Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25932.t1 | XP_013461026.1 | 99.6 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 4.20E-304 | 1053.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25932.t1 | Q27GI3 | 86.1 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 8.2e-272 | 937.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25932.t1 | A0A072VA43 | 99.6 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 3.1e-304 | 1053.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049418 | MS.gene25932 | 0.821991 | 3.01E-53 | -1.69E-46 |
MS.gene049697 | MS.gene25932 | 0.826619 | 2.46E-54 | -1.69E-46 |
MS.gene050630 | MS.gene25932 | 0.80388 | 2.82E-49 | -1.69E-46 |
MS.gene050667 | MS.gene25932 | 0.853455 | 2.36E-61 | -1.69E-46 |
MS.gene051067 | MS.gene25932 | 0.824578 | 7.48E-54 | -1.69E-46 |
MS.gene051087 | MS.gene25932 | 0.809413 | 1.92E-50 | -1.69E-46 |
MS.gene052367 | MS.gene25932 | 0.821064 | 4.92E-53 | -1.69E-46 |
MS.gene053283 | MS.gene25932 | 0.81449 | 1.50E-51 | -1.69E-46 |
MS.gene053500 | MS.gene25932 | 0.824465 | 7.95E-54 | -1.69E-46 |
MS.gene054614 | MS.gene25932 | 0.816861 | 4.45E-52 | -1.69E-46 |
MS.gene056041 | MS.gene25932 | 0.805855 | 1.09E-49 | -1.69E-46 |
MS.gene056520 | MS.gene25932 | 0.806254 | 8.99E-50 | -1.69E-46 |
MS.gene057669 | MS.gene25932 | 0.807269 | 5.49E-50 | -1.69E-46 |
MS.gene060473 | MS.gene25932 | 0.802225 | 6.21E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene25932 | MS.gene71606 | PPI |
MS.gene25932 | MS.gene023585 | PPI |
MS.gene25932 | MS.gene012865 | PPI |
MS.gene25932 | MS.gene044204 | PPI |
MS.gene25932 | MS.gene020517 | PPI |
MS.gene015655 | MS.gene25932 | PPI |
MS.gene25932 | MS.gene59470 | PPI |
MS.gene25932 | MS.gene052677 | PPI |
MS.gene25932 | MS.gene27811 | PPI |
MS.gene25932 | MS.gene015069 | PPI |
MS.gene25932 | MS.gene25185 | PPI |
MS.gene25932 | MS.gene68064 | PPI |
MS.gene25932 | MS.gene86930 | PPI |
MS.gene25932 | MS.gene058853 | PPI |
MS.gene25932 | MS.gene32869 | PPI |
MS.gene25932 | MS.gene010624 | PPI |
MS.gene25932 | MS.gene27812 | PPI |
MS.gene25932 | MS.gene62686 | PPI |
MS.gene25932 | MS.gene98973 | PPI |
MS.gene37474 | MS.gene25932 | PPI |
MS.gene25932 | MS.gene25800 | PPI |
MS.gene25932 | MS.gene91317 | PPI |
MS.gene25932 | MS.gene64768 | PPI |
MS.gene25932 | MS.gene052674 | PPI |
MS.gene25932 | MS.gene53408 | PPI |
MS.gene25932 | MS.gene83067 | PPI |
MS.gene25932 | MS.gene70718 | PPI |
MS.gene25932 | MS.gene026529 | PPI |
MS.gene25932 | MS.gene96701 | PPI |
MS.gene25932 | MS.gene052675 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25932.t1 | MTR_3g078270 | 99.624 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1068 |
MS.gene25932.t1 | MTR_4g106750 | 90.038 | 532 | 53 | 0 | 1 | 532 | 1 | 532 | 0.0 | 985 |
MS.gene25932.t1 | MTR_4g106750 | 90.476 | 483 | 46 | 0 | 50 | 532 | 1 | 483 | 0.0 | 892 |
MS.gene25932.t1 | MTR_8g063220 | 81.051 | 533 | 100 | 1 | 1 | 532 | 1 | 533 | 0.0 | 891 |
MS.gene25932.t1 | MTR_5g035180 | 76.236 | 526 | 124 | 1 | 8 | 532 | 13 | 538 | 0.0 | 837 |
MS.gene25932.t1 | MTR_4g106750 | 89.730 | 370 | 38 | 0 | 163 | 532 | 11 | 380 | 0.0 | 685 |
MS.gene25932.t1 | MTR_3g103230 | 60.190 | 525 | 205 | 2 | 9 | 532 | 33 | 554 | 0.0 | 676 |
MS.gene25932.t1 | MTR_1g106085 | 59.280 | 528 | 212 | 2 | 4 | 531 | 2 | 526 | 0.0 | 641 |
MS.gene25932.t1 | MTR_5g022110 | 58.846 | 520 | 211 | 1 | 13 | 532 | 31 | 547 | 0.0 | 636 |
MS.gene25932.t1 | MTR_8g086520 | 59.653 | 518 | 207 | 1 | 13 | 530 | 7 | 522 | 0.0 | 633 |
MS.gene25932.t1 | MTR_2g016460 | 58.238 | 522 | 216 | 1 | 9 | 530 | 3 | 522 | 0.0 | 625 |
MS.gene25932.t1 | MTR_3g080390 | 59.417 | 515 | 206 | 2 | 17 | 530 | 6 | 518 | 0.0 | 612 |
MS.gene25932.t1 | MTR_8g086520 | 59.513 | 452 | 183 | 0 | 9 | 460 | 3 | 454 | 0.0 | 544 |
MS.gene25932.t1 | MTR_1g021120 | 52.632 | 513 | 241 | 1 | 19 | 531 | 36 | 546 | 0.0 | 536 |
MS.gene25932.t1 | MTR_8g086520 | 60.644 | 404 | 157 | 1 | 127 | 530 | 5 | 406 | 3.30e-177 | 505 |
MS.gene25932.t1 | MTR_8g086520 | 60.150 | 399 | 159 | 0 | 9 | 407 | 3 | 401 | 9.80e-169 | 483 |
MS.gene25932.t1 | MTR_8g068550 | 34.775 | 555 | 317 | 7 | 10 | 529 | 211 | 755 | 8.95e-108 | 339 |
MS.gene25932.t1 | MTR_5g032020 | 36.486 | 518 | 291 | 4 | 40 | 525 | 182 | 693 | 8.91e-104 | 327 |
MS.gene25932.t1 | MTR_2g084895 | 34.990 | 523 | 296 | 6 | 43 | 529 | 164 | 678 | 3.69e-94 | 301 |
MS.gene25932.t1 | MTR_4g055290 | 34.667 | 525 | 290 | 8 | 43 | 529 | 171 | 680 | 7.11e-90 | 290 |
MS.gene25932.t1 | MTR_2g103510 | 32.115 | 520 | 315 | 6 | 26 | 529 | 94 | 591 | 4.23e-86 | 278 |
MS.gene25932.t1 | MTR_8g086535 | 65.000 | 100 | 35 | 0 | 308 | 407 | 18 | 117 | 6.02e-36 | 130 |
MS.gene25932.t1 | MTR_1g079900 | 40.945 | 127 | 52 | 5 | 420 | 530 | 59 | 178 | 2.45e-20 | 89.7 |
MS.gene25932.t1 | MTR_3g087320 | 55.224 | 67 | 16 | 1 | 461 | 527 | 72 | 124 | 2.66e-17 | 78.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25932.t1 | AT5G62890 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
MS.gene25932.t1 | AT5G62890 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
