Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007842.t1 | AFK33917.1 | 69.6 | 329 | 9 | 2 | 1 | 327 | 1 | 240 | 5.60E-113 | 417.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007842.t1 | Q9SYL9 | 49.1 | 338 | 64 | 5 | 1 | 327 | 1 | 241 | 3.4e-71 | 270.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007842.t1 | I3S0X5 | 69.6 | 329 | 9 | 2 | 1 | 327 | 1 | 240 | 4.0e-113 | 417.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007842 | MS.gene005865 | PPI |
| MS.gene007842 | MS.gene026968 | PPI |
| MS.gene34167 | MS.gene007842 | PPI |
| MS.gene007842 | MS.gene028903 | PPI |
| MS.gene007842 | MS.gene055808 | PPI |
| MS.gene60589 | MS.gene007842 | PPI |
| MS.gene007842 | MS.gene82915 | PPI |
| MS.gene31468 | MS.gene007842 | PPI |
| MS.gene007842 | MS.gene043435 | PPI |
| MS.gene007842 | MS.gene60861 | PPI |
| MS.gene007842 | MS.gene001687 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007842.t1 | MTR_8g054450 | 96.535 | 202 | 5 | 1 | 1 | 200 | 1 | 202 | 3.96e-142 | 401 |
| MS.gene007842.t1 | MTR_8g054450 | 100.000 | 38 | 0 | 0 | 290 | 327 | 203 | 240 | 1.09e-18 | 84.0 |
| MS.gene007842.t1 | MTR_8g054450 | 85.276 | 163 | 22 | 1 | 1 | 161 | 1 | 163 | 2.34e-64 | 202 |
| MS.gene007842.t1 | MTR_3g082760 | 42.268 | 97 | 56 | 0 | 102 | 198 | 26 | 122 | 4.30e-17 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007842.t1 | AT1G78630 | 82.979 | 141 | 22 | 1 | 60 | 200 | 65 | 203 | 4.65e-81 | 246 |
| MS.gene007842.t1 | AT1G78630 | 81.579 | 38 | 7 | 0 | 290 | 327 | 204 | 241 | 5.06e-15 | 73.9 |
| MS.gene007842.t1 | AT3G01790 | 37.500 | 96 | 60 | 0 | 102 | 197 | 32 | 127 | 3.90e-15 | 72.4 |
| MS.gene007842.t1 | AT3G01790 | 37.500 | 96 | 60 | 0 | 102 | 197 | 32 | 127 | 2.10e-14 | 71.2 |
| MS.gene007842.t1 | AT3G01790 | 37.500 | 96 | 60 | 0 | 102 | 197 | 32 | 127 | 2.10e-14 | 71.2 |
Find 86 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATCCTGTTTCAGATTAT+TGG | 0.137478 | 8.1:-53426490 | MS.gene007842:intron |
| TGTATTCTCTTATCCCTAAT+TGG | 0.216660 | 8.1:+53425728 | None:intergenic |
| TCAGAAAACAATTGTGAATA+TGG | 0.222297 | 8.1:+53426456 | None:intergenic |
| GCCCATTGATTTGCCAATTA+GGG | 0.248728 | 8.1:-53425741 | MS.gene007842:CDS |
| AGCCCATTGATTTGCCAATT+AGG | 0.260148 | 8.1:-53425742 | MS.gene007842:CDS |
| TGCGCTTCATGTGGATGATC+TGG | 0.278875 | 8.1:+53425767 | None:intergenic |
| TTGACATGATCCGAAGCTTT+TGG | 0.279177 | 8.1:+53429097 | None:intergenic |
| AGTGCCGCCGATAAAGCTTC+TGG | 0.285755 | 8.1:+53427599 | None:intergenic |
| ACCTAGCATTGATGAGTATC+AGG | 0.287433 | 8.1:+53426589 | None:intergenic |
| GATGCTACAGATAAAATTCT+TGG | 0.293196 | 8.1:-53429049 | MS.gene007842:CDS |
| TGTTCAACCTGCCCAGTTCT+TGG | 0.311038 | 8.1:+53426289 | None:intergenic |
| AGAATATCTTTAATTTCGTC+TGG | 0.319205 | 8.1:-53426348 | MS.gene007842:CDS |
| GTTGAACTTACCCTCCCTTT+TGG | 0.329004 | 8.1:+53427481 | None:intergenic |
| CAACCACTGCAGGCTTGCTC+TGG | 0.334288 | 8.1:-53426386 | MS.gene007842:CDS |
| AGTAATGATTGCAGGACATT+TGG | 0.339663 | 8.1:-53429135 | MS.gene007842:intron |
| GTTATACCGGGCCTTGAAAT+CGG | 0.364119 | 8.1:+53429658 | None:intergenic |
| GTTCAACCTGCCCAGTTCTT+GGG | 0.369099 | 8.1:+53426290 | None:intergenic |
| TAATGCTGAAACCCAAGAAC+TGG | 0.392805 | 8.1:-53426301 | MS.gene007842:CDS |
| AGAGGACCCAGAAGCTTTAT+CGG | 0.394368 | 8.1:-53427606 | MS.gene007842:CDS |
| CTGGGCCGCTATAAACCTTC+AGG | 0.404656 | 8.1:+53425786 | None:intergenic |
| TTATACCGGGCCTTGAAATC+GGG | 0.412903 | 8.1:+53429659 | None:intergenic |
| ATCCCTAATTGGCAAATCAA+TGG | 0.418119 | 8.1:+53425739 | None:intergenic |
| CAGAAAACAATTGTGAATAT+GGG | 0.424932 | 8.1:+53426457 | None:intergenic |
| GCATGTTCAATAATTCGTTC+AGG | 0.425127 | 8.1:+53427520 | None:intergenic |
| AAATCCATTGCAGAGGATAA+TGG | 0.426896 | 8.1:+53426429 | None:intergenic |
| GAACCTGAGCCCCGATTTCA+AGG | 0.430760 | 8.1:-53429669 | MS.gene007842:CDS |
| TGGTAATTGAGAAGCAAGAA+AGG | 0.434624 | 8.1:+53429800 | None:intergenic |
| CAGGAATTCTGTTCTGCAGC+TGG | 0.453155 | 8.1:+53427539 | None:intergenic |
| GATATTCTAGTTGAATTGAC+AGG | 0.453712 | 8.1:+53426363 | None:intergenic |
| TCCCTAATTGGCAAATCAAT+GGG | 0.458371 | 8.1:+53425740 | None:intergenic |
| TCTGTAGATAAATGCAGAAA+AGG | 0.458587 | 8.1:-53427647 | MS.gene007842:intron |
| AAGAAGAAGAAGAGCGAAGA+AGG | 0.462037 | 8.1:+53426620 | None:intergenic |
| GCGCTTCATGTGGATGATCT+GGG | 0.462607 | 8.1:+53425768 | None:intergenic |
| GTTCGTGGCATGCTTCCAAA+AGG | 0.478146 | 8.1:-53427496 | MS.gene007842:CDS |
| TTTCATTGTTCATTCTCAGC+AGG | 0.482475 | 8.1:-53429733 | MS.gene007842:CDS |
| GTGCCGCCGATAAAGCTTCT+GGG | 0.487074 | 8.1:+53427600 | None:intergenic |
| ATTATTGAACATGCTGTTCG+TGG | 0.489898 | 8.1:-53427511 | MS.gene007842:CDS |
| GGGCCTTGAAATCGGGGCTC+AGG | 0.492080 | 8.1:+53429666 | None:intergenic |
