | + | chr1.4:63503366-63503385 | None:intergenic | 35.0% | |
| AGGTAACAAAACAATGTCCA+AGG | - | chr1.4:63499007-63499026 | MS.gene004948:intron | 35.0% | |
| AGGTGTATATGATGTAGGTT+TGG | - | chr1.4:63503688-63503707 | MS.gene004948:intron | 35.0% | |
| AGTGAAGCCTTAATGAAATC+TGG | - | chr1.4:63502138-63502157 | MS.gene004948:intron | 35.0% | |
| ATAAAGAGTAACTTACCCCA+TGG | + | chr1.4:63499084-63499103 | None:intergenic | 35.0% | |
| ATCACAACACTAGAAGTCAA+GGG | + | chr1.4:63502987-63503006 | None:intergenic | 35.0% | |
| ATTGCATCTTGGTCTGATAT+AGG | - | chr1.4:63503780-63503799 | MS.gene004948:intron | 35.0% | |
| ATTTCTTCCATTTGGACACA+AGG | - | chr1.4:63499476-63499495 | MS.gene004948:intron | 35.0% | |
| CATTGACATGTGCCATAATA+TGG | + | chr1.4:63503390-63503409 | None:intergenic | 35.0% | |
| CCTCTCTATTTATCCATTTG+GGG | - | chr1.4:63499232-63499251 | MS.gene004948:intron | 35.0% | |
| GAAGTTATTGCAGTAAACCA+AGG | - | chr1.4:63503158-63503177 | MS.gene004948:intron | 35.0% | |
| GCTTTGCTCTGACTTTAAAT+GGG | - | chr1.4:63499352-63499371 | MS.gene004948:intron | 35.0% | |
| GGTGTATATGATGTAGGTTT+GGG | - | chr1.4:63503689-63503708 | MS.gene004948:intron | 35.0% | |
| GTCTCATGTTCGATTTCATT+TGG | - | chr1.4:63499301-63499320 | MS.gene004948:intron | 35.0% | |
| TAAAGAGTAACTTACCCCAT+GGG | + | chr1.4:63499083-63499102 | None:intergenic | 35.0% | |
| TAGATCTCTTGCATCAACAA+TGG | + | chr1.4:63503820-63503839 | None:intergenic | 35.0% | |
| TAGCAGATTCAAACAACAGA+TGG | - | chr1.4:63502707-63502726 | MS.gene004948:CDS | 35.0% | |
| TATAGTATGAATCTCTCAGG+TGG | - | chr1.4:63500184-63500203 | MS.gene004948:CDS | 35.0% | |
| TCGTTCTCATTTCAGCATAT+GGG | - | chr1.4:63502918-63502937 | MS.gene004948:intron | 35.0% | |
| TCTGATACTCACTCTCTTAT+TGG | - | chr1.4:63502270-63502289 | MS.gene004948:intron | 35.0% | |
| TCTTCTTCTCAATGTGTGAA+TGG | - | chr1.4:63502169-63502188 | MS.gene004948:intron | 35.0% | |
| TGACCTTCCAGATTTCATTA+AGG | + | chr1.4:63502148-63502167 | None:intergenic | 35.0% | |
| TGTTGATGCAAGAGATCTAT+GGG | - | chr1.4:63503821-63503840 | MS.gene004948:intron | 35.0% | |
| TTCATTAAGGCTTCACTCAT+TGG | + | chr1.4:63502135-63502154 | None:intergenic | 35.0% | |
| TTCTTATAATAACGACCGGA+GGG | + | chr1.4:63499593-63499612 | None:intergenic | 35.0% | |
| TTGTTGATGCAAGAGATCTA+TGG | - | chr1.4:63503820-63503839 | MS.gene004948:intron | 35.0% | |
| TTTCAAACCTTGTGTCCAAA+TGG | + | chr1.4:63499486-63499505 | None:intergenic | 35.0% | |
| TTTCTTATAATAACGACCGG+AGG | + | chr1.4:63499594-63499613 | None:intergenic | 35.0% | |
| ! | CGTATTTAATTTACTCCCTC+CGG | - | chr1.4:63499575-63499594 | MS.gene004948:intron | 35.0% |
| ! | CGTCATACATTTTGCCAAAT+AGG | - | chr1.4:63502103-63502122 | MS.gene004948:intron | 35.0% |
| ! | GAAAGTATAGTTCGTGAAAC+AGG | - | chr1.4:63500240-63500259 | MS.gene004948:intron | 35.0% |
| ! | TCTATTTATCCATTTGGGGT+TGG | - | chr1.4:63499236-63499255 | MS.gene004948:intron | 35.0% |
| ! | TTTTGTGAAACATAGGGGAT+GGG | - | chr1.4:63502459-63502478 | MS.gene004948:CDS | 35.0% |
| !!! | GAGTTGCTTTTTACATGTGA+TGG | - | chr1.4:63502787-63502806 | MS.gene004948:intron | 35.0% |
| AAAACTCAGTATCCGATCCA+GGG | + | chr1.4:63499425-63499444 | None:intergenic | 40.0% | |