MS.gene25932.t1 | AT5G62890 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
MS.gene25932.t1 | AT5G49990 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
MS.gene25932.t1 | AT5G49990 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
MS.gene25932.t1 | AT5G49990 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
MS.gene25932.t1 | AT5G49990 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
MS.gene25932.t1 | AT1G60030 | 76.952 | 525 | 121 | 0 | 8 | 532 | 14 | 538 | 0.0 | 851 |
MS.gene25932.t1 | AT5G62890 | 85.652 | 460 | 66 | 0 | 1 | 460 | 1 | 460 | 0.0 | 810 |
MS.gene25932.t1 | AT1G10540 | 68.587 | 538 | 162 | 3 | 1 | 531 | 1 | 538 | 0.0 | 777 |
MS.gene25932.t1 | AT1G49960 | 61.111 | 522 | 203 | 0 | 10 | 531 | 4 | 525 | 0.0 | 649 |
MS.gene25932.t1 | AT2G34190 | 58.880 | 518 | 211 | 1 | 13 | 530 | 7 | 522 | 0.0 | 633 |
MS.gene25932.t1 | AT1G65550 | 55.198 | 529 | 228 | 2 | 10 | 531 | 14 | 540 | 0.0 | 616 |
MS.gene25932.t1 | AT2G05760 | 57.282 | 515 | 217 | 2 | 17 | 530 | 6 | 518 | 0.0 | 605 |
MS.gene25932.t1 | AT1G10540 | 68.041 | 388 | 117 | 3 | 1 | 381 | 1 | 388 | 0.0 | 543 |
MS.gene25932.t1 | AT2G26510 | 51.257 | 517 | 245 | 3 | 18 | 531 | 36 | 548 | 1.68e-180 | 519 |
MS.gene25932.t1 | AT5G25420 | 49.436 | 443 | 154 | 5 | 10 | 452 | 26 | 398 | 1.33e-143 | 420 |
MS.gene25932.t1 | AT2G26510 | 52.861 | 367 | 167 | 2 | 18 | 381 | 36 | 399 | 1.92e-126 | 376 |
MS.gene25932.t1 | AT2G26510 | 52.260 | 354 | 163 | 2 | 18 | 368 | 36 | 386 | 6.07e-120 | 360 |
MS.gene25932.t1 | AT2G27810 | 35.509 | 521 | 297 | 5 | 43 | 529 | 186 | 701 | 6.90e-93 | 298 |
MS.gene25932.t1 | AT4G38050 | 35.249 | 522 | 300 | 5 | 40 | 529 | 189 | 704 | 2.27e-92 | 297 |
MS.gene25932.t1 | AT2G27810 | 34.312 | 545 | 295 | 7 | 43 | 529 | 186 | 725 | 3.33e-88 | 287 |
MS.gene25932.t1 | AT2G27810 | 39.012 | 405 | 228 | 3 | 43 | 429 | 186 | 589 | 1.01e-78 | 258 |
MS.gene25932.t1 | AT2G27810 | 39.106 | 358 | 199 | 3 | 43 | 382 | 186 | 542 | 5.02e-68 | 229 |
Find 140 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATCACTGTGTAGGAAAATT+TGG | 0.153225 | 3.2:+69183094 | MS.gene25932:intron |
TTGGTTTCTCTTGTTGGTTT+TGG | 0.211154 | 3.2:+69180680 | MS.gene25932:CDS |
GGGGTTGGCATTCTTCTATC+TGG | 0.251901 | 3.2:+69182751 | MS.gene25932:CDS |
CAGAGAAAATGCTGGTCTTT+TGG | 0.254875 | 3.2:+69182906 | MS.gene25932:intron |
GTTCCATTGGTTTCTCTTGT+TGG | 0.266604 | 3.2:+69180674 | MS.gene25932:CDS |
ATTAGGCTTCTCTATATTCT+TGG | 0.267261 | 3.2:+69183352 | MS.gene25932:CDS |
ACATTGGTGCAAACACTCTT+TGG | 0.307293 | 3.2:+69179583 | MS.gene25932:CDS |
ATTCTTCTATCTGGATTGTT+TGG | 0.309588 | 3.2:+69182760 | MS.gene25932:CDS |
TCACGATTACCTGCAGTAAT+TGG | 0.310968 | 3.2:+69179607 | MS.gene25932:CDS |
GCAGCTGAGGCCATACTTCT+TGG | 0.316014 | 3.2:+69179338 | MS.gene25932:intron |
TTTAGAACAAAGTTCATATT+AGG | 0.323198 | 3.2:+69183335 | MS.gene25932:CDS |
GAGCTTTCATTGCTGTATAT+AGG | 0.350680 | 3.2:+69182513 | MS.gene25932:CDS |
TGCCTATTCTTTGCTTATGT+TGG | 0.351940 | 3.2:+69183163 | MS.gene25932:CDS |
TTAGGCTTCTCTATATTCTT+GGG | 0.353632 | 3.2:+69183353 | MS.gene25932:CDS |
GCCACCTTCTATTCTTAGTC+GGG | 0.361786 | 3.2:+69182556 | MS.gene25932:CDS |
TACTAGGCTTTAGTGGCCTT+TGG | 0.362108 | 3.2:+69180383 | MS.gene25932:CDS |
TATACAGCAATCAATGGTTA+TGG | 0.366024 | 3.2:+69183404 | MS.gene25932:CDS |
CAAATAGTACTAGGCTTTAG+TGG | 0.377969 | 3.2:+69180376 | MS.gene25932:CDS |
CAATCAAAAGCATTTGTTGC+GGG | 0.379620 | 3.2:+69183688 | MS.gene25932:CDS |
GCTCCCCATTGAAAGGGATA+TGG | 0.382055 | 3.2:-69181774 | None:intergenic |
CACTGCTCTTGTTCCTCAGA+TGG | 0.382385 | 3.2:+69179406 | MS.gene25932:CDS |
AAGCAGAGTTTCAATTACTT+TGG | 0.386238 | 3.2:-69179542 | None:intergenic |
TAGACAACACTTTACATAAG+AGG | 0.388088 | 3.2:+69183728 | MS.gene25932:CDS |
GTAATGCAGTAAGAAATATT+TGG | 0.393915 | 3.2:-69178355 | None:intergenic |
GAAGATAATGAGGGCAGTCC+AGG | 0.395646 | 3.2:+69180327 | MS.gene25932:CDS |
ATATTTGGTAGTTGATCCTT+TGG | 0.395677 | 3.2:-69178340 | None:intergenic |
TCTATTCTTAGTCGGGGTAT+TGG | 0.399112 | 3.2:+69182563 | MS.gene25932:CDS |
TTTCGGTGGAGAACCGTTAT+AGG | 0.402300 | 3.2:-69181128 | None:intergenic |
ACTTTGTTCTAAAACTGTTA+AGG | 0.406816 | 3.2:-69183325 | None:intergenic |
ACTGCCAGAGCTTATATTGC+TGG | 0.410871 | 3.2:+69180837 | MS.gene25932:CDS |
ATGTTGAAATCCAAGAAGTA+TGG | 0.411526 | 3.2:-69179348 | None:intergenic |
TCCTTTGGTGGATGTGGTTG+TGG | 0.413545 | 3.2:-69178325 | None:intergenic |
TACAATGCAGCAATGATTGC+AGG | 0.417508 | 3.2:-69183139 | None:intergenic |
GACTTATAGATGCTGCTCCT+TGG | 0.435416 | 3.2:+69181182 | MS.gene25932:CDS |
TGCCACCTTCTATTCTTAGT+CGG | 0.437110 | 3.2:+69182555 | MS.gene25932:CDS |
GTGCCACATGTGTTGCATTC+GGG | 0.438570 | 3.2:+69181022 | MS.gene25932:CDS |
GAGTTCCATATCCCTTTCAA+TGG | 0.440675 | 3.2:+69181769 | MS.gene25932:CDS |
TCCACTTTCAGCTGTTCCAT+TGG | 0.444367 | 3.2:+69180661 | MS.gene25932:CDS |
AAATATTTGTTTAGATTGAA+AGG | 0.450377 | 3.2:-69183844 | None:intergenic |
TAGTCGGGGTATTGGTTGGC+AGG | 0.453343 | 3.2:+69182571 | MS.gene25932:CDS |
GCTGTTCTACTCACTGTTGG+AGG | 0.454047 | 3.2:+69181103 | MS.gene25932:CDS |
GTTGCTAAATGTGTAGAGAT+TGG | 0.455062 | 3.2:+69180814 | MS.gene25932:CDS |