| AGGACATTTGGAACACAACC+TGG | 0.498468 | 8.1:-53429123 | MS.gene007842:CDS |
| CGGCGGCACTCAGGTCGACC+TGG | 0.501166 | 8.1:-53427586 | MS.gene007842:CDS |
| ACGAGGATCTTCTTCGACAA+TGG | 0.505973 | 8.1:+53429704 | None:intergenic |
| TGAGAGAATGAAGAAGATGA+AGG | 0.506757 | 8.1:+53429849 | None:intergenic |
| GACTCTATTCACACGCCTGA+AGG | 0.513706 | 8.1:-53425801 | MS.gene007842:CDS |
| GAGTATTCTGCAACCACTGC+AGG | 0.520314 | 8.1:-53426396 | MS.gene007842:CDS |
| GAATATCTTTAATTTCGTCT+GGG | 0.523092 | 8.1:-53426347 | MS.gene007842:CDS |
| TCCTGATACTCATCAATGCT+AGG | 0.526363 | 8.1:-53426590 | MS.gene007842:intron |
| AAGCTTTATCGGCGGCACTC+AGG | 0.528770 | 8.1:-53427595 | MS.gene007842:CDS |
| AAATGCACCCATGTCCACAC+TGG | 0.530923 | 8.1:+53428967 | None:intergenic |
| CTGAAACCCAAGAACTGGGC+AGG | 0.531082 | 8.1:-53426296 | MS.gene007842:intron |
| TGGGTTTCAGCATTACAAGA+TGG | 0.532242 | 8.1:+53426309 | None:intergenic |
| AGAAAACAATTGTGAATATG+GGG | 0.539229 | 8.1:+53426458 | None:intergenic |
| GATAATGAAAGGTTTGAAAG+TGG | 0.541301 | 8.1:+53429780 | None:intergenic |
| AACCTGGTATCCAAAAGCTT+CGG | 0.541687 | 8.1:-53429107 | MS.gene007842:CDS |
| GAAGAGCGAAGAAGGAGCAG+AGG | 0.543469 | 8.1:+53426628 | None:intergenic |
| ATGGGCTGCTGCGCTTCATG+TGG | 0.546351 | 8.1:+53425758 | None:intergenic |
| CATGGGTGCATTTGTAATTG+TGG | 0.546463 | 8.1:-53428957 | MS.gene007842:intron |
| TTCTCCATTATCCTCTGCAA+TGG | 0.546691 | 8.1:-53426433 | MS.gene007842:CDS |
| GCAGAAAAGGTTGCTGTCAG+TGG | 0.548150 | 8.1:-53427634 | MS.gene007842:CDS |
| TTGAAGAAGATGATAATGAA+AGG | 0.554980 | 8.1:+53429769 | None:intergenic |
| GAGAGAATGAAGAAGATGAA+GGG | 0.556314 | 8.1:+53429850 | None:intergenic |
| CAGAAAAGGTTGCTGTCAGT+GGG | 0.568241 | 8.1:-53427633 | MS.gene007842:CDS |
| AGGCCAGAGCAAGCCTGCAG+TGG | 0.574815 | 8.1:+53426383 | None:intergenic |
| TGAGAATGAACAATGAAAGA+TGG | 0.579486 | 8.1:+53429738 | None:intergenic |
| AATGCACCCATGTCCACACT+GGG | 0.589532 | 8.1:+53428968 | None:intergenic |
| GATGAAGGGAACGTCACTGA+TGG | 0.593477 | 8.1:+53429864 | None:intergenic |
| TTCGTGGCATGCTTCCAAAA+GGG | 0.595250 | 8.1:-53427495 | MS.gene007842:CDS |
| TGAGCCCCGATTTCAAGGCC+CGG | 0.602419 | 8.1:-53429664 | MS.gene007842:intron |
| AATGCTGAAACCCAAGAACT+GGG | 0.604092 | 8.1:-53426300 | MS.gene007842:CDS |
| TTATACACCCAGTGTGGACA+TGG | 0.605815 | 8.1:-53428975 | MS.gene007842:CDS |
| GTCTCGACTGTCATACCACC+AGG | 0.617174 | 8.1:+53427568 | None:intergenic |
| TATACCGGGCCTTGAAATCG+GGG | 0.617699 | 8.1:+53429660 | None:intergenic |
| TGATGGTGAACCACACAGCA+AGG | 0.624881 | 8.1:+53429881 | None:intergenic |
| GTGGCATGCTTCCAAAAGGG+AGG | 0.631240 | 8.1:-53427492 | MS.gene007842:CDS |
| TGGCATGCTTCCAAAAGGGA+GGG | 0.645169 | 8.1:-53427491 | MS.gene007842:intron |
| CAATTGCGAATCACATCCGA+GGG | 0.651937 | 8.1:-53429012 | MS.gene007842:CDS |
| ACAATTGCGAATCACATCCG+AGG | 0.652462 | 8.1:-53429013 | MS.gene007842:CDS |
| GAAAACAATTGTGAATATGG+GGG | 0.658781 | 8.1:+53426459 | None:intergenic |
| TATACACCCAGTGTGGACAT+GGG | 0.666351 | 8.1:-53428974 | MS.gene007842:CDS |
| GCATGTTAAATCCATTGCAG+AGG | 0.668423 | 8.1:+53426422 | None:intergenic |
| GCAACAATGTCCTTGCTGTG+TGG | 0.677674 | 8.1:-53429891 | None:intergenic |
| ATGTCAATACAGCGAAAACG+TGG | 0.689193 | 8.1:-53429081 | MS.gene007842:CDS |
| ACACGCCTGAAGGTTTATAG+CGG | 0.692335 | 8.1:-53425791 | MS.gene007842:CDS |
| CGGCACTCAGGTCGACCTGG+TGG | 0.696042 | 8.1:-53427583 | MS.gene007842:CDS |
| GGACCCAGAAGCTTTATCGG+CGG | 0.709633 | 8.1:-53427603 | MS.gene007842:CDS |
| AGTGACTTATACACCCAGTG+TGG | 0.728515 | 8.1:-53428981 | MS.gene007842:CDS |
| GGTTCAACACAGATGAAACG+AGG | 0.749686 | 8.1:+53429687 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGGTTTTAAATTTTAATTAT+AGG | - | chr8.1:53427672-53427691 | MS.gene007842:intron | 10.0% |
| !! | AAAAAAAAATCAGAAAGAAT+AGG | - | chr8.1:53429384-53429403 | MS.gene007842:intron | 15.0% |
| !! | AAAAACTAAAATATCAATAG+AGG | - | chr8.1:53427757-53427776 | MS.gene007842:intron | 15.0% |
| !! | ACTATATTTGTAAACAATAA+AGG | - | chr8.1:53429720-53429739 | MS.gene007842:CDS | 15.0% |
| !! | ATAATTGAAGTAAATTAACA+TGG | + | chr8.1:53426225-53426244 | None:intergenic | 15.0% |
| !!! | AATTTTCTTTTGGTTTAAAA+TGG | - | chr8.1:53426772-53426791 | MS.gene007842:intron | 15.0% |
| !!! | TATTTTATTTCGAAAAAAGA+TGG | - | chr8.1:53427003-53427022 | MS.gene007842:intron | 15.0% |
| !!! | TATTTTTAAAGCTTTTAACT+TGG | - | chr8.1:53426395-53426414 | MS.gene007842:CDS | 15.0% |
| !!! | TGATATTTTAGTTTTTTTTG+TGG | + | chr8.1:53427753-53427772 | None:intergenic | 15.0% |
| !! | AAAAACTGAAAGGAAAAAAT+TGG | + | chr8.1:53426308-53426327 | None:intergenic | 20.0% |
| !! | AATGATGATAACAATTTGAA+GGG | + | chr8.1:53426969-53426988 | None:intergenic | 20.0% |
| !! | AATTGTTTATCATGGAAAAT+TGG | + | chr8.1:53427728-53427747 | None:intergenic | 20.0% |
