Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012865.t1 | XP_013461794.1 | 96.7 | 522 | 17 | 0 | 35 | 556 | 33 | 554 | 6.60E-292 | 1012.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012865.t1 | O04472 | 63.1 | 521 | 182 | 3 | 44 | 555 | 21 | 540 | 1.5e-199 | 697.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012865.t1 | A0A072V1F4 | 96.7 | 522 | 17 | 0 | 35 | 556 | 33 | 554 | 4.8e-292 | 1012.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene70604 | MS.gene012865 | PPI |
| MS.gene022275 | MS.gene012865 | PPI |
| MS.gene25932 | MS.gene012865 | PPI |
| MS.gene86930 | MS.gene012865 | PPI |
| MS.gene033221 | MS.gene012865 | PPI |
| MS.gene074377 | MS.gene012865 | PPI |
| MS.gene012865 | MS.gene91317 | PPI |
| MS.gene012865 | MS.gene60344 | PPI |
| MS.gene012865 | MS.gene71606 | PPI |
| MS.gene012865 | MS.gene96701 | PPI |
| MS.gene56947 | MS.gene012865 | PPI |
| MS.gene012865 | MS.gene43290 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012865.t1 | MTR_3g103230 | 96.583 | 556 | 17 | 1 | 1 | 556 | 1 | 554 | 0.0 | 1101 |
| MS.gene012865.t1 | MTR_5g022110 | 73.201 | 556 | 140 | 1 | 1 | 556 | 1 | 547 | 0.0 | 832 |
| MS.gene012865.t1 | MTR_8g063220 | 61.568 | 523 | 196 | 2 | 37 | 556 | 13 | 533 | 0.0 | 679 |
| MS.gene012865.t1 | MTR_3g078270 | 59.429 | 525 | 209 | 2 | 35 | 556 | 9 | 532 | 0.0 | 662 |
| MS.gene012865.t1 | MTR_4g106750 | 58.476 | 525 | 215 | 1 | 35 | 556 | 8 | 532 | 0.0 | 646 |
| MS.gene012865.t1 | MTR_5g035180 | 56.952 | 525 | 221 | 3 | 36 | 556 | 15 | 538 | 0.0 | 632 |
| MS.gene012865.t1 | MTR_1g106085 | 58.058 | 515 | 210 | 3 | 44 | 555 | 15 | 526 | 0.0 | 612 |
| MS.gene012865.t1 | MTR_4g106750 | 58.091 | 482 | 199 | 1 | 78 | 556 | 2 | 483 | 0.0 | 583 |
| MS.gene012865.t1 | MTR_8g086520 | 52.896 | 518 | 235 | 4 | 42 | 554 | 9 | 522 | 0.0 | 571 |
| MS.gene012865.t1 | MTR_2g016460 | 52.874 | 522 | 239 | 3 | 36 | 554 | 5 | 522 | 0.0 | 568 |
| MS.gene012865.t1 | MTR_3g080390 | 51.644 | 517 | 244 | 3 | 42 | 554 | 4 | 518 | 0.0 | 547 |
| MS.gene012865.t1 | MTR_8g086520 | 53.540 | 452 | 209 | 1 | 42 | 493 | 9 | 459 | 6.68e-179 | 513 |
| MS.gene012865.t1 | MTR_1g021120 | 49.615 | 520 | 252 | 4 | 41 | 555 | 32 | 546 | 9.71e-172 | 498 |
| MS.gene012865.t1 | MTR_8g086520 | 54.847 | 392 | 177 | 0 | 42 | 433 | 9 | 400 | 8.37e-161 | 464 |
| MS.gene012865.t1 | MTR_4g106750 | 58.158 | 380 | 153 | 2 | 183 | 556 | 1 | 380 | 1.84e-157 | 455 |
| MS.gene012865.t1 | MTR_8g086520 | 53.086 | 405 | 181 | 4 | 155 | 554 | 6 | 406 | 1.07e-150 | 439 |
| MS.gene012865.t1 | MTR_2g084895 | 33.589 | 521 | 303 | 6 | 70 | 553 | 164 | 678 | 6.65e-92 | 296 |
| MS.gene012865.t1 | MTR_8g068550 | 33.141 | 519 | 304 | 8 | 71 | 553 | 244 | 755 | 1.29e-90 | 295 |
| MS.gene012865.t1 | MTR_5g032020 | 34.496 | 516 | 295 | 8 | 70 | 549 | 185 | 693 | 5.53e-89 | 289 |
| MS.gene012865.t1 | MTR_2g103510 | 29.371 | 572 | 351 | 11 | 8 | 553 | 47 | 591 | 2.95e-84 | 274 |
| MS.gene012865.t1 | MTR_4g055290 | 32.054 | 521 | 306 | 7 | 70 | 553 | 171 | 680 | 2.71e-82 | 271 |
| MS.gene012865.t1 | MTR_8g086535 | 63.636 | 99 | 36 | 0 | 335 | 433 | 18 | 116 | 3.85e-34 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012865.t1 | AT1G65550 | 62.571 | 529 | 187 | 4 | 36 | 555 | 14 | 540 | 0.0 | 722 |
| MS.gene012865.t1 | AT5G62890 | 59.238 | 525 | 211 | 1 | 35 | 556 | 8 | 532 | 0.0 | 657 |
| MS.gene012865.t1 | AT5G62890 | 59.238 | 525 | 211 | 1 | 35 | 556 | 8 | 532 | 0.0 | 657 |
| MS.gene012865.t1 | AT5G62890 | 59.238 | 525 | 211 | 1 | 35 | 556 | 8 | 532 | 0.0 | 657 |
| MS.gene012865.t1 | AT1G60030 | 59.302 | 516 | 207 | 1 | 44 | 556 | 23 | 538 | 0.0 | 651 |
| MS.gene012865.t1 | AT5G49990 | 58.767 | 519 | 211 | 1 | 41 | 556 | 10 | 528 | 0.0 | 621 |
| MS.gene012865.t1 | AT5G49990 | 58.767 | 519 | 211 | 1 | 41 | 556 | 10 | 528 | 0.0 | 621 |
| MS.gene012865.t1 | AT5G49990 | 58.767 | 519 | 211 | 1 | 41 | 556 | 10 | 528 | 0.0 | 621 |
| MS.gene012865.t1 | AT5G49990 | 58.767 | 519 | 211 | 1 | 41 | 556 | 10 | 528 | 0.0 | 621 |
| MS.gene012865.t1 | AT1G10540 | 55.311 | 546 | 227 | 6 | 18 | 555 | 2 | 538 | 0.0 | 613 |
| MS.gene012865.t1 | AT1G49960 | 56.809 | 514 | 219 | 1 | 45 | 555 | 12 | 525 | 0.0 | 593 |
| MS.gene012865.t1 | AT5G62890 | 61.148 | 453 | 173 | 1 | 35 | 484 | 8 | 460 | 0.0 | 584 |
| MS.gene012865.t1 | AT2G34190 | 52.490 | 522 | 241 | 3 | 36 | 554 | 5 | 522 | 0.0 | 568 |
| MS.gene012865.t1 | AT2G05760 | 49.710 | 517 | 254 | 3 | 42 | 554 | 4 | 518 | 0.0 | 538 |
| MS.gene012865.t1 | AT5G25420 | 55.809 | 439 | 125 | 6 | 36 | 474 | 26 | 395 | 2.35e-167 | 481 |
| MS.gene012865.t1 | AT2G26510 | 47.619 | 525 | 267 | 3 | 35 | 554 | 26 | 547 | 5.65e-165 | 480 |
