Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006697.t1 | XP_003607599.1 | 100 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 9.90E-67 | 262.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006697.t1 | Q9LXT3 | 84.5 | 142 | 22 | 0 | 1 | 142 | 1 | 142 | 5.0e-59 | 228.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006697.t1 | B7FGN1 | 100.0 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 7.2e-67 | 262.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene006697.t1 | TR | MBF1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006697 | MS.gene94585 | PPI |
| MS.gene006697 | MS.gene61422 | PPI |
| MS.gene006697 | MS.gene51432 | PPI |
| MS.gene05524 | MS.gene006697 | PPI |
| MS.gene91241 | MS.gene006697 | PPI |
| MS.gene006697 | MS.gene073154 | PPI |
| MS.gene006697 | MS.gene73865 | PPI |
| MS.gene006697 | MS.gene35285 | PPI |
| MS.gene045483 | MS.gene006697 | PPI |
| MS.gene006697 | MS.gene042957 | PPI |
| MS.gene006697 | MS.gene052439 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006697.t1 | MTR_4g080090 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 6.96e-101 | 285 |
| MS.gene006697.t1 | MTR_2g084220 | 91.304 | 138 | 12 | 0 | 5 | 142 | 3 | 140 | 3.37e-89 | 256 |
| MS.gene006697.t1 | MTR_6g018330 | 68.085 | 141 | 29 | 1 | 2 | 142 | 19 | 143 | 2.10e-58 | 178 |
| MS.gene006697.t1 | MTR_6g086280 | 52.174 | 138 | 66 | 0 | 4 | 141 | 9 | 146 | 2.07e-45 | 145 |
| MS.gene006697.t1 | MTR_6g086280 | 52.174 | 138 | 66 | 0 | 4 | 141 | 9 | 146 | 2.53e-45 | 145 |
| MS.gene006697.t1 | MTR_1g047000 | 90.244 | 41 | 4 | 0 | 102 | 142 | 16 | 56 | 6.14e-20 | 77.8 |
| MS.gene006697.t1 | MTR_7g117675 | 90.000 | 40 | 4 | 0 | 92 | 131 | 1 | 40 | 7.61e-19 | 75.5 |
| MS.gene006697.t1 | MTR_4g103930 | 55.844 | 77 | 21 | 1 | 32 | 95 | 45 | 121 | 7.74e-18 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006697.t1 | AT3G58680 | 84.507 | 142 | 22 | 0 | 1 | 142 | 1 | 142 | 1.27e-86 | 249 |
| MS.gene006697.t1 | AT2G42680 | 85.915 | 142 | 20 | 0 | 1 | 142 | 1 | 142 | 1.70e-86 | 249 |
| MS.gene006697.t1 | AT3G24500 | 50.360 | 139 | 67 | 1 | 5 | 141 | 7 | 145 | 1.05e-43 | 141 |
| MS.gene006697.t1 | AT3G24500 | 43.820 | 89 | 48 | 1 | 5 | 91 | 7 | 95 | 4.69e-17 | 71.6 |
Find 38 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACGGCTTTCTCATCTTTCT+TGG | 0.250063 | 4.1:+26207537 | None:intergenic |
| ATCTTTCTTGGCGGCGGCGT+TGG | 0.250269 | 4.1:+26207549 | None:intergenic |
| TTGCTAATTATCTGCTGGTT+TGG | 0.292459 | 4.1:+26205365 | None:intergenic |
| GTTCCCAATCTTGAGAAATA+TGG | 0.320777 | 4.1:+26207596 | None:intergenic |
| TTTCTTGACGGTATCGATAT+CGG | 0.338092 | 4.1:+26207492 | None:intergenic |