| !! | CTGAAATAATTAGAGAAATA+AGG | + | chr8.1:53427168-53427187 | None:intergenic | 20.0% |
| !! | TATAAATTGTATACAGTGTT+AGG | + | chr8.1:53429556-53429575 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTACTATGCATT+TGG | - | chr8.1:53427652-53427671 | MS.gene007842:intron | 20.0% |
| !!! | AATTTTCTGGTATTAATTTC+TGG | - | chr8.1:53426037-53426056 | MS.gene007842:intron | 20.0% |
| !!! | AGTTTTGACAATAAAAATTG+AGG | + | chr8.1:53426095-53426114 | None:intergenic | 20.0% |
| !!! | ATGATTTTGTTGAAATTTTC+TGG | - | chr8.1:53426024-53426043 | MS.gene007842:intron | 20.0% |
| !!! | ATTTTCTGGTATTAATTTCT+GGG | - | chr8.1:53426038-53426057 | MS.gene007842:intron | 20.0% |
| !!! | TCCTTTCAGTTTTTATTTTT+TGG | - | chr8.1:53426314-53426333 | MS.gene007842:CDS | 20.0% |
| !!! | TGCTAGGTTAAAATTATTTT+TGG | - | chr8.1:53429026-53429045 | MS.gene007842:CDS | 20.0% |
| ! | AAAATCAACCTAAAGAGATA+AGG | + | chr8.1:53429695-53429714 | None:intergenic | 25.0% |
| ! | AAACAAAATCTCCTACAAAA+TGG | - | chr8.1:53427780-53427799 | MS.gene007842:intron | 25.0% |
| ! | AAACCAGAAAGAAGATAATA+AGG | + | chr8.1:53426144-53426163 | None:intergenic | 25.0% |
| ! | AATAGTAGAGTAGTTAAAGT+AGG | + | chr8.1:53429527-53429546 | None:intergenic | 25.0% |
| ! | ACTAATGAGATACAAAATGT+AGG | + | chr8.1:53426249-53426268 | None:intergenic | 25.0% |
| ! | AGAAAACAATTGTGAATATG+GGG | + | chr8.1:53429145-53429164 | None:intergenic | 25.0% |
| ! | AGGATTGTTATGTATAAACA+GGG | + | chr8.1:53429507-53429526 | None:intergenic | 25.0% |
| ! | ATATATTCTTCCATCAGTTA+TGG | + | chr8.1:53428284-53428303 | None:intergenic | 25.0% |
| ! | ATGTATGACTAATTATCTGA+TGG | - | chr8.1:53427696-53427715 | MS.gene007842:intron | 25.0% |
| ! | CACAATAAAGAAGCAAAAAA+TGG | + | chr8.1:53428757-53428776 | None:intergenic | 25.0% |
| ! | CAGAAAACAATTGTGAATAT+GGG | + | chr8.1:53429146-53429165 | None:intergenic | 25.0% |
| ! | CATGTTATAAATAAGAAGAC+GGG | + | chr8.1:53427145-53427164 | None:intergenic | 25.0% |
| ! | CATTAATGACTATGTTTATG+AGG | - | chr8.1:53427831-53427850 | MS.gene007842:intron | 25.0% |
| ! | CTGCATTAATTATTTGCAAT+TGG | - | chr8.1:53426675-53426694 | MS.gene007842:intron | 25.0% |
| ! | CTGTATACAATTTATACTCA+TGG | - | chr8.1:53429560-53429579 | MS.gene007842:intron | 25.0% |
| ! | GAATGATGATAACAATTTGA+AGG | + | chr8.1:53426970-53426989 | None:intergenic | 25.0% |
| ! | GCATGTTATAAATAAGAAGA+CGG | + | chr8.1:53427146-53427165 | None:intergenic | 25.0% |
| ! | GCCAAAAAATAAAAACTGAA+AGG | + | chr8.1:53426318-53426337 | None:intergenic | 25.0% |
| ! | GGAACTTATGAAATATATGA+TGG | - | chr8.1:53426797-53426816 | MS.gene007842:intron | 25.0% |
| ! | GTTATGTATATCTGATGTTA+AGG | - | chr8.1:53427594-53427613 | MS.gene007842:CDS | 25.0% |
| ! | TACCATTATTCATTATGTGA+CGG | + | chr8.1:53428586-53428605 | None:intergenic | 25.0% |
| ! | TAGGATTGTTATGTATAAAC+AGG | + | chr8.1:53429508-53429527 | None:intergenic | 25.0% |
| ! | TATCTATAGAATGTAGAAAG+CGG | + | chr8.1:53427626-53427645 | None:intergenic | 25.0% |
| ! | TCAGAAAACAATTGTGAATA+TGG | + | chr8.1:53429147-53429166 | None:intergenic | 25.0% |
| ! | TCTACATTCTATAGATAGTA+AGG | - | chr8.1:53427629-53427648 | MS.gene007842:CDS | 25.0% |
| ! | TTAATTATTTGCAATTGGCA+TGG | - | chr8.1:53426680-53426699 | MS.gene007842:intron | 25.0% |
| ! | TTGTGGAAAATTGTTTATCA+TGG | + | chr8.1:53427736-53427755 | None:intergenic | 25.0% |
| !! | AAACAATACAACCATTTTGT+AGG | + | chr8.1:53427794-53427813 | None:intergenic | 25.0% |
| !! | AACTTGTGTTAATTCTAAAG+AGG | - | chr8.1:53429666-53429685 | MS.gene007842:CDS | 25.0% |
| !! | AATCATTACTCTTTTCAGTT+AGG | + | chr8.1:53426455-53426474 | None:intergenic | 25.0% |
| !! | ACTTGTGTTAATTCTAAAGA+GGG | - | chr8.1:53429667-53429686 | MS.gene007842:CDS | 25.0% |
| !! | AGAATATCTTTAATTTCGTC+TGG | - | chr8.1:53429252-53429271 | MS.gene007842:intron | 25.0% |
| !! | ATTGCTTTAAATCTTTACGT+CGG | - | chr8.1:53426356-53426375 | MS.gene007842:CDS | 25.0% |
| !! | GAATATCTTTAATTTCGTCT+GGG | - | chr8.1:53429253-53429272 | MS.gene007842:intron | 25.0% |
| !! | TAATTAGCTTGGAAATGTAT+AGG | - | chr8.1:53426270-53426289 | MS.gene007842:intron | 25.0% |
| !! | TCTCATTAGTTTAATTAGCT+TGG | - | chr8.1:53426259-53426278 | MS.gene007842:intron | 25.0% |
| !! | TTGAAGAAGATGATAATGAA+AGG | + | chr8.1:53425834-53425853 | None:intergenic | 25.0% |
| !! | TTTTTACTTGAACATCTTTC+TGG | - | chr8.1:53426747-53426766 | MS.gene007842:intron | 25.0% |
| !!! | CAAACCAAAGTTTTTTGAAA+CGG | - | chr8.1:53426855-53426874 | MS.gene007842:intron | 25.0% |
| !!! | CATTAAGAGTACTAGTATTT+AGG | + | chr8.1:53427337-53427356 | None:intergenic | 25.0% |
| !!! | CTCTCTCTTTTTTTGTTAAT+GGG | - | chr8.1:53425967-53425986 | MS.gene007842:intron | 25.0% |
| !!! | CTTGGACTATTATTTTAACT+GGG | - | chr8.1:53427928-53427947 | MS.gene007842:intron | 25.0% |