| MS.gene012865.t1 | AT1G10540 | 55.838 | 394 | 164 | 4 | 18 | 408 | 2 | 388 | 4.52e-154 | 447 |
| MS.gene012865.t1 | AT2G26510 | 49.451 | 364 | 184 | 0 | 45 | 408 | 36 | 399 | 7.89e-117 | 352 |
| MS.gene012865.t1 | AT2G26510 | 48.718 | 351 | 180 | 0 | 45 | 395 | 36 | 386 | 1.84e-109 | 334 |
| MS.gene012865.t1 | AT2G27810 | 30.084 | 595 | 366 | 10 | 1 | 553 | 115 | 701 | 1.41e-79 | 264 |
| MS.gene012865.t1 | AT2G27810 | 28.964 | 618 | 367 | 9 | 1 | 553 | 115 | 725 | 2.19e-77 | 259 |
| MS.gene012865.t1 | AT4G38050 | 31.667 | 540 | 320 | 8 | 53 | 553 | 175 | 704 | 2.36e-77 | 258 |
| MS.gene012865.t1 | AT2G27810 | 31.799 | 478 | 301 | 5 | 1 | 456 | 115 | 589 | 6.55e-71 | 238 |
| MS.gene012865.t1 | AT2G27810 | 31.787 | 431 | 269 | 5 | 1 | 409 | 115 | 542 | 3.75e-61 | 211 |
Find 134 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCTTGGTTGCTTTCATTT+TGG | 0.169248 | 3.3:+85315863 | MS.gene012865:CDS |
| ACATTTCTTCAATCTTTATT+TGG | 0.205778 | 3.3:+85313533 | MS.gene012865:CDS |
| CAGAGTACGTTGTTTGTTTC+CGG | 0.207698 | 3.3:+85313503 | MS.gene012865:CDS |
| TTATGGGATTCTTGGGATTA+TGG | 0.208045 | 3.3:+85313835 | MS.gene012865:CDS |
| TTTCAGAACCAAATTTGTTT+TGG | 0.241303 | 3.3:+85315601 | MS.gene012865:CDS |
| TGAGAAGCCCAAAACAAATT+TGG | 0.250863 | 3.3:-85315609 | None:intergenic |
| GCATTATACTGTGTATTCTT+TGG | 0.261773 | 3.3:+85315423 | MS.gene012865:CDS |
| CCAAATGGTTATGGGATTCT+TGG | 0.270090 | 3.3:+85313827 | MS.gene012865:CDS |
| TCATAAAACCAGCTGATATC+TGG | 0.294816 | 3.3:-85315153 | None:intergenic |
| GGCATGTTTGGTTCTGTAAC+AGG | 0.296118 | 3.3:+85314983 | MS.gene012865:CDS |
| TCTTTGCTCAATGGCATGTT+TGG | 0.302794 | 3.3:+85314971 | MS.gene012865:CDS |
| GTTAGAAGCAATGAATTCTA+TGG | 0.305839 | 3.3:+85315972 | MS.gene012865:CDS |
| GCTTGAACAGCTGACATAAT+TGG | 0.308881 | 3.3:-85313602 | None:intergenic |
| GGAAGTCCTACCTTCAACTA+TGG | 0.318637 | 3.3:+85314630 | MS.gene012865:CDS |
| TGCATGTTTCCAAATGGTTA+TGG | 0.320849 | 3.3:+85313818 | MS.gene012865:CDS |
| AACTATTGAGATTACAGAAT+TGG | 0.325604 | 3.3:-85315580 | None:intergenic |
| AACTATAGTTGTTCCTCAAA+TGG | 0.329633 | 3.3:+85313356 | MS.gene012865:CDS |
| GCTTCCAGCACTACTTGTTA+TGG | 0.334174 | 3.3:+85314134 | MS.gene012865:CDS |
| CAGGGAAAACGCTGGACTAT+TGG | 0.360278 | 3.3:+85315099 | MS.gene012865:intron |
| TATGCAGCTTCTGCAGGTCT+TGG | 0.365022 | 3.3:+85315551 | MS.gene012865:intron |
| GCATGTTTCCAAATGGTTAT+GGG | 0.366673 | 3.3:+85313819 | MS.gene012865:CDS |
| GGACTTGGTCTCTATCATCT+TGG | 0.375669 | 3.3:+85313915 | MS.gene012865:CDS |
| CAAATGGTTATGGGATTCTT+GGG | 0.379964 | 3.3:+85313828 | MS.gene012865:CDS |
| TGGGAGAAGTTCAGTATCTA+TGG | 0.388930 | 3.3:+85315942 | MS.gene012865:CDS |
| CCAGGTAATTGCTCTTTAGC+TGG | 0.392454 | 3.3:-85313037 | None:intergenic |
| TCTGTTATCAGCCGCGGAAC+TGG | 0.392882 | 3.3:+85314841 | MS.gene012865:CDS |
| TCTTTAGCTGGGTGTGCTAC+TGG | 0.394583 | 3.3:-85313025 | None:intergenic |
| TTCCATACCTTTGCCAATCA+TGG | 0.396450 | 3.3:+85315398 | MS.gene012865:CDS |
| AGGAACATGCAGGTCCTAGA+TGG | 0.397588 | 3.3:+85315687 | MS.gene012865:CDS |
| CGCCAAAGAGACTGGTTAAA+GGG | 0.402830 | 3.3:-85316027 | None:intergenic |
| ACACACAATGGTGGCTGCCT+TGG | 0.409130 | 3.3:+85315848 | MS.gene012865:CDS |
| CAGTATAATGCTGCCATGAT+TGG | 0.416838 | 3.3:-85315411 | None:intergenic |
| GAGATTCACTCAGACAATTA+CGG | 0.420412 | 3.3:+85313770 | MS.gene012865:intron |
| CAGCATTACATTCTGACTCT+TGG | 0.422869 | 3.3:+85313315 | MS.gene012865:CDS |
| CTGATATCTGGATGACTCTT+CGG | 0.422907 | 3.3:-85315141 | None:intergenic |
| CCAAGAATCCCATAACCATT+TGG | 0.423135 | 3.3:-85313827 | None:intergenic |
| CGATTGCCAACTGTAGTTGT+TGG | 0.425209 | 3.3:+85313560 | MS.gene012865:CDS |
| CAACAACTACAGTTGGCAAT+CGG | 0.429632 | 3.3:-85313559 | None:intergenic |
| GTCCCTTATGTAACATTCAC+TGG | 0.434961 | 3.3:+85313894 | MS.gene012865:CDS |
| TGAATATTATCAAGTAAAAC+AGG | 0.437037 | 3.3:+85315667 | MS.gene012865:CDS |
| AGATTCACTCAGACAATTAC+GGG | 0.439047 | 3.3:+85313771 | MS.gene012865:CDS |
| ATTTGAGGAACAACTATAGT+TGG | 0.440677 | 3.3:-85313354 | None:intergenic |
| AAGTACACATCGACCTCATA+AGG | 0.441893 | 3.3:-85313650 | None:intergenic |
| CACGGGCTGCATCATCTTCA+CGG | 0.441998 | 3.3:-85315899 | None:intergenic |
| AAAAGTTTCCCCATAGTTGA+AGG | 0.447309 | 3.3:-85314640 | None:intergenic |
| TTGGGCTTCTCATTCTTCCT+CGG | 0.448057 | 3.3:+85315620 | MS.gene012865:CDS |
| GGAGTAGCTTCTTTGCTCAA+TGG | 0.454916 | 3.3:+85314962 | MS.gene012865:CDS |
| CATATTTGCATGTAGTCTAC+TGG | 0.455099 | 3.3:+85314769 | MS.gene012865:intron |
| GAAACATGCACTTATAATCA+AGG | 0.460770 | 3.3:-85313805 | None:intergenic |
| ACATTGTTTCCACCCATTTG+AGG | 0.466873 | 3.3:-85313369 | None:intergenic |