| AAAGAGTAACTTACCCCATG+GGG | + | chr1.4:63499082-63499101 | None:intergenic | 40.0% | |
| AAAGTCAGAGCAAAGCTCTA+TGG | + | chr1.4:63499348-63499367 | None:intergenic | 40.0% | |
| AACATTTCCCTCAGGAATGA+AGG | - | chr1.4:63501602-63501621 | MS.gene004948:intron | 40.0% | |
| AAGGTCTAAGCCCTAAAGAA+AGG | - | chr1.4:63502030-63502049 | MS.gene004948:intron | 40.0% | |
| AATAAGCGAGCATCTGTTGA+TGG | + | chr1.4:63498987-63499006 | None:intergenic | 40.0% | |
| AATACTGCAACATTTCCCTC+AGG | - | chr1.4:63501594-63501613 | MS.gene004948:intron | 40.0% | |
| ACACTGATAGGCTCCTTTAT+TGG | - | chr1.4:63503079-63503098 | MS.gene004948:intron | 40.0% | |
| ACTTGTAGTAAACGTATGCC+TGG | - | chr1.4:63501778-63501797 | MS.gene004948:intron | 40.0% | |
| AGGGTTGTTACGTAAGAGTA+AGG | + | chr1.4:63499753-63499772 | None:intergenic | 40.0% | |
| AGGTCCTCTAAGTGAAAACA+AGG | - | chr1.4:63503713-63503732 | MS.gene004948:intron | 40.0% | |
| ATTAAGGCTTCACTCATTGG+CGG | + | chr1.4:63502132-63502151 | None:intergenic | 40.0% | |
| ATTGAACCAACACAAAGTGG+TGG | - | chr1.4:63502323-63502342 | MS.gene004948:intron | 40.0% | |
| CAAAACAATGTCCAAGGAGA+AGG | - | chr1.4:63499013-63499032 | MS.gene004948:intron | 40.0% | |
| CATCACAACACTAGAAGTCA+AGG | + | chr1.4:63502988-63503007 | None:intergenic | 40.0% | |
| CCCCAAATGGATAAATAGAG+AGG | + | chr1.4:63499235-63499254 | None:intergenic | 40.0% | |
| CTGCTATAGAAGTCATGCTA+GGG | + | chr1.4:63502693-63502712 | None:intergenic | 40.0% | |
| CTTGACTTCTAGTGTTGTGA+TGG | - | chr1.4:63502986-63503005 | MS.gene004948:intron | 40.0% | |
| GACATGTGCCATAATATGGT+AGG | + | chr1.4:63503386-63503405 | None:intergenic | 40.0% | |
| GAGGGAAATGTTGCAGTATT+GGG | + | chr1.4:63501594-63501613 | None:intergenic | 40.0% | |
| GCAGATAAACTAGGAGTTCA+AGG | - | chr1.4:63503288-63503307 | MS.gene004948:intron | 40.0% | |
| GCCGATTATGTTCACAACAA+AGG | - | chr1.4:63501630-63501649 | MS.gene004948:intron | 40.0% | |
| GGAAATAGTTGGAGAACAAC+AGG | - | chr1.4:63502511-63502530 | MS.gene004948:intron | 40.0% | |
| GGGTGCAATATTAGACTAGA+TGG | + | chr1.4:63499125-63499144 | None:intergenic | 40.0% | |
| GTATATCCACCACTTTGTGT+TGG | + | chr1.4:63502332-63502351 | None:intergenic | 40.0% | |
| TAAAACTCAGTATCCGATCC+AGG | + | chr1.4:63499426-63499445 | None:intergenic | 40.0% | |
| TAATTACCATTCCATCCTCC+AGG | + | chr1.4:63502748-63502767 | None:intergenic | 40.0% | |
| TACTGCAATAACTTCCGAGT+TGG | + | chr1.4:63503153-63503172 | None:intergenic | 40.0% | |
| TATATGATGTAGGTTTGGGC+AGG | - | chr1.4:63503693-63503712 | MS.gene004948:intron | 40.0% | |
| TCAACAGATGCTCGCTTATT+AGG | - | chr1.4:63498987-63499006 | MS.gene004948:CDS | 40.0% | |
| TCAACGGGACTTGCAAATTT+GGG | - | chr1.4:63500443-63500462 | MS.gene004948:CDS | 40.0% | |
| TCTCCTAATTACCTTCTCCT+TGG | + | chr1.4:63499027-63499046 | None:intergenic | 40.0% | |
| TCTGCTATAGAAGTCATGCT+AGG | + | chr1.4:63502694-63502713 | None:intergenic | 40.0% | |
| TGAGGGAAATGTTGCAGTAT+TGG | + | chr1.4:63501595-63501614 | None:intergenic | 40.0% | |
| TGATAGGCTCCTTTATTGGT+TGG | - | chr1.4:63503083-63503102 | MS.gene004948:intron | 40.0% | |
| TGTCCAAGGAGAAGGTAATT+AGG | - | chr1.4:63499021-63499040 | MS.gene004948:intron | 40.0% | |