TCTTCTGATAAGACCTCAAT+CGG | 0.455463 | 3.2:-69179700 | None:intergenic |
CATCTTCCACCTGTGTGGAC+TGG | 0.457011 | 3.2:-69183428 | None:intergenic |
TCAACTCTTCAAATAGTACT+AGG | 0.457439 | 3.2:+69180367 | MS.gene25932:CDS |
AGTTGATCCTTTGGTGGATG+TGG | 0.457879 | 3.2:-69178331 | None:intergenic |
TTGCTGCTTGTAGGCGGAGA+AGG | 0.458011 | 3.2:+69179519 | MS.gene25932:intron |
ATTGCTGGTATTTGTTTCAC+AGG | 0.458880 | 3.2:+69180852 | MS.gene25932:CDS |
CTGTTCTACTCACTGTTGGA+GGG | 0.460539 | 3.2:+69181104 | MS.gene25932:CDS |
TAAGAATAGAAGGTGGCAAT+GGG | 0.462513 | 3.2:-69182550 | None:intergenic |
GATAAGACCTCAATCGGATC+TGG | 0.463050 | 3.2:-69179694 | None:intergenic |
TACGTGACAGTTCAATGATA+TGG | 0.473040 | 3.2:+69183651 | MS.gene25932:intron |
AGAATAATTGAGATTGTCGT+TGG | 0.473319 | 3.2:-69179649 | None:intergenic |
TGAGATTGTCGTTGGAACAT+AGG | 0.474228 | 3.2:-69179641 | None:intergenic |
GAAGCTATGGCAGGAGGAGG+AGG | 0.475226 | 3.2:+69178280 | None:intergenic |
AGAGTTGTGCAGATATCTGC+TGG | 0.488720 | 3.2:+69182952 | MS.gene25932:CDS |
ATACCCCGACTAAGAATAGA+AGG | 0.488782 | 3.2:-69182560 | None:intergenic |
TACCAACATAAGCAAAGAAT+AGG | 0.490475 | 3.2:-69183165 | None:intergenic |
TTCTTAGTCGGGGTATTGGT+TGG | 0.491475 | 3.2:+69182567 | MS.gene25932:CDS |
CAGTCCACACAGGTGGAAGA+TGG | 0.492027 | 3.2:+69183429 | MS.gene25932:CDS |
AGTTCCATATCCCTTTCAAT+GGG | 0.492360 | 3.2:+69181770 | MS.gene25932:CDS |
GATCTGGTTCATTACTGAAT+CGG | 0.493059 | 3.2:-69179678 | None:intergenic |
GGATTGTTTGGAACAATTAG+CGG | 0.502285 | 3.2:+69182772 | MS.gene25932:CDS |
AATGATTGCAGGTGGGATAG+AGG | 0.502422 | 3.2:-69183128 | None:intergenic |
TGTGCCACATGTGTTGCATT+CGG | 0.505553 | 3.2:+69181021 | MS.gene25932:CDS |
AGAAATTCAAGAAGATAATG+AGG | 0.505728 | 3.2:+69180317 | MS.gene25932:intron |
TATGCTGTTCTACTCACTGT+TGG | 0.507624 | 3.2:+69181100 | MS.gene25932:CDS |
GGACAAGTACAAGTCATTCA+AGG | 0.513945 | 3.2:+69183789 | MS.gene25932:CDS |
TCCTGCCGCACTGATCGTGC+TGG | 0.513982 | 3.2:+69181160 | MS.gene25932:CDS |
ACTGCTCTTGTTCCTCAGAT+GGG | 0.514976 | 3.2:+69179407 | MS.gene25932:CDS |
ATACAGCAATCAATGGTTAT+GGG | 0.516393 | 3.2:+69183405 | MS.gene25932:CDS |
GAGGGATTCATCTATTAGAA+AGG | 0.518790 | 3.2:+69183747 | MS.gene25932:CDS |
TCCAGCACGATCAGTGCGGC+AGG | 0.522111 | 3.2:-69181161 | None:intergenic |
CTTGTTCCTCAGATGGGAGG+TGG | 0.523430 | 3.2:+69179413 | MS.gene25932:CDS |
ATCTTTCGTTGCTCTTGTAG+AGG | 0.524901 | 3.2:+69181839 | MS.gene25932:CDS |
TATTCACAATTGCAATTGTG+TGG | 0.525941 | 3.2:+69181074 | MS.gene25932:CDS |
TCTTATGTAAAGTGTTGTCT+AGG | 0.530549 | 3.2:-69183726 | None:intergenic |
TTTCCCTGCAGAGAAAATGC+TGG | 0.530895 | 3.2:+69182898 | MS.gene25932:intron |
ACCAATGGAACAGCTGAAAG+TGG | 0.532981 | 3.2:-69180662 | None:intergenic |
AGACAACACTTTACATAAGA+GGG | 0.533794 | 3.2:+69183729 | MS.gene25932:CDS |
ACTGTTGGAGGGGCCTATAA+CGG | 0.535674 | 3.2:+69181115 | MS.gene25932:CDS |
TTAGATTAAGAAGCTATGGC+AGG | 0.535979 | 3.2:+69178271 | None:intergenic |
ATCTGAGGAACAAGAGCAGT+GGG | 0.536762 | 3.2:-69179404 | None:intergenic |
AATACCAGCAATATAAGCTC+TGG | 0.537388 | 3.2:-69180841 | None:intergenic |
AATGAGTATACAGCAATCAA+TGG | 0.538381 | 3.2:+69183398 | MS.gene25932:CDS |
CGAAGCGTTTGCCATGATGA+TGG | 0.538919 | 3.2:+69181815 | MS.gene25932:CDS |
TGTAGGTGCTCCCCATTGAA+AGG | 0.539040 | 3.2:-69181781 | None:intergenic |
AGCATTTGTTGCGGGTGTTG+TGG | 0.545109 | 3.2:+69183696 | MS.gene25932:CDS |
CGATTACCTGCAGTAATTGG+AGG | 0.545684 | 3.2:+69179610 | MS.gene25932:CDS |
TTTGGTAGTTGATCCTTTGG+TGG | 0.549747 | 3.2:-69178337 | None:intergenic |
CCAATCAAAAGCATTTGTTG+CGG | 0.549945 | 3.2:+69183687 | MS.gene25932:CDS |
TAAGACCCTCCAATTACTGC+AGG | 0.557300 | 3.2:-69179616 | None:intergenic |
AGAAACTAACGCCATGGAGG+AGG | 0.558083 | 3.2:-69178382 | None:intergenic |
GCTTCGCCTGCATCAAATGT+AGG | 0.559087 | 3.2:-69181798 | None:intergenic |
GCCTTTGGCGTAATGTTGCA+AGG | 0.561053 | 3.2:+69180398 | MS.gene25932:CDS |
AGTCCACACAGGTGGAAGAT+GGG | 0.561280 | 3.2:+69183430 | MS.gene25932:CDS |
TGTTCTACTCACTGTTGGAG+GGG | 0.564508 | 3.2:+69181105 | MS.gene25932:CDS |
CTAAGAATAGAAGGTGGCAA+TGG | 0.564521 | 3.2:-69182551 | None:intergenic |
GTAGGTGCTCCCCATTGAAA+GGG | 0.565086 | 3.2:-69181780 | None:intergenic |
TCATCATTTGCAGGAGCTGG+AGG | 0.565976 | 3.2:+69183278 | MS.gene25932:intron |
AACGAAAGATGCCATCATCA+TGG | 0.570031 | 3.2:-69181826 | None:intergenic |
ACAATCTCAATTATTCTCGC+TGG | 0.570834 | 3.2:+69179655 | MS.gene25932:CDS |
GGACAGAGGCAAACATTGGT+GGG | 0.574941 | 3.2:+69183768 | MS.gene25932:CDS |
TAAGAAGCTATGGCAGGAGG+AGG | 0.579489 | 3.2:+69178277 | None:intergenic |
TGTTGCTGGTATTAACACAT+TGG | 0.581871 | 3.2:+69179567 | MS.gene25932:CDS |
GATTAAGAAGCTATGGCAGG+AGG | 0.583299 | 3.2:+69178274 | None:intergenic |
AGGACAGAGGCAAACATTGG+TGG | 0.588315 | 3.2:+69183767 | MS.gene25932:CDS |
GGAGCACCTACATTTGATGC+AGG | 0.588577 | 3.2:+69181792 | MS.gene25932:CDS |
CGCACAATTAATTAAACCGA+TGG | 0.592039 | 3.2:-69183868 | None:intergenic |
GCATTACTAGTCCTCCTCCA+TGG | 0.599317 | 3.2:+69178371 | MS.gene25932:CDS |
GAAAGGACAGAGGCAAACAT+TGG | 0.599729 | 3.2:+69183764 | MS.gene25932:CDS |