| TCAGATAATCTCACCCATCT+AGG | 0.467136 | 3.3:-85315701 | None:intergenic |
| CTTCCCCATTGAAAAGGATA+AGG | 0.469030 | 3.3:-85314612 | None:intergenic |
| ACTATAGTTGTTCCTCAAAT+GGG | 0.470243 | 3.3:+85313357 | MS.gene012865:CDS |
| GTCTTATTAGTTCTGCTCCA+TGG | 0.472828 | 3.3:+85314419 | MS.gene012865:CDS |
| AGTCCAGTGAATGTTACATA+AGG | 0.473008 | 3.3:-85313897 | None:intergenic |
| TTATCAGCCGCGGAACTGGC+TGG | 0.474227 | 3.3:+85314845 | MS.gene012865:CDS |
| CTGGCAACATGTGTTGAAGT+TGG | 0.474802 | 3.3:+85314111 | MS.gene012865:CDS |
| GGAAATAATGCTGGCGGTGG+CGG | 0.475933 | 3.3:+85312938 | MS.gene012865:CDS |
| AATGCTGGCGGTGGCGGTGA+TGG | 0.476328 | 3.3:+85312944 | MS.gene012865:CDS |
| AAAGAGACTGGTTAAAGGGC+TGG | 0.481224 | 3.3:-85316023 | None:intergenic |
| TATAAGTGCATGTTTCCAAA+TGG | 0.482279 | 3.3:+85313812 | MS.gene012865:CDS |
| TTGGGATATGCAGCTTCTGC+AGG | 0.486729 | 3.3:+85315545 | MS.gene012865:intron |
| CAGCCGCGGAACTGGCTGGC+TGG | 0.489535 | 3.3:+85314849 | MS.gene012865:CDS |
| TTGAAGAAATGTGCTTAGTC+CGG | 0.498808 | 3.3:-85313522 | None:intergenic |
| CAACATATGGCTCAAAATGA+AGG | 0.499264 | 3.3:+85312899 | None:intergenic |
| GAAGGTGGAGATGGTGGGAA+TGG | 0.499508 | 3.3:+85312917 | MS.gene012865:CDS |
| AACAACTACAGTTGGCAATC+GGG | 0.501292 | 3.3:-85313558 | None:intergenic |
| GAAGTCCTACCTTCAACTAT+GGG | 0.504820 | 3.3:+85314631 | MS.gene012865:CDS |
| TGGCAACATGTGTTGAAGTT+GGG | 0.508157 | 3.3:+85314112 | MS.gene012865:CDS |
| GTAGGACTTCCCCATTGAAA+AGG | 0.513415 | 3.3:-85314618 | None:intergenic |
| CAGACAATTACGGGAATACA+AGG | 0.519299 | 3.3:+85313780 | MS.gene012865:CDS |
| AAAACCATAACAAGTAGTGC+TGG | 0.520610 | 3.3:-85314138 | None:intergenic |
| TGGAAAACAAAACTGCAAAT+CGG | 0.523327 | 3.3:-85314297 | None:intergenic |
| GTCCAGTGAATGTTACATAA+GGG | 0.527838 | 3.3:-85313896 | None:intergenic |
| GCTGGCGGTGGCGGTGATGG+CGG | 0.532310 | 3.3:+85312947 | MS.gene012865:CDS |
| CAAAATGAAGGTGGAGATGG+TGG | 0.533623 | 3.3:+85312911 | MS.gene012865:CDS |
| CAGGTAATTGCTCTTTAGCT+GGG | 0.537966 | 3.3:-85313036 | None:intergenic |
| TATGTAACATTCACTGGACT+TGG | 0.538442 | 3.3:+85313900 | MS.gene012865:CDS |
| ACTGCAAATCGGTCAAATGT+AGG | 0.543952 | 3.3:-85314286 | None:intergenic |
| GATTATGGAGAAATGCTGTC+AGG | 0.547810 | 3.3:+85313850 | MS.gene012865:CDS |
| TGTTTCAACTCAGTTGGAGA+AGG | 0.550204 | 3.3:+85313469 | MS.gene012865:intron |
| ATTTCAATCCACTGTCATCA+CGG | 0.551720 | 3.3:-85315917 | None:intergenic |
| GGTGGGAATGGAAATAATGC+TGG | 0.552918 | 3.3:+85312929 | MS.gene012865:CDS |
| CTGATAACAGAAGGTGGCAC+GGG | 0.553647 | 3.3:-85314829 | None:intergenic |
| AAATACTAACGCCAAGGTGG+AGG | 0.555562 | 3.3:-85313082 | None:intergenic |
| AGAGTCATCCAGATATCAGC+TGG | 0.558329 | 3.3:+85315145 | MS.gene012865:CDS |
| GTTTCCCCATAGTTGAAGGT+AGG | 0.565886 | 3.3:-85314636 | None:intergenic |
| GGAACATGCAGGTCCTAGAT+GGG | 0.568067 | 3.3:+85315688 | MS.gene012865:CDS |
| AGTTGCCGCACTGACCGTGC+TGG | 0.569095 | 3.3:+85314397 | MS.gene012865:CDS |
| AACTCAGTTGGAGAAGGCCA+AGG | 0.569555 | 3.3:+85313475 | MS.gene012865:intron |
| TTTCAATCCACTGTCATCAC+GGG | 0.569622 | 3.3:-85315916 | None:intergenic |
| GGACAACACAAAGTGGGCTA+AGG | 0.572132 | 3.3:-85313875 | None:intergenic |
| ACGGGCTGCATCATCTTCAC+GGG | 0.573702 | 3.3:-85315898 | None:intergenic |
| TGCCATGATTGGCAAAGGTA+TGG | 0.573927 | 3.3:-85315400 | None:intergenic |
| CAAGTAAAACAGGAACATGC+AGG | 0.574966 | 3.3:+85315677 | MS.gene012865:CDS |
| TTCATATACAGATCCTTATG+AGG | 0.584344 | 3.3:+85313637 | MS.gene012865:CDS |
| CTATTGGCATTGACAAGAGT+GGG | 0.584625 | 3.3:+85315115 | MS.gene012865:CDS |
| CAAGAGTCAGAATGTAATGC+TGG | 0.586166 | 3.3:-85313314 | None:intergenic |
| CCAGCTAAAGAGCAATTACC+TGG | 0.592250 | 3.3:+85313037 | MS.gene012865:CDS |
| ATAGTTGTTCCTCAAATGGG+TGG | 0.593855 | 3.3:+85313360 | MS.gene012865:CDS |
| ACTATTGGCATTGACAAGAG+TGG | 0.602157 | 3.3:+85315114 | MS.gene012865:CDS |
| AATGGAAATAATGCTGGCGG+TGG | 0.605700 | 3.3:+85312935 | MS.gene012865:CDS |
| GCTCAAAATGAAGGTGGAGA+TGG | 0.606475 | 3.3:+85312908 | MS.gene012865:CDS |
| AAATAACCATGCACTTGCAA+TGG | 0.607464 | 3.3:-85314317 | None:intergenic |
| CAACGTACTCTGAATCACCT+TGG | 0.609774 | 3.3:-85313492 | None:intergenic |
| GCTGATAACAGAAGGTGGCA+CGG | 0.610840 | 3.3:-85314830 | None:intergenic |
| ATGACAGTGGATTGAAATGG+TGG | 0.613573 | 3.3:+85315922 | MS.gene012865:CDS |
| CATATTCGCTTCACACACAA+TGG | 0.614250 | 3.3:+85315836 | MS.gene012865:CDS |
| AATGCTGCCATGATTGGCAA+AGG | 0.615074 | 3.3:-85315405 | None:intergenic |
| GCATAAATAGTCCTCCACCT+TGG | 0.616612 | 3.3:+85313071 | MS.gene012865:CDS |
| TAATATTCAGTGAAATATTG+CGG | 0.617054 | 3.3:-85315653 | None:intergenic |