| TCTTTCTTGGCGGCGGCGTT+GGG | 0.340591 | 4.1:+26207550 | None:intergenic |
| GGCACGGCGAGCGGCGTTGA+CGG | 0.351560 | 4.1:+26207519 | None:intergenic |
| GTCAACGCCGCTCGCCGTGC+CGG | 0.353656 | 4.1:-26207517 | MS.gene006697:CDS |
| TAGGCCATATTTCTCAAGAT+TGG | 0.393130 | 4.1:-26207600 | MS.gene006697:CDS |
| AGCAAGTTGGAGAGAGCCCT+TGG | 0.404653 | 4.1:-26205347 | MS.gene006697:CDS |
| CCAACTTGCTAATTATCTGC+TGG | 0.425113 | 4.1:+26205360 | None:intergenic |
| GTGATCCAAGAGTACGAGTC+AGG | 0.425391 | 4.1:-26205398 | MS.gene006697:CDS |
| CTTTCCCTGACTCGTACTCT+TGG | 0.428066 | 4.1:+26205393 | None:intergenic |
| AGGCCATATTTCTCAAGATT+GGG | 0.431239 | 4.1:-26207599 | MS.gene006697:CDS |
| ATCGGCGCCGGCACGGCGAG+CGG | 0.444792 | 4.1:+26207510 | None:intergenic |
| GCTTTCTTGCGGATGACGAC+TGG | 0.447489 | 4.1:+26207574 | None:intergenic |
| AATTATCTGCTGGTTTGGAA+TGG | 0.474147 | 4.1:+26205370 | None:intergenic |
| GAGATAAACATGTCAGGTCT+AGG | 0.474885 | 4.1:-26207619 | None:intergenic |
| GCACTTCATTGAACACTAAG+AGG | 0.487095 | 4.1:-26207151 | MS.gene006697:CDS |
| GGCTATAATGCAAGCTAGGA+TGG | 0.493126 | 4.1:-26205560 | MS.gene006697:CDS |
| TTCATTGAACACTAAGAGGC+TGG | 0.503842 | 4.1:-26207147 | MS.gene006697:CDS |
| TGCCACGCAGTTTAGCTCCA+AGG | 0.505877 | 4.1:+26205330 | None:intergenic |
| CCAGCAGATAATTAGCAAGT+TGG | 0.509376 | 4.1:-26205360 | MS.gene006697:CDS |
| AACAAAGAGATAAACATGTC+AGG | 0.512918 | 4.1:-26207625 | None:intergenic |
| ATAGCCTTCTTCAGTTCAGT+TGG | 0.514235 | 4.1:+26205577 | None:intergenic |
| GAGGAGCGAACGTTTCTTGA+CGG | 0.526730 | 4.1:+26207480 | None:intergenic |
| CGGCGTTGGGAGCTTTCTTG+CGG | 0.528475 | 4.1:+26207563 | None:intergenic |
| AGAAGGCTATAATGCAAGCT+AGG | 0.528617 | 4.1:-26205564 | MS.gene006697:CDS |
| GCCACGCAGTTTAGCTCCAA+GGG | 0.531362 | 4.1:+26205331 | None:intergenic |
| GGCTTTCTCATCTTTCTTGG+CGG | 0.532271 | 4.1:+26207540 | None:intergenic |
| TGTACCAACTGAACTGAAGA+AGG | 0.543790 | 4.1:-26205581 | MS.gene006697:CDS |
| GAACACTAAGAGGCTGGATG+AGG | 0.556069 | 4.1:-26207141 | MS.gene006697:CDS |
| GACGGTATCGATATCGGCGC+CGG | 0.571328 | 4.1:+26207498 | None:intergenic |
| TTTCTCATCTTTCTTGGCGG+CGG | 0.585231 | 4.1:+26207543 | None:intergenic |
| TCGTACTCTTGGATCACTTG+AGG | 0.598699 | 4.1:+26205404 | None:intergenic |
| TGATCCAAGAGTACGAGTCA+GGG | 0.620671 | 4.1:-26205397 | MS.gene006697:CDS |
| TATCGATATCGGCGCCGGCA+CGG | 0.624694 | 4.1:+26207503 | None:intergenic |
| GCCCTTGGAGCTAAACTGCG+TGG | 0.653713 | 4.1:-26205332 | MS.gene006697:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACATTAATTAATTAGTTT+TGG | + | chr4.1:26205481-26205500 | None:intergenic | 10.0% |