| !!! | CTTTCTGGTTAATTTTCTTT+TGG | - | chr8.1:53426762-53426781 | MS.gene007842:intron | 25.0% |
| !!! | GAAATTTTTAATAAGTGCTG+AGG | + | chr8.1:53427095-53427114 | None:intergenic | 25.0% |
| !!! | TCTCTCTCTTTTTTTGTTAA+TGG | - | chr8.1:53425966-53425985 | MS.gene007842:intron | 25.0% |
| !!! | TCTTGGACTATTATTTTAAC+TGG | - | chr8.1:53427927-53427946 | MS.gene007842:intron | 25.0% |
| !!! | TTCTTTTGGTTTAAAATGGA+TGG | - | chr8.1:53426776-53426795 | MS.gene007842:intron | 25.0% |
| !!! | TTGGACTATTATTTTAACTG+GGG | - | chr8.1:53427929-53427948 | MS.gene007842:intron | 25.0% |
| AAAAGAGAGAGAAGTTATAC+CGG | + | chr8.1:53425958-53425977 | None:intergenic | 30.0% | |
| AAAGTCGAAGTTGTGATAAT+TGG | + | chr8.1:53428629-53428648 | None:intergenic | 30.0% | |
| AAGTCGAAGTTGTGATAATT+GGG | + | chr8.1:53428628-53428647 | None:intergenic | 30.0% | |
| AATAACAGTAACTCTCCAAA+AGG | + | chr8.1:53427269-53427288 | None:intergenic | 30.0% | |
| ACTATGGACGTTATATTACA+AGG | + | chr8.1:53427199-53427218 | None:intergenic | 30.0% | |
| AGATTCATTTCCATAACTGA+TGG | - | chr8.1:53428271-53428290 | MS.gene007842:intron | 30.0% | |
| AGCAAGACAAATCACAAATT+TGG | + | chr8.1:53429053-53429072 | None:intergenic | 30.0% | |
| ATCATCATTCTGATAGAAAC+TGG | - | chr8.1:53426980-53426999 | MS.gene007842:intron | 30.0% | |
| ATGTCCGTTTCAAAAAACTT+TGG | + | chr8.1:53426862-53426881 | None:intergenic | 30.0% | |
| ATTGTTATGTATAAACAGGG+AGG | + | chr8.1:53429504-53429523 | None:intergenic | 30.0% | |
| GAAAACAATTGTGAATATGG+GGG | + | chr8.1:53429144-53429163 | None:intergenic | 30.0% | |
| GATAATGAAAGGTTTGAAAG+TGG | + | chr8.1:53425823-53425842 | None:intergenic | 30.0% | |
| GATAGTTAACAACTGTACTA+TGG | + | chr8.1:53427215-53427234 | None:intergenic | 30.0% | |
| GATGCTACAGATAAAATTCT+TGG | - | chr8.1:53426551-53426570 | MS.gene007842:intron | 30.0% | |
| GTCACATTGACAAAGAAATT+TGG | - | chr8.1:53427398-53427417 | MS.gene007842:intron | 30.0% | |
| TCATAAAGCAATCGTCTAAA+CGG | + | chr8.1:53427905-53427924 | None:intergenic | 30.0% | |
| TCTGTAGATAAATGCAGAAA+AGG | - | chr8.1:53427953-53427972 | MS.gene007842:intron | 30.0% | |
| TGAGAATGAACAATGAAAGA+TGG | + | chr8.1:53425865-53425884 | None:intergenic | 30.0% | |
| TGTATTCTCTTATCCCTAAT+TGG | + | chr8.1:53429875-53429894 | None:intergenic | 30.0% | |
| TTATGTCTGAATGTTTGTCA+TGG | - | chr8.1:53427530-53427549 | MS.gene007842:CDS | 30.0% | |
| TTCTATTCCATTCAGTTCTT+GGG | + | chr8.1:53429351-53429370 | None:intergenic | 30.0% | |
| TTGATCCTGTTTCAGATTAT+TGG | - | chr8.1:53429110-53429129 | MS.gene007842:CDS | 30.0% | |
| TTTCTATTCCATTCAGTTCT+TGG | + | chr8.1:53429352-53429371 | None:intergenic | 30.0% | |
| ! | AGATGGAGAAAACAACTTTT+TGG | + | chr8.1:53428932-53428951 | None:intergenic | 30.0% |
| ! | ATTATTCATTATGTGACGGA+GGG | + | chr8.1:53428582-53428601 | None:intergenic | 30.0% |
| ! | ATTTGTGATTTGTCTTGCTT+TGG | - | chr8.1:53429054-53429073 | MS.gene007842:CDS | 30.0% |
| ! | GATATTCTAGTTGAATTGAC+AGG | + | chr8.1:53429240-53429259 | None:intergenic | 30.0% |
| ! | TTTTCCACTGTTATTACTTC+CGG | - | chr8.1:53428883-53428902 | MS.gene007842:intron | 30.0% |
| !! | AAGCCTTATTATCTTCTTTC+TGG | - | chr8.1:53426138-53426157 | MS.gene007842:intron | 30.0% |
| !! | ATTTTAGCCTTTCCTTTTTG+CGG | - | chr8.1:53426904-53426923 | MS.gene007842:intron | 30.0% |
| !!! | AAGTTCATTGGTTGTTTTTG+TGG | - | chr8.1:53429618-53429637 | MS.gene007842:intron | 30.0% |
| !!! | CATGGAAATGCTGTTTTTTA+TGG | - | chr8.1:53426698-53426717 | MS.gene007842:intron | 30.0% |
| !!! | GTTTTTTGAAACGGACATAT+AGG | - | chr8.1:53426864-53426883 | MS.gene007842:intron | 30.0% |
| !!! | TACACGTTTTTGGTTTGAAA+GGG | - | chr8.1:53428350-53428369 | MS.gene007842:intron | 30.0% |
| AAACAACCAATGAACTTGAC+AGG | + | chr8.1:53429615-53429634 | None:intergenic | 35.0% | |
| AAAGAGAGAGAAGTTATACC+GGG | + | chr8.1:53425957-53425976 | None:intergenic | 35.0% | |
| AAAGTAGACTTTGTCTTCAG+CGG | - | chr8.1:53428415-53428434 | MS.gene007842:intron | 35.0% | |
| AAATCCATTGCAGAGGATAA+TGG | + | chr8.1:53429174-53429193 | None:intergenic | 35.0% | |
| AACAGTGGAAAAGGAGAAAT+GGG | + | chr8.1:53428875-53428894 | None:intergenic | 35.0% | |
| AAGTTAGAGGCAAAACATCA+AGG | - | chr8.1:53427044-53427063 | MS.gene007842:intron | 35.0% | |
| ACGATTGCTTTATGAAGTCT+TGG | - | chr8.1:53427910-53427929 | MS.gene007842:intron | 35.0% | |
| AGAGAAGAGTTCTTATGACA+AGG | + | chr8.1:53429088-53429107 | None:intergenic | 35.0% | |
| AGCATAAAACTTCGTGAGAA+GGG | + | chr8.1:53427861-53427880 | None:intergenic | 35.0% | |
| AGTAATGATTGCAGGACATT+TGG | - | chr8.1:53426465-53426484 | MS.gene007842:CDS | 35.0% | |
| AGTAGCGACTATATTGTGAA+GGG | + | chr8.1:53429422-53429441 | None:intergenic | 35.0% | |
| AGTTAGAGGCAAAACATCAA+GGG | - | chr8.1:53427045-53427064 | MS.gene007842:intron | 35.0% | |
