Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074377.t1 | XP_013461026.1 | 99.6 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 4.20E-304 | 1053.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074377.t1 | Q27GI3 | 86.1 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 8.2e-272 | 937.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074377.t1 | A0A072VA43 | 99.6 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 3.1e-304 | 1053.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene074377 | 0.815128 | 1.08E-51 | -1.69E-46 |
| MS.gene049697 | MS.gene074377 | 0.810663 | 1.03E-50 | -1.69E-46 |
| MS.gene050630 | MS.gene074377 | 0.801911 | 7.20E-49 | -1.69E-46 |
| MS.gene050667 | MS.gene074377 | 0.850859 | 1.29E-60 | -1.69E-46 |
| MS.gene051067 | MS.gene074377 | 0.811998 | 5.29E-51 | -1.69E-46 |
| MS.gene051087 | MS.gene074377 | 0.801579 | 8.42E-49 | -1.69E-46 |
| MS.gene052367 | MS.gene074377 | 0.800593 | 1.34E-48 | -1.69E-46 |
| MS.gene053500 | MS.gene074377 | 0.8216 | 3.70E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene074377 | MS.gene53408 | PPI |
| MS.gene074377 | MS.gene023585 | PPI |
| MS.gene074377 | MS.gene020517 | PPI |
| MS.gene074377 | MS.gene052675 | PPI |
| MS.gene074377 | MS.gene59470 | PPI |
| MS.gene074377 | MS.gene052677 | PPI |
| MS.gene074377 | MS.gene71606 | PPI |
| MS.gene074377 | MS.gene27811 | PPI |
| MS.gene074377 | MS.gene25185 | PPI |
| MS.gene074377 | MS.gene68064 | PPI |
| MS.gene015655 | MS.gene074377 | PPI |
| MS.gene074377 | MS.gene86930 | PPI |
| MS.gene074377 | MS.gene012865 | PPI |
| MS.gene074377 | MS.gene044204 | PPI |
| MS.gene074377 | MS.gene32869 | PPI |
| MS.gene074377 | MS.gene015069 | PPI |
| MS.gene074377 | MS.gene27812 | PPI |
| MS.gene074377 | MS.gene62686 | PPI |
| MS.gene074377 | MS.gene98973 | PPI |
| MS.gene074377 | MS.gene25800 | PPI |
| MS.gene074377 | MS.gene91317 | PPI |
| MS.gene074377 | MS.gene058853 | PPI |
| MS.gene074377 | MS.gene64768 | PPI |
| MS.gene074377 | MS.gene052674 | PPI |
| MS.gene074377 | MS.gene83067 | PPI |
| MS.gene074377 | MS.gene010624 | PPI |
| MS.gene37474 | MS.gene074377 | PPI |
| MS.gene074377 | MS.gene70718 | PPI |
| MS.gene074377 | MS.gene026529 | PPI |
| MS.gene074377 | MS.gene96701 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074377.t1 | MTR_3g078270 | 99.624 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1068 |
| MS.gene074377.t1 | MTR_4g106750 | 90.038 | 532 | 53 | 0 | 1 | 532 | 1 | 532 | 0.0 | 985 |
| MS.gene074377.t1 | MTR_4g106750 | 90.476 | 483 | 46 | 0 | 50 | 532 | 1 | 483 | 0.0 | 892 |
| MS.gene074377.t1 | MTR_8g063220 | 81.051 | 533 | 100 | 1 | 1 | 532 | 1 | 533 | 0.0 | 891 |
| MS.gene074377.t1 | MTR_5g035180 | 76.236 | 526 | 124 | 1 | 8 | 532 | 13 | 538 | 0.0 | 837 |
| MS.gene074377.t1 | MTR_4g106750 | 89.730 | 370 | 38 | 0 | 163 | 532 | 11 | 380 | 0.0 | 685 |
| MS.gene074377.t1 | MTR_3g103230 | 60.190 | 525 | 205 | 2 | 9 | 532 | 33 | 554 | 0.0 | 676 |
| MS.gene074377.t1 | MTR_1g106085 | 59.280 | 528 | 212 | 2 | 4 | 531 | 2 | 526 | 0.0 | 641 |
| MS.gene074377.t1 | MTR_5g022110 | 58.846 | 520 | 211 | 1 | 13 | 532 | 31 | 547 | 0.0 | 636 |
| MS.gene074377.t1 | MTR_8g086520 | 59.653 | 518 | 207 | 1 | 13 | 530 | 7 | 522 | 0.0 | 633 |
| MS.gene074377.t1 | MTR_2g016460 | 58.238 | 522 | 216 | 1 | 9 | 530 | 3 | 522 | 0.0 | 625 |
| MS.gene074377.t1 | MTR_3g080390 | 59.417 | 515 | 206 | 2 | 17 | 530 | 6 | 518 | 0.0 | 612 |
| MS.gene074377.t1 | MTR_8g086520 | 59.513 | 452 | 183 | 0 | 9 | 460 | 3 | 454 | 0.0 | 544 |
| MS.gene074377.t1 | MTR_1g021120 | 52.632 | 513 | 241 | 1 | 19 | 531 | 36 | 546 | 0.0 | 536 |
| MS.gene074377.t1 | MTR_8g086520 | 60.644 | 404 | 157 | 1 | 127 | 530 | 5 | 406 | 3.30e-177 | 505 |
| MS.gene074377.t1 | MTR_8g086520 | 60.150 | 399 | 159 | 0 | 9 | 407 | 3 | 401 | 9.80e-169 | 483 |
| MS.gene074377.t1 | MTR_8g068550 | 34.775 | 555 | 317 | 7 | 10 | 529 | 211 | 755 | 8.95e-108 | 339 |
| MS.gene074377.t1 | MTR_5g032020 | 36.486 | 518 | 291 | 4 | 40 | 525 | 182 | 693 | 8.91e-104 | 327 |
| MS.gene074377.t1 | MTR_2g084895 | 34.990 | 523 | 296 | 6 | 43 | 529 | 164 | 678 | 3.69e-94 | 301 |
| MS.gene074377.t1 | MTR_4g055290 | 34.667 | 525 | 290 | 8 | 43 | 529 | 171 | 680 | 7.11e-90 | 290 |
| MS.gene074377.t1 | MTR_2g103510 | 32.115 | 520 | 315 | 6 | 26 | 529 | 94 | 591 | 4.23e-86 | 278 |
| MS.gene074377.t1 | MTR_8g086535 | 65.000 | 100 | 35 | 0 | 308 | 407 | 18 | 117 | 6.02e-36 | 130 |
| MS.gene074377.t1 | MTR_1g079900 | 40.945 | 127 | 52 | 5 | 420 | 530 | 59 | 178 | 2.45e-20 | 89.7 |
| MS.gene074377.t1 | MTR_3g087320 | 55.224 | 67 | 16 | 1 | 461 | 527 | 72 | 124 | 2.66e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074377.t1 | AT5G62890 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| MS.gene074377.t1 | AT5G62890 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| MS.gene074377.t1 | AT5G62890 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| MS.gene074377.t1 | AT5G49990 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| MS.gene074377.t1 | AT5G49990 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| MS.gene074377.t1 | AT5G49990 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| MS.gene074377.t1 | AT5G49990 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| MS.gene074377.t1 | AT1G60030 | 76.952 | 525 | 121 | 0 | 8 | 532 | 14 | 538 | 0.0 | 851 |
| MS.gene074377.t1 | AT5G62890 | 85.652 | 460 | 66 | 0 | 1 | 460 | 1 | 460 | 0.0 | 810 |
| MS.gene074377.t1 | AT1G10540 | 68.587 | 538 | 162 | 3 | 1 | 531 | 1 | 538 | 0.0 | 777 |
| MS.gene074377.t1 | AT1G49960 | 61.111 | 522 | 203 | 0 | 10 | 531 | 4 | 525 | 0.0 | 649 |
| MS.gene074377.t1 | AT2G34190 | 58.880 | 518 | 211 | 1 | 13 | 530 | 7 | 522 | 0.0 | 633 |
| MS.gene074377.t1 | AT1G65550 | 55.198 | 529 | 228 | 2 | 10 | 531 | 14 | 540 | 0.0 | 616 |
| MS.gene074377.t1 | AT2G05760 | 57.282 | 515 | 217 | 2 | 17 | 530 | 6 | 518 | 0.0 | 605 |
| MS.gene074377.t1 | AT1G10540 | 68.041 | 388 | 117 | 3 | 1 | 381 | 1 | 388 | 0.0 | 543 |
| MS.gene074377.t1 | AT2G26510 | 51.257 | 517 | 245 | 3 | 18 | 531 | 36 | 548 | 1.68e-180 | 519 |
| MS.gene074377.t1 | AT5G25420 | 49.436 | 443 | 154 | 5 | 10 | 452 | 26 | 398 | 1.33e-143 | 420 |
| MS.gene074377.t1 | AT2G26510 | 52.861 | 367 | 167 | 2 | 18 | 381 | 36 | 399 | 1.92e-126 | 376 |
| MS.gene074377.t1 | AT2G26510 | 52.260 | 354 | 163 | 2 | 18 | 368 | 36 | 386 | 6.07e-120 | 360 |
| MS.gene074377.t1 | AT2G27810 | 35.509 | 521 | 297 | 5 | 43 | 529 | 186 | 701 | 6.90e-93 | 298 |
| MS.gene074377.t1 | AT4G38050 | 35.249 | 522 | 300 | 5 | 40 | 529 | 189 | 704 | 2.27e-92 | 297 |
| MS.gene074377.t1 | AT2G27810 | 34.312 | 545 | 295 | 7 | 43 | 529 | 186 | 725 | 3.33e-88 | 287 |
| MS.gene074377.t1 | AT2G27810 | 39.012 | 405 | 228 | 3 | 43 | 429 | 186 | 589 | 1.01e-78 | 258 |
| MS.gene074377.t1 | AT2G27810 | 39.106 | 358 | 199 | 3 | 43 | 382 | 186 | 542 | 5.02e-68 | 229 |
Find 140 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCACTGTGTAGGAAAATT+TGG | 0.153225 | 3.4:+74968836 | MS.gene074377:intron |