AAACCAACAAGAGAAACCAA+TGG | 0.606011 | 3.2:-69180677 | None:intergenic |
TAATGAACCAGATCCGATTG+AGG | 0.607552 | 3.2:+69179687 | MS.gene25932:CDS |
ACATTTCCACCTCCCATCTG+AGG | 0.609636 | 3.2:-69179419 | None:intergenic |
AAGATAATGAGGGCAGTCCA+GGG | 0.610018 | 3.2:+69180328 | MS.gene25932:CDS |
GCTCTTGTTCCTCAGATGGG+AGG | 0.615420 | 3.2:+69179410 | MS.gene25932:CDS |
GAAATTCAAGAAGATAATGA+GGG | 0.618663 | 3.2:+69180318 | MS.gene25932:intron |
AATGCAGCAATGATTGCAGG+TGG | 0.623862 | 3.2:-69183136 | None:intergenic |
CCACCTTCTATTCTTAGTCG+GGG | 0.624455 | 3.2:+69182557 | MS.gene25932:CDS |
ACCTTGCAACATTACGCCAA+AGG | 0.624889 | 3.2:-69180399 | None:intergenic |
GATTACCTGCAGTAATTGGA+GGG | 0.629859 | 3.2:+69179611 | MS.gene25932:CDS |
TTTCCCGAATGCAACACATG+TGG | 0.633762 | 3.2:-69181025 | None:intergenic |
ATACCCATCTTCCACCTGTG+TGG | 0.636689 | 3.2:-69183433 | None:intergenic |
TATGGGCCAGTCCACACAGG+TGG | 0.641196 | 3.2:+69183422 | MS.gene25932:CDS |
CATCTGAGGAACAAGAGCAG+TGG | 0.642369 | 3.2:-69179405 | None:intergenic |
GACAAGTACAAGTCATTCAA+GGG | 0.644339 | 3.2:+69183790 | MS.gene25932:CDS |
ACCACAACCACATCCACCAA+AGG | 0.644503 | 3.2:+69178324 | MS.gene25932:CDS |
TACAGCAATGAAAGCTCCAG+TGG | 0.645288 | 3.2:-69182507 | None:intergenic |
GGTTATGGGCCAGTCCACAC+AGG | 0.660679 | 3.2:+69183419 | MS.gene25932:CDS |
CAAGGGTGACACAAGAAGTG+AGG | 0.668674 | 3.2:+69183807 | MS.gene25932:CDS |
GTTTCAGTCTTACACAGACA+CGG | 0.669427 | 3.2:-69182800 | None:intergenic |
ATGCAGCAATGATTGCAGGT+GGG | 0.675249 | 3.2:-69183135 | None:intergenic |
AAAAGAAACTAACGCCATGG+AGG | 0.701039 | 3.2:-69178385 | None:intergenic |
AAGCAACAATAAGAGCACCC+TGG | 0.705283 | 3.2:-69180345 | None:intergenic |
AAGAATAGAAGGTGGCAATG+GGG | 0.708313 | 3.2:-69182549 | None:intergenic |
GTATACTCATTGAAGTACTG+TGG | 0.710895 | 3.2:-69183386 | None:intergenic |
TCATCTATTAGAAAGGACAG+AGG | 0.717827 | 3.2:+69183754 | MS.gene25932:CDS |
GTTCCATATCCCTTTCAATG+GGG | 0.722732 | 3.2:+69181771 | MS.gene25932:CDS |
CCCCGACTAAGAATAGAAGG+TGG | 0.728889 | 3.2:-69182557 | None:intergenic |
TAAGTCCAGCACGATCAGTG+CGG | 0.740720 | 3.2:-69181165 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAAGCAAAAAAAAAAA+AGG | - | chr3.2:69180286-69180305 | None:intergenic | 10.0% |
!! | GTTGATTAAAATAAAATAAA+GGG | + | chr3.2:69178468-69178487 | MS.gene25932:intron | 10.0% |
!! | AAATATTTGTTTAGATTGAA+AGG | - | chr3.2:69183847-69183866 | None:intergenic | 15.0% |
!! | ATAAATGATAATCGTAATAA+TGG | + | chr3.2:69182620-69182639 | MS.gene25932:intron | 15.0% |
!! | ATATATATAATAGTACTGTA+AGG | + | chr3.2:69182264-69182283 | MS.gene25932:intron | 15.0% |
!! | CAATTTCATTTATATAAACA+AGG | - | chr3.2:69182868-69182887 | None:intergenic | 15.0% |
!! | CTTGTTTATATAAATGAAAT+TGG | + | chr3.2:69182866-69182885 | MS.gene25932:intron | 15.0% |
!! | GGTTGATTAAAATAAAATAA+AGG | + | chr3.2:69178467-69178486 | MS.gene25932:intron | 15.0% |
!! | TTAAAAAAGAGAATATCATA+AGG | - | chr3.2:69181874-69181893 | None:intergenic | 15.0% |
!! | TTTAACTATATAACTTGAAA+AGG | - | chr3.2:69182356-69182375 | None:intergenic | 15.0% |
!!! | AATGAATAAATTTAAAGCTT+TGG | + | chr3.2:69181368-69181387 | MS.gene25932:intron | 15.0% |
!!! | AATTAATTTGATGAGAAATT+TGG | + | chr3.2:69179303-69179322 | MS.gene25932:intron | 15.0% |
!!! | ATTAATTTGATGAGAAATTT+GGG | + | chr3.2:69179304-69179323 | MS.gene25932:intron | 15.0% |
!!! | GATTGATTATTTTTATAAGA+GGG | - | chr3.2:69182092-69182111 | None:intergenic | 15.0% |
!!! | TCTTTGTTCTTTTAATATTA+TGG | + | chr3.2:69180952-69180971 | MS.gene25932:intron | 15.0% |
!!! | TGATATTCTCTTTTTTAAAT+TGG | + | chr3.2:69181876-69181895 | MS.gene25932:intron | 15.0% |
!!! | TGATTGATTATTTTTATAAG+AGG | - | chr3.2:69182093-69182112 | None:intergenic | 15.0% |
!!! | TTAATTAAGCATTGATATTA+AGG | + | chr3.2:69178634-69178653 | MS.gene25932:intron | 15.0% |
!!! | TTTACTGAATACAATTTTTT+TGG | - | chr3.2:69180562-69180581 | None:intergenic | 15.0% |
!! | AAATTCCTTATTCAAATCTT+TGG | + | chr3.2:69180580-69180599 | MS.gene25932:intron | 20.0% |
!! | GATTTGAAAAAAGAGAAAAT+TGG | - | chr3.2:69181440-69181459 | None:intergenic | 20.0% |
!! | GTATAAGAACATTATTTGTT+TGG | + | chr3.2:69178490-69178509 | MS.gene25932:intron | 20.0% |
!! | TATTTCTTACTTTATGTCAT+TGG | + | chr3.2:69178542-69178561 | MS.gene25932:intron | 20.0% |
!! | TTGTGAATAAAACAGAAAAA+CGG | - | chr3.2:69181063-69181082 | None:intergenic | 20.0% |
!!! | AAAAAACTTTTGGTAATTGT+TGG | + | chr3.2:69182179-69182198 | MS.gene25932:intron | 20.0% |
!!! | AAAAACTTTTGGTAATTGTT+GGG | + | chr3.2:69182180-69182199 | MS.gene25932:intron | 20.0% |
!!! | AAATATATTTTTTGCAGAGT+CGG | + | chr3.2:69183468-69183487 | MS.gene25932:intron | 20.0% |
!!! | AAATTGTAGTTTTCAAAGTT+AGG | + | chr3.2:69180132-69180151 | MS.gene25932:intron | 20.0% |
!!! | AAATTGTAGTTTTCATACTT+AGG | - | chr3.2:69179938-69179957 | None:intergenic | 20.0% |
!!! | AACTTTGAAAACTACAATTT+TGG | - | chr3.2:69180132-69180151 | None:intergenic | 20.0% |
!!! | AAGTATGAAAACTACAATTT+TGG | + | chr3.2:69179938-69179957 | MS.gene25932:intron | 20.0% |
!!! | AATTGTAGTTTTCAAAGTTA+GGG | + | chr3.2:69180133-69180152 | MS.gene25932:intron | 20.0% |