| AGTTGAATCTACAGTAACCA+AGG | - | chr8.1:53429754-53429773 | MS.gene007842:CDS | 35.0% | |
| ATCCCTAATTGGCAAATCAA+TGG | + | chr8.1:53429864-53429883 | None:intergenic | 35.0% | |
| ATGTGACATTATTACAGCAG+AGG | + | chr8.1:53427385-53427404 | None:intergenic | 35.0% | |
| ATTATTGAACATGCTGTTCG+TGG | - | chr8.1:53428089-53428108 | MS.gene007842:intron | 35.0% | |
| CATTATTCATTATGTGACGG+AGG | + | chr8.1:53428583-53428602 | None:intergenic | 35.0% | |
| CTCCGTCACATAATGAATAA+TGG | - | chr8.1:53428581-53428600 | MS.gene007842:intron | 35.0% | |
| CTGAAAAGAGTAATGATTGC+AGG | - | chr8.1:53426457-53426476 | MS.gene007842:CDS | 35.0% | |
| GAAACGGACATATAGGTTAA+TGG | - | chr8.1:53426871-53426890 | MS.gene007842:intron | 35.0% | |
| GAATACAGTTGCAGAGATAA+TGG | - | chr8.1:53429888-53429907 | MS.gene007842:CDS | 35.0% | |
| GAGAGAATGAAGAAGATGAA+GGG | + | chr8.1:53425753-53425772 | None:intergenic | 35.0% | |
| GAGTACTAGTATTTAGGAAG+AGG | + | chr8.1:53427331-53427350 | None:intergenic | 35.0% | |
| GCATGTTCAATAATTCGTTC+AGG | + | chr8.1:53428083-53428102 | None:intergenic | 35.0% | |
| GGAAGTAATAACAGTGGAAA+AGG | + | chr8.1:53428884-53428903 | None:intergenic | 35.0% | |
| GTACAGTAGACATGTTAAGA+TGG | - | chr8.1:53428169-53428188 | MS.gene007842:intron | 35.0% | |
| GTTGAATCTACAGTAACCAA+GGG | - | chr8.1:53429755-53429774 | MS.gene007842:CDS | 35.0% | |
| TAACAGTGGAAAAGGAGAAA+TGG | + | chr8.1:53428876-53428895 | None:intergenic | 35.0% | |
| TAACTATCGAGGAAGGAATA+TGG | + | chr8.1:53428669-53428688 | None:intergenic | 35.0% | |
| TAGCATAAAACTTCGTGAGA+AGG | + | chr8.1:53427862-53427881 | None:intergenic | 35.0% | |
| TATCACAACTTCGACTTTGA+AGG | - | chr8.1:53428631-53428650 | MS.gene007842:intron | 35.0% | |
| TCCCTAATTGGCAAATCAAT+GGG | + | chr8.1:53429863-53429882 | None:intergenic | 35.0% | |
| TGAAGACAAAGTCTACTTTC+AGG | + | chr8.1:53428414-53428433 | None:intergenic | 35.0% | |
| TGAGAGAATGAAGAAGATGA+AGG | + | chr8.1:53425754-53425773 | None:intergenic | 35.0% | |
| TGGTAATTGAGAAGCAAGAA+AGG | + | chr8.1:53425803-53425822 | None:intergenic | 35.0% | |
| TGTGACATTATTACAGCAGA+GGG | + | chr8.1:53427384-53427403 | None:intergenic | 35.0% | |
| TTCTTCTATTGCATTCTGGT+TGG | - | chr8.1:53428814-53428833 | MS.gene007842:intron | 35.0% | |
| TTTCATTGTTCATTCTCAGC+AGG | - | chr8.1:53425867-53425886 | MS.gene007842:intron | 35.0% | |
| ! | AAGTCACTAGATTTTTCCCT+CGG | + | chr8.1:53426607-53426626 | None:intergenic | 35.0% |
| ! | ATGTATAAACAGGGAGGTTT+TGG | + | chr8.1:53429498-53429517 | None:intergenic | 35.0% |
| ! | CATGGCTTTTCGATCATAAT+GGG | - | chr8.1:53427548-53427567 | MS.gene007842:CDS | 35.0% |
| ! | GAAGACCAATAATCTGAAAC+AGG | + | chr8.1:53429118-53429137 | None:intergenic | 35.0% |
| ! | TCATGGCTTTTCGATCATAA+TGG | - | chr8.1:53427547-53427566 | MS.gene007842:CDS | 35.0% |
| ! | TGGACTGTTTTGTAAGTAGA+AGG | - | chr8.1:53426817-53426836 | MS.gene007842:intron | 35.0% |
| ! | TGGAGAAAACAACTTTTTGG+TGG | + | chr8.1:53428929-53428948 | None:intergenic | 35.0% |
| !! | TCTACTAGTGGGTTAAATAG+TGG | - | chr8.1:53428469-53428488 | MS.gene007842:intron | 35.0% |
| !! | TTCTCACGAAGTTTTATGCT+AGG | - | chr8.1:53427861-53427880 | MS.gene007842:intron | 35.0% |
| !!! | ACTTTTTGGTGGCGAAAATA+TGG | + | chr8.1:53428918-53428937 | None:intergenic | 35.0% |
| !!! | AGTACACCTTTTGGTTTGAA+AGG | - | chr8.1:53428384-53428403 | MS.gene007842:intron | 35.0% |
| !!! | GTACACCTTTTGGTTTGAAA+GGG | - | chr8.1:53428385-53428404 | MS.gene007842:intron | 35.0% |
| !!! | GTACACGTTTTTGGTTTGAA+AGG | - | chr8.1:53428349-53428368 | MS.gene007842:intron | 35.0% |
| AAATAAGAAGACGGGTCAAG+TGG | + | chr8.1:53427137-53427156 | None:intergenic | 40.0% | |
| AACCAAAAACGTGTACTCTC+AGG | + | chr8.1:53428345-53428364 | None:intergenic | 40.0% | |
| AACCTGGTATCCAAAAGCTT+CGG | - | chr8.1:53426493-53426512 | MS.gene007842:intron | 40.0% | |
| AAGAAGAAGAAGAGCGAAGA+AGG | + | chr8.1:53428983-53429002 | None:intergenic | 40.0% | |
| AAGTTGTGATAATTGGGTCG+TGG | + | chr8.1:53428622-53428641 | None:intergenic | 40.0% | |
| AATAAGAAGACGGGTCAAGT+GGG | + | chr8.1:53427136-53427155 | None:intergenic | 40.0% | |
| AATCTACAGTAACCAAGGGT+TGG | - | chr8.1:53429759-53429778 | MS.gene007842:CDS | 40.0% | |
| AATGCTGAAACCCAAGAACT+GGG | - | chr8.1:53429300-53429319 | MS.gene007842:intron | 40.0% | |
| ACCAAGCTTGAATCTACTAG+TGG | - | chr8.1:53428457-53428476 | MS.gene007842:intron | 40.0% | |
| ACTCTCCAAAAGGAGAATAG+AGG | + | chr8.1:53427259-53427278 | None:intergenic | 40.0% | |
| AGAGGAGCAGGTATAAAAAC+AGG | + | chr8.1:53427241-53427260 | None:intergenic | 40.0% | |
| AGAGGGTTCCTTATCTCTTT+AGG | - | chr8.1:53429684-53429703 | MS.gene007842:CDS | 40.0% | |
| AGATGGAGATAAGCCCTATT+TGG | - | chr8.1:53427020-53427039 | MS.gene007842:intron | 40.0% | |