| CCACCTTCTGTTATCAGCCG+CGG | 0.618128 | 3.3:+85314835 | MS.gene012865:CDS |
| TATGAACCAACAACTACAGT+TGG | 0.620524 | 3.3:-85313566 | None:intergenic |
| ACATAAGGGACAACACAAAG+TGG | 0.621509 | 3.3:-85313882 | None:intergenic |
| CTATCATCTTGGTTTCCCTG+TGG | 0.623629 | 3.3:+85313926 | MS.gene012865:CDS |
| GTGATGACAGTGGATTGAAA+TGG | 0.630250 | 3.3:+85315919 | MS.gene012865:CDS |
| TTTATGCAATATTGAACACC+AGG | 0.630678 | 3.3:-85313055 | None:intergenic |
| ATCCAAAATGAAAGCAACCA+AGG | 0.632215 | 3.3:-85315865 | None:intergenic |
| GTTCCGCGGCTGATAACAGA+AGG | 0.632250 | 3.3:-85314838 | None:intergenic |
| CATATGGCTCAAAATGAAGG+TGG | 0.633129 | 3.3:+85312902 | None:intergenic |
| TGAAAATACTAACGCCAAGG+TGG | 0.634498 | 3.3:-85313085 | None:intergenic |
| CATAAGGGACAACACAAAGT+GGG | 0.647050 | 3.3:-85313881 | None:intergenic |
| TTACCAGCCAGCCAGTTCCG+CGG | 0.648530 | 3.3:-85314852 | None:intergenic |
| TGACAGTGGATTGAAATGGT+GGG | 0.657332 | 3.3:+85315923 | MS.gene012865:CDS |
| CCGCGGCTGATAACAGAAGG+TGG | 0.657716 | 3.3:-85314835 | None:intergenic |
| GCTTATTTCAGGGAAAACGC+TGG | 0.661694 | 3.3:+85315091 | MS.gene012865:intron |
| ATTCGCTTCACACACAATGG+TGG | 0.666772 | 3.3:+85315839 | MS.gene012865:CDS |
| AAAATGAAGGTGGAGATGGT+GGG | 0.674832 | 3.3:+85312912 | MS.gene012865:CDS |
| GATGCAGCCCGTGATGACAG+TGG | 0.686042 | 3.3:+85315909 | MS.gene012865:CDS |
| AAGTCCTACCTTCAACTATG+GGG | 0.694616 | 3.3:+85314632 | MS.gene012865:CDS |
| TAAGACCAGCACGGTCAGTG+CGG | 0.712401 | 3.3:-85314402 | None:intergenic |
| GGGAATGGAAATAATGCTGG+CGG | 0.720922 | 3.3:+85312932 | MS.gene012865:CDS |
| CAGAACTAATAAGACCAGCA+CGG | 0.727218 | 3.3:-85314411 | None:intergenic |
| ATTGCGGTATTGAGACACCG+AGG | 0.806570 | 3.3:-85315637 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCAAATTAAAAAAGTTG+AGG | - | chr3.3:85313256-85313275 | None:intergenic | 15.0% |
| !! | AATCAAAACAAAAAATATTG+TGG | - | chr3.3:85314730-85314749 | None:intergenic | 15.0% |
| !! | AGAATAACAACATTAAAAAT+AGG | - | chr3.3:85315315-85315334 | None:intergenic | 15.0% |
| !! | TTTGTATTATAAGCTATAAA+CGG | + | chr3.3:85314510-85314529 | MS.gene012865:intron | 15.0% |
| !!! | GATTTATTTTTCTTAAATTC+TGG | + | chr3.3:85314196-85314215 | MS.gene012865:intron | 15.0% |
| !! | AATCAGCATTAAAATAAACA+TGG | - | chr3.3:85313724-85313743 | None:intergenic | 20.0% |
| !! | ACAGTGATTGAAAAAATTAA+AGG | - | chr3.3:85314086-85314105 | None:intergenic | 20.0% |
| !! | ACATTTCTTCAATCTTTATT+TGG | + | chr3.3:85313533-85313552 | MS.gene012865:CDS | 20.0% |
| !! | AGTGATTGAAAAAATTAAAG+GGG | - | chr3.3:85314084-85314103 | None:intergenic | 20.0% |
| !! | CAGTGATTGAAAAAATTAAA+GGG | - | chr3.3:85314085-85314104 | None:intergenic | 20.0% |
| !! | TAATATTCAGTGAAATATTG+CGG | - | chr3.3:85315656-85315675 | None:intergenic | 20.0% |
| !! | TACAAAATTCGATTCAAAAA+AGG | - | chr3.3:85314496-85314515 | None:intergenic | 20.0% |
| !! | TGAAAATGCATTGAAAAATT+AGG | - | chr3.3:85315795-85315814 | None:intergenic | 20.0% |
| !! | TGAATATTATCAAGTAAAAC+AGG | + | chr3.3:85315667-85315686 | MS.gene012865:CDS | 20.0% |
| !!! | ATGATTTTCTTTTCTGTATT+TGG | + | chr3.3:85315172-85315191 | MS.gene012865:CDS | 20.0% |
| !!! | CATTATCTTTGTAAGATTTT+TGG | + | chr3.3:85315471-85315490 | MS.gene012865:intron | 20.0% |
| !!! | TATGTTTGTTTGTTTGTTTT+TGG | + | chr3.3:85313196-85313215 | MS.gene012865:intron | 20.0% |
| ! | AACTATTGAGATTACAGAAT+TGG | - | chr3.3:85315583-85315602 | None:intergenic | 25.0% |
| ! | AATTCAGCTTCTATAAGTTA+AGG | + | chr3.3:85314022-85314041 | MS.gene012865:intron | 25.0% |
| ! | ACTTATGATTGAATTTCATG+TGG | + | chr3.3:85314919-85314938 | MS.gene012865:intron | 25.0% |
| ! | ATTGATTGCGTTATTTATAC+AGG | + | chr3.3:85314580-85314599 | MS.gene012865:intron | 25.0% |
| ! | CTACACTTTGTAATTATTTC+TGG | + | chr3.3:85314881-85314900 | MS.gene012865:intron | 25.0% |
| ! | TGAAATCATTTCACATTTGT+CGG | - | chr3.3:85313164-85313183 | None:intergenic | 25.0% |
| ! | TGACAAGATTTATGTAACTT+GGG | + | chr3.3:85315527-85315546 | MS.gene012865:intron | 25.0% |
| ! | TTCAGATTTGACATTTCTAA+AGG | + | chr3.3:85315282-85315301 | MS.gene012865:intron | 25.0% |
| ! | TTGACAAGATTTATGTAACT+TGG | + | chr3.3:85315526-85315545 | MS.gene012865:intron | 25.0% |
| ! | TTGATTGCGTTATTTATACA+GGG | + | chr3.3:85314581-85314600 | MS.gene012865:intron | 25.0% |
| !! | ATCACGAAATTTTCAACAAT+TGG | - | chr3.3:85315734-85315753 | None:intergenic | 25.0% |
| !! | ATTTTCCTTATCCTTTTCAA+TGG | + | chr3.3:85314607-85314626 | MS.gene012865:CDS | 25.0% |
| !! | TTTTATGACAAAGAGATATG+AGG | - | chr3.3:85315033-85315052 | None:intergenic | 25.0% |
| !! | TTTTCCTTATCCTTTTCAAT+GGG | + | chr3.3:85314608-85314627 | MS.gene012865:CDS | 25.0% |