| ! | CTTTTGTGAAACATAGGGGA+TGG | - | chr1.4:63502458-63502477 | MS.gene004948:CDS | 40.0% |
| ! | GAGTGTTCAAAAGAGAGTGT+TGG | + | chr1.4:63502248-63502267 | None:intergenic | 40.0% |
| ! | GGAGTAGCTGGAATCATTTT+GGG | - | chr1.4:63500205-63500224 | MS.gene004948:CDS | 40.0% |
| ! | TGGAGTAGCTGGAATCATTT+TGG | - | chr1.4:63500204-63500223 | MS.gene004948:CDS | 40.0% |
| !!! | GCTACCTTGTTTTCACTTAG+AGG | + | chr1.4:63503720-63503739 | None:intergenic | 40.0% |
| AAACGTATGCCTGGATCACT+GGG | - | chr1.4:63501787-63501806 | MS.gene004948:intron | 45.0% | |
| AAGAGTAACTTACCCCATGG+GGG | + | chr1.4:63499081-63499100 | None:intergenic | 45.0% | |
| AAGATCCCAAACCAACCACT+AGG | + | chr1.4:63499262-63499281 | None:intergenic | 45.0% | |
| ATTAGATCCTGACATGCTCG+AGG | - | chr1.4:63502864-63502883 | MS.gene004948:intron | 45.0% | |
| CAACGGGACTTGCAAATTTG+GGG | - | chr1.4:63500444-63500463 | MS.gene004948:CDS | 45.0% | |
| CTATAGAAGTCATGCTAGGG+AGG | + | chr1.4:63502690-63502709 | None:intergenic | 45.0% | |
| CTCTGAATCTCGATTGAGCT+CGG | + | chr1.4:63501234-63501253 | None:intergenic | 45.0% | |
| CTTGCATCAACAATGGCTTC+TGG | + | chr1.4:63503813-63503832 | None:intergenic | 45.0% | |
| GCTAAAGCCTTCATTCCTGA+GGG | + | chr1.4:63501612-63501631 | None:intergenic | 45.0% | |
| GGCAATTAGACTCATGGCTA+TGG | - | chr1.4:63498920-63498939 | MS.gene004948:CDS | 45.0% | |
| GTCAACGGGACTTGCAAATT+TGG | - | chr1.4:63500442-63500461 | MS.gene004948:CDS | 45.0% | |
| TAAACGTATGCCTGGATCAC+TGG | - | chr1.4:63501786-63501805 | MS.gene004948:intron | 45.0% | |
| TGATGCAAGAGATCTATGGG+AGG | - | chr1.4:63503824-63503843 | MS.gene004948:intron | 45.0% | |
| TGGTTGTGATGTTCGTGCAA+TGG | - | chr1.4:63503103-63503122 | MS.gene004948:intron | 45.0% | |
| TTAAGGCTTCACTCATTGGC+GGG | + | chr1.4:63502131-63502150 | None:intergenic | 45.0% | |
| ! | AGCTGATGCAATGGTGTCAA+CGG | - | chr1.4:63500427-63500446 | MS.gene004948:CDS | 45.0% |
| ! | CAGCATATGGGCTTTAGCTA+AGG | - | chr1.4:63502930-63502949 | MS.gene004948:intron | 45.0% |
| ! | GCAACATGGGCAAAAAGTGT+TGG | - | chr1.4:63502490-63502509 | MS.gene004948:CDS | 45.0% |
| !! | ACACTTTTTGCCCATGTTGC+TGG | + | chr1.4:63502490-63502509 | None:intergenic | 45.0% |
| !! | CACTTTTTGCCCATGTTGCT+GGG | + | chr1.4:63502489-63502508 | None:intergenic | 45.0% |
| !! | TAGTGGTTGGTTTGGGATCT+TGG | - | chr1.4:63499261-63499280 | MS.gene004948:intron | 45.0% |
| !! | TCATTTGGTGTCAATTCCGG+TGG | - | chr1.4:63499316-63499335 | MS.gene004948:intron | 45.0% |
| AAATGGGTCCCCTGCAAAGT+GGG | - | chr1.4:63499368-63499387 | MS.gene004948:intron | 50.0% | |
| AATCTCACTGCCCACTTTGC+AGG | + | chr1.4:63499381-63499400 | None:intergenic | 50.0% | |
| AATCTCTCAGGTGGAGTAGC+TGG | - | chr1.4:63500193-63500212 | MS.gene004948:CDS | 50.0% | |
| AGAGTAACTTACCCCATGGG+GGG | + | chr1.4:63499080-63499099 | None:intergenic | 50.0% | |
| AGCTCTATGGACTTGTCCAC+CGG | + | chr1.4:63499335-63499354 | None:intergenic | 50.0% | |
| ATCCTGACATGCTCGAGGTT+GGG | - | chr1.4:63502869-63502888 | MS.gene004948:intron | 50.0% | |
| ATCTCACTGCCCACTTTGCA+GGG | + | chr1.4:63499380-63499399 | None:intergenic | 50.0% | |