| TTGGTTTCTCTTGTTGGTTT+TGG | 0.211154 | 3.4:+74966422 | MS.gene074377:CDS |
| GGGGTTGGCATTCTTCTATC+TGG | 0.251901 | 3.4:+74968493 | MS.gene074377:CDS |
| CAGAGAAAATGCTGGTCTTT+TGG | 0.254875 | 3.4:+74968648 | MS.gene074377:intron |
| GTTCCATTGGTTTCTCTTGT+TGG | 0.266604 | 3.4:+74966416 | MS.gene074377:CDS |
| ATTAGGCTTCTCTATATTCT+TGG | 0.267261 | 3.4:+74969094 | MS.gene074377:CDS |
| ACATTGGTGCAAACACTCTT+TGG | 0.307293 | 3.4:+74965325 | MS.gene074377:CDS |
| ATTCTTCTATCTGGATTGTT+TGG | 0.309588 | 3.4:+74968502 | MS.gene074377:CDS |
| TCACGATTACCTGCAGTAAT+TGG | 0.310968 | 3.4:+74965349 | MS.gene074377:CDS |
| GCAGCTGAGGCCATACTTCT+TGG | 0.316014 | 3.4:+74965080 | MS.gene074377:intron |
| TTTAGAACAAAGTTCATATT+AGG | 0.323198 | 3.4:+74969077 | MS.gene074377:CDS |
| GAGCTTTCATTGCTGTATAT+AGG | 0.350680 | 3.4:+74968255 | MS.gene074377:CDS |
| TGCCTATTCTTTGCTTATGT+TGG | 0.351940 | 3.4:+74968905 | MS.gene074377:CDS |
| TTAGGCTTCTCTATATTCTT+GGG | 0.353632 | 3.4:+74969095 | MS.gene074377:CDS |
| GCCACCTTCTATTCTTAGTC+GGG | 0.361786 | 3.4:+74968298 | MS.gene074377:CDS |
| TACTAGGCTTTAGTGGCCTT+TGG | 0.362108 | 3.4:+74966125 | MS.gene074377:CDS |
| TATACAGCAATCAATGGTTA+TGG | 0.366024 | 3.4:+74969146 | MS.gene074377:CDS |
| CAAATAGTACTAGGCTTTAG+TGG | 0.377969 | 3.4:+74966118 | MS.gene074377:CDS |
| CAATCAAAAGCATTTGTTGC+GGG | 0.379620 | 3.4:+74969430 | MS.gene074377:CDS |
| GCTCCCCATTGAAAGGGATA+TGG | 0.382055 | 3.4:-74967516 | None:intergenic |
| CACTGCTCTTGTTCCTCAGA+TGG | 0.382385 | 3.4:+74965148 | MS.gene074377:CDS |
| AAGCAGAGTTTCAATTACTT+TGG | 0.386238 | 3.4:-74965284 | None:intergenic |
| TAGACAACACTTTACATAAG+AGG | 0.388088 | 3.4:+74969470 | MS.gene074377:CDS |
| GTAATGCAGTAAGAAATATT+TGG | 0.393915 | 3.4:-74964097 | None:intergenic |
| GAAGATAATGAGGGCAGTCC+AGG | 0.395646 | 3.4:+74966069 | MS.gene074377:CDS |
| ATATTTGGTAGTTGATCCTT+TGG | 0.395677 | 3.4:-74964082 | None:intergenic |
| TCTATTCTTAGTCGGGGTAT+TGG | 0.399112 | 3.4:+74968305 | MS.gene074377:CDS |
| TTTCGGTGGAGAACCGTTAT+AGG | 0.402300 | 3.4:-74966870 | None:intergenic |
| ACTTTGTTCTAAAACTGTTA+AGG | 0.406816 | 3.4:-74969067 | None:intergenic |
| ACTGCCAGAGCTTATATTGC+TGG | 0.410871 | 3.4:+74966579 | MS.gene074377:CDS |
| ATGTTGAAATCCAAGAAGTA+TGG | 0.411526 | 3.4:-74965090 | None:intergenic |
| TCCTTTGGTGGATGTGGTTG+TGG | 0.413545 | 3.4:-74964067 | None:intergenic |
| TACAATGCAGCAATGATTGC+AGG | 0.417508 | 3.4:-74968881 | None:intergenic |
| GACTTATAGATGCTGCTCCT+TGG | 0.435416 | 3.4:+74966924 | MS.gene074377:CDS |
| TGCCACCTTCTATTCTTAGT+CGG | 0.437110 | 3.4:+74968297 | MS.gene074377:CDS |
| GTGCCACATGTGTTGCATTC+GGG | 0.438570 | 3.4:+74966764 | MS.gene074377:CDS |
| GAGTTCCATATCCCTTTCAA+TGG | 0.440675 | 3.4:+74967511 | MS.gene074377:CDS |
| TCCACTTTCAGCTGTTCCAT+TGG | 0.444367 | 3.4:+74966403 | MS.gene074377:CDS |
| AAATATTTGTTTAGATTGAA+AGG | 0.450377 | 3.4:-74969586 | None:intergenic |
| TAGTCGGGGTATTGGTTGGC+AGG | 0.453343 | 3.4:+74968313 | MS.gene074377:CDS |
| GCTGTTCTACTCACTGTTGG+AGG | 0.454047 | 3.4:+74966845 | MS.gene074377:CDS |
| GTTGCTAAATGTGTAGAGAT+TGG | 0.455062 | 3.4:+74966556 | MS.gene074377:CDS |
| TCTTCTGATAAGACCTCAAT+CGG | 0.455463 | 3.4:-74965442 | None:intergenic |
| CATCTTCCACCTGTGTGGAC+TGG | 0.457011 | 3.4:-74969170 | None:intergenic |
| TCAACTCTTCAAATAGTACT+AGG | 0.457439 | 3.4:+74966109 | MS.gene074377:CDS |
| AGTTGATCCTTTGGTGGATG+TGG | 0.457879 | 3.4:-74964073 | None:intergenic |
| TTGCTGCTTGTAGGCGGAGA+AGG | 0.458011 | 3.4:+74965261 | MS.gene074377:intron |
| ATTGCTGGTATTTGTTTCAC+AGG | 0.458880 | 3.4:+74966594 | MS.gene074377:CDS |
| CTGTTCTACTCACTGTTGGA+GGG | 0.460539 | 3.4:+74966846 | MS.gene074377:CDS |
| TAAGAATAGAAGGTGGCAAT+GGG | 0.462513 | 3.4:-74968292 | None:intergenic |
| GATAAGACCTCAATCGGATC+TGG | 0.463050 | 3.4:-74965436 | None:intergenic |
| TACGTGACAGTTCAATGATA+TGG | 0.473040 | 3.4:+74969393 | MS.gene074377:intron |
| AGAATAATTGAGATTGTCGT+TGG | 0.473319 | 3.4:-74965391 | None:intergenic |
| TGAGATTGTCGTTGGAACAT+AGG | 0.474228 | 3.4:-74965383 | None:intergenic |
| GAAGCTATGGCAGGAGGAGG+AGG | 0.475226 | 3.4:+74964022 | None:intergenic |
| AGAGTTGTGCAGATATCTGC+TGG | 0.488720 | 3.4:+74968694 | MS.gene074377:CDS |
| ATACCCCGACTAAGAATAGA+AGG | 0.488782 | 3.4:-74968302 | None:intergenic |
| TACCAACATAAGCAAAGAAT+AGG | 0.490475 | 3.4:-74968907 | None:intergenic |
| TTCTTAGTCGGGGTATTGGT+TGG | 0.491475 | 3.4:+74968309 | MS.gene074377:CDS |
| CAGTCCACACAGGTGGAAGA+TGG | 0.492027 | 3.4:+74969171 | MS.gene074377:CDS |
| AGTTCCATATCCCTTTCAAT+GGG | 0.492360 | 3.4:+74967512 | MS.gene074377:CDS |
| GATCTGGTTCATTACTGAAT+CGG | 0.493059 | 3.4:-74965420 | None:intergenic |
| GGATTGTTTGGAACAATTAG+CGG | 0.502285 | 3.4:+74968514 | MS.gene074377:CDS |
| AATGATTGCAGGTGGGATAG+AGG | 0.502422 | 3.4:-74968870 | None:intergenic |
| TGTGCCACATGTGTTGCATT+CGG | 0.505553 | 3.4:+74966763 | MS.gene074377:CDS |
| AGAAATTCAAGAAGATAATG+AGG | 0.505728 | 3.4:+74966059 | MS.gene074377:intron |
| TATGCTGTTCTACTCACTGT+TGG | 0.507624 | 3.4:+74966842 | MS.gene074377:CDS |
| GGACAAGTACAAGTCATTCA+AGG | 0.513945 | 3.4:+74969531 | MS.gene074377:CDS |
| TCCTGCCGCACTGATCGTGC+TGG | 0.513982 | 3.4:+74966902 | MS.gene074377:CDS |
| ACTGCTCTTGTTCCTCAGAT+GGG | 0.514976 | 3.4:+74965149 | MS.gene074377:CDS |
| ATACAGCAATCAATGGTTAT+GGG | 0.516393 | 3.4:+74969147 | MS.gene074377:CDS |
| GAGGGATTCATCTATTAGAA+AGG | 0.518790 | 3.4:+74969489 | MS.gene074377:CDS |
| TCCAGCACGATCAGTGCGGC+AGG | 0.522111 | 3.4:-74966903 | None:intergenic |
| CTTGTTCCTCAGATGGGAGG+TGG | 0.523430 | 3.4:+74965155 | MS.gene074377:CDS |
| ATCTTTCGTTGCTCTTGTAG+AGG | 0.524901 | 3.4:+74967581 | MS.gene074377:CDS |
| TATTCACAATTGCAATTGTG+TGG | 0.525941 | 3.4:+74966816 | MS.gene074377:CDS |
| TCTTATGTAAAGTGTTGTCT+AGG | 0.530549 | 3.4:-74969468 | None:intergenic |
| TTTCCCTGCAGAGAAAATGC+TGG | 0.530895 | 3.4:+74968640 | MS.gene074377:intron |
| ACCAATGGAACAGCTGAAAG+TGG | 0.532981 | 3.4:-74966404 | None:intergenic |
| AGACAACACTTTACATAAGA+GGG | 0.533794 | 3.4:+74969471 | MS.gene074377:CDS |
| ACTGTTGGAGGGGCCTATAA+CGG | 0.535674 | 3.4:+74966857 | MS.gene074377:CDS |
| TTAGATTAAGAAGCTATGGC+AGG | 0.535979 | 3.4:+74964013 | None:intergenic |
| ATCTGAGGAACAAGAGCAGT+GGG | 0.536762 | 3.4:-74965146 | None:intergenic |
| AATACCAGCAATATAAGCTC+TGG | 0.537388 | 3.4:-74966583 | None:intergenic |
| AATGAGTATACAGCAATCAA+TGG | 0.538381 | 3.4:+74969140 | MS.gene074377:CDS |
| CGAAGCGTTTGCCATGATGA+TGG | 0.538919 | 3.4:+74967557 | MS.gene074377:CDS |
| TGTAGGTGCTCCCCATTGAA+AGG | 0.539040 | 3.4:-74967523 | None:intergenic |
| AGCATTTGTTGCGGGTGTTG+TGG | 0.545109 | 3.4:+74969438 | MS.gene074377:CDS |
| CGATTACCTGCAGTAATTGG+AGG | 0.545684 | 3.4:+74965352 | MS.gene074377:CDS |
| TTTGGTAGTTGATCCTTTGG+TGG | 0.549747 | 3.4:-74964079 | None:intergenic |
| CCAATCAAAAGCATTTGTTG+CGG | 0.549945 | 3.4:+74969429 | MS.gene074377:CDS |
| TAAGACCCTCCAATTACTGC+AGG | 0.557300 | 3.4:-74965358 | None:intergenic |
| AGAAACTAACGCCATGGAGG+AGG | 0.558083 | 3.4:-74964124 | None:intergenic |