!!! | AATTGTAGTTTTCATACTTA+GGG | - | chr3.2:69179937-69179956 | None:intergenic | 20.0% |
!!! | AATTTTTTTGGTGAATATCA+TGG | - | chr3.2:69180550-69180569 | None:intergenic | 20.0% |
!!! | AATTTTTTTTTGCCCTTATT+GGG | + | chr3.2:69181513-69181532 | MS.gene25932:intron | 20.0% |
!!! | AGTTTTAAAAATTACTGGTA+AGG | + | chr3.2:69182138-69182157 | MS.gene25932:intron | 20.0% |
!!! | ATGATTTTCTTTTCAATTCT+CGG | + | chr3.2:69182979-69182998 | MS.gene25932:CDS | 20.0% |
!!! | ATGTTTGATTTCATTTTTAG+AGG | - | chr3.2:69178993-69179012 | None:intergenic | 20.0% |
!!! | ATTCAGGTTGTTTTATTTTT+GGG | + | chr3.2:69179073-69179092 | MS.gene25932:intron | 20.0% |
!!! | GAAAGTTTTACTTGATTTAT+AGG | - | chr3.2:69182687-69182706 | None:intergenic | 20.0% |
!!! | GAATGAGTTTTAAAAATTAC+TGG | + | chr3.2:69182133-69182152 | MS.gene25932:intron | 20.0% |
!!! | TATTCAGGTTGTTTTATTTT+TGG | + | chr3.2:69179072-69179091 | MS.gene25932:intron | 20.0% |
!!! | TCTAAACAAATATTTTCCAT+CGG | + | chr3.2:69183852-69183871 | MS.gene25932:CDS | 20.0% |
!!! | TGCAAAAAGAATCTAAAATT+AGG | - | chr3.2:69178569-69178588 | None:intergenic | 20.0% |
!!! | TGTTTGATTTCATTTTTAGA+GGG | - | chr3.2:69178992-69179011 | None:intergenic | 20.0% |
!!! | TTAATTTGATGAGAAATTTG+GGG | + | chr3.2:69179305-69179324 | MS.gene25932:intron | 20.0% |
!!! | TTTAATCCTGAAAAAACTTT+TGG | + | chr3.2:69182169-69182188 | MS.gene25932:intron | 20.0% |
!!! | TTTAGAACAAAGTTCATATT+AGG | + | chr3.2:69183335-69183354 | MS.gene25932:CDS | 20.0% |
! | AAATCAAACTTACATCAGAT+TGG | - | chr3.2:69180620-69180639 | None:intergenic | 25.0% |
! | AAATGTTGGCAATTAGTAAA+AGG | - | chr3.2:69183073-69183092 | None:intergenic | 25.0% |
! | AATGTTGGCAATTAGTAAAA+GGG | - | chr3.2:69183072-69183091 | None:intergenic | 25.0% |
! | ACACAAACTACAAATAATCA+AGG | - | chr3.2:69179206-69179225 | None:intergenic | 25.0% |
! | AGAAATTCAAGAAGATAATG+AGG | + | chr3.2:69180317-69180336 | MS.gene25932:intron | 25.0% |
! | AGAACATTATTTGTTTGGTT+TGG | + | chr3.2:69178495-69178514 | MS.gene25932:intron | 25.0% |
! | ATCAAATAGCTACAAACTTA+AGG | - | chr3.2:69180234-69180253 | None:intergenic | 25.0% |
! | ATGTTTGAACAATGTTGTAA+AGG | + | chr3.2:69179136-69179155 | MS.gene25932:intron | 25.0% |
! | ATTGGTGAATGAATATAAGT+TGG | - | chr3.2:69181422-69181441 | None:intergenic | 25.0% |
! | CTAATCCAAAGATTTGAATA+AGG | - | chr3.2:69180588-69180607 | None:intergenic | 25.0% |
! | CTAGATCTAGAAAAAAAACT+GGG | - | chr3.2:69178665-69178684 | None:intergenic | 25.0% |
! | CTTACATCATAAGACTAATT+TGG | - | chr3.2:69178713-69178732 | None:intergenic | 25.0% |
! | GAAATTCAAGAAGATAATGA+GGG | + | chr3.2:69180318-69180337 | MS.gene25932:intron | 25.0% |
! | GAATATTTGGCCAATTTAAA+TGG | + | chr3.2:69179174-69179193 | MS.gene25932:intron | 25.0% |
! | GTAATGCAGTAAGAAATATT+TGG | - | chr3.2:69178358-69178377 | None:intergenic | 25.0% |
! | GTATCTCATTATTCTTAATC+TGG | + | chr3.2:69178446-69178465 | MS.gene25932:intron | 25.0% |
! | TAAAACTAAAAGAGTCTACA+CGG | - | chr3.2:69181262-69181281 | None:intergenic | 25.0% |
! | TAACTATACTAAATGATGTG+TGG | + | chr3.2:69179725-69179744 | MS.gene25932:intron | 25.0% |
! | TAAGTTTGTAGCTATTTGAT+TGG | + | chr3.2:69180234-69180253 | MS.gene25932:intron | 25.0% |
! | TACAAATTTGCACAAATAGT+CGG | - | chr3.2:69180482-69180501 | None:intergenic | 25.0% |
! | TAGAAACATTAAAAGACACT+AGG | - | chr3.2:69180902-69180921 | None:intergenic | 25.0% |
! | TATATTCTATTCAATTGCCA+GGG | + | chr3.2:69182308-69182327 | MS.gene25932:intron | 25.0% |
! | TATCTTCTTGAATTTCTGAA+TGG | - | chr3.2:69180314-69180333 | None:intergenic | 25.0% |
! | TCATTAAATTTAACCCTTGA+TGG | + | chr3.2:69181219-69181238 | MS.gene25932:intron | 25.0% |
! | TCTAGATCTAGAAAAAAAAC+TGG | - | chr3.2:69178666-69178685 | None:intergenic | 25.0% |
! | TGCAAATGATGAATGAAAAT+GGG | - | chr3.2:69183270-69183289 | None:intergenic | 25.0% |
! | TTATATTCTATTCAATTGCC+AGG | + | chr3.2:69182307-69182326 | MS.gene25932:intron | 25.0% |
! | TTCTCAAGAAAGATTCAATT+GGG | + | chr3.2:69181639-69181658 | MS.gene25932:intron | 25.0% |
! | TTGACATGAAATAACAAGAA+TGG | - | chr3.2:69181462-69181481 | None:intergenic | 25.0% |
! | TTGGAGACACAATAAAAAAA+TGG | - | chr3.2:69179825-69179844 | None:intergenic | 25.0% |
! | TTTCTCAAGAAAGATTCAAT+TGG | + | chr3.2:69181638-69181657 | MS.gene25932:intron | 25.0% |
!! | AAAATTGATTCTCACATGTT+TGG | - | chr3.2:69178946-69178965 | None:intergenic | 25.0% |
!! | AAGGAATATGCCATTTAAAT+TGG | - | chr3.2:69179187-69179206 | None:intergenic | 25.0% |
!! | ATTGTAGTTTTCAAAGTTAG+GGG | + | chr3.2:69180134-69180153 | MS.gene25932:intron | 25.0% |
!! | ATTGTAGTTTTCATACTTAG+GGG | - | chr3.2:69179936-69179955 | None:intergenic | 25.0% |
!! | GTAAATCATAGTCTCTATTT+TGG | - | chr3.2:69179788-69179807 | None:intergenic | 25.0% |
!! | GTTTCAAGTAGAATCATATT+TGG | + | chr3.2:69178892-69178911 | MS.gene25932:intron | 25.0% |
!! | TCTTCAATCTTTTCTAATAC+TGG | + | chr3.2:69181578-69181597 | MS.gene25932:intron | 25.0% |
!! | TTATTGTGGCATTTAAAGTT+AGG | - | chr3.2:69180209-69180228 | None:intergenic | 25.0% |
!! | TTTTCAAAATGTTGCGATTA+TGG | + | chr3.2:69180033-69180052 | MS.gene25932:intron | 25.0% |