| AGTAGATTCAAGCTTGGTAG+TGG | + | chr8.1:53428455-53428474 | None:intergenic | 40.0% | |
| ATGTCAATACAGCGAAAACG+TGG | - | chr8.1:53426519-53426538 | MS.gene007842:intron | 40.0% | |
| CATGGGTGCATTTGTAATTG+TGG | - | chr8.1:53426643-53426662 | MS.gene007842:CDS | 40.0% | |
| CCAAGCTTGAATCTACTAGT+GGG | - | chr8.1:53428458-53428477 | MS.gene007842:intron | 40.0% | |
| GAAGAGTTCTTATGACAAGG+TGG | + | chr8.1:53429085-53429104 | None:intergenic | 40.0% | |
| GAGGAGCAGGTATAAAAACA+GGG | + | chr8.1:53427240-53427259 | None:intergenic | 40.0% | |
| GAGTAGCGACTATATTGTGA+AGG | + | chr8.1:53429423-53429442 | None:intergenic | 40.0% | |
| GATGGAGATAAGCCCTATTT+GGG | - | chr8.1:53427021-53427040 | MS.gene007842:intron | 40.0% | |
| GCATGTTAAATCCATTGCAG+AGG | + | chr8.1:53429181-53429200 | None:intergenic | 40.0% | |
| GGAAATGAATCTAGTACGTG+TGG | + | chr8.1:53428263-53428282 | None:intergenic | 40.0% | |
| GTAGCGACTATATTGTGAAG+GGG | + | chr8.1:53429421-53429440 | None:intergenic | 40.0% | |
| GTATTTAGGAAGAGGAAGAG+TGG | + | chr8.1:53427323-53427342 | None:intergenic | 40.0% | |
| TAATGCTGAAACCCAAGAAC+TGG | - | chr8.1:53429299-53429318 | MS.gene007842:intron | 40.0% | |
| TAGATGCAAGGTAACTATCG+AGG | + | chr8.1:53428680-53428699 | None:intergenic | 40.0% | |
| TCCTGATACTCATCAATGCT+AGG | - | chr8.1:53429010-53429029 | MS.gene007842:CDS | 40.0% | |
| TCTTGACCTGTCAAGTTCAT+TGG | - | chr8.1:53429606-53429625 | MS.gene007842:intron | 40.0% | |
| TGAATGGATGGGTCTTAAGA+AGG | + | chr8.1:53428510-53428529 | None:intergenic | 40.0% | |
| TGACTTACCGCAAAAAGGAA+AGG | + | chr8.1:53426914-53426933 | None:intergenic | 40.0% | |
| TGCCTCTAACTTCCCAAATA+GGG | + | chr8.1:53427036-53427055 | None:intergenic | 40.0% | |
| TGGGTTTCAGCATTACAAGA+TGG | + | chr8.1:53429294-53429313 | None:intergenic | 40.0% | |
| TGTCTACTGTACAAGTCTCT+TGG | + | chr8.1:53428161-53428180 | None:intergenic | 40.0% | |
| TTCTCCATTATCCTCTGCAA+TGG | - | chr8.1:53429167-53429186 | MS.gene007842:intron | 40.0% | |
| TTGCCTCTAACTTCCCAAAT+AGG | + | chr8.1:53427037-53427056 | None:intergenic | 40.0% | |
| ! | ACCAAAAGGTGTACTCTCTA+AGG | + | chr8.1:53428379-53428398 | None:intergenic | 40.0% |
| ! | CAGGTTGAACAATTGTTAGG+AGG | - | chr8.1:53429323-53429342 | MS.gene007842:intron | 40.0% |
| ! | CCAAAAGGTGTACTCTCTAA+GGG | + | chr8.1:53428378-53428397 | None:intergenic | 40.0% |
| ! | GTTTTCTCCATCTTGACAGT+GGG | - | chr8.1:53428939-53428958 | MS.gene007842:intron | 40.0% |
| ! | TCGACTTTGAAGGTATGAGA+CGG | - | chr8.1:53428641-53428660 | MS.gene007842:intron | 40.0% |
| ! | TGTTTTCTCCATCTTGACAG+TGG | - | chr8.1:53428938-53428957 | MS.gene007842:intron | 40.0% |
| ! | TTGACATGATCCGAAGCTTT+TGG | + | chr8.1:53426506-53426525 | None:intergenic | 40.0% |
| !! | ACCTAGCATTGATGAGTATC+AGG | + | chr8.1:53429014-53429033 | None:intergenic | 40.0% |
| !! | ACTAGTGGGTTAAATAGTGG+TGG | - | chr8.1:53428472-53428491 | MS.gene007842:intron | 40.0% |
| !! | AGCCCATTGATTTGCCAATT+AGG | - | chr8.1:53429858-53429877 | MS.gene007842:CDS | 40.0% |
| !! | ATTCAAGCTTGGTAGTGGAA+AGG | + | chr8.1:53428450-53428469 | None:intergenic | 40.0% |
| !! | GCCCATTGATTTGCCAATTA+GGG | - | chr8.1:53429859-53429878 | MS.gene007842:CDS | 40.0% |
| !! | TAATAAGTGCTGAGGCCTTT+GGG | + | chr8.1:53427087-53427106 | None:intergenic | 40.0% |
| !! | TTAATAAGTGCTGAGGCCTT+TGG | + | chr8.1:53427088-53427107 | None:intergenic | 40.0% |
| !!! | GAGGTTTTGGAGTTAGAAAG+CGG | + | chr8.1:53429485-53429504 | None:intergenic | 40.0% |
| ACAATTGCGAATCACATCCG+AGG | - | chr8.1:53426587-53426606 | MS.gene007842:intron | 45.0% | |
| ACACGCCTGAAGGTTTATAG+CGG | - | chr8.1:53429809-53429828 | MS.gene007842:CDS | 45.0% | |
| ACGAGGATCTTCTTCGACAA+TGG | + | chr8.1:53425899-53425918 | None:intergenic | 45.0% | |
| AGCCCTATTTGGGAAGTTAG+AGG | - | chr8.1:53427031-53427050 | MS.gene007842:intron | 45.0% | |
| AGTGACTTATACACCCAGTG+TGG | - | chr8.1:53426619-53426638 | MS.gene007842:CDS | 45.0% | |
| AGTGGAAAAGGAGAAATGGG+AGG | + | chr8.1:53428872-53428891 | None:intergenic | 45.0% | |
| ATGCGTCTCCTTATACCCAA+AGG | - | chr8.1:53427069-53427088 | MS.gene007842:intron | 45.0% | |
| ATGGATGGGTCTTAAGAAGG+TGG | + | chr8.1:53428507-53428526 | None:intergenic | 45.0% | |
| CAAAAGGAGAATAGAGGAGC+AGG | + | chr8.1:53427253-53427272 | None:intergenic | 45.0% | |
| CAATTGCGAATCACATCCGA+GGG | - | chr8.1:53426588-53426607 | MS.gene007842:intron | 45.0% | |
| CAGAAAAGGTTGCTGTCAGT+GGG | - | chr8.1:53427967-53427986 | MS.gene007842:intron | 45.0% | |
| CATGGTGACTTACCGCAAAA+AGG | + | chr8.1:53426919-53426938 | None:intergenic | 45.0% | |
| CCCACTAGTAGATTCAAGCT+TGG | + | chr8.1:53428461-53428480 | None:intergenic | 45.0% | |
| CGACAACAAGGTGAATGGAT+GGG | + | chr8.1:53428521-53428540 | None:intergenic | 45.0% | |