| GCTTCGCCTGCATCAAATGT+AGG | 0.559087 | 3.4:-74967540 | None:intergenic |
| GCCTTTGGCGTAATGTTGCA+AGG | 0.561053 | 3.4:+74966140 | MS.gene074377:CDS |
| AGTCCACACAGGTGGAAGAT+GGG | 0.561280 | 3.4:+74969172 | MS.gene074377:CDS |
| TGTTCTACTCACTGTTGGAG+GGG | 0.564508 | 3.4:+74966847 | MS.gene074377:CDS |
| CTAAGAATAGAAGGTGGCAA+TGG | 0.564521 | 3.4:-74968293 | None:intergenic |
| GTAGGTGCTCCCCATTGAAA+GGG | 0.565086 | 3.4:-74967522 | None:intergenic |
| TCATCATTTGCAGGAGCTGG+AGG | 0.565976 | 3.4:+74969020 | MS.gene074377:intron |
| AACGAAAGATGCCATCATCA+TGG | 0.570031 | 3.4:-74967568 | None:intergenic |
| ACAATCTCAATTATTCTCGC+TGG | 0.570834 | 3.4:+74965397 | MS.gene074377:CDS |
| GGACAGAGGCAAACATTGGT+GGG | 0.574941 | 3.4:+74969510 | MS.gene074377:CDS |
| TAAGAAGCTATGGCAGGAGG+AGG | 0.579489 | 3.4:+74964019 | None:intergenic |
| TGTTGCTGGTATTAACACAT+TGG | 0.581871 | 3.4:+74965309 | MS.gene074377:CDS |
| GATTAAGAAGCTATGGCAGG+AGG | 0.583299 | 3.4:+74964016 | None:intergenic |
| AGGACAGAGGCAAACATTGG+TGG | 0.588315 | 3.4:+74969509 | MS.gene074377:CDS |
| GGAGCACCTACATTTGATGC+AGG | 0.588577 | 3.4:+74967534 | MS.gene074377:CDS |
| CGCACAATTAATTAAACCGA+TGG | 0.592039 | 3.4:-74969610 | None:intergenic |
| GCATTACTAGTCCTCCTCCA+TGG | 0.599317 | 3.4:+74964113 | MS.gene074377:CDS |
| GAAAGGACAGAGGCAAACAT+TGG | 0.599729 | 3.4:+74969506 | MS.gene074377:CDS |
| AAACCAACAAGAGAAACCAA+TGG | 0.606011 | 3.4:-74966419 | None:intergenic |
| TAATGAACCAGATCCGATTG+AGG | 0.607552 | 3.4:+74965429 | MS.gene074377:CDS |
| ACATTTCCACCTCCCATCTG+AGG | 0.609636 | 3.4:-74965161 | None:intergenic |
| AAGATAATGAGGGCAGTCCA+GGG | 0.610018 | 3.4:+74966070 | MS.gene074377:CDS |
| GCTCTTGTTCCTCAGATGGG+AGG | 0.615420 | 3.4:+74965152 | MS.gene074377:CDS |
| GAAATTCAAGAAGATAATGA+GGG | 0.618663 | 3.4:+74966060 | MS.gene074377:intron |
| AATGCAGCAATGATTGCAGG+TGG | 0.623862 | 3.4:-74968878 | None:intergenic |
| CCACCTTCTATTCTTAGTCG+GGG | 0.624455 | 3.4:+74968299 | MS.gene074377:CDS |
| ACCTTGCAACATTACGCCAA+AGG | 0.624889 | 3.4:-74966141 | None:intergenic |
| GATTACCTGCAGTAATTGGA+GGG | 0.629859 | 3.4:+74965353 | MS.gene074377:CDS |
| TTTCCCGAATGCAACACATG+TGG | 0.633762 | 3.4:-74966767 | None:intergenic |
| ATACCCATCTTCCACCTGTG+TGG | 0.636689 | 3.4:-74969175 | None:intergenic |
| TATGGGCCAGTCCACACAGG+TGG | 0.641196 | 3.4:+74969164 | MS.gene074377:CDS |
| CATCTGAGGAACAAGAGCAG+TGG | 0.642369 | 3.4:-74965147 | None:intergenic |
| GACAAGTACAAGTCATTCAA+GGG | 0.644339 | 3.4:+74969532 | MS.gene074377:CDS |
| ACCACAACCACATCCACCAA+AGG | 0.644503 | 3.4:+74964066 | MS.gene074377:CDS |
| TACAGCAATGAAAGCTCCAG+TGG | 0.645288 | 3.4:-74968249 | None:intergenic |
| GGTTATGGGCCAGTCCACAC+AGG | 0.660679 | 3.4:+74969161 | MS.gene074377:CDS |
| CAAGGGTGACACAAGAAGTG+AGG | 0.668674 | 3.4:+74969549 | MS.gene074377:CDS |
| GTTTCAGTCTTACACAGACA+CGG | 0.669427 | 3.4:-74968542 | None:intergenic |
| ATGCAGCAATGATTGCAGGT+GGG | 0.675249 | 3.4:-74968877 | None:intergenic |
| AAAAGAAACTAACGCCATGG+AGG | 0.701039 | 3.4:-74964127 | None:intergenic |
| AAGCAACAATAAGAGCACCC+TGG | 0.705283 | 3.4:-74966087 | None:intergenic |
| AAGAATAGAAGGTGGCAATG+GGG | 0.708313 | 3.4:-74968291 | None:intergenic |
| GTATACTCATTGAAGTACTG+TGG | 0.710895 | 3.4:-74969128 | None:intergenic |
| TCATCTATTAGAAAGGACAG+AGG | 0.717827 | 3.4:+74969496 | MS.gene074377:CDS |
| GTTCCATATCCCTTTCAATG+GGG | 0.722732 | 3.4:+74967513 | MS.gene074377:CDS |
| CCCCGACTAAGAATAGAAGG+TGG | 0.728889 | 3.4:-74968299 | None:intergenic |
| TAAGTCCAGCACGATCAGTG+CGG | 0.740720 | 3.4:-74966907 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAGCAAAAAAAAAAA+AGG | - | chr3.4:74966028-74966047 | None:intergenic | 10.0% |
| !! | GTTGATTAAAATAAAATAAA+GGG | + | chr3.4:74964210-74964229 | MS.gene074377:intron | 10.0% |
| !! | AAATATTTGTTTAGATTGAA+AGG | - | chr3.4:74969589-74969608 | None:intergenic | 15.0% |
| !! | ATAAATGATAATCGTAATAA+TGG | + | chr3.4:74968362-74968381 | MS.gene074377:intron | 15.0% |
| !! | ATATATATAATAGTACTGTA+AGG | + | chr3.4:74968006-74968025 | MS.gene074377:intron | 15.0% |
| !! | CAATTTCATTTATATAAACA+AGG | - | chr3.4:74968610-74968629 | None:intergenic | 15.0% |
| !! | CTTGTTTATATAAATGAAAT+TGG | + | chr3.4:74968608-74968627 | MS.gene074377:intron | 15.0% |
| !! | GGTTGATTAAAATAAAATAA+AGG | + | chr3.4:74964209-74964228 | MS.gene074377:intron | 15.0% |
| !! | TTTAACTATATAACTTGAAA+AGG | - | chr3.4:74968098-74968117 | None:intergenic | 15.0% |
| !!! | AATGAATAAATTTAAAGCTT+TGG | + | chr3.4:74967110-74967129 | MS.gene074377:intron | 15.0% |
| !!! | AATTAATTTGATGAGAAATT+TGG | + | chr3.4:74965045-74965064 | MS.gene074377:intron | 15.0% |
| !!! | ATTAATTTGATGAGAAATTT+GGG | + | chr3.4:74965046-74965065 | MS.gene074377:intron | 15.0% |
| !!! | GATTGATTATTTTTATAAGA+GGG | - | chr3.4:74967834-74967853 | None:intergenic | 15.0% |
| !!! | TCTTTGTTCTTTTAATATTA+TGG | + | chr3.4:74966694-74966713 | MS.gene074377:intron | 15.0% |
| !!! | TGATATTCTCTTTTTTAAAT+TGG | + | chr3.4:74967618-74967637 | MS.gene074377:intron | 15.0% |
| !!! | TGATTGATTATTTTTATAAG+AGG | - | chr3.4:74967835-74967854 | None:intergenic | 15.0% |
| !!! | TTAATTAAGCATTGATATTA+AGG | + | chr3.4:74964376-74964395 | MS.gene074377:intron | 15.0% |
| !!! | TTTACTGAATACAATTTTTT+TGG | - | chr3.4:74966304-74966323 | None:intergenic | 15.0% |
| !! | AAATTCCTTATTCAAATCTT+TGG | + | chr3.4:74966322-74966341 | MS.gene074377:intron | 20.0% |
| !! | GATTTGAAAAAAGAGAAAAT+TGG | - | chr3.4:74967182-74967201 | None:intergenic | 20.0% |
| !! | GTATAAGAACATTATTTGTT+TGG | + | chr3.4:74964232-74964251 | MS.gene074377:intron | 20.0% |
| !! | TATTTCTTACTTTATGTCAT+TGG | + | chr3.4:74964284-74964303 | MS.gene074377:intron | 20.0% |
| !! | TTGTGAATAAAACAGAAAAA+CGG | - | chr3.4:74966805-74966824 | None:intergenic | 20.0% |
| !!! | AAAAAACTTTTGGTAATTGT+TGG | + | chr3.4:74967921-74967940 | MS.gene074377:intron | 20.0% |
| !!! | AAAAACTTTTGGTAATTGTT+GGG | + | chr3.4:74967922-74967941 | MS.gene074377:intron | 20.0% |
| !!! | AAATATATTTTTTGCAGAGT+CGG | + | chr3.4:74969210-74969229 | MS.gene074377:intron | 20.0% |
| !!! | AAATTGTAGTTTTCAAAGTT+AGG | + | chr3.4:74965874-74965893 | MS.gene074377:intron | 20.0% |
| !!! | AAATTGTAGTTTTCATACTT+AGG | - | chr3.4:74965680-74965699 | None:intergenic | 20.0% |
| !!! | AACTTTGAAAACTACAATTT+TGG | - | chr3.4:74965874-74965893 | None:intergenic | 20.0% |
| !!! | AAGTATGAAAACTACAATTT+TGG | + | chr3.4:74965680-74965699 | MS.gene074377:intron | 20.0% |
| !!! | AATTGTAGTTTTCAAAGTTA+GGG | + | chr3.4:74965875-74965894 | MS.gene074377:intron | 20.0% |
| !!! | AATTGTAGTTTTCATACTTA+GGG | - | chr3.4:74965679-74965698 | None:intergenic | 20.0% |
| !!! | AATTTTTTTGGTGAATATCA+TGG | - | chr3.4:74966292-74966311 | None:intergenic | 20.0% |
| !!! | AATTTTTTTTTGCCCTTATT+GGG | + | chr3.4:74967255-74967274 | MS.gene074377:intron | 20.0% |
| !!! | AGTTTTAAAAATTACTGGTA+AGG | + | chr3.4:74967880-74967899 | MS.gene074377:intron | 20.0% |
| !!! | ATGATTTTCTTTTCAATTCT+CGG | + | chr3.4:74968721-74968740 | MS.gene074377:CDS | 20.0% |
| !!! | ATGTTTGATTTCATTTTTAG+AGG | - | chr3.4:74964735-74964754 | None:intergenic | 20.0% |