| ATGGGAAGACCCAGCAACAT+GGG | - | chr1.4:63502477-63502496 | MS.gene004948:CDS | 50.0% | |
| CGAGCTCAATCGAGATTCAG+AGG | - | chr1.4:63501232-63501251 | MS.gene004948:intron | 50.0% | |
| GGCAGTGAGATTGATCCTCT+CGG | - | chr1.4:63499389-63499408 | MS.gene004948:intron | 50.0% | |
| GGCTAAAGCCTTCATTCCTG+AGG | + | chr1.4:63501613-63501632 | None:intergenic | 50.0% | |
| TAAATGGGTCCCCTGCAAAG+TGG | - | chr1.4:63499367-63499386 | MS.gene004948:intron | 50.0% | |
| TCTTCATGTCCCAGTGATCC+AGG | + | chr1.4:63501799-63501818 | None:intergenic | 50.0% | |
| TGGGGATCTACTCAGATGCT+GGG | - | chr1.4:63501661-63501680 | MS.gene004948:intron | 50.0% | |
| TTGGGGATCTACTCAGATGC+TGG | - | chr1.4:63501660-63501679 | MS.gene004948:intron | 50.0% | |
| ! | AACAGATGGGCATCGTATGC+TGG | - | chr1.4:63502721-63502740 | MS.gene004948:intron | 50.0% |
| ! | CTCATTGGCGGGTACCTATT+TGG | + | chr1.4:63502120-63502139 | None:intergenic | 50.0% |
| ! | GCTGATGCAATGGTGTCAAC+GGG | - | chr1.4:63500428-63500447 | MS.gene004948:CDS | 50.0% |
| !! | GGATTAGTCAGTCCCTGGAT+CGG | - | chr1.4:63499410-63499429 | MS.gene004948:intron | 50.0% |
| !! | GTTGGCCTAGTGGTTGGTTT+GGG | - | chr1.4:63499254-63499273 | MS.gene004948:intron | 50.0% |
| ACCACTAGGCCAACCCCAAA+TGG | + | chr1.4:63499248-63499267 | None:intergenic | 55.0% | |
| ATGCTCGAGGTTGGGAATGG+AGG | - | chr1.4:63502877-63502896 | MS.gene004948:intron | 55.0% | |
| CAGGGACTGACTAATCCGAG+AGG | + | chr1.4:63499407-63499426 | None:intergenic | 55.0% | |
| CTTGGAGTGTGCTCGTCTCA+AGG | - | chr1.4:63499279-63499298 | MS.gene004948:intron | 55.0% | |
| GACATGCTCGAGGTTGGGAA+TGG | - | chr1.4:63502874-63502893 | MS.gene004948:intron | 55.0% | |
| GATCCTGACATGCTCGAGGT+TGG | - | chr1.4:63502868-63502887 | MS.gene004948:intron | 55.0% | |
| GATGGGAAGACCCAGCAACA+TGG | - | chr1.4:63502476-63502495 | MS.gene004948:CDS | 55.0% | |
| TCTCACTGCCCACTTTGCAG+GGG | + | chr1.4:63499379-63499398 | None:intergenic | 55.0% | |
| TTCCCAACCTCGAGCATGTC+AGG | + | chr1.4:63502874-63502893 | None:intergenic | 55.0% | |
| ! | ACTTGGTTTGACACCCCCCA+TGG | - | chr1.4:63499064-63499083 | MS.gene004948:intron | 55.0% |
| ! | CTTGGTTTGACACCCCCCAT+GGG | - | chr1.4:63499065-63499084 | MS.gene004948:intron | 55.0% |
| ! | TTGGTTTGACACCCCCCATG+GGG | - | chr1.4:63499066-63499085 | MS.gene004948:intron | 55.0% |
| !! | CTCTCGGATTAGTCAGTCCC+TGG | - | chr1.4:63499405-63499424 | MS.gene004948:intron | 55.0% |
| !! | GGTTGGCCTAGTGGTTGGTT+TGG | - | chr1.4:63499253-63499272 | MS.gene004948:intron | 55.0% |
| !! | TCCATTTGGGGTTGGCCTAG+TGG | - | chr1.4:63499244-63499263 | MS.gene004948:intron | 55.0% |
| !! | TTTGGGGTTGGCCTAGTGGT+TGG | - | chr1.4:63499248-63499267 | MS.gene004948:intron | 55.0% |
| AGCTCGGCCCAACAATCGTC+TGG | + | chr1.4:63501218-63501237 | None:intergenic | 60.0% | |
| CGTATGCTGGACCTGGAGGA+TGG | - | chr1.4:63502734-63502753 | MS.gene004948:intron | 60.0% | |
| GCATCGTATGCTGGACCTGG+AGG | - | chr1.4:63502730-63502749 | MS.gene004948:intron | 60.0% | |
| GCTGGACCTGGAGGATGGAA+TGG | - | chr1.4:63502739-63502758 | MS.gene004948:intron | 60.0% | |
| ! | TGGGCATCGTATGCTGGACC+TGG | - | chr1.4:63502727-63502746 | MS.gene004948:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 63498918 | 63504021 | 63498918 | ID=MS.gene004948 |