| !! | TTTTCTGTATTTGGTATGAT+AGG | + | chr3.3:85315181-85315200 | MS.gene012865:intron | 25.0% |
| !!! | ATGCTGATTTGATTCATATA+TGG | + | chr3.3:85313735-85313754 | MS.gene012865:intron | 25.0% |
| !!! | TCTTTGTAAGATTTTTGGTT+AGG | + | chr3.3:85315476-85315495 | MS.gene012865:intron | 25.0% |
| !!! | TGCTGATTTGATTCATATAT+GGG | + | chr3.3:85313736-85313755 | MS.gene012865:intron | 25.0% |
| !!! | TGTAATTATTTCTGGAATCA+TGG | + | chr3.3:85314889-85314908 | MS.gene012865:intron | 25.0% |
| !!! | TTCAGAACCAAATTTGTTTT+GGG | + | chr3.3:85315602-85315621 | MS.gene012865:CDS | 25.0% |
| !!! | TTCTTTTGTTTCTCTTTTTG+AGG | + | chr3.3:85314677-85314696 | MS.gene012865:CDS | 25.0% |
| !!! | TTTCAGAACCAAATTTGTTT+TGG | + | chr3.3:85315601-85315620 | MS.gene012865:CDS | 25.0% |
| AACTATAGTTGTTCCTCAAA+TGG | + | chr3.3:85313356-85313375 | MS.gene012865:CDS | 30.0% | |
| AAGTAGGAATTTATACCACA+GGG | - | chr3.3:85313944-85313963 | None:intergenic | 30.0% | |
| ACTATAGTTGTTCCTCAAAT+GGG | + | chr3.3:85313357-85313376 | MS.gene012865:CDS | 30.0% | |
| ATATTGTGGAGATTCTATCA+AGG | - | chr3.3:85314716-85314735 | None:intergenic | 30.0% | |
| ATTTGAGGAACAACTATAGT+TGG | - | chr3.3:85313357-85313376 | None:intergenic | 30.0% | |
| GAAACATGCACTTATAATCA+AGG | - | chr3.3:85313808-85313827 | None:intergenic | 30.0% | |
| GCATAATGCAGAAAATGAAT+AGG | - | chr3.3:85315066-85315085 | None:intergenic | 30.0% | |
| GCATTATACTGTGTATTCTT+TGG | + | chr3.3:85315423-85315442 | MS.gene012865:CDS | 30.0% | |
| GTTAGAAGCAATGAATTCTA+TGG | + | chr3.3:85315972-85315991 | MS.gene012865:CDS | 30.0% | |
| TAAGTAGGAATTTATACCAC+AGG | - | chr3.3:85313945-85313964 | None:intergenic | 30.0% | |
| TATAAGTGCATGTTTCCAAA+TGG | + | chr3.3:85313812-85313831 | MS.gene012865:CDS | 30.0% | |
| TATTGTGGAGATTCTATCAA+GGG | - | chr3.3:85314715-85314734 | None:intergenic | 30.0% | |
| TGGAAAACAAAACTGCAAAT+CGG | - | chr3.3:85314300-85314319 | None:intergenic | 30.0% | |
| TTAAGGACTTGAGGATATAT+AGG | + | chr3.3:85314039-85314058 | MS.gene012865:intron | 30.0% | |
| TTCATATACAGATCCTTATG+AGG | + | chr3.3:85313637-85313656 | MS.gene012865:CDS | 30.0% | |
| TTCTATAAGTTAAGGACTTG+AGG | + | chr3.3:85314030-85314049 | MS.gene012865:intron | 30.0% | |
| TTTATGCAATATTGAACACC+AGG | - | chr3.3:85313058-85313077 | None:intergenic | 30.0% | |
| ! | AAAAATGCTCCAAATTTTCC+TGG | - | chr3.3:85315375-85315394 | None:intergenic | 30.0% |
| ! | AATCTTTGTTTCAACTCAGT+TGG | + | chr3.3:85313463-85313482 | MS.gene012865:intron | 30.0% |
| ! | CAAATTTTCCTGGTTGAAAA+GGG | - | chr3.3:85315365-85315384 | None:intergenic | 30.0% |
| ! | TATGCAGCTTTTCATTCAAA+GGG | + | chr3.3:85313963-85313982 | MS.gene012865:intron | 30.0% |
| ! | TCAATGCATTTTCAGTTCAA+TGG | + | chr3.3:85315801-85315820 | MS.gene012865:intron | 30.0% |
| ! | TTATGCAGCTTTTCATTCAA+AGG | + | chr3.3:85313962-85313981 | MS.gene012865:intron | 30.0% |
| ! | TTTCCTTATCCTTTTCAATG+GGG | + | chr3.3:85314609-85314628 | MS.gene012865:CDS | 30.0% |
| !!! | TTGTTCTTGTTTTGCATCTT+TGG | - | chr3.3:85313002-85313021 | None:intergenic | 30.0% |
| AAAACCATAACAAGTAGTGC+TGG | - | chr3.3:85314141-85314160 | None:intergenic | 35.0% | |
| AAAAGTTTCCCCATAGTTGA+AGG | - | chr3.3:85314643-85314662 | None:intergenic | 35.0% | |
| AAATAACCATGCACTTGCAA+TGG | - | chr3.3:85314320-85314339 | None:intergenic | 35.0% | |
| AGATTCACTCAGACAATTAC+GGG | + | chr3.3:85313771-85313790 | MS.gene012865:CDS | 35.0% | |
| AGCAACACCAACAACAAAAA+TGG | - | chr3.3:85313690-85313709 | None:intergenic | 35.0% | |
| AGTCCAGTGAATGTTACATA+AGG | - | chr3.3:85313900-85313919 | None:intergenic | 35.0% | |
| ATCCAAAATGAAAGCAACCA+AGG | - | chr3.3:85315868-85315887 | None:intergenic | 35.0% | |
| ATTTCAATCCACTGTCATCA+CGG | - | chr3.3:85315920-85315939 | None:intergenic | 35.0% | |
| CAAATGGTTATGGGATTCTT+GGG | + | chr3.3:85313828-85313847 | MS.gene012865:CDS | 35.0% | |
| CATATTTGCATGTAGTCTAC+TGG | + | chr3.3:85314769-85314788 | MS.gene012865:intron | 35.0% | |
| GAATGAAAAGCTGCATAAGT+AGG | - | chr3.3:85313960-85313979 | None:intergenic | 35.0% | |
| GAATGAAAATACTAACGCCA+AGG | - | chr3.3:85313091-85313110 | None:intergenic | 35.0% | |
| GAGATTCACTCAGACAATTA+CGG | + | chr3.3:85313770-85313789 | MS.gene012865:intron | 35.0% | |
| GCACTCTCATTGTTATCTTA+GGG | + | chr3.3:85314941-85314960 | MS.gene012865:intron | 35.0% | |
| GCATGTTTCCAAATGGTTAT+GGG | + | chr3.3:85313819-85313838 | MS.gene012865:CDS | 35.0% | |
| GTCCAGTGAATGTTACATAA+GGG | - | chr3.3:85313899-85313918 | None:intergenic | 35.0% | |
| TATGAACCAACAACTACAGT+TGG | - | chr3.3:85313569-85313588 | None:intergenic | 35.0% | |
| TATGTAACATTCACTGGACT+TGG | + | chr3.3:85313900-85313919 | MS.gene012865:CDS | 35.0% | |