| !!! | ATTCAGGTTGTTTTATTTTT+GGG | + | chr3.4:74964815-74964834 | MS.gene074377:intron | 20.0% |
| !!! | GAAAGTTTTACTTGATTTAT+AGG | - | chr3.4:74968429-74968448 | None:intergenic | 20.0% |
| !!! | GAATGAGTTTTAAAAATTAC+TGG | + | chr3.4:74967875-74967894 | MS.gene074377:intron | 20.0% |
| !!! | TATTCAGGTTGTTTTATTTT+TGG | + | chr3.4:74964814-74964833 | MS.gene074377:intron | 20.0% |
| !!! | TCTAAACAAATATTTTCCAT+CGG | + | chr3.4:74969594-74969613 | MS.gene074377:CDS | 20.0% |
| !!! | TGCAAATAGAATCTAAAATT+AGG | - | chr3.4:74964311-74964330 | None:intergenic | 20.0% |
| !!! | TGTTTGATTTCATTTTTAGA+GGG | - | chr3.4:74964734-74964753 | None:intergenic | 20.0% |
| !!! | TTAATTTGATGAGAAATTTG+GGG | + | chr3.4:74965047-74965066 | MS.gene074377:intron | 20.0% |
| !!! | TTTAATCCTGAAAAAACTTT+TGG | + | chr3.4:74967911-74967930 | MS.gene074377:intron | 20.0% |
| !!! | TTTAGAACAAAGTTCATATT+AGG | + | chr3.4:74969077-74969096 | MS.gene074377:CDS | 20.0% |
| ! | AAATCAAACTTACATCAGAT+TGG | - | chr3.4:74966362-74966381 | None:intergenic | 25.0% |
| ! | AAATGTTGGCAATTAGTAAA+AGG | - | chr3.4:74968815-74968834 | None:intergenic | 25.0% |
| ! | AATGTTGGCAATTAGTAAAA+GGG | - | chr3.4:74968814-74968833 | None:intergenic | 25.0% |
| ! | AGAAATTCAAGAAGATAATG+AGG | + | chr3.4:74966059-74966078 | MS.gene074377:intron | 25.0% |
| ! | AGAACATTATTTGTTTGGTT+TGG | + | chr3.4:74964237-74964256 | MS.gene074377:intron | 25.0% |
| ! | ATCAAATAGCTACAAACTTA+AGG | - | chr3.4:74965976-74965995 | None:intergenic | 25.0% |
| ! | ATGTTTGAACAATGTTGTAA+AGG | + | chr3.4:74964878-74964897 | MS.gene074377:intron | 25.0% |
| ! | ATTGGTGAATGAATATAAGT+TGG | - | chr3.4:74967164-74967183 | None:intergenic | 25.0% |
| ! | CTAATCCAAAGATTTGAATA+AGG | - | chr3.4:74966330-74966349 | None:intergenic | 25.0% |
| ! | CTAGATCTAGAAAAAAAACT+GGG | - | chr3.4:74964407-74964426 | None:intergenic | 25.0% |
| ! | CTTACATCATAAGACTAATT+TGG | - | chr3.4:74964455-74964474 | None:intergenic | 25.0% |
| ! | GAAATTCAAGAAGATAATGA+GGG | + | chr3.4:74966060-74966079 | MS.gene074377:intron | 25.0% |
| ! | GAATATTTGGCCAATTTAAA+TGG | + | chr3.4:74964916-74964935 | MS.gene074377:intron | 25.0% |
| ! | GTAATGCAGTAAGAAATATT+TGG | - | chr3.4:74964100-74964119 | None:intergenic | 25.0% |
| ! | GTATCTCATTATTCTTAATC+TGG | + | chr3.4:74964188-74964207 | MS.gene074377:intron | 25.0% |
| ! | TAAAACTAAAAGAGTCTACA+CGG | - | chr3.4:74967004-74967023 | None:intergenic | 25.0% |
| ! | TAACTATACTAAATGATGTG+TGG | + | chr3.4:74965467-74965486 | MS.gene074377:intron | 25.0% |
| ! | TAAGTTTGTAGCTATTTGAT+TGG | + | chr3.4:74965976-74965995 | MS.gene074377:intron | 25.0% |
| ! | TACAAATTTGCACAAATAGT+CGG | - | chr3.4:74966224-74966243 | None:intergenic | 25.0% |
| ! | TAGAAACATTAAAAGACACT+AGG | - | chr3.4:74966644-74966663 | None:intergenic | 25.0% |
| ! | TATATTCTATTCAATTGCCA+GGG | + | chr3.4:74968050-74968069 | MS.gene074377:intron | 25.0% |
| ! | TATCTTCTTGAATTTCTGAA+TGG | - | chr3.4:74966056-74966075 | None:intergenic | 25.0% |
| ! | TCATTAAATTTAACCCTTGA+TGG | + | chr3.4:74966961-74966980 | MS.gene074377:intron | 25.0% |
| ! | TCTAGATCTAGAAAAAAAAC+TGG | - | chr3.4:74964408-74964427 | None:intergenic | 25.0% |
| ! | TGCAAATGATGAATGAAAAT+GGG | - | chr3.4:74969012-74969031 | None:intergenic | 25.0% |
| ! | TTATATTCTATTCAATTGCC+AGG | + | chr3.4:74968049-74968068 | MS.gene074377:intron | 25.0% |
| ! | TTCTCAAGAAAGATTCAATT+GGG | + | chr3.4:74967381-74967400 | MS.gene074377:intron | 25.0% |
| ! | TTGACATGAAATAACAAGAA+TGG | - | chr3.4:74967204-74967223 | None:intergenic | 25.0% |
| ! | TTGGAGACACAATAAAAAAA+TGG | - | chr3.4:74965567-74965586 | None:intergenic | 25.0% |
| ! | TTTCTCAAGAAAGATTCAAT+TGG | + | chr3.4:74967380-74967399 | MS.gene074377:intron | 25.0% |
| !! | AAAATTGATTCTCACATGTT+TGG | - | chr3.4:74964688-74964707 | None:intergenic | 25.0% |
| !! | ATTGTAGTTTTCAAAGTTAG+GGG | + | chr3.4:74965876-74965895 | MS.gene074377:intron | 25.0% |
| !! | ATTGTAGTTTTCATACTTAG+GGG | - | chr3.4:74965678-74965697 | None:intergenic | 25.0% |
| !! | GTAAATCATAGTCTCTATTT+TGG | - | chr3.4:74965530-74965549 | None:intergenic | 25.0% |
| !! | GTTTCAAGTAGAATCATATT+TGG | + | chr3.4:74964634-74964653 | MS.gene074377:intron | 25.0% |
| !! | TCTTCAATCTTTTCTAATAC+TGG | + | chr3.4:74967320-74967339 | MS.gene074377:intron | 25.0% |
| !! | TTATTGTGGCATTTAAAGTT+AGG | - | chr3.4:74965951-74965970 | None:intergenic | 25.0% |
| !! | TTTTCAAAATGTTGCGATTA+TGG | + | chr3.4:74965775-74965794 | MS.gene074377:intron | 25.0% |
| !! | TTTTGCGTAATTGGAATATT+TGG | + | chr3.4:74964903-74964922 | MS.gene074377:intron | 25.0% |
| !!! | ACTTTGTTCTAAAACTGTTA+AGG | - | chr3.4:74969070-74969089 | None:intergenic | 25.0% |
| !!! | AGTTTGATTTTTTTTTCTGC+AGG | + | chr3.4:74966372-74966391 | MS.gene074377:intron | 25.0% |
| !!! | ATTACATGCTGCTTATTTTA+AGG | - | chr3.4:74968986-74969005 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTTGCCCTTATTG+GGG | + | chr3.4:74967256-74967275 | MS.gene074377:intron | 25.0% |
| !!! | CAACATTTTGAAAAGATAAG+GGG | - | chr3.4:74965769-74965788 | None:intergenic | 25.0% |
| !!! | CAATTACCAAAAGTTTTTTC+AGG | - | chr3.4:74967920-74967939 | None:intergenic | 25.0% |
| !!! | GAATTTTTTTTTGCCCTTAT+TGG | + | chr3.4:74967254-74967273 | MS.gene074377:intron | 25.0% |
| !!! | GCAACATTTTGAAAAGATAA+GGG | - | chr3.4:74965770-74965789 | None:intergenic | 25.0% |
| !!! | TATTCTGTCTTTGTTTTTTC+CGG | + | chr3.4:74967704-74967723 | MS.gene074377:intron | 25.0% |
| !!! | TCTTTTTTTCTCTTAGATTC+TGG | + | chr3.4:74964144-74964163 | MS.gene074377:intron | 25.0% |
| !!! | TTCAGGTTGTTTTATTTTTG+GGG | + | chr3.4:74964816-74964835 | MS.gene074377:intron | 25.0% |
| !!! | TTTTTTTTCTAGATCTAGAC+TGG | + | chr3.4:74964409-74964428 | MS.gene074377:intron | 25.0% |
| AAAAAAAGAAACTAACGCCA+TGG | - | chr3.4:74964133-74964152 | None:intergenic | 30.0% | |
| AAAACTTAGCCAACACATAA+TGG | + | chr3.4:74968115-74968134 | MS.gene074377:intron | 30.0% | |
| AACCAAAAGTGAGTTATGTT+TGG | + | chr3.4:74964535-74964554 | MS.gene074377:intron | 30.0% | |
| AAGCAGAGTTTCAATTACTT+TGG | - | chr3.4:74965287-74965306 | None:intergenic | 30.0% | |
| AATAGACAAAATGCCATCAA+GGG | - | chr3.4:74966977-74966996 | None:intergenic | 30.0% | |
| AATGAGTATACAGCAATCAA+TGG | + | chr3.4:74969140-74969159 | MS.gene074377:CDS | 30.0% | |
| ACACAAACTACAAATAATCG+AGG | - | chr3.4:74964948-74964967 | None:intergenic | 30.0% | |
| ACATATTTCCCTTAAGTTAG+GGG | - | chr3.4:74965739-74965758 | None:intergenic | 30.0% | |
| ACCAAAGTGAATCAATACTA+AGG | - | chr3.4:74965005-74965024 | None:intergenic | 30.0% | |
| ACTGCATGCATAACTTTAAT+AGG | + | chr3.4:74965603-74965622 | MS.gene074377:intron | 30.0% | |
| AGAATAATTGAGATTGTCGT+TGG | - | chr3.4:74965394-74965413 | None:intergenic | 30.0% | |
| AGACAACACTTTACATAAGA+GGG | + | chr3.4:74969471-74969490 | MS.gene074377:CDS | 30.0% | |
| AGACATATTTCCCTTAAGTT+AGG | - | chr3.4:74965741-74965760 | None:intergenic | 30.0% | |
| ATACAGCAATCAATGGTTAT+GGG | + | chr3.4:74969147-74969166 | MS.gene074377:CDS | 30.0% | |