!! | TTTTGCGTAATTGGAATATT+TGG | + | chr3.2:69179161-69179180 | MS.gene25932:intron | 25.0% |
!!! | ACTTTGTTCTAAAACTGTTA+AGG | - | chr3.2:69183328-69183347 | None:intergenic | 25.0% |
!!! | AGTTTGATTTTTTTTTCTGC+AGG | + | chr3.2:69180630-69180649 | MS.gene25932:intron | 25.0% |
!!! | ATTACATGCTGCTTATTTTA+AGG | - | chr3.2:69183244-69183263 | None:intergenic | 25.0% |
!!! | ATTTTTTTTTGCCCTTATTG+GGG | + | chr3.2:69181514-69181533 | MS.gene25932:intron | 25.0% |
!!! | CAACATTTTGAAAAGATAAG+GGG | - | chr3.2:69180027-69180046 | None:intergenic | 25.0% |
!!! | CAATTACCAAAAGTTTTTTC+AGG | - | chr3.2:69182178-69182197 | None:intergenic | 25.0% |
!!! | GAATTTTTTTTTGCCCTTAT+TGG | + | chr3.2:69181512-69181531 | MS.gene25932:intron | 25.0% |
!!! | GCAACATTTTGAAAAGATAA+GGG | - | chr3.2:69180028-69180047 | None:intergenic | 25.0% |
!!! | TATTCTGTCTTTGTTTTTTC+CGG | + | chr3.2:69181962-69181981 | MS.gene25932:intron | 25.0% |
!!! | TCTTTTTTTCTCTTAGATTC+TGG | + | chr3.2:69178402-69178421 | MS.gene25932:intron | 25.0% |
!!! | TTCAGGTTGTTTTATTTTTG+GGG | + | chr3.2:69179074-69179093 | MS.gene25932:intron | 25.0% |
!!! | TTTTTTTTCTAGATCTAGAC+TGG | + | chr3.2:69178667-69178686 | MS.gene25932:intron | 25.0% |
AAAAAAAGAAACTAACGCCA+TGG | - | chr3.2:69178391-69178410 | None:intergenic | 30.0% | |
AAAACTTAGCCTACACATAA+TGG | + | chr3.2:69182373-69182392 | MS.gene25932:intron | 30.0% | |
AACCAAAAGTGAGTTATGTT+TGG | + | chr3.2:69178793-69178812 | MS.gene25932:intron | 30.0% | |
AAGCAGAGTTTCAATTACTT+TGG | - | chr3.2:69179545-69179564 | None:intergenic | 30.0% | |
AATAGACAAAATGCCATCAA+GGG | - | chr3.2:69181235-69181254 | None:intergenic | 30.0% | |
AATGAGTATACAGCAATCAA+TGG | + | chr3.2:69183398-69183417 | MS.gene25932:CDS | 30.0% | |
ACATATTTCCCTTAAGTTAG+GGG | - | chr3.2:69179997-69180016 | None:intergenic | 30.0% | |
ACCAAAGTGAATCAATACTA+AGG | - | chr3.2:69179263-69179282 | None:intergenic | 30.0% | |
ACTGCATGCATAACTTTAAT+AGG | + | chr3.2:69179861-69179880 | MS.gene25932:intron | 30.0% | |
AGAATAATTGAGATTGTCGT+TGG | - | chr3.2:69179652-69179671 | None:intergenic | 30.0% | |
AGACAACACTTTACATAAGA+GGG | + | chr3.2:69183729-69183748 | MS.gene25932:CDS | 30.0% | |
AGACATATTTCCCTTAAGTT+AGG | - | chr3.2:69179999-69180018 | None:intergenic | 30.0% | |
ATACAGCAATCAATGGTTAT+GGG | + | chr3.2:69183405-69183424 | MS.gene25932:CDS | 30.0% | |
ATATTCTATTCAATTGCCAG+GGG | + | chr3.2:69182309-69182328 | MS.gene25932:intron | 30.0% | |
ATCCATGAACTAAAATCACA+AGG | - | chr3.2:69180932-69180951 | None:intergenic | 30.0% | |
ATGTTGAAATCCAAGAAGTA+TGG | - | chr3.2:69179351-69179370 | None:intergenic | 30.0% | |
ATGTTGGCAATTAGTAAAAG+GGG | - | chr3.2:69183071-69183090 | None:intergenic | 30.0% | |
ATTAGGCTTCTCTATATTCT+TGG | + | chr3.2:69183352-69183371 | MS.gene25932:CDS | 30.0% | |
ATTCTTCTATCTGGATTGTT+TGG | + | chr3.2:69182760-69182779 | MS.gene25932:CDS | 30.0% | |
CAATGCATAAGAATTGAACT+AGG | + | chr3.2:69183586-69183605 | MS.gene25932:intron | 30.0% | |
CTGCAAATGATGAATGAAAA+TGG | - | chr3.2:69183271-69183290 | None:intergenic | 30.0% | |
CTGTTACATAGTTGCTAATT+TGG | + | chr3.2:69182458-69182477 | MS.gene25932:intron | 30.0% | |
GACATATTTCCCTTAAGTTA+GGG | - | chr3.2:69179998-69180017 | None:intergenic | 30.0% | |
GATAAAAATCTCCCCAATAA+GGG | - | chr3.2:69181528-69181547 | None:intergenic | 30.0% | |
GTGAATCAATACTAAGGAAA+AGG | - | chr3.2:69179257-69179276 | None:intergenic | 30.0% | |
GTGTTATGTAACATCACTAA+GGG | + | chr3.2:69179096-69179115 | MS.gene25932:intron | 30.0% | |
TACCAACATAAGCAAAGAAT+AGG | - | chr3.2:69183168-69183187 | None:intergenic | 30.0% | |
TAGACAACACTTTACATAAG+AGG | + | chr3.2:69183728-69183747 | MS.gene25932:CDS | 30.0% | |
TAGTTTCATTGAAATTCAGC+TGG | - | chr3.2:69182068-69182087 | None:intergenic | 30.0% | |
TATACAGCAATCAATGGTTA+TGG | + | chr3.2:69183404-69183423 | MS.gene25932:CDS | 30.0% | |
TATCACTGTGTAGGAAAATT+TGG | + | chr3.2:69183094-69183113 | MS.gene25932:intron | 30.0% | |
TATTCACAATTGCAATTGTG+TGG | + | chr3.2:69181074-69181093 | MS.gene25932:CDS | 30.0% | |
TCAACTCTTCAAATAGTACT+AGG | + | chr3.2:69180367-69180386 | MS.gene25932:CDS | 30.0% | |
TCAAGAAAACCAATATCTCA+AGG | - | chr3.2:69181666-69181685 | None:intergenic | 30.0% | |
TCAAGTAGAATCATATTTGG+AGG | + | chr3.2:69178895-69178914 | MS.gene25932:intron | 30.0% | |
TGATAAAAATCTCCCCAATA+AGG | - | chr3.2:69181529-69181548 | None:intergenic | 30.0% | |
TTACATCAGATTGGAACATT+TGG | - | chr3.2:69180611-69180630 | None:intergenic | 30.0% | |
TTAGGCTTCTCTATATTCTT+GGG | + | chr3.2:69183353-69183372 | MS.gene25932:CDS | 30.0% | |
TTATGATGTAAGTGTGTGTT+TGG | + | chr3.2:69178721-69178740 | MS.gene25932:intron | 30.0% | |
TTCATGATACTAAGCTACTA+TGG | - | chr3.2:69182116-69182135 | None:intergenic | 30.0% | |
! | ATATTCTATTTGCTGCTTGT+AGG | + | chr3.2:69179510-69179529 | MS.gene25932:intron | 30.0% |
! | ATATTTGGTAGTTGATCCTT+TGG | - | chr3.2:69178343-69178362 | None:intergenic | 30.0% |
! | ATCCAAACATAACTCACTTT+TGG | - | chr3.2:69178798-69178817 | None:intergenic | 30.0% |
! | ATCTGATTTATGCTTGTTAG+GGG | + | chr3.2:69182731-69182750 | MS.gene25932:intron | 30.0% |