| !!! | AACATTAATTAATTAGTTTT+GGG | + | chr4.1:26205480-26205499 | None:intergenic | 10.0% |
| !! | TAATTTCAATATATTGATCA+TGG | - | chr4.1:26205670-26205689 | MS.gene006697:intron | 15.0% |
| !! | TTCAAATTATATAATCTGAT+GGG | + | chr4.1:26206823-26206842 | None:intergenic | 15.0% |
| !! | TTTCAAATTATATAATCTGA+TGG | + | chr4.1:26206824-26206843 | None:intergenic | 15.0% |
| !!! | TTAATGTTTTTTTTAACTCT+TGG | - | chr4.1:26205492-26205511 | MS.gene006697:intron | 15.0% |
| !!! | TTCGTAGATAAAAATAATTT+TGG | - | chr4.1:26205605-26205624 | MS.gene006697:intron | 15.0% |
| !!! | TTGATGATTATTTTGTATTA+GGG | - | chr4.1:26205630-26205649 | MS.gene006697:intron | 15.0% |
| !!! | TTTGATGATTATTTTGTATT+AGG | - | chr4.1:26205629-26205648 | MS.gene006697:intron | 15.0% |
| !! | AACCCAATACTTATAAATTA+CGG | + | chr4.1:26207008-26207027 | None:intergenic | 20.0% |
| !! | AAGGAGAAATAAAAAATAAC+TGG | - | chr4.1:26206547-26206566 | MS.gene006697:intron | 20.0% |
| !! | AGGAGAAATAAAAAATAACT+GGG | - | chr4.1:26206548-26206567 | MS.gene006697:intron | 20.0% |
| !! | CAGAAAAGAAGAAAAAAAAA+TGG | + | chr4.1:26206404-26206423 | None:intergenic | 20.0% |
| !! | CATTTCCCTAAAAAATATAA+TGG | + | chr4.1:26207262-26207281 | None:intergenic | 20.0% |
| !! | TCAAATTATATAATCTGATG+GGG | + | chr4.1:26206822-26206841 | None:intergenic | 20.0% |
| !!! | ATTTTGAATTCATGATGTTT+TGG | - | chr4.1:26206183-26206202 | MS.gene006697:intron | 20.0% |
| !!! | TTCATATAGAAAATTTTGTG+TGG | - | chr4.1:26206000-26206019 | MS.gene006697:intron | 20.0% |
| !!! | TTTTGAATGAGTAGTTATAT+GGG | - | chr4.1:26205925-26205944 | MS.gene006697:intron | 20.0% |
| !!! | TTTTTGAATGAGTAGTTATA+TGG | - | chr4.1:26205924-26205943 | MS.gene006697:intron | 20.0% |
| ! | AGATTTCGAAATCAAATTGT+GGG | - | chr4.1:26206473-26206492 | MS.gene006697:intron | 25.0% |
| ! | AGCATTTACTTAATTGTTTG+TGG | - | chr4.1:26206622-26206641 | MS.gene006697:intron | 25.0% |
| ! | ATATCATGCTTAATAGATAG+AGG | - | chr4.1:26207225-26207244 | MS.gene006697:intron | 25.0% |
| ! | ATATGATTCAAACTCAATCA+CGG | - | chr4.1:26206374-26206393 | MS.gene006697:intron | 25.0% |
| ! | ATTAAGTAAATGCTAAACAG+TGG | + | chr4.1:26206616-26206635 | None:intergenic | 25.0% |
| ! | CATGTTATCAATAACAAACA+TGG | - | chr4.1:26207480-26207499 | MS.gene006697:intron | 25.0% |
| ! | CATTTACTTAATTGTTTGTG+GGG | - | chr4.1:26206624-26206643 | MS.gene006697:intron | 25.0% |
| ! | CTCCGTAATTTATAAGTATT+GGG | - | chr4.1:26207003-26207022 | MS.gene006697:intron | 25.0% |
| ! | GCATTTACTTAATTGTTTGT+GGG | - | chr4.1:26206623-26206642 | MS.gene006697:intron | 25.0% |
| ! | TAGATTTCGAAATCAAATTG+TGG | - | chr4.1:26206472-26206491 | MS.gene006697:intron | 25.0% |