| ATATTCTATTCAATTGCCAG+GGG | + | chr3.4:74968051-74968070 | MS.gene074377:intron | 30.0% | |
| ATCCATGAACTAAAATCACA+AGG | - | chr3.4:74966674-74966693 | None:intergenic | 30.0% | |
| ATGTTGAAATCCAAGAAGTA+TGG | - | chr3.4:74965093-74965112 | None:intergenic | 30.0% | |
| ATGTTGGCAATTAGTAAAAG+GGG | - | chr3.4:74968813-74968832 | None:intergenic | 30.0% | |
| ATTAGGCTTCTCTATATTCT+TGG | + | chr3.4:74969094-74969113 | MS.gene074377:CDS | 30.0% | |
| ATTCTTCTATCTGGATTGTT+TGG | + | chr3.4:74968502-74968521 | MS.gene074377:CDS | 30.0% | |
| CAATGCATAAGAATTGAACT+AGG | + | chr3.4:74969328-74969347 | MS.gene074377:intron | 30.0% | |
| CTGCAAATGATGAATGAAAA+TGG | - | chr3.4:74969013-74969032 | None:intergenic | 30.0% | |
| CTGTTACATAGTTGCTAATT+TGG | + | chr3.4:74968200-74968219 | MS.gene074377:intron | 30.0% | |
| GACATATTTCCCTTAAGTTA+GGG | - | chr3.4:74965740-74965759 | None:intergenic | 30.0% | |
| GATAAAAATCTCCCCAATAA+GGG | - | chr3.4:74967270-74967289 | None:intergenic | 30.0% | |
| GTGAATCAATACTAAGGAAA+AGG | - | chr3.4:74964999-74965018 | None:intergenic | 30.0% | |
| GTGTTATGTAACATCACTAA+GGG | + | chr3.4:74964838-74964857 | MS.gene074377:intron | 30.0% | |
| TACCAACATAAGCAAAGAAT+AGG | - | chr3.4:74968910-74968929 | None:intergenic | 30.0% | |
| TAGACAACACTTTACATAAG+AGG | + | chr3.4:74969470-74969489 | MS.gene074377:CDS | 30.0% | |
| TAGTTTCATTGAAATTCAGC+TGG | - | chr3.4:74967810-74967829 | None:intergenic | 30.0% | |
| TATACAGCAATCAATGGTTA+TGG | + | chr3.4:74969146-74969165 | MS.gene074377:CDS | 30.0% | |
| TATCACTGTGTAGGAAAATT+TGG | + | chr3.4:74968836-74968855 | MS.gene074377:intron | 30.0% | |
| TATTCACAATTGCAATTGTG+TGG | + | chr3.4:74966816-74966835 | MS.gene074377:CDS | 30.0% | |
| TCAACTCTTCAAATAGTACT+AGG | + | chr3.4:74966109-74966128 | MS.gene074377:CDS | 30.0% | |
| TCAAGAAAACCAATATCTCA+AGG | - | chr3.4:74967408-74967427 | None:intergenic | 30.0% | |
| TCAAGTAGAATCATATTTGG+AGG | + | chr3.4:74964637-74964656 | MS.gene074377:intron | 30.0% | |
| TGATAAAAATCTCCCCAATA+AGG | - | chr3.4:74967271-74967290 | None:intergenic | 30.0% | |
| TTACATCAGATTGGAACATT+TGG | - | chr3.4:74966353-74966372 | None:intergenic | 30.0% | |
| TTAGGCTTCTCTATATTCTT+GGG | + | chr3.4:74969095-74969114 | MS.gene074377:CDS | 30.0% | |
| TTATGATGTAAGTGTGTGTT+TGG | + | chr3.4:74964463-74964482 | MS.gene074377:intron | 30.0% | |
| TTCATGATACTAAGCTACTA+TGG | - | chr3.4:74967858-74967877 | None:intergenic | 30.0% | |
| ! | ATATTCTATTTGCTGCTTGT+AGG | + | chr3.4:74965252-74965271 | MS.gene074377:intron | 30.0% |
| ! | ATATTTGGTAGTTGATCCTT+TGG | - | chr3.4:74964085-74964104 | None:intergenic | 30.0% |
| ! | ATCCAAACATAACTCACTTT+TGG | - | chr3.4:74964540-74964559 | None:intergenic | 30.0% |
| ! | ATCTGATTTATGCTTGTTAG+GGG | + | chr3.4:74968473-74968492 | MS.gene074377:intron | 30.0% |
| ! | CAACATTTTCTTGTAATGCT+CGG | + | chr3.4:74965107-74965126 | MS.gene074377:CDS | 30.0% |
| ! | CATCTGATTTATGCTTGTTA+GGG | + | chr3.4:74968472-74968491 | MS.gene074377:intron | 30.0% |
| ! | CATTTTCATTCATCATTTGC+AGG | + | chr3.4:74969011-74969030 | MS.gene074377:intron | 30.0% |
| ! | CTTTCAAAAAGTTGCGATTT+TGG | + | chr3.4:74965651-74965670 | MS.gene074377:intron | 30.0% |
| ! | CTTTCAAAAAGTTGCGATTT+TGG | - | chr3.4:74965670-74965651 | None:intergenic | 30.0% |
| ! | GAGGAATATGCCATTTAAAT+TGG | - | chr3.4:74964929-74964948 | None:intergenic | 30.0% |
| ! | GTAAAGGAATTTTGCGTAAT+TGG | + | chr3.4:74964894-74964913 | MS.gene074377:intron | 30.0% |
| ! | TTGAACTAGGATTTGTTCTT+TGG | + | chr3.4:74969341-74969360 | MS.gene074377:intron | 30.0% |
| ! | TTGTAGTTTTCAAAGTTAGG+GGG | + | chr3.4:74965877-74965896 | MS.gene074377:intron | 30.0% |
| ! | TTGTAGTTTTCATACTTAGG+GGG | - | chr3.4:74965677-74965696 | None:intergenic | 30.0% |
| !! | ACAAACTTAAGGTCTTATTG+TGG | - | chr3.4:74965965-74965984 | None:intergenic | 30.0% |
| !! | ACAAATGCTTTTGATTGGAA+TGG | - | chr3.4:74969427-74969446 | None:intergenic | 30.0% |
| !! | AGCAAGTTTTGATATGGAAA+TGG | + | chr3.4:74965191-74965210 | MS.gene074377:intron | 30.0% |
| !! | ATCGCAACTTTTTGAAAGAT+AGG | - | chr3.4:74965924-74965905 | None:intergenic | 30.0% |
| !! | CAAATGCTTTTGATTGGAAT+GGG | - | chr3.4:74969426-74969445 | None:intergenic | 30.0% |
| !! | CGCAACATTTTGAAAAGATA+AGG | - | chr3.4:74965771-74965790 | None:intergenic | 30.0% |
| !! | CGCAACTTTTTGAAAGATAA+GGG | + | chr3.4:74965907-74965926 | MS.gene074377:intron | 30.0% |
| !! | GCAACTTTTTGAAAGATAAG+GGG | + | chr3.4:74965908-74965927 | MS.gene074377:intron | 30.0% |
| !! | TCCTTAGTATTGATTCACTT+TGG | + | chr3.4:74965001-74965020 | MS.gene074377:intron | 30.0% |
| !! | TCGCAACTTTTTGAAAGATA+AGG | + | chr3.4:74965906-74965925 | MS.gene074377:intron | 30.0% |
| !! | TCGCAACTTTTTGAAAGATA+GGG | - | chr3.4:74965925-74965906 | None:intergenic | 30.0% |
| !! | TCTTATGTAAAGTGTTGTCT+AGG | - | chr3.4:74969471-74969490 | None:intergenic | 30.0% |
| !! | TTACACCTCTAGAATCAATT+TGG | + | chr3.4:74964706-74964725 | MS.gene074377:intron | 30.0% |
| !! | TTTTAATTGGGTCCTTATCA+TGG | - | chr3.4:74967079-74967098 | None:intergenic | 30.0% |
| !!! | CTCTTGTATTTTGAGTTTGT+AGG | + | chr3.4:74967484-74967503 | MS.gene074377:intron | 30.0% |
| !!! | GAGATATTGGTTTTCTTGAT+GGG | + | chr3.4:74967409-74967428 | MS.gene074377:intron | 30.0% |
| !!! | TGAGATATTGGTTTTCTTGA+TGG | + | chr3.4:74967408-74967427 | MS.gene074377:intron | 30.0% |
| AAACCAACAAGAGAAACCAA+TGG | - | chr3.4:74966422-74966441 | None:intergenic | 35.0% | |
| AAGCATAAATCAGATGCATG+AGG | - | chr3.4:74968468-74968487 | None:intergenic | 35.0% | |
| AATACCAGCAATATAAGCTC+TGG | - | chr3.4:74966586-74966605 | None:intergenic | 35.0% | |
| AATAGGCTAAAGTGCAACTT+TGG | + | chr3.4:74965620-74965639 | MS.gene074377:intron | 35.0% | |
| AATTTGCACAAATAGTCGGA+AGG | - | chr3.4:74966220-74966239 | None:intergenic | 35.0% | |
| ACAATCTCAATTATTCTCGC+TGG | + | chr3.4:74965397-74965416 | MS.gene074377:CDS | 35.0% | |
| AGAGCATATTTCCCTAAACA+TGG | - | chr3.4:74965710-74965729 | None:intergenic | 35.0% | |
| AGCATATTTCCCTAAACATG+GGG | - | chr3.4:74965708-74965727 | None:intergenic | 35.0% | |
| AGTTCCATATCCCTTTCAAT+GGG | + | chr3.4:74967512-74967531 | MS.gene074377:CDS | 35.0% | |
| ATAGTGACACCATTATGTGT+TGG | - | chr3.4:74968127-74968146 | None:intergenic | 35.0% | |
| ATTGCTGGTATTTGTTTCAC+AGG | + | chr3.4:74966594-74966613 | MS.gene074377:CDS | 35.0% | |
| CAACATTTCTATCACTGTGT+AGG | + | chr3.4:74968827-74968846 | MS.gene074377:intron | 35.0% | |
| CAATAGACAAAATGCCATCA+AGG | - | chr3.4:74966978-74966997 | None:intergenic | 35.0% | |
| CATATTTCCCTTAAGTTAGG+GGG | - | chr3.4:74965738-74965757 | None:intergenic | 35.0% | |
| CGAGATCAAATATACAAGCA+TGG | - | chr3.4:74967027-74967046 | None:intergenic | 35.0% | |
| CTACACAGTGATAGAAATGT+TGG | - | chr3.4:74968829-74968848 | None:intergenic | 35.0% | |
| GACAAGTACAAGTCATTCAA+GGG | + | chr3.4:74969532-74969551 | MS.gene074377:CDS | 35.0% | |
| GAGCATATTTCCCTAAACAT+GGG | - | chr3.4:74965709-74965728 | None:intergenic | 35.0% | |