| chr1.4 | mRNA | 63498918 | 63504021 | 63498918 | ID=MS.gene004948.t1;Parent=MS.gene004948 |
| chr1.4 | exon | 63503852 | 63504021 | 63503852 | ID=MS.gene004948.t1.exon1;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63503852 | 63504021 | 63503852 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63502678 | 63502736 | 63502678 | ID=MS.gene004948.t1.exon2;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63502678 | 63502736 | 63502678 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63502454 | 63502510 | 63502454 | ID=MS.gene004948.t1.exon3;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63502454 | 63502510 | 63502454 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63501686 | 63501720 | 63501686 | ID=MS.gene004948.t1.exon4;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63501686 | 63501720 | 63501686 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63501257 | 63501360 | 63501257 | ID=MS.gene004948.t1.exon5;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63501257 | 63501360 | 63501257 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63501093 | 63501168 | 63501093 | ID=MS.gene004948.t1.exon6;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63501093 | 63501168 | 63501093 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63500888 | 63500946 | 63500888 | ID=MS.gene004948.t1.exon7;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63500888 | 63500946 | 63500888 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63500749 | 63500814 | 63500749 | ID=MS.gene004948.t1.exon8;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63500749 | 63500814 | 63500749 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63500382 | 63500465 | 63500382 | ID=MS.gene004948.t1.exon9;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63500382 | 63500465 | 63500382 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63500179 | 63500243 | 63500179 | ID=MS.gene004948.t1.exon10;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63500179 | 63500243 | 63500179 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63499988 | 63500070 | 63499988 | ID=MS.gene004948.t1.exon11;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63499988 | 63500070 | 63499988 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63499760 | 63499850 | 63499760 | ID=MS.gene004948.t1.exon12;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63499760 | 63499850 | 63499760 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63499598 | 63499647 | 63499598 | ID=MS.gene004948.t1.exon13;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63499598 | 63499647 | 63499598 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63499094 | 63499234 | 63499094 | ID=MS.gene004948.t1.exon14;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63499094 | 63499234 | 63499094 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| chr1.4 | exon | 63498918 | 63499007 | 63498918 | ID=MS.gene004948.t1.exon15;Parent=MS.gene004948.t1 |
| chr1.4 | CDS | 63498918 | 63499007 | 63498918 | ID=cds.MS.gene004948.t1;Parent=MS.gene004948.t1 |
| Gene Sequence |
| Protein sequence |