| ! | TCTCCGTAATTTATAAGTAT+TGG | - | chr4.1:26207002-26207021 | MS.gene006697:intron | 25.0% |
| ! | TTCCCTAAAAAATATAATGG+TGG | + | chr4.1:26207259-26207278 | None:intergenic | 25.0% |
| ! | TTTGAATGAGTAGTTATATG+GGG | - | chr4.1:26205926-26205945 | MS.gene006697:intron | 25.0% |
| !! | TCATGATCAAAATTTTCTCT+TGG | - | chr4.1:26207091-26207110 | MS.gene006697:intron | 25.0% |
| !!! | AATTAATTAGTTTTGGGAAG+AGG | + | chr4.1:26205474-26205493 | None:intergenic | 25.0% |
| !!! | GTCCACCATTATATTTTTTA+GGG | - | chr4.1:26207254-26207273 | MS.gene006697:intron | 25.0% |
| !!! | TGTCCACCATTATATTTTTT+AGG | - | chr4.1:26207253-26207272 | MS.gene006697:intron | 25.0% |
| AATAAAGCAACTGAACAATC+AGG | + | chr4.1:26207143-26207162 | None:intergenic | 30.0% | |
| CAAAATATGTTTGCATAGCT+TGG | - | chr4.1:26206288-26206307 | MS.gene006697:intron | 30.0% | |
| CAGAAAACAGGACTAAAATA+TGG | - | chr4.1:26206513-26206532 | MS.gene006697:intron | 30.0% | |
| TAAAGAACATAAAGAGACTG+AGG | + | chr4.1:26207450-26207469 | None:intergenic | 30.0% | |
| TATGAAAATACTTAAGCTGC+AGG | + | chr4.1:26205986-26206005 | None:intergenic | 30.0% | |
| TTCTACAGCATAAATTTGAG+CGG | + | chr4.1:26206237-26206256 | None:intergenic | 30.0% | |
| ! | AAAATTTTGTGTGGAACATG+TGG | - | chr4.1:26206009-26206028 | MS.gene006697:intron | 30.0% |
| ! | AAATTTTCTCTTGGCTTCAT+TGG | - | chr4.1:26207100-26207119 | MS.gene006697:intron | 30.0% |
| ! | AATTATAGGGTGGATTTGAA+TGG | - | chr4.1:26206648-26206667 | MS.gene006697:intron | 30.0% |
| !!! | AACATATTTTGAGTTGTGCT+TGG | + | chr4.1:26206279-26206298 | None:intergenic | 30.0% |
| AACATAAAGAGACTGAGGTT+GGG | + | chr4.1:26207445-26207464 | None:intergenic | 35.0% | |
| ACTGTCCTTGTAAAGTTGAA+TGG | - | chr4.1:26206938-26206957 | MS.gene006697:intron | 35.0% | |
| AGGCCATATTTCTCAAGATT+GGG | - | chr4.1:26205333-26205352 | MS.gene006697:CDS | 35.0% | |
| AGTGACAACAAAGACGTTAA+AGG | + | chr4.1:26206976-26206995 | None:intergenic | 35.0% | |
| ATCTCATCAAGCATGAGTTA+AGG | + | chr4.1:26207036-26207055 | None:intergenic | 35.0% | |
| ATTGTTTGTGGGGCAATTAT+AGG | - | chr4.1:26206634-26206653 | MS.gene006697:intron | 35.0% | |
| CCATTGATAGAATAGAACCT+CGG | - | chr4.1:26205895-26205914 | MS.gene006697:intron | 35.0% | |
| GCTAACCATTCAACTTTACA+AGG | + | chr4.1:26206946-26206965 | None:intergenic | 35.0% | |
| GCTTGGACTAAAAATCAACA+TGG | + | chr4.1:26206262-26206281 | None:intergenic | 35.0% | |
| GTTCCCAATCTTGAGAAATA+TGG | + | chr4.1:26205339-26205358 | None:intergenic | 35.0% | |
| TAGGCCATATTTCTCAAGAT+TGG | - | chr4.1:26205332-26205351 | MS.gene006697:CDS | 35.0% | |