! | CAACATTTTCTTGTAATGCT+CGG | + | chr3.2:69179365-69179384 | MS.gene25932:CDS | 30.0% |
! | CATCTGATTTATGCTTGTTA+GGG | + | chr3.2:69182730-69182749 | MS.gene25932:intron | 30.0% |
! | CATTTTCATTCATCATTTGC+AGG | + | chr3.2:69183269-69183288 | MS.gene25932:intron | 30.0% |
! | CTTTCAAAAAGTTGCGATTT+TGG | + | chr3.2:69179909-69179928 | MS.gene25932:intron | 30.0% |
! | CTTTCAAAAAGTTGCGATTT+TGG | - | chr3.2:69179928-69179909 | None:intergenic | 30.0% |
! | GTAAAGGAATTTTGCGTAAT+TGG | + | chr3.2:69179152-69179171 | MS.gene25932:intron | 30.0% |
! | TTGAACTAGGATTTGTTCTT+TGG | + | chr3.2:69183599-69183618 | MS.gene25932:intron | 30.0% |
! | TTGTAGTTTTCAAAGTTAGG+GGG | + | chr3.2:69180135-69180154 | MS.gene25932:intron | 30.0% |
! | TTGTAGTTTTCATACTTAGG+GGG | - | chr3.2:69179935-69179954 | None:intergenic | 30.0% |
!! | ACAAACTTAAGGTCTTATTG+TGG | - | chr3.2:69180223-69180242 | None:intergenic | 30.0% |
!! | ACAAATGCTTTTGATTGGAA+TGG | - | chr3.2:69183685-69183704 | None:intergenic | 30.0% |
!! | AGCAAGTTTTGATATGGAAA+TGG | + | chr3.2:69179449-69179468 | MS.gene25932:intron | 30.0% |
!! | ATCGCAACTTTTTGAAAGAT+AGG | - | chr3.2:69180182-69180163 | None:intergenic | 30.0% |
!! | CAAATGCTTTTGATTGGAAT+GGG | - | chr3.2:69183684-69183703 | None:intergenic | 30.0% |
!! | CGCAACATTTTGAAAAGATA+AGG | - | chr3.2:69180029-69180048 | None:intergenic | 30.0% |
!! | CGCAACTTTTTGAAAGATAA+GGG | + | chr3.2:69180165-69180184 | MS.gene25932:intron | 30.0% |
!! | GCAACTTTTTGAAAGATAAG+GGG | + | chr3.2:69180166-69180185 | MS.gene25932:intron | 30.0% |
!! | TCCTTAGTATTGATTCACTT+TGG | + | chr3.2:69179259-69179278 | MS.gene25932:intron | 30.0% |
!! | TCGCAACTTTTTGAAAGATA+AGG | + | chr3.2:69180164-69180183 | MS.gene25932:intron | 30.0% |
!! | TCGCAACTTTTTGAAAGATA+GGG | - | chr3.2:69180183-69180164 | None:intergenic | 30.0% |
!! | TCTTATGTAAAGTGTTGTCT+AGG | - | chr3.2:69183729-69183748 | None:intergenic | 30.0% |
!! | TTACACCTCTAGAATCAATT+TGG | + | chr3.2:69178964-69178983 | MS.gene25932:intron | 30.0% |
!! | TTTTAATTGGGTCCTTATCA+TGG | - | chr3.2:69181337-69181356 | None:intergenic | 30.0% |
!!! | CTCTTGTATTTTGAGTTTGT+AGG | + | chr3.2:69181742-69181761 | MS.gene25932:intron | 30.0% |
!!! | GAGATATTGGTTTTCTTGAT+GGG | + | chr3.2:69181667-69181686 | MS.gene25932:intron | 30.0% |
!!! | TGAGATATTGGTTTTCTTGA+TGG | + | chr3.2:69181666-69181685 | MS.gene25932:intron | 30.0% |
AAACCAACAAGAGAAACCAA+TGG | - | chr3.2:69180680-69180699 | None:intergenic | 35.0% | |
AAGCATAAATCAGATGCATG+AGG | - | chr3.2:69182726-69182745 | None:intergenic | 35.0% | |
AATACCAGCAATATAAGCTC+TGG | - | chr3.2:69180844-69180863 | None:intergenic | 35.0% | |
AATAGGCTAAAGTGCAACTT+TGG | + | chr3.2:69179878-69179897 | MS.gene25932:intron | 35.0% | |
AATTTGCACAAATAGTCGGA+AGG | - | chr3.2:69180478-69180497 | None:intergenic | 35.0% | |
ACAATCTCAATTATTCTCGC+TGG | + | chr3.2:69179655-69179674 | MS.gene25932:CDS | 35.0% | |
AGAGCATATTTCCCTAAACA+TGG | - | chr3.2:69179968-69179987 | None:intergenic | 35.0% | |
AGCATATTTCCCTAAACATG+GGG | - | chr3.2:69179966-69179985 | None:intergenic | 35.0% | |
AGTTCCATATCCCTTTCAAT+GGG | + | chr3.2:69181770-69181789 | MS.gene25932:CDS | 35.0% | |
ATAGTGACACCATTATGTGT+AGG | - | chr3.2:69182385-69182404 | None:intergenic | 35.0% | |
ATTGCTGGTATTTGTTTCAC+AGG | + | chr3.2:69180852-69180871 | MS.gene25932:CDS | 35.0% | |
CAACATTTCTATCACTGTGT+AGG | + | chr3.2:69183085-69183104 | MS.gene25932:intron | 35.0% | |
CAATAGACAAAATGCCATCA+AGG | - | chr3.2:69181236-69181255 | None:intergenic | 35.0% | |
CATATTTCCCTTAAGTTAGG+GGG | - | chr3.2:69179996-69180015 | None:intergenic | 35.0% | |
CGAGATCAAATATACAAGCA+TGG | - | chr3.2:69181285-69181304 | None:intergenic | 35.0% | |
CTACACAGTGATAGAAATGT+TGG | - | chr3.2:69183087-69183106 | None:intergenic | 35.0% | |
GACAAGTACAAGTCATTCAA+GGG | + | chr3.2:69183790-69183809 | MS.gene25932:CDS | 35.0% | |
GAGCATATTTCCCTAAACAT+GGG | - | chr3.2:69179967-69179986 | None:intergenic | 35.0% | |
GAGCTTTCATTGCTGTATAT+AGG | + | chr3.2:69182513-69182532 | MS.gene25932:CDS | 35.0% | |
GAGGGATTCATCTATTAGAA+AGG | + | chr3.2:69183747-69183766 | MS.gene25932:CDS | 35.0% | |
GCATCTGATTTATGCTTGTT+AGG | + | chr3.2:69182729-69182748 | MS.gene25932:intron | 35.0% | |
GCGATTTAAAAGCTTCTGAT+TGG | + | chr3.2:69181304-69181323 | MS.gene25932:intron | 35.0% | |
GCTATTTGATTGGAACTGTT+AGG | + | chr3.2:69180244-69180263 | MS.gene25932:intron | 35.0% | |
GTTGCTAAATGTGTAGAGAT+TGG | + | chr3.2:69180814-69180833 | MS.gene25932:CDS | 35.0% | |
TAAAAGGGGAGAAATGTACT+CGG | - | chr3.2:69183057-69183076 | None:intergenic | 35.0% | |
TAAGAATAGAAGGTGGCAAT+GGG | - | chr3.2:69182553-69182572 | None:intergenic | 35.0% | |
TACGTGACAGTTCAATGATA+TGG | + | chr3.2:69183651-69183670 | MS.gene25932:intron | 35.0% | |
TCAATACTAAGGAAAAGGAG+AGG | - | chr3.2:69179252-69179271 | None:intergenic | 35.0% | |
TCATCTATTAGAAAGGACAG+AGG | + | chr3.2:69183754-69183773 | MS.gene25932:CDS | 35.0% | |
TCTATTGTGTTTGTGCTCTA+AGG | - | chr3.2:69181616-69181635 | None:intergenic | 35.0% | |