| GAGCTTTCATTGCTGTATAT+AGG | + | chr3.4:74968255-74968274 | MS.gene074377:CDS | 35.0% | |
| GAGGGATTCATCTATTAGAA+AGG | + | chr3.4:74969489-74969508 | MS.gene074377:CDS | 35.0% | |
| GCATCTGATTTATGCTTGTT+AGG | + | chr3.4:74968471-74968490 | MS.gene074377:intron | 35.0% | |
| GCGATTTAAAAGCTTCTGAT+TGG | + | chr3.4:74967046-74967065 | MS.gene074377:intron | 35.0% | |
| GCTATTTGATTGGAACTGTT+AGG | + | chr3.4:74965986-74966005 | MS.gene074377:intron | 35.0% | |
| GTTGCTAAATGTGTAGAGAT+TGG | + | chr3.4:74966556-74966575 | MS.gene074377:CDS | 35.0% | |
| TAAAAGGGGAGAAATGTACT+CGG | - | chr3.4:74968799-74968818 | None:intergenic | 35.0% | |
| TAAGAATAGAAGGTGGCAAT+GGG | - | chr3.4:74968295-74968314 | None:intergenic | 35.0% | |
| TACGTGACAGTTCAATGATA+TGG | + | chr3.4:74969393-74969412 | MS.gene074377:intron | 35.0% | |
| TCAATACTAAGGAAAAGGAG+AGG | - | chr3.4:74964994-74965013 | None:intergenic | 35.0% | |
| TCATCTATTAGAAAGGACAG+AGG | + | chr3.4:74969496-74969515 | MS.gene074377:CDS | 35.0% | |
| TCTATTGTGTTTGTGCTCTA+AGG | - | chr3.4:74967358-74967377 | None:intergenic | 35.0% | |
| TCTTCTGATAAGACCTCAAT+CGG | - | chr3.4:74965445-74965464 | None:intergenic | 35.0% | |
| TGAAATCACACAACTAACCA+AGG | - | chr3.4:74966944-74966963 | None:intergenic | 35.0% | |
| TGCCTATTCTTTGCTTATGT+TGG | + | chr3.4:74968905-74968924 | MS.gene074377:CDS | 35.0% | |
| TGTTGCTGGTATTAACACAT+TGG | + | chr3.4:74965309-74965328 | MS.gene074377:CDS | 35.0% | |
| ! | AACTTTGAAAACTGCTGAGA+AGG | - | chr3.4:74965845-74965864 | None:intergenic | 35.0% |
| ! | AGTGTGTGATTGTTTGCTTT+TGG | - | chr3.4:74965586-74965605 | None:intergenic | 35.0% |
| ! | CAAATAGTACTAGGCTTTAG+TGG | + | chr3.4:74966118-74966137 | MS.gene074377:CDS | 35.0% |
| ! | CTCAGCAGTTTTCAAAGTTA+GGG | + | chr3.4:74965846-74965865 | MS.gene074377:intron | 35.0% |
| ! | CTTTTAACCCCCTAACTTAA+GGG | + | chr3.4:74965728-74965747 | MS.gene074377:intron | 35.0% |
| ! | GATCTGGTTCATTACTGAAT+CGG | - | chr3.4:74965423-74965442 | None:intergenic | 35.0% |
| ! | GGAGATTTTTATCACTGAAG+TGG | + | chr3.4:74967277-74967296 | MS.gene074377:intron | 35.0% |
| ! | GGATTGTTTGGAACAATTAG+CGG | + | chr3.4:74968514-74968533 | MS.gene074377:CDS | 35.0% |
| ! | GGTGTTATGTAACATCACTA+AGG | + | chr3.4:74964837-74964856 | MS.gene074377:intron | 35.0% |
| ! | TCAGCAGTTTTCAAAGTTAG+GGG | + | chr3.4:74965847-74965866 | MS.gene074377:intron | 35.0% |
| ! | TCTCAGCAGTTTTCAAAGTT+AGG | + | chr3.4:74965845-74965864 | MS.gene074377:intron | 35.0% |
| ! | TCTGATTTATGCTTGTTAGG+GGG | + | chr3.4:74968474-74968493 | MS.gene074377:intron | 35.0% |
| ! | TCTTTTAACCCCCTAACTTA+AGG | + | chr3.4:74965727-74965746 | MS.gene074377:intron | 35.0% |
| ! | TGTACGAATTAGGTTTTCCT+GGG | + | chr3.4:74966447-74966466 | MS.gene074377:CDS | 35.0% |
| ! | TTGTACGAATTAGGTTTTCC+TGG | + | chr3.4:74966446-74966465 | MS.gene074377:CDS | 35.0% |
| ! | TTTTATCAGTGCATTGAAGC+TGG | + | chr3.4:74967734-74967753 | MS.gene074377:intron | 35.0% |
| !! | AGGACTAGCAAGTTTTGATA+TGG | + | chr3.4:74965185-74965204 | MS.gene074377:intron | 35.0% |
| !! | ATGGTTGATTCTTTTCCTCA+AGG | + | chr3.4:74967957-74967976 | MS.gene074377:intron | 35.0% |
| !! | CAATCAAAAGCATTTGTTGC+GGG | + | chr3.4:74969430-74969449 | MS.gene074377:CDS | 35.0% |
| !! | CCAATCAAAAGCATTTGTTG+CGG | + | chr3.4:74969429-74969448 | MS.gene074377:CDS | 35.0% |
| !! | CGCAACTTTTTGAAAGATAG+GGG | - | chr3.4:74965647-74965666 | None:intergenic | 35.0% |
| !! | GCAACTTTTTGAAAGATAGG+GGG | - | chr3.4:74965646-74965665 | None:intergenic | 35.0% |
| !! | GGCCATTTTGAAAAGATAAG+GGG | - | chr3.4:74965801-74965820 | None:intergenic | 35.0% |
| !! | GGGCCATTTTGAAAAGATAA+GGG | - | chr3.4:74965802-74965821 | None:intergenic | 35.0% |
| !! | GTATACTCATTGAAGTACTG+TGG | - | chr3.4:74969131-74969150 | None:intergenic | 35.0% |
| !! | TGGTTGATTCTTTTCCTCAA+GGG | + | chr3.4:74967958-74967977 | MS.gene074377:intron | 35.0% |
| !!! | GCTGCTTATTTTAAGGATCA+TGG | - | chr3.4:74968979-74968998 | None:intergenic | 35.0% |
| !!! | TCTTTGTTTTTTCCGGAACT+GGG | + | chr3.4:74967711-74967730 | MS.gene074377:intron | 35.0% |
| !!! | TGGTTTCTCTTGTTGGTTTT+GGG | + | chr3.4:74966423-74966442 | MS.gene074377:CDS | 35.0% |
| !!! | TTGGTTTCTCTTGTTGGTTT+TGG | + | chr3.4:74966422-74966441 | MS.gene074377:CDS | 35.0% |
| AAAAGAAACTAACGCCATGG+AGG | - | chr3.4:74964130-74964149 | None:intergenic | 40.0% | |
| AACGAAAGATGCCATCATCA+TGG | - | chr3.4:74967571-74967590 | None:intergenic | 40.0% | |
| AAGAATAGAAGGTGGCAATG+GGG | - | chr3.4:74968294-74968313 | None:intergenic | 40.0% | |
| ACATTGGTGCAAACACTCTT+TGG | + | chr3.4:74965325-74965344 | MS.gene074377:CDS | 40.0% | |
| AGCCTTCGACTACATGTTTA+CGG | + | chr3.4:74966473-74966492 | MS.gene074377:intron | 40.0% | |
| ATACCCCGACTAAGAATAGA+AGG | - | chr3.4:74968305-74968324 | None:intergenic | 40.0% | |
| ATCTTTCGTTGCTCTTGTAG+AGG | + | chr3.4:74967581-74967600 | MS.gene074377:CDS | 40.0% | |
| CAATTGGGTCCTTGAGATAT+TGG | + | chr3.4:74967396-74967415 | MS.gene074377:intron | 40.0% | |
| CTAAGAATAGAAGGTGGCAA+TGG | - | chr3.4:74968296-74968315 | None:intergenic | 40.0% | |
| GAGTTCCATATCCCTTTCAA+TGG | + | chr3.4:74967511-74967530 | MS.gene074377:CDS | 40.0% | |
| GATTACCTGCAGTAATTGGA+GGG | + | chr3.4:74965353-74965372 | MS.gene074377:CDS | 40.0% | |
| GCATATTTCCCTAAACATGG+GGG | - | chr3.4:74965707-74965726 | None:intergenic | 40.0% | |
| GGACAAGTACAAGTCATTCA+AGG | + | chr3.4:74969531-74969550 | MS.gene074377:CDS | 40.0% | |
| GGTCTCACATTCTTACTAAG+TGG | + | chr3.4:74966165-74966184 | MS.gene074377:intron | 40.0% | |
| GTTAGGCTAAAGTGCAACTT+TGG | - | chr3.4:74965934-74965953 | None:intergenic | 40.0% | |
| GTTCCATATCCCTTTCAATG+GGG | + | chr3.4:74967513-74967532 | MS.gene074377:CDS | 40.0% | |
| GTTTCAGTCTTACACAGACA+CGG | - | chr3.4:74968545-74968564 | None:intergenic | 40.0% | |
| TAATGAACCAGATCCGATTG+AGG | + | chr3.4:74965429-74965448 | MS.gene074377:CDS | 40.0% | |
| TACAATGCAGCAATGATTGC+AGG | - | chr3.4:74968884-74968903 | None:intergenic | 40.0% | |
| TATGCTGTTCTACTCACTGT+TGG | + | chr3.4:74966842-74966861 | MS.gene074377:CDS | 40.0% | |
| TCAACATCGATGCTTGTGTT+GGG | + | chr3.4:74966528-74966547 | MS.gene074377:intron | 40.0% | |
| TCACGATTACCTGCAGTAAT+TGG | + | chr3.4:74965349-74965368 | MS.gene074377:CDS | 40.0% | |
| TGAAATTCAGCTGGCACAAA+AGG | - | chr3.4:74967801-74967820 | None:intergenic | 40.0% | |
| TGAGATTGTCGTTGGAACAT+AGG | - | chr3.4:74965386-74965405 | None:intergenic | 40.0% | |
| TGCCACCTTCTATTCTTAGT+CGG | + | chr3.4:74968297-74968316 | MS.gene074377:CDS | 40.0% | |
| TGTTGGGCGTTAGTCATAAA+TGG | + | chr3.4:74967938-74967957 | MS.gene074377:intron | 40.0% | |
| TTGATGGGAATCTACGTTCT+AGG | + | chr3.4:74967424-74967443 | MS.gene074377:intron | 40.0% | |
| ! | ATTTATGCTTGTTAGGGGGT+TGG | + | chr3.4:74968478-74968497 | MS.gene074377:intron | 40.0% |
| ! | CAGCAGTTTTCAAAGTTAGG+GGG | + | chr3.4:74965848-74965867 | MS.gene074377:intron | 40.0% |
| ! | CCGCAACAAATGCTTTTGAT+TGG | - | chr3.4:74969432-74969451 | None:intergenic | 40.0% |
| ! | GGCCCCTTATCTTTTCAAAA+TGG | + | chr3.4:74965796-74965815 | MS.gene074377:intron | 40.0% |