| TTGTTTGTGGGGCAATTATA+GGG | - | chr4.1:26206635-26206654 | MS.gene006697:intron | 35.0% | |
| ! | AAATATGGCTTGTACACTCA+AGG | - | chr4.1:26206528-26206547 | MS.gene006697:intron | 35.0% |
| ! | AGGGAAATGTTAACCACTTT+TGG | - | chr4.1:26207273-26207292 | MS.gene006697:intron | 35.0% |
| ! | CATTGAAACTGTTTTCGCAA+AGG | - | chr4.1:26206702-26206721 | MS.gene006697:intron | 35.0% |
| ! | GGTTGTGTGTTTTGTGATTT+TGG | - | chr4.1:26205691-26205710 | MS.gene006697:intron | 35.0% |
| ! | GTGTGTTTTGTGATTTTGGA+TGG | - | chr4.1:26205695-26205714 | MS.gene006697:intron | 35.0% |
| ! | TGATTTTGGATGGTGATTGT+TGG | - | chr4.1:26205705-26205724 | MS.gene006697:intron | 35.0% |
| ! | TTGCTAATTATCTGCTGGTT+TGG | + | chr4.1:26207570-26207589 | None:intergenic | 35.0% |
| !! | AATTATCTGCTGGTTTGGAA+TGG | + | chr4.1:26207565-26207584 | None:intergenic | 35.0% |
| !! | CTTTAAGCACTGCTAACTTT+TGG | - | chr4.1:26206123-26206142 | MS.gene006697:intron | 35.0% |
| !! | TTTCTTGACGGTATCGATAT+CGG | + | chr4.1:26205443-26205462 | None:intergenic | 35.0% |
| ACATAAAGAGACTGAGGTTG+GGG | + | chr4.1:26207444-26207463 | None:intergenic | 40.0% | |
| AGAAGGCTATAATGCAAGCT+AGG | - | chr4.1:26207368-26207387 | MS.gene006697:intron | 40.0% | |
| AGAGAGAGCGATCACATAAT+GGG | + | chr4.1:26206857-26206876 | None:intergenic | 40.0% | |
| ATAGCCTTCTTCAGTTCAGT+TGG | + | chr4.1:26207358-26207377 | None:intergenic | 40.0% | |
| ATGTTTGCATAGCTTGGACA+TGG | - | chr4.1:26206294-26206313 | MS.gene006697:intron | 40.0% | |
| CCAGCAGATAATTAGCAAGT+TGG | - | chr4.1:26207572-26207591 | MS.gene006697:CDS | 40.0% | |
| CCGAGGTTCTATTCTATCAA+TGG | + | chr4.1:26205898-26205917 | None:intergenic | 40.0% | |
| CGTATTGCGATTGTTGTAGT+TGG | - | chr4.1:26205522-26205541 | MS.gene006697:intron | 40.0% | |
| GAACATAAAGAGACTGAGGT+TGG | + | chr4.1:26207446-26207465 | None:intergenic | 40.0% | |
| GATGTGCATGAATCCAAAAG+TGG | + | chr4.1:26207289-26207308 | None:intergenic | 40.0% | |
| GCACTTCATTGAACACTAAG+AGG | - | chr4.1:26205781-26205800 | MS.gene006697:intron | 40.0% | |
| GTTATATGGGGAGAATGATG+AGG | - | chr4.1:26205938-26205957 | MS.gene006697:intron | 40.0% | |
| TCAAATTGTGGGTCAAGTTC+CGG | - | chr4.1:26206484-26206503 | MS.gene006697:intron | 40.0% | |
| TCATTCAAAAATCGACACCG+AGG | + | chr4.1:26205915-26205934 | None:intergenic | 40.0% | |
| TCTGTTGACAATCACATGAC+TGG | - | chr4.1:26207307-26207326 | MS.gene006697:intron | 40.0% | |
| TGTACCAACTGAACTGAAGA+AGG | - | chr4.1:26207351-26207370 | MS.gene006697:intron | 40.0% | |
| TGTATTGGAAGTCCATCTAG+CGG | - | chr4.1:26206745-26206764 | MS.gene006697:intron | 40.0% | |
| TGTTTGCATAGCTTGGACAT+GGG | - | chr4.1:26206295-26206314 | MS.gene006697:intron | 40.0% | |