| TCATAAAACCAGCTGATATC+TGG | - | chr3.3:85315156-85315175 | None:intergenic | 35.0% | |
| TGAGAAGCCCAAAACAAATT+TGG | - | chr3.3:85315612-85315631 | None:intergenic | 35.0% | |
| TGCATGTTTCCAAATGGTTA+TGG | + | chr3.3:85313818-85313837 | MS.gene012865:CDS | 35.0% | |
| TTATGGGATTCTTGGGATTA+TGG | + | chr3.3:85313835-85313854 | MS.gene012865:CDS | 35.0% | |
| TTGAAGAAATGTGCTTAGTC+CGG | - | chr3.3:85313525-85313544 | None:intergenic | 35.0% | |
| ! | CAACTATTTTGTGTGCTTTC+TGG | - | chr3.3:85314382-85314401 | None:intergenic | 35.0% |
| ! | CCAAATTTTCCTGGTTGAAA+AGG | - | chr3.3:85315366-85315385 | None:intergenic | 35.0% |
| ! | CCTTTTCAACCAGGAAAATT+TGG | + | chr3.3:85315363-85315382 | MS.gene012865:intron | 35.0% |
| ! | TACTGGTACATTTTATGCTG+CGG | + | chr3.3:85314786-85314805 | MS.gene012865:CDS | 35.0% |
| ! | TGTTATGGTTTTCATCTCTC+AGG | + | chr3.3:85314149-85314168 | MS.gene012865:CDS | 35.0% |
| !! | TCATGCTCCATTTTTGTTGT+TGG | + | chr3.3:85313680-85313699 | MS.gene012865:intron | 35.0% |
| !!! | CTCTTTTTGAGGTAAGCAAT+AGG | + | chr3.3:85314688-85314707 | MS.gene012865:intron | 35.0% |
| AAAAACTCGTTGAGTCTGCA+TGG | - | chr3.3:85316002-85316021 | None:intergenic | 40.0% | |
| AAAATGAAGGTGGAGATGGT+GGG | + | chr3.3:85312912-85312931 | MS.gene012865:CDS | 40.0% | |
| AACAACTACAGTTGGCAATC+GGG | - | chr3.3:85313561-85313580 | None:intergenic | 40.0% | |
| AAGTACACATCGACCTCATA+AGG | - | chr3.3:85313653-85313672 | None:intergenic | 40.0% | |
| AAGTCCTACCTTCAACTATG+GGG | + | chr3.3:85314632-85314651 | MS.gene012865:CDS | 40.0% | |
| ACATAAGGGACAACACAAAG+TGG | - | chr3.3:85313885-85313904 | None:intergenic | 40.0% | |
| ACATTGTTTCCACCCATTTG+AGG | - | chr3.3:85313372-85313391 | None:intergenic | 40.0% | |
| ACTGCAAATCGGTCAAATGT+AGG | - | chr3.3:85314289-85314308 | None:intergenic | 40.0% | |
| ATAGTTGTTCCTCAAATGGG+TGG | + | chr3.3:85313360-85313379 | MS.gene012865:CDS | 40.0% | |
| CAACAACTACAGTTGGCAAT+CGG | - | chr3.3:85313562-85313581 | None:intergenic | 40.0% | |
| CAAGAGTCAGAATGTAATGC+TGG | - | chr3.3:85313317-85313336 | None:intergenic | 40.0% | |
| CAAGTAAAACAGGAACATGC+AGG | + | chr3.3:85315677-85315696 | MS.gene012865:CDS | 40.0% | |
| CAGAACTAATAAGACCAGCA+CGG | - | chr3.3:85314414-85314433 | None:intergenic | 40.0% | |
| CAGACAATTACGGGAATACA+AGG | + | chr3.3:85313780-85313799 | MS.gene012865:CDS | 40.0% | |
| CAGAGTACGTTGTTTGTTTC+CGG | + | chr3.3:85313503-85313522 | MS.gene012865:CDS | 40.0% | |
| CAGCATTACATTCTGACTCT+TGG | + | chr3.3:85313315-85313334 | MS.gene012865:CDS | 40.0% | |
| CAGGTAATTGCTCTTTAGCT+GGG | - | chr3.3:85313039-85313058 | None:intergenic | 40.0% | |
| CAGTATAATGCTGCCATGAT+TGG | - | chr3.3:85315414-85315433 | None:intergenic | 40.0% | |
| CATAAGGGACAACACAAAGT+GGG | - | chr3.3:85313884-85313903 | None:intergenic | 40.0% | |
| CATATTCGCTTCACACACAA+TGG | + | chr3.3:85315836-85315855 | MS.gene012865:CDS | 40.0% | |
| CCAAATGGTTATGGGATTCT+TGG | + | chr3.3:85313827-85313846 | MS.gene012865:CDS | 40.0% | |
| CCAAGAATCCCATAACCATT+TGG | - | chr3.3:85313830-85313849 | None:intergenic | 40.0% | |
| CTGATATCTGGATGACTCTT+CGG | - | chr3.3:85315144-85315163 | None:intergenic | 40.0% | |
| CTTCCCCATTGAAAAGGATA+AGG | - | chr3.3:85314615-85314634 | None:intergenic | 40.0% | |
| GAAGTCCTACCTTCAACTAT+GGG | + | chr3.3:85314631-85314650 | MS.gene012865:CDS | 40.0% | |
| GATTATGGAGAAATGCTGTC+AGG | + | chr3.3:85313850-85313869 | MS.gene012865:CDS | 40.0% | |
| GCTTGAACAGCTGACATAAT+TGG | - | chr3.3:85313605-85313624 | None:intergenic | 40.0% | |
| GGCACTCTCATTGTTATCTT+AGG | + | chr3.3:85314940-85314959 | MS.gene012865:intron | 40.0% | |
| GTCCCTTATGTAACATTCAC+TGG | + | chr3.3:85313894-85313913 | MS.gene012865:CDS | 40.0% | |
| TATGCACTGCGCTTATTTCA+GGG | + | chr3.3:85315081-85315100 | MS.gene012865:intron | 40.0% | |
| TCAGATAATCTCACCCATCT+AGG | - | chr3.3:85315704-85315723 | None:intergenic | 40.0% | |
| TCTTTGCTCAATGGCATGTT+TGG | + | chr3.3:85314971-85314990 | MS.gene012865:CDS | 40.0% | |
| TGAAAATACTAACGCCAAGG+TGG | - | chr3.3:85313088-85313107 | None:intergenic | 40.0% | |
| TGGCAACATGTGTTGAAGTT+GGG | + | chr3.3:85314112-85314131 | MS.gene012865:CDS | 40.0% | |
| TGGGAGAAGTTCAGTATCTA+TGG | + | chr3.3:85315942-85315961 | MS.gene012865:CDS | 40.0% | |
| TGTTTCAACTCAGTTGGAGA+AGG | + | chr3.3:85313469-85313488 | MS.gene012865:intron | 40.0% | |
| TTATGCACTGCGCTTATTTC+AGG | + | chr3.3:85315080-85315099 | MS.gene012865:intron | 40.0% | |
| TTCCATACCTTTGCCAATCA+TGG | + | chr3.3:85315398-85315417 | MS.gene012865:CDS | 40.0% | |
| TTTCAATCCACTGTCATCAC+GGG | - | chr3.3:85315919-85315938 | None:intergenic | 40.0% | |