| ! | GGGATCCAAATTGATTCTAG+AGG | - | chr3.4:74964714-74964733 | None:intergenic | 40.0% |
| ! | GTACGAATTAGGTTTTCCTG+GGG | + | chr3.4:74966448-74966467 | MS.gene074377:CDS | 40.0% |
| ! | TCTTTTTGTACACAGTCCAC+TGG | + | chr3.4:74968233-74968252 | MS.gene074377:intron | 40.0% |
| ! | TGTGGTTCATCTGATTTTGC+TGG | - | chr3.4:74964052-74964071 | None:intergenic | 40.0% |
| ! | TTCTATTTGCTGCTTGTAGG+CGG | + | chr3.4:74965255-74965274 | MS.gene074377:intron | 40.0% |
| ! | TTTGGTAGTTGATCCTTTGG+TGG | - | chr3.4:74964082-74964101 | None:intergenic | 40.0% |
| !! | AATTTTGGTCCCCCATGTTT+AGG | + | chr3.4:74965695-74965714 | MS.gene074377:intron | 40.0% |
| !! | ATTTTGGTCCCCCATGTTTA+GGG | + | chr3.4:74965696-74965715 | MS.gene074377:intron | 40.0% |
| !! | GGGGCCATTTTGAAAAGATA+AGG | - | chr3.4:74965803-74965822 | None:intergenic | 40.0% |
| !! | GTTCCATTGGTTTCTCTTGT+TGG | + | chr3.4:74966416-74966435 | MS.gene074377:CDS | 40.0% |
| !! | TTCAAAATGGCCCCTTGTTT+TGG | + | chr3.4:74965809-74965828 | MS.gene074377:intron | 40.0% |
| !!! | CAGAGAAAATGCTGGTCTTT+TGG | + | chr3.4:74968648-74968667 | MS.gene074377:intron | 40.0% |
| !!! | CGCCTTGTGATTTTAGTTCA+TGG | + | chr3.4:74966669-74966688 | MS.gene074377:intron | 40.0% |
| !!! | GAAACTCTGCTTTTTGTTGC+TGG | + | chr3.4:74965295-74965314 | MS.gene074377:CDS | 40.0% |
| !!! | GGTTTTGGGTTGTACGAATT+AGG | + | chr3.4:74966437-74966456 | MS.gene074377:CDS | 40.0% |
| !!! | GTCTTTGTTTTTTCCGGAAC+TGG | + | chr3.4:74967710-74967729 | MS.gene074377:intron | 40.0% |
| AAGATAATGAGGGCAGTCCA+GGG | + | chr3.4:74966070-74966089 | MS.gene074377:CDS | 45.0% | |
| AATGATTGCAGGTGGGATAG+AGG | - | chr3.4:74968873-74968892 | None:intergenic | 45.0% | |
| AATGCAGCAATGATTGCAGG+TGG | - | chr3.4:74968881-74968900 | None:intergenic | 45.0% | |
| AATTGGGTCCTTATCATGGC+AGG | - | chr3.4:74967075-74967094 | None:intergenic | 45.0% | |
| ACCAATGGAACAGCTGAAAG+TGG | - | chr3.4:74966407-74966426 | None:intergenic | 45.0% | |
| ACCTTGCAACATTACGCCAA+AGG | - | chr3.4:74966144-74966163 | None:intergenic | 45.0% | |
| ACTAAGGAAAAGGAGAGGCT+GGG | - | chr3.4:74964989-74965008 | None:intergenic | 45.0% | |
| ACTGCCAGAGCTTATATTGC+TGG | + | chr3.4:74966579-74966598 | MS.gene074377:CDS | 45.0% | |
| ACTGCTCTTGTTCCTCAGAT+GGG | + | chr3.4:74965149-74965168 | MS.gene074377:CDS | 45.0% | |
| AGAGTTGTGCAGATATCTGC+TGG | + | chr3.4:74968694-74968713 | MS.gene074377:CDS | 45.0% | |
| AGATGGGAGGTGGAAATGTA+AGG | + | chr3.4:74965165-74965184 | MS.gene074377:intron | 45.0% | |
| ATCTGAGGAACAAGAGCAGT+GGG | - | chr3.4:74965149-74965168 | None:intergenic | 45.0% | |
| ATGCAGCAATGATTGCAGGT+GGG | - | chr3.4:74968880-74968899 | None:intergenic | 45.0% | |
| ATTGGGTCCTTATCATGGCA+GGG | - | chr3.4:74967074-74967093 | None:intergenic | 45.0% | |
| CACCGTAAACATGTAGTCGA+AGG | - | chr3.4:74966478-74966497 | None:intergenic | 45.0% | |
| CATTCATCATTTGCAGGAGC+TGG | + | chr3.4:74969017-74969036 | MS.gene074377:intron | 45.0% | |
| CCACCTTCTATTCTTAGTCG+GGG | + | chr3.4:74968299-74968318 | MS.gene074377:CDS | 45.0% | |
| CGATTACCTGCAGTAATTGG+AGG | + | chr3.4:74965352-74965371 | MS.gene074377:CDS | 45.0% | |
| CTCAACATCGATGCTTGTGT+TGG | + | chr3.4:74966527-74966546 | MS.gene074377:intron | 45.0% | |
| CTGTTCTACTCACTGTTGGA+GGG | + | chr3.4:74966846-74966865 | MS.gene074377:CDS | 45.0% | |
| CTTCGACTACATGTTTACGG+TGG | + | chr3.4:74966476-74966495 | MS.gene074377:intron | 45.0% | |
| GAAAGGACAGAGGCAAACAT+TGG | + | chr3.4:74969506-74969525 | MS.gene074377:CDS | 45.0% | |
| GACTTATAGATGCTGCTCCT+TGG | + | chr3.4:74966924-74966943 | MS.gene074377:CDS | 45.0% | |
| GATAAGACCTCAATCGGATC+TGG | - | chr3.4:74965439-74965458 | None:intergenic | 45.0% | |
| GCCACCTTCTATTCTTAGTC+GGG | + | chr3.4:74968298-74968317 | MS.gene074377:CDS | 45.0% | |
| TAAGACCCTCCAATTACTGC+AGG | - | chr3.4:74965361-74965380 | None:intergenic | 45.0% | |
| TACAGCAATGAAAGCTCCAG+TGG | - | chr3.4:74968252-74968271 | None:intergenic | 45.0% | |
| TACTAAGGAAAAGGAGAGGC+TGG | - | chr3.4:74964990-74965009 | None:intergenic | 45.0% | |
| TCCACTTTCAGCTGTTCCAT+TGG | + | chr3.4:74966403-74966422 | MS.gene074377:CDS | 45.0% | |
| TGTGCCACATGTGTTGCATT+CGG | + | chr3.4:74966763-74966782 | MS.gene074377:CDS | 45.0% | |
| TGTTCTACTCACTGTTGGAG+GGG | + | chr3.4:74966847-74966866 | MS.gene074377:CDS | 45.0% | |
| TTCTATTCAATTGCCAGGGG+CGG | + | chr3.4:74968054-74968073 | MS.gene074377:intron | 45.0% | |
| TTGGCGTAATGTTGCAAGGT+TGG | + | chr3.4:74966144-74966163 | MS.gene074377:intron | 45.0% | |
| TTTCCCGAATGCAACACATG+TGG | - | chr3.4:74966770-74966789 | None:intergenic | 45.0% | |
| TTTCCCTGCAGAGAAAATGC+TGG | + | chr3.4:74968640-74968659 | MS.gene074377:intron | 45.0% | |
| TTTCGGTGGAGAACCGTTAT+AGG | - | chr3.4:74966873-74966892 | None:intergenic | 45.0% | |
| ! | AAGACCAGCATTTTCTCTGC+AGG | - | chr3.4:74968647-74968666 | None:intergenic | 45.0% |
| ! | AGACCAGCATTTTCTCTGCA+GGG | - | chr3.4:74968646-74968665 | None:intergenic | 45.0% |
| ! | AGTTGATCCTTTGGTGGATG+TGG | - | chr3.4:74964076-74964095 | None:intergenic | 45.0% |
| ! | GCACTGATAAAACCCAGTTC+CGG | - | chr3.4:74967726-74967745 | None:intergenic | 45.0% |
| ! | TACTAGGCTTTAGTGGCCTT+TGG | + | chr3.4:74966125-74966144 | MS.gene074377:CDS | 45.0% |
| !! | AAGCAACAATAAGAGCACCC+TGG | - | chr3.4:74966090-74966109 | None:intergenic | 45.0% |
| !! | GACTGTTTCTATCTCCCTTG+AGG | - | chr3.4:74967975-74967994 | None:intergenic | 45.0% |
| !! | AATTAAAAAATATATTATTC+AGG | + | chr3.4:74964799-74964818 | MS.gene074377:intron | 5.0% |
| !!! | TTTTAAATAAGTTTTTAATT+GGG | - | chr3.4:74967091-74967110 | None:intergenic | 5.0% |
| !!! | TTTTTAAATAAGTTTTTAAT+TGG | - | chr3.4:74967092-74967111 | None:intergenic | 5.0% |
| ACACAGGTGGAAGATGGGTA+TGG | + | chr3.4:74969177-74969196 | MS.gene074377:intron | 50.0% | |
| ACATTTCCACCTCCCATCTG+AGG | - | chr3.4:74965164-74965183 | None:intergenic | 50.0% | |
| ACCACAACCACATCCACCAA+AGG | + | chr3.4:74964066-74964085 | MS.gene074377:CDS | 50.0% | |
| ACTGTTGGAGGGGCCTATAA+CGG | + | chr3.4:74966857-74966876 | MS.gene074377:CDS | 50.0% | |
| AGAAACTAACGCCATGGAGG+AGG | - | chr3.4:74964127-74964146 | None:intergenic | 50.0% | |
| AGGACAGAGGCAAACATTGG+TGG | + | chr3.4:74969509-74969528 | MS.gene074377:CDS | 50.0% | |
| AGTCCACACAGGTGGAAGAT+GGG | + | chr3.4:74969172-74969191 | MS.gene074377:CDS | 50.0% | |
| ATACCCATCTTCCACCTGTG+TGG | - | chr3.4:74969178-74969197 | None:intergenic | 50.0% | |
| ATTGGTCCCCTGCCATGATA+AGG | + | chr3.4:74967064-74967083 | MS.gene074377:intron | 50.0% | |
| CAAGGGTGACACAAGAAGTG+AGG | + | chr3.4:74969549-74969568 | MS.gene074377:CDS | 50.0% | |
| CACTGCTCTTGTTCCTCAGA+TGG | + | chr3.4:74965148-74965167 | MS.gene074377:CDS | 50.0% | |
| CATCTGAGGAACAAGAGCAG+TGG | - | chr3.4:74965150-74965169 | None:intergenic | 50.0% | |
| CCCCGACTAAGAATAGAAGG+TGG | - | chr3.4:74968302-74968321 | None:intergenic | 50.0% | |
| CGACACGTGTCCAAAACAAG+GGG | - | chr3.4:74965822-74965841 | None:intergenic | 50.0% | |