| TTCATTGAACACTAAGAGGC+TGG | - | chr4.1:26205785-26205804 | MS.gene006697:intron | 40.0% | |
| TTTGTGTGGAACATGTGGTT+TGG | - | chr4.1:26206014-26206033 | MS.gene006697:intron | 40.0% | |
| ! | TCTTGCTGTGTGTGTAATTG+TGG | - | chr4.1:26206880-26206899 | MS.gene006697:intron | 40.0% |
| !! | ACACAGCATGCTTTGGAATT+TGG | - | chr4.1:26207183-26207202 | MS.gene006697:CDS | 40.0% |
| !! | CCAACTTGCTAATTATCTGC+TGG | + | chr4.1:26207575-26207594 | None:intergenic | 40.0% |
| AGTCTGTCGTTACCTACTAG+AGG | + | chr4.1:26206342-26206361 | None:intergenic | 45.0% | |
| ATAAAGAGACTGAGGTTGGG+GGG | + | chr4.1:26207442-26207461 | None:intergenic | 45.0% | |
| ATTGTGCACACAGCATGCTT+TGG | - | chr4.1:26207176-26207195 | MS.gene006697:CDS | 45.0% | |
| CAATACAAGCCTTAGAGCCA+AGG | + | chr4.1:26206732-26206751 | None:intergenic | 45.0% | |
| CAATGCATGAATCCGCTAGA+TGG | + | chr4.1:26206760-26206779 | None:intergenic | 45.0% | |
| CATAAAGAGACTGAGGTTGG+GGG | + | chr4.1:26207443-26207462 | None:intergenic | 45.0% | |
| CGTTACCTACTAGAGGACAT+TGG | + | chr4.1:26206335-26206354 | None:intergenic | 45.0% | |
| GACGGCTTTCTCATCTTTCT+TGG | + | chr4.1:26205398-26205417 | None:intergenic | 45.0% | |
| GAGAGAGAGCGATCACATAA+TGG | + | chr4.1:26206858-26206877 | None:intergenic | 45.0% | |
| GAGAGAGCGATCACATAATG+GGG | + | chr4.1:26206856-26206875 | None:intergenic | 45.0% | |
| GGCTATAATGCAAGCTAGGA+TGG | - | chr4.1:26207372-26207391 | MS.gene006697:intron | 45.0% | |
| GGCTTTCTCATCTTTCTTGG+CGG | + | chr4.1:26205395-26205414 | None:intergenic | 45.0% | |
| TCGTACTCTTGGATCACTTG+AGG | + | chr4.1:26207531-26207550 | None:intergenic | 45.0% | |
| TTCCGGATCATGCAGAAAAC+AGG | - | chr4.1:26206501-26206520 | MS.gene006697:intron | 45.0% | |
| TTGGTCCAATGTCCTCTAGT+AGG | - | chr4.1:26206327-26206346 | MS.gene006697:intron | 45.0% | |
| TTTCTCATCTTTCTTGGCGG+CGG | + | chr4.1:26205392-26205411 | None:intergenic | 45.0% | |
| TTTGTGGGGCAATTATAGGG+TGG | - | chr4.1:26206638-26206657 | MS.gene006697:intron | 45.0% | |
| ! | GTCCTGTTTTCTGCATGATC+CGG | + | chr4.1:26206506-26206525 | None:intergenic | 45.0% |
| ! | GTTTTCGCAAAGGAAAGCCT+TGG | - | chr4.1:26206712-26206731 | MS.gene006697:intron | 45.0% |
| ! | TGATCCAAGAGTACGAGTCA+GGG | - | chr4.1:26207535-26207554 | MS.gene006697:CDS | 45.0% |
| !! | AAAGGAAAGCCTTGGCTCTA+AGG | - | chr4.1:26206720-26206739 | MS.gene006697:intron | 45.0% |
| !! | CTTGGCTCTAAGGCTTGTAT+TGG | - | chr4.1:26206730-26206749 | MS.gene006697:intron | 45.0% |
| !! | TGTCTACTGACTCTTGCAAC+TGG | - | chr4.1:26206049-26206068 | MS.gene006697:intron | 45.0% |