| CTACCACCATCTGATGGTTT+CGG | - | chr8.1:53428697-53428716 | MS.gene007842:intron | 45.0% | |
| GAAAATATGGTGCAGGAAGC+CGG | + | chr8.1:53428905-53428924 | None:intergenic | 45.0% | |
| GAAAGTCCGAAACCATCAGA+TGG | + | chr8.1:53428706-53428725 | None:intergenic | 45.0% | |
| GAAGCCGGAAGTAATAACAG+TGG | + | chr8.1:53428890-53428909 | None:intergenic | 45.0% | |
| GAATGCAATAGAAGAACCGC+CGG | + | chr8.1:53428810-53428829 | None:intergenic | 45.0% | |
| GCGGTTCTTCTATTGCATTC+TGG | - | chr8.1:53428810-53428829 | MS.gene007842:intron | 45.0% | |
| GGCATCCCTTTCAAACCAAA+AGG | + | chr8.1:53428393-53428412 | None:intergenic | 45.0% | |
| GGGCATCAAAGTAGAAAGGT+TGG | + | chr8.1:53428562-53428581 | None:intergenic | 45.0% | |
| GGTTCAACACAGATGAAACG+AGG | + | chr8.1:53425916-53425935 | None:intergenic | 45.0% | |
| GTTATACCGGGCCTTGAAAT+CGG | + | chr8.1:53425945-53425964 | None:intergenic | 45.0% | |
| TATACACCCAGTGTGGACAT+GGG | - | chr8.1:53426626-53426645 | MS.gene007842:CDS | 45.0% | |
| TGATGGTTTCGGACTTTCAG+TGG | - | chr8.1:53428708-53428727 | MS.gene007842:intron | 45.0% | |
| TGCAAGGTAACTATCGAGGA+AGG | + | chr8.1:53428676-53428695 | None:intergenic | 45.0% | |
| TGCGGTAAGTCACCATGAAA+TGG | - | chr8.1:53426922-53426941 | MS.gene007842:intron | 45.0% | |
| TGTGATAATTGGGTCGTGGA+CGG | + | chr8.1:53428618-53428637 | None:intergenic | 45.0% | |
| TTATACACCCAGTGTGGACA+TGG | - | chr8.1:53426625-53426644 | MS.gene007842:CDS | 45.0% | |
| TTATACCGGGCCTTGAAATC+GGG | + | chr8.1:53425944-53425963 | None:intergenic | 45.0% | |
| TTCGTGGCATGCTTCCAAAA+GGG | - | chr8.1:53428105-53428124 | MS.gene007842:intron | 45.0% | |
| TTGCATCTACCACCATCTGA+TGG | - | chr8.1:53428691-53428710 | MS.gene007842:intron | 45.0% | |
| TTGCTGTCAGTGGGAAAAAG+AGG | - | chr8.1:53427976-53427995 | MS.gene007842:intron | 45.0% | |
| ! | AGAGGACCCAGAAGCTTTAT+CGG | - | chr8.1:53427994-53428013 | MS.gene007842:intron | 45.0% |
| ! | AGGACATTTGGAACACAACC+TGG | - | chr8.1:53426477-53426496 | MS.gene007842:CDS | 45.0% |
| ! | ATCAGATGGTGGTAGATGCA+AGG | + | chr8.1:53428692-53428711 | None:intergenic | 45.0% |
| ! | ATCCGAAGCTTTTGGATACC+AGG | + | chr8.1:53426498-53426517 | None:intergenic | 45.0% |
| ! | CCATCCATTCACCTTGTTGT+CGG | - | chr8.1:53428519-53428538 | MS.gene007842:intron | 45.0% |
| ! | CTGCTCCTCTATTCTCCTTT+TGG | - | chr8.1:53427251-53427270 | MS.gene007842:intron | 45.0% |
| ! | GGGCAGGTTGAACAATTGTT+AGG | - | chr8.1:53429320-53429339 | MS.gene007842:intron | 45.0% |
| ! | GTGGGTTAAATAGTGGTGGT+GGG | - | chr8.1:53428476-53428495 | MS.gene007842:intron | 45.0% |
| ! | GTTGAACTTACCCTCCCTTT+TGG | + | chr8.1:53428122-53428141 | None:intergenic | 45.0% |
| !! | AAGCTTGGTAGTGGAAAGGA+AGG | + | chr8.1:53428446-53428465 | None:intergenic | 45.0% |
| !! | AGCTTGGTAGTGGAAAGGAA+GGG | + | chr8.1:53428445-53428464 | None:intergenic | 45.0% |
| !! | AGTGGGTTAAATAGTGGTGG+TGG | - | chr8.1:53428475-53428494 | MS.gene007842:intron | 45.0% |
| !! | CCCTTAGAGAGTACACCTTT+TGG | - | chr8.1:53428375-53428394 | MS.gene007842:intron | 45.0% |
| !! | TGCCTGAGAGTACACGTTTT+TGG | - | chr8.1:53428340-53428359 | MS.gene007842:intron | 45.0% |
| AAATGCACCCATGTCCACAC+TGG | + | chr8.1:53426636-53426655 | None:intergenic | 50.0% | |
| AAGCTGCATAGACCAACCCT+TGG | + | chr8.1:53429774-53429793 | None:intergenic | 50.0% | |
| AATGCACCCATGTCCACACT+GGG | + | chr8.1:53426635-53426654 | None:intergenic | 50.0% | |
| AGTCCGAAACCATCAGATGG+TGG | + | chr8.1:53428703-53428722 | None:intergenic | 50.0% | |
| AGTGCAACCCACTGTCAAGA+TGG | + | chr8.1:53428949-53428968 | None:intergenic | 50.0% | |
| CAGGAATTCTGTTCTGCAGC+TGG | + | chr8.1:53428064-53428083 | None:intergenic | 50.0% | |
| CATGAAATGGCGTAGAGGCT+CGG | - | chr8.1:53426935-53426954 | MS.gene007842:intron | 50.0% | |
| CCGACAACAAGGTGAATGGA+TGG | + | chr8.1:53428522-53428541 | None:intergenic | 50.0% | |
| GACTCTATTCACACGCCTGA+AGG | - | chr8.1:53429799-53429818 | MS.gene007842:CDS | 50.0% | |
| GAGTATTCTGCAACCACTGC+AGG | - | chr8.1:53429204-53429223 | MS.gene007842:intron | 50.0% | |
| GATGAAGGGAACGTCACTGA+TGG | + | chr8.1:53425739-53425758 | None:intergenic | 50.0% | |
| GCAGAAAAGGTTGCTGTCAG+TGG | - | chr8.1:53427966-53427985 | MS.gene007842:intron | 50.0% | |
| GCGCTTCATGTGGATGATCT+GGG | + | chr8.1:53429835-53429854 | None:intergenic | 50.0% | |
| GGAGGAACCCAAGAACTGAA+TGG | - | chr8.1:53429341-53429360 | MS.gene007842:intron | 50.0% | |
| GTCACCATGAAATGGCGTAG+AGG | - | chr8.1:53426930-53426949 | MS.gene007842:intron | 50.0% | |
| GTTCAACCTGCCCAGTTCTT+GGG | + | chr8.1:53429313-53429332 | None:intergenic | 50.0% | |
| GTTCGTGGCATGCTTCCAAA+AGG | - | chr8.1:53428104-53428123 | MS.gene007842:intron | 50.0% | |
| TATACCGGGCCTTGAAATCG+GGG | + | chr8.1:53425943-53425962 | None:intergenic | 50.0% | |
| TGCGCTTCATGTGGATGATC+TGG | + | chr8.1:53429836-53429855 | None:intergenic | 50.0% | |