| ! | TCACATTTCCCTTTTCAACC+AGG | + | chr3.3:85315354-85315373 | MS.gene012865:intron | 40.0% |
| ! | TGTTTTCCATTGCAAGTGCA+TGG | + | chr3.3:85314311-85314330 | MS.gene012865:CDS | 40.0% |
| ! | TTTTATGCTGCGGCTAGATA+TGG | + | chr3.3:85314796-85314815 | MS.gene012865:CDS | 40.0% |
| ! | TTTTCAATCACTGTTGCAGC+TGG | + | chr3.3:85314092-85314111 | MS.gene012865:intron | 40.0% |
| !! | ACTATTGGCATTGACAAGAG+TGG | + | chr3.3:85315114-85315133 | MS.gene012865:CDS | 40.0% |
| !! | ATGACAGTGGATTGAAATGG+TGG | + | chr3.3:85315922-85315941 | MS.gene012865:CDS | 40.0% |
| !! | CAGCTGAAGCACTTTTATTG+GGG | + | chr3.3:85313289-85313308 | MS.gene012865:intron | 40.0% |
| !! | CTATTGGCATTGACAAGAGT+GGG | + | chr3.3:85315115-85315134 | MS.gene012865:CDS | 40.0% |
| !! | GCAGCTGAAGCACTTTTATT+GGG | + | chr3.3:85313288-85313307 | MS.gene012865:intron | 40.0% |
| !! | GTCTTATTAGTTCTGCTCCA+TGG | + | chr3.3:85314419-85314438 | MS.gene012865:CDS | 40.0% |
| !! | GTGATGACAGTGGATTGAAA+TGG | + | chr3.3:85315919-85315938 | MS.gene012865:CDS | 40.0% |
| !! | TGACAGTGGATTGAAATGGT+GGG | + | chr3.3:85315923-85315942 | MS.gene012865:CDS | 40.0% |
| !! | TGCAGCTGAAGCACTTTTAT+TGG | + | chr3.3:85313287-85313306 | MS.gene012865:intron | 40.0% |
| !! | TGCCTTGGTTGCTTTCATTT+TGG | + | chr3.3:85315863-85315882 | MS.gene012865:CDS | 40.0% |
| AAATACTAACGCCAAGGTGG+AGG | - | chr3.3:85313085-85313104 | None:intergenic | 45.0% | |
| AATGCTGCCATGATTGGCAA+AGG | - | chr3.3:85315408-85315427 | None:intergenic | 45.0% | |
| AATGGAAATAATGCTGGCGG+TGG | + | chr3.3:85312935-85312954 | MS.gene012865:CDS | 45.0% | |
| AGAGTCATCCAGATATCAGC+TGG | + | chr3.3:85315145-85315164 | MS.gene012865:CDS | 45.0% | |
| ATTCGCTTCACACACAATGG+TGG | + | chr3.3:85315839-85315858 | MS.gene012865:CDS | 45.0% | |
| CAAAATGAAGGTGGAGATGG+TGG | + | chr3.3:85312911-85312930 | MS.gene012865:CDS | 45.0% | |
| CAACGTACTCTGAATCACCT+TGG | - | chr3.3:85313495-85313514 | None:intergenic | 45.0% | |
| CCAGCTAAAGAGCAATTACC+TGG | + | chr3.3:85313037-85313056 | MS.gene012865:CDS | 45.0% | |
| CCAGGTAATTGCTCTTTAGC+TGG | - | chr3.3:85313040-85313059 | None:intergenic | 45.0% | |
| CGATTGCCAACTGTAGTTGT+TGG | + | chr3.3:85313560-85313579 | MS.gene012865:CDS | 45.0% | |
| CTATCATCTTGGTTTCCCTG+TGG | + | chr3.3:85313926-85313945 | MS.gene012865:CDS | 45.0% | |
| CTGCTCCATGGTAAGATTGT+CGG | + | chr3.3:85314431-85314450 | MS.gene012865:intron | 45.0% | |
| CTGGCAACATGTGTTGAAGT+TGG | + | chr3.3:85314111-85314130 | MS.gene012865:CDS | 45.0% | |
| GCATAAATAGTCCTCCACCT+TGG | + | chr3.3:85313071-85313090 | MS.gene012865:CDS | 45.0% | |
| GCTCAAAATGAAGGTGGAGA+TGG | + | chr3.3:85312908-85312927 | MS.gene012865:CDS | 45.0% | |
| GCTTATTTCAGGGAAAACGC+TGG | + | chr3.3:85315091-85315110 | MS.gene012865:intron | 45.0% | |
| GGAAGTCCTACCTTCAACTA+TGG | + | chr3.3:85314630-85314649 | MS.gene012865:CDS | 45.0% | |
| GGAGTAGCTTCTTTGCTCAA+TGG | + | chr3.3:85314962-85314981 | MS.gene012865:CDS | 45.0% | |
| GGGAATGGAAATAATGCTGG+CGG | + | chr3.3:85312932-85312951 | MS.gene012865:CDS | 45.0% | |
| GGTGGGAATGGAAATAATGC+TGG | + | chr3.3:85312929-85312948 | MS.gene012865:CDS | 45.0% | |
| GTAGGACTTCCCCATTGAAA+AGG | - | chr3.3:85314621-85314640 | None:intergenic | 45.0% | |
| GTTTCCCCATAGTTGAAGGT+AGG | - | chr3.3:85314639-85314658 | None:intergenic | 45.0% | |
| TGCCATGATTGGCAAAGGTA+TGG | - | chr3.3:85315403-85315422 | None:intergenic | 45.0% | |
| TTGGGCTTCTCATTCTTCCT+CGG | + | chr3.3:85315620-85315639 | MS.gene012865:CDS | 45.0% | |
| ! | ATGTGCCGACAATCTTACCA+TGG | - | chr3.3:85314439-85314458 | None:intergenic | 45.0% |
| ! | GCTTCCAGCACTACTTGTTA+TGG | + | chr3.3:85314134-85314153 | MS.gene012865:CDS | 45.0% |
| ! | GGACTTGGTCTCTATCATCT+TGG | + | chr3.3:85313915-85313934 | MS.gene012865:CDS | 45.0% |
| !! | GGCATGTTTGGTTCTGTAAC+AGG | + | chr3.3:85314983-85315002 | MS.gene012865:CDS | 45.0% |
| AACTCAGTTGGAGAAGGCCA+AGG | + | chr3.3:85313475-85313494 | MS.gene012865:intron | 50.0% | |
| AGGAACATGCAGGTCCTAGA+TGG | + | chr3.3:85315687-85315706 | MS.gene012865:CDS | 50.0% | |
| CAGGGAAAACGCTGGACTAT+TGG | + | chr3.3:85315099-85315118 | MS.gene012865:intron | 50.0% | |
| CTGATAACAGAAGGTGGCAC+GGG | - | chr3.3:85314832-85314851 | None:intergenic | 50.0% | |
| GCTGATAACAGAAGGTGGCA+CGG | - | chr3.3:85314833-85314852 | None:intergenic | 50.0% | |
| GGAACATGCAGGTCCTAGAT+GGG | + | chr3.3:85315688-85315707 | MS.gene012865:CDS | 50.0% | |
| TATGCAGCTTCTGCAGGTCT+TGG | + | chr3.3:85315551-85315570 | MS.gene012865:intron | 50.0% | |
| TCTTTAGCTGGGTGTGCTAC+TGG | - | chr3.3:85313028-85313047 | None:intergenic | 50.0% | |
| TTGGGATATGCAGCTTCTGC+AGG | + | chr3.3:85315545-85315564 | MS.gene012865:intron | 50.0% | |