| GAACACTAAGAGGCTGGATG+AGG | - | chr4.1:26205791-26205810 | MS.gene006697:intron | 50.0% | |
| GAGGAGCGAACGTTTCTTGA+CGG | + | chr4.1:26205455-26205474 | None:intergenic | 50.0% | |
| ! | CTTTCCCTGACTCGTACTCT+TGG | + | chr4.1:26207542-26207561 | None:intergenic | 50.0% |
| ! | GTGATCCAAGAGTACGAGTC+AGG | - | chr4.1:26207534-26207553 | MS.gene006697:CDS | 50.0% |
| ! | TGGACATGGGAGTGTGATCT+TGG | - | chr4.1:26206308-26206327 | MS.gene006697:intron | 50.0% |
| GCTTTCTTGCGGATGACGAC+TGG | + | chr4.1:26205361-26205380 | None:intergenic | 55.0% | |
| ! | AGCAAGTTGGAGAGAGCCCT+TGG | - | chr4.1:26207585-26207604 | MS.gene006697:CDS | 55.0% |
| ! | GCCACGCAGTTTAGCTCCAA+GGG | + | chr4.1:26207604-26207623 | None:intergenic | 55.0% |
| ! | TGCCACGCAGTTTAGCTCCA+AGG | + | chr4.1:26207605-26207624 | None:intergenic | 55.0% |
| ATCTTTCTTGGCGGCGGCGT+TGG | + | chr4.1:26205386-26205405 | None:intergenic | 60.0% | |
| GCCCTTGGAGCTAAACTGCG+TGG | - | chr4.1:26207600-26207619 | MS.gene006697:CDS | 60.0% | |
| TCTTTCTTGGCGGCGGCGTT+GGG | + | chr4.1:26205385-26205404 | None:intergenic | 60.0% | |
| ! | CGGCGTTGGGAGCTTTCTTG+CGG | + | chr4.1:26205372-26205391 | None:intergenic | 60.0% |
| !! | GACGGTATCGATATCGGCGC+CGG | + | chr4.1:26205437-26205456 | None:intergenic | 60.0% |
| !! | TATCGATATCGGCGCCGGCA+CGG | + | chr4.1:26205432-26205451 | None:intergenic | 60.0% |
| GTCAACGCCGCTCGCCGTGC+CGG | - | chr4.1:26205415-26205434 | MS.gene006697:CDS | 75.0% | |
| ! | GGCACGGCGAGCGGCGTTGA+CGG | + | chr4.1:26205416-26205435 | None:intergenic | 75.0% |
| !!! | ATCGGCGCCGGCACGGCGAG+CGG | + | chr4.1:26205425-26205444 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 26205322 | 26207632 | 26205322 | ID=MS.gene006697 |
| chr4.1 | mRNA | 26205322 | 26207632 | 26205322 | ID=MS.gene006697.t1;Parent=MS.gene006697 |
| chr4.1 | exon | 26207491 | 26207632 | 26207491 | ID=MS.gene006697.t1.exon1;Parent=MS.gene006697.t1 |
| chr4.1 | CDS | 26207491 | 26207632 | 26207491 | ID=cds.MS.gene006697.t1;Parent=MS.gene006697.t1 |
| chr4.1 | exon | 26207123 | 26207206 | 26207123 | ID=MS.gene006697.t1.exon2;Parent=MS.gene006697.t1 |
| chr4.1 | CDS | 26207123 | 26207206 | 26207123 | ID=cds.MS.gene006697.t1;Parent=MS.gene006697.t1 |
| chr4.1 | exon | 26205528 | 26205610 | 26205528 | ID=MS.gene006697.t1.exon3;Parent=MS.gene006697.t1 |
| chr4.1 | CDS | 26205528 | 26205610 | 26205528 | ID=cds.MS.gene006697.t1;Parent=MS.gene006697.t1 |
| chr4.1 | exon | 26205322 | 26205441 | 26205322 | ID=MS.gene006697.t1.exon4;Parent=MS.gene006697.t1 |
| chr4.1 | CDS | 26205322 | 26205441 | 26205322 | ID=cds.MS.gene006697.t1;Parent=MS.gene006697.t1 |
| Gene Sequence |
| Protein sequence |