| TGCTGAGGCCTTTGGGTATA+AGG | + | chr8.1:53427080-53427099 | None:intergenic | 50.0% | |
| TGGCATGCTTCCAAAAGGGA+GGG | - | chr8.1:53428109-53428128 | MS.gene007842:intron | 50.0% | |
| TGGTTTCGGACTTTCAGTGG+CGG | - | chr8.1:53428711-53428730 | MS.gene007842:intron | 50.0% | |
| TGTTCAACCTGCCCAGTTCT+TGG | + | chr8.1:53429314-53429333 | None:intergenic | 50.0% | |
| ! | AAGGTTGGCGTCGAAAGGTT+TGG | + | chr8.1:53428547-53428566 | None:intergenic | 50.0% |
| ! | AAGGTTTGGAGCCGACAACA+AGG | + | chr8.1:53428533-53428552 | None:intergenic | 50.0% |
| ! | GTAGAAAGGTTGGCGTCGAA+AGG | + | chr8.1:53428552-53428571 | None:intergenic | 50.0% |
| ! | TGATGGTGAACCACACAGCA+AGG | + | chr8.1:53425722-53425741 | None:intergenic | 50.0% |
| ! | TGGTGGCGAAAATATGGTGC+AGG | + | chr8.1:53428912-53428931 | None:intergenic | 50.0% |
| !! | AAGGGTTGGTCTATGCAGCT+TGG | - | chr8.1:53429773-53429792 | MS.gene007842:CDS | 50.0% |
| !! | CGGAGGGCATCAAAGTAGAA+AGG | + | chr8.1:53428566-53428585 | None:intergenic | 50.0% |
| AAGAACCGCCGGACGTGAAT+CGG | + | chr8.1:53428799-53428818 | None:intergenic | 55.0% | |
| AATCGGCACAGCGGAGAAGA+TGG | + | chr8.1:53428782-53428801 | None:intergenic | 55.0% | |
| AGTGCCGCCGATAAAGCTTC+TGG | + | chr8.1:53428004-53428023 | None:intergenic | 55.0% | |
| CGAGCCTCTACGCCATTTCA+TGG | + | chr8.1:53426937-53426956 | None:intergenic | 55.0% | |
| CTGAAACCCAAGAACTGGGC+AGG | - | chr8.1:53429304-53429323 | MS.gene007842:intron | 55.0% | |
| CTGGGCCGCTATAAACCTTC+AGG | + | chr8.1:53429817-53429836 | None:intergenic | 55.0% | |
| GAACCTGAGCCCCGATTTCA+AGG | - | chr8.1:53425931-53425950 | MS.gene007842:intron | 55.0% | |
| GAAGAGCGAAGAAGGAGCAG+AGG | + | chr8.1:53428975-53428994 | None:intergenic | 55.0% | |
| GGAGCCGACAACAAGGTGAA+TGG | + | chr8.1:53428526-53428545 | None:intergenic | 55.0% | |
| GTCTCGACTGTCATACCACC+AGG | + | chr8.1:53428035-53428054 | None:intergenic | 55.0% | |
| GTGCCGCCGATAAAGCTTCT+GGG | + | chr8.1:53428003-53428022 | None:intergenic | 55.0% | |
| GTGGCATGCTTCCAAAAGGG+AGG | - | chr8.1:53428108-53428127 | MS.gene007842:intron | 55.0% | |
| ! | AAGCTTTATCGGCGGCACTC+AGG | - | chr8.1:53428005-53428024 | MS.gene007842:intron | 55.0% |
| ! | GGACCCAGAAGCTTTATCGG+CGG | - | chr8.1:53427997-53428016 | MS.gene007842:intron | 55.0% |
| ! | GTTGGTCTATGCAGCTTGGC+AGG | - | chr8.1:53429777-53429796 | MS.gene007842:CDS | 55.0% |
| TGAGCCCCGATTTCAAGGCC+CGG | - | chr8.1:53425936-53425955 | MS.gene007842:intron | 60.0% | |
| ! | ATGGGCTGCTGCGCTTCATG+TGG | + | chr8.1:53429845-53429864 | None:intergenic | 60.0% |
| ! | CAACCACTGCAGGCTTGCTC+TGG | - | chr8.1:53429214-53429233 | MS.gene007842:intron | 60.0% |
| AGGCCAGAGCAAGCCTGCAG+TGG | + | chr8.1:53429220-53429239 | None:intergenic | 65.0% | |
| CCGGACGTGAATCGGCACAG+CGG | + | chr8.1:53428791-53428810 | None:intergenic | 65.0% | |
| GGGCCTTGAAATCGGGGCTC+AGG | + | chr8.1:53425937-53425956 | None:intergenic | 65.0% | |
| !! | CCGCTGTGCCGATTCACGTC+CGG | - | chr8.1:53428788-53428807 | MS.gene007842:intron | 65.0% |
| !! | CTGTGCCGATTCACGTCCGG+CGG | - | chr8.1:53428791-53428810 | MS.gene007842:intron | 65.0% |
| CGGCACTCAGGTCGACCTGG+TGG | - | chr8.1:53428017-53428036 | MS.gene007842:intron | 70.0% | |
| CGGCGGCACTCAGGTCGACC+TGG | - | chr8.1:53428014-53428033 | MS.gene007842:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 53425715 | 53429907 | 53425715 | ID=MS.gene007842 |
| chr8.1 | mRNA | 53425715 | 53429907 | 53425715 | ID=MS.gene007842.t1;Parent=MS.gene007842 |
| chr8.1 | exon | 53429665 | 53429907 | 53429665 | ID=MS.gene007842.t1.exon1;Parent=MS.gene007842.t1 |
| chr8.1 | CDS | 53429665 | 53429907 | 53429665 | ID=cds.MS.gene007842.t1;Parent=MS.gene007842.t1 |
| chr8.1 | exon | 53428958 | 53429143 | 53428958 | ID=MS.gene007842.t1.exon2;Parent=MS.gene007842.t1 |
| chr8.1 | CDS | 53428958 | 53429143 | 53428958 | ID=cds.MS.gene007842.t1;Parent=MS.gene007842.t1 |
| chr8.1 | exon | 53427492 | 53427662 | 53427492 | ID=MS.gene007842.t1.exon3;Parent=MS.gene007842.t1 |
| chr8.1 | CDS | 53427492 | 53427662 | 53427492 | ID=cds.MS.gene007842.t1;Parent=MS.gene007842.t1 |
| chr8.1 | exon | 53426591 | 53426664 | 53426591 | ID=MS.gene007842.t1.exon4;Parent=MS.gene007842.t1 |
| chr8.1 | CDS | 53426591 | 53426664 | 53426591 | ID=cds.MS.gene007842.t1;Parent=MS.gene007842.t1 |
| chr8.1 | exon | 53426297 | 53426497 | 53426297 | ID=MS.gene007842.t1.exon5;Parent=MS.gene007842.t1 |
| chr8.1 | CDS | 53426297 | 53426497 | 53426297 | ID=cds.MS.gene007842.t1;Parent=MS.gene007842.t1 |
| chr8.1 | exon | 53425715 | 53425823 | 53425715 | ID=MS.gene007842.t1.exon6;Parent=MS.gene007842.t1 |
| chr8.1 | CDS | 53425715 | 53425823 | 53425715 | ID=cds.MS.gene007842.t1;Parent=MS.gene007842.t1 |
| Gene Sequence |
| Protein sequence |