| ! | ATTGCGGTATTGAGACACCG+AGG | - | chr3.3:85315640-85315659 | None:intergenic | 50.0% |
| !! | GGACAACACAAAGTGGGCTA+AGG | - | chr3.3:85313878-85313897 | None:intergenic | 50.0% |
| ACACACAATGGTGGCTGCCT+TGG | + | chr3.3:85315848-85315867 | MS.gene012865:CDS | 55.0% | |
| CCACCTTCTGTTATCAGCCG+CGG | + | chr3.3:85314835-85314854 | MS.gene012865:CDS | 55.0% | |
| GGAAATAATGCTGGCGGTGG+CGG | + | chr3.3:85312938-85312957 | MS.gene012865:CDS | 55.0% | |
| GTTCCGCGGCTGATAACAGA+AGG | - | chr3.3:85314841-85314860 | None:intergenic | 55.0% | |
| TAAGACCAGCACGGTCAGTG+CGG | - | chr3.3:85314405-85314424 | None:intergenic | 55.0% | |
| TCTGTTATCAGCCGCGGAAC+TGG | + | chr3.3:85314841-85314860 | MS.gene012865:CDS | 55.0% | |
| ! | ACGGGCTGCATCATCTTCAC+GGG | - | chr3.3:85315901-85315920 | None:intergenic | 55.0% |
| ! | CACGGGCTGCATCATCTTCA+CGG | - | chr3.3:85315902-85315921 | None:intergenic | 55.0% |
| !! | GAAGGTGGAGATGGTGGGAA+TGG | + | chr3.3:85312917-85312936 | MS.gene012865:CDS | 55.0% |
| CCGCGGCTGATAACAGAAGG+TGG | - | chr3.3:85314838-85314857 | None:intergenic | 60.0% | |
| GATGCAGCCCGTGATGACAG+TGG | + | chr3.3:85315909-85315928 | MS.gene012865:CDS | 60.0% | |
| TTACCAGCCAGCCAGTTCCG+CGG | - | chr3.3:85314855-85314874 | None:intergenic | 60.0% | |
| TTATCAGCCGCGGAACTGGC+TGG | + | chr3.3:85314845-85314864 | MS.gene012865:CDS | 60.0% | |
| ! | AATGCTGGCGGTGGCGGTGA+TGG | + | chr3.3:85312944-85312963 | MS.gene012865:CDS | 65.0% |
| ! | AGTTGCCGCACTGACCGTGC+TGG | + | chr3.3:85314397-85314416 | MS.gene012865:CDS | 65.0% |
| CAGCCGCGGAACTGGCTGGC+TGG | + | chr3.3:85314849-85314868 | MS.gene012865:CDS | 75.0% | |
| ! | GCTGGCGGTGGCGGTGATGG+CGG | + | chr3.3:85312947-85312966 | MS.gene012865:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 85312905 | 85316034 | 85312905 | ID=MS.gene012865 |
| chr3.3 | mRNA | 85312905 | 85316034 | 85312905 | ID=MS.gene012865.t1;Parent=MS.gene012865 |
| chr3.3 | exon | 85312905 | 85313094 | 85312905 | ID=MS.gene012865.t1.exon1;Parent=MS.gene012865.t1 |
| chr3.3 | CDS | 85312905 | 85313094 | 85312905 | ID=cds.MS.gene012865.t1;Parent=MS.gene012865.t1 |
| chr3.3 | exon | 85313292 | 85313389 | 85313292 | ID=MS.gene012865.t1.exon2;Parent=MS.gene012865.t1 |
| chr3.3 | CDS | 85313292 | 85313389 | 85313292 | ID=cds.MS.gene012865.t1;Parent=MS.gene012865.t1 |
| chr3.3 | exon | 85313482 | 85313658 | 85313482 | ID=MS.gene012865.t1.exon3;Parent=MS.gene012865.t1 |
| chr3.3 | CDS | 85313482 | 85313658 | 85313482 | ID=cds.MS.gene012865.t1;Parent=MS.gene012865.t1 |
| chr3.3 | exon | 85313771 | 85313947 | 85313771 | ID=MS.gene012865.t1.exon4;Parent=MS.gene012865.t1 |
| chr3.3 | CDS | 85313771 | 85313947 | 85313771 | ID=cds.MS.gene012865.t1;Parent=MS.gene012865.t1 |
| chr3.3 | exon | 85314111 | 85314170 | 85314111 | ID=MS.gene012865.t1.exon5;Parent=MS.gene012865.t1 |
| chr3.3 | CDS | 85314111 | 85314170 | 85314111 | ID=cds.MS.gene012865.t1;Parent=MS.gene012865.t1 |
| chr3.3 | exon | 85314256 | 85314440 | 85314256 | ID=MS.gene012865.t1.exon6;Parent=MS.gene012865.t1 |
| chr3.3 | CDS | 85314256 | 85314440 | 85314256 | ID=cds.MS.gene012865.t1;Parent=MS.gene012865.t1 |
| chr3.3 | exon | 85314602 | 85314698 | 85314602 | ID=MS.gene012865.t1.exon7;Parent=MS.gene012865.t1 |
| chr3.3 | CDS | 85314602 | 85314698 | 85314602 | ID=cds.MS.gene012865.t1;Parent=MS.gene012865.t1 |
| chr3.3 | exon | 85314784 | 85314870 | 85314784 | ID=MS.gene012865.t1.exon8;Parent=MS.gene012865.t1 |
| chr3.3 | CDS | 85314784 | 85314870 | 85314784 | ID=cds.MS.gene012865.t1;Parent=MS.gene012865.t1 |
| chr3.3 | exon | 85314962 | 85315020 | 85314962 | ID=MS.gene012865.t1.exon9;Parent=MS.gene012865.t1 |
| chr3.3 | CDS | 85314962 | 85315020 | 85314962 | ID=cds.MS.gene012865.t1;Parent=MS.gene012865.t1 |
| chr3.3 | exon | 85315102 | 85315193 | 85315102 | ID=MS.gene012865.t1.exon10;Parent=MS.gene012865.t1 |
| chr3.3 | CDS | 85315102 | 85315193 | 85315102 | ID=cds.MS.gene012865.t1;Parent=MS.gene012865.t1 |
| chr3.3 | exon | 85315376 | 85315453 | 85315376 | ID=MS.gene012865.t1.exon11;Parent=MS.gene012865.t1 |
| chr3.3 | CDS | 85315376 | 85315453 | 85315376 | ID=cds.MS.gene012865.t1;Parent=MS.gene012865.t1 |
| chr3.3 | exon | 85315558 | 85315709 | 85315558 | ID=MS.gene012865.t1.exon12;Parent=MS.gene012865.t1 |
| chr3.3 | CDS | 85315558 | 85315709 | 85315558 | ID=cds.MS.gene012865.t1;Parent=MS.gene012865.t1 |
| chr3.3 | exon | 85315816 | 85316034 | 85315816 | ID=MS.gene012865.t1.exon13;Parent=MS.gene012865.t1 |
| chr3.3 | CDS | 85315816 | 85316034 | 85315816 | ID=cds.MS.gene012865.t1;Parent=MS.gene012865.t1 |
| Gene Sequence |
| Protein sequence |