| GAAGATAATGAGGGCAGTCC+AGG | + | chr3.4:74966069-74966088 | MS.gene074377:CDS | 50.0% | |
| GCATTACTAGTCCTCCTCCA+TGG | + | chr3.4:74964113-74964132 | MS.gene074377:CDS | 50.0% | |
| GCCTTTGGCGTAATGTTGCA+AGG | + | chr3.4:74966140-74966159 | MS.gene074377:CDS | 50.0% | |
| GCGACACGTGTCCAAAACAA+GGG | - | chr3.4:74965823-74965842 | None:intergenic | 50.0% | |
| GCTCCCCATTGAAAGGGATA+TGG | - | chr3.4:74967519-74967538 | None:intergenic | 50.0% | |
| GCTGTTCTACTCACTGTTGG+AGG | + | chr3.4:74966845-74966864 | MS.gene074377:CDS | 50.0% | |
| GCTTCGCCTGCATCAAATGT+AGG | - | chr3.4:74967543-74967562 | None:intergenic | 50.0% | |
| GGACAGAGGCAAACATTGGT+GGG | + | chr3.4:74969510-74969529 | MS.gene074377:CDS | 50.0% | |
| GGGAGAAATGTACTCGGATG+TGG | - | chr3.4:74968793-74968812 | None:intergenic | 50.0% | |
| GTAGGTGCTCCCCATTGAAA+GGG | - | chr3.4:74967525-74967544 | None:intergenic | 50.0% | |
| GTGCCACATGTGTTGCATTC+GGG | + | chr3.4:74966764-74966783 | MS.gene074377:CDS | 50.0% | |
| TAAGTCCAGCACGATCAGTG+CGG | - | chr3.4:74966910-74966929 | None:intergenic | 50.0% | |
| TCATCATTTGCAGGAGCTGG+AGG | + | chr3.4:74969020-74969039 | MS.gene074377:intron | 50.0% | |
| TCGATGCTTGTGTTGGGTGT+AGG | + | chr3.4:74966534-74966553 | MS.gene074377:intron | 50.0% | |
| TCTATTCAATTGCCAGGGGC+GGG | + | chr3.4:74968055-74968074 | MS.gene074377:intron | 50.0% | |
| TGTAGGTGCTCCCCATTGAA+AGG | - | chr3.4:74967526-74967545 | None:intergenic | 50.0% | |
| TTGGGTCCTTATCATGGCAG+GGG | - | chr3.4:74967073-74967092 | None:intergenic | 50.0% | |
| ! | AGCATTTGTTGCGGGTGTTG+TGG | + | chr3.4:74969438-74969457 | MS.gene074377:CDS | 50.0% |
| ! | CAGGATGTCTGTGTTTTCGG+TGG | - | chr3.4:74966887-74966906 | None:intergenic | 50.0% |
| ! | CGAAGCGTTTGCCATGATGA+TGG | + | chr3.4:74967557-74967576 | MS.gene074377:CDS | 50.0% |
| ! | CGGCAGGATGTCTGTGTTTT+CGG | - | chr3.4:74966890-74966909 | None:intergenic | 50.0% |
| ! | GGAGCACCTACATTTGATGC+AGG | + | chr3.4:74967534-74967553 | MS.gene074377:CDS | 50.0% |
| ! | GGGGTTGGCATTCTTCTATC+TGG | + | chr3.4:74968493-74968512 | MS.gene074377:CDS | 50.0% |
| ! | TCCTTTGGTGGATGTGGTTG+TGG | - | chr3.4:74964070-74964089 | None:intergenic | 50.0% |
| !! | GGGACATTTTGATGCAGCTG+AGG | + | chr3.4:74965067-74965086 | MS.gene074377:intron | 50.0% |
| !!! | CTTTTGGCTCTGACACGTGT+TGG | + | chr3.4:74968664-74968683 | MS.gene074377:CDS | 50.0% |
| CAGTCCACACAGGTGGAAGA+TGG | + | chr3.4:74969171-74969190 | MS.gene074377:CDS | 55.0% | |
| CATCTTCCACCTGTGTGGAC+TGG | - | chr3.4:74969173-74969192 | None:intergenic | 55.0% | |
| CTATTCAATTGCCAGGGGCG+GGG | + | chr3.4:74968056-74968075 | MS.gene074377:intron | 55.0% | |
| CTTGTTCCTCAGATGGGAGG+TGG | + | chr3.4:74965155-74965174 | MS.gene074377:CDS | 55.0% | |
| GCAGCTGAGGCCATACTTCT+TGG | + | chr3.4:74965080-74965099 | MS.gene074377:intron | 55.0% | |
| GCTCTTGTTCCTCAGATGGG+AGG | + | chr3.4:74965152-74965171 | MS.gene074377:CDS | 55.0% | |
| GGCGACACGTGTCCAAAACA+AGG | - | chr3.4:74965824-74965843 | None:intergenic | 55.0% | |
| TATTCAATTGCCAGGGGCGG+GGG | + | chr3.4:74968057-74968076 | MS.gene074377:intron | 55.0% | |
| TGTAGTCGAAGGCTTACCCC+AGG | - | chr3.4:74966467-74966486 | None:intergenic | 55.0% | |
| ! | TTGCTGCTTGTAGGCGGAGA+AGG | + | chr3.4:74965261-74965280 | MS.gene074377:intron | 55.0% |
| GGTTATGGGCCAGTCCACAC+AGG | + | chr3.4:74969161-74969180 | MS.gene074377:CDS | 60.0% | |
| TATGGGCCAGTCCACACAGG+TGG | + | chr3.4:74969164-74969183 | MS.gene074377:CDS | 60.0% | |
| AATTGCCAGGGGCGGGGGAT+TGG | + | chr3.4:74968062-74968081 | MS.gene074377:intron | 65.0% | |
| TCCAGCACGATCAGTGCGGC+AGG | - | chr3.4:74966906-74966925 | None:intergenic | 65.0% | |
| TTTGACCAATCCCCCGCCCC+TGG | - | chr3.4:74968070-74968089 | None:intergenic | 65.0% | |
| ! | TCCTGCCGCACTGATCGTGC+TGG | + | chr3.4:74966902-74966921 | MS.gene074377:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 74964028 | 74969621 | 74964028 | ID=MS.gene074377 |
| chr3.4 | mRNA | 74964028 | 74969621 | 74964028 | ID=MS.gene074377.t1;Parent=MS.gene074377 |
| chr3.4 | exon | 74964028 | 74964136 | 74964028 | ID=MS.gene074377.t1.exon1;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74964028 | 74964136 | 74964028 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| chr3.4 | exon | 74965084 | 74965181 | 74965084 | ID=MS.gene074377.t1.exon2;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74965084 | 74965181 | 74965084 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| chr3.4 | exon | 74965274 | 74965450 | 74965274 | ID=MS.gene074377.t1.exon3;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74965274 | 74965450 | 74965274 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| chr3.4 | exon | 74966061 | 74966161 | 74966061 | ID=MS.gene074377.t1.exon4;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74966061 | 74966161 | 74966061 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| chr3.4 | exon | 74966394 | 74966469 | 74966394 | ID=MS.gene074377.t1.exon5;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74966394 | 74966469 | 74966394 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| chr3.4 | exon | 74966556 | 74966615 | 74966556 | ID=MS.gene074377.t1.exon6;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74966556 | 74966615 | 74966556 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| chr3.4 | exon | 74966761 | 74966945 | 74966761 | ID=MS.gene074377.t1.exon7;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74966761 | 74966945 | 74966761 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| chr3.4 | exon | 74967506 | 74967602 | 74967506 | ID=MS.gene074377.t1.exon8;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74967506 | 74967602 | 74967506 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| chr3.4 | exon | 74968248 | 74968334 | 74968248 | ID=MS.gene074377.t1.exon9;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74968248 | 74968334 | 74968248 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| chr3.4 | exon | 74968493 | 74968551 | 74968493 | ID=MS.gene074377.t1.exon10;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74968493 | 74968551 | 74968493 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| chr3.4 | exon | 74968651 | 74968742 | 74968651 | ID=MS.gene074377.t1.exon11;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74968651 | 74968742 | 74968651 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| chr3.4 | exon | 74968849 | 74968926 | 74968849 | ID=MS.gene074377.t1.exon12;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74968849 | 74968926 | 74968849 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| chr3.4 | exon | 74969033 | 74969193 | 74969033 | ID=MS.gene074377.t1.exon13;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74969033 | 74969193 | 74969033 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| chr3.4 | exon | 74969403 | 74969621 | 74969403 | ID=MS.gene074377.t1.exon14;Parent=MS.gene074377.t1 |
| chr3.4 | CDS | 74969403 | 74969621 | 74969403 | ID=cds.MS.gene074377.t1;Parent=MS.gene074377.t1 |
| Gene Sequence |
| Protein sequence |