TCTTCTGATAAGACCTCAAT+CGG | - | chr3.2:69179703-69179722 | None:intergenic | 35.0% | |
TGAAATCACACAACTAACCA+AGG | - | chr3.2:69181202-69181221 | None:intergenic | 35.0% | |
TGCCTATTCTTTGCTTATGT+TGG | + | chr3.2:69183163-69183182 | MS.gene25932:CDS | 35.0% | |
TGTTGCTGGTATTAACACAT+TGG | + | chr3.2:69179567-69179586 | MS.gene25932:CDS | 35.0% | |
! | AACTTTGAAAACTGCTGAGA+AGG | - | chr3.2:69180103-69180122 | None:intergenic | 35.0% |
! | AGTGTGTGATTGTTTGCTTT+TGG | - | chr3.2:69179844-69179863 | None:intergenic | 35.0% |
! | CAAATAGTACTAGGCTTTAG+TGG | + | chr3.2:69180376-69180395 | MS.gene25932:CDS | 35.0% |
! | CTCAGCAGTTTTCAAAGTTA+GGG | + | chr3.2:69180104-69180123 | MS.gene25932:intron | 35.0% |
! | CTTTTAACCCCCTAACTTAA+GGG | + | chr3.2:69179986-69180005 | MS.gene25932:intron | 35.0% |
! | GATCTGGTTCATTACTGAAT+CGG | - | chr3.2:69179681-69179700 | None:intergenic | 35.0% |
! | GGAGATTTTTATCACTGAAG+TGG | + | chr3.2:69181535-69181554 | MS.gene25932:intron | 35.0% |
! | GGATTGTTTGGAACAATTAG+CGG | + | chr3.2:69182772-69182791 | MS.gene25932:CDS | 35.0% |
! | GGTGTTATGTAACATCACTA+AGG | + | chr3.2:69179095-69179114 | MS.gene25932:intron | 35.0% |
! | TCAGCAGTTTTCAAAGTTAG+GGG | + | chr3.2:69180105-69180124 | MS.gene25932:intron | 35.0% |
! | TCTCAGCAGTTTTCAAAGTT+AGG | + | chr3.2:69180103-69180122 | MS.gene25932:intron | 35.0% |
! | TCTGATTTATGCTTGTTAGG+GGG | + | chr3.2:69182732-69182751 | MS.gene25932:intron | 35.0% |
! | TCTTTTAACCCCCTAACTTA+AGG | + | chr3.2:69179985-69180004 | MS.gene25932:intron | 35.0% |
! | TGTACGAATTAGGTTTTCCT+GGG | + | chr3.2:69180705-69180724 | MS.gene25932:CDS | 35.0% |
! | TTGTACGAATTAGGTTTTCC+TGG | + | chr3.2:69180704-69180723 | MS.gene25932:CDS | 35.0% |
! | TTTTATCAGTGCATTGAAGC+TGG | + | chr3.2:69181992-69182011 | MS.gene25932:intron | 35.0% |
!! | AGGACTAGCAAGTTTTGATA+TGG | + | chr3.2:69179443-69179462 | MS.gene25932:intron | 35.0% |
!! | ATGGTTGATTCTTTTCCTCA+AGG | + | chr3.2:69182215-69182234 | MS.gene25932:intron | 35.0% |
!! | CAATCAAAAGCATTTGTTGC+GGG | + | chr3.2:69183688-69183707 | MS.gene25932:CDS | 35.0% |
!! | CCAATCAAAAGCATTTGTTG+CGG | + | chr3.2:69183687-69183706 | MS.gene25932:CDS | 35.0% |
!! | CGCAACTTTTTGAAAGATAG+GGG | - | chr3.2:69179905-69179924 | None:intergenic | 35.0% |
!! | GCAACTTTTTGAAAGATAGG+GGG | - | chr3.2:69179904-69179923 | None:intergenic | 35.0% |
!! | GGCCATTTTGAAAAGATAAG+GGG | - | chr3.2:69180059-69180078 | None:intergenic | 35.0% |
!! | GGGCCATTTTGAAAAGATAA+GGG | - | chr3.2:69180060-69180079 | None:intergenic | 35.0% |
!! | GTATACTCATTGAAGTACTG+TGG | - | chr3.2:69183389-69183408 | None:intergenic | 35.0% |
!! | TGGTTGATTCTTTTCCTCAA+GGG | + | chr3.2:69182216-69182235 | MS.gene25932:intron | 35.0% |
!!! | GCTGCTTATTTTAAGGATCA+TGG | - | chr3.2:69183237-69183256 | None:intergenic | 35.0% |
!!! | TCTTTGTTTTTTCCGGAACT+GGG | + | chr3.2:69181969-69181988 | MS.gene25932:intron | 35.0% |
!!! | TGGTTTCTCTTGTTGGTTTT+GGG | + | chr3.2:69180681-69180700 | MS.gene25932:CDS | 35.0% |
!!! | TTGGTTTCTCTTGTTGGTTT+TGG | + | chr3.2:69180680-69180699 | MS.gene25932:CDS | 35.0% |
AAAAGAAACTAACGCCATGG+AGG | - | chr3.2:69178388-69178407 | None:intergenic | 40.0% | |
AACGAAAGATGCCATCATCA+TGG | - | chr3.2:69181829-69181848 | None:intergenic | 40.0% | |
AAGAATAGAAGGTGGCAATG+GGG | - | chr3.2:69182552-69182571 | None:intergenic | 40.0% | |
ACATTGGTGCAAACACTCTT+TGG | + | chr3.2:69179583-69179602 | MS.gene25932:CDS | 40.0% | |
AGCCTTCGACTACATGTTTA+CGG | + | chr3.2:69180731-69180750 | MS.gene25932:intron | 40.0% | |
ATACCCCGACTAAGAATAGA+AGG | - | chr3.2:69182563-69182582 | None:intergenic | 40.0% | |
ATCTTTCGTTGCTCTTGTAG+AGG | + | chr3.2:69181839-69181858 | MS.gene25932:CDS | 40.0% | |
CAATTGGGTCCTTGAGATAT+TGG | + | chr3.2:69181654-69181673 | MS.gene25932:intron | 40.0% | |
CTAAGAATAGAAGGTGGCAA+TGG | - | chr3.2:69182554-69182573 | None:intergenic | 40.0% | |
GAGTTCCATATCCCTTTCAA+TGG | + | chr3.2:69181769-69181788 | MS.gene25932:CDS | 40.0% | |
GATTACCTGCAGTAATTGGA+GGG | + | chr3.2:69179611-69179630 | MS.gene25932:CDS | 40.0% | |
GCATATTTCCCTAAACATGG+GGG | - | chr3.2:69179965-69179984 | None:intergenic | 40.0% | |
GGACAAGTACAAGTCATTCA+AGG | + | chr3.2:69183789-69183808 | MS.gene25932:CDS | 40.0% | |
GGTCTCACATTCTTACTAAG+TGG | + | chr3.2:69180423-69180442 | MS.gene25932:intron | 40.0% | |
GTTAGGCTAAAGTGCAACTT+TGG | - | chr3.2:69180192-69180211 | None:intergenic | 40.0% | |
GTTCCATATCCCTTTCAATG+GGG | + | chr3.2:69181771-69181790 | MS.gene25932:CDS | 40.0% | |
GTTTCAGTCTTACACAGACA+CGG | - | chr3.2:69182803-69182822 | None:intergenic | 40.0% | |
TAATGAACCAGATCCGATTG+AGG | + | chr3.2:69179687-69179706 | MS.gene25932:CDS | 40.0% | |
TACAATGCAGCAATGATTGC+AGG | - | chr3.2:69183142-69183161 | None:intergenic | 40.0% | |
TATGCTGTTCTACTCACTGT+TGG | + | chr3.2:69181100-69181119 | MS.gene25932:CDS | 40.0% | |
TCAACATCGATGCTTGTGTT+GGG | + | chr3.2:69180786-69180805 | MS.gene25932:intron | 40.0% | |
TCACGATTACCTGCAGTAAT+TGG | + | chr3.2:69179607-69179626 | MS.gene25932:CDS | 40.0% | |
TGAAATTCAGCTGGCACAAA+AGG | - | chr3.2:69182059-69182078 | None:intergenic | 40.0% | |
TGAGATTGTCGTTGGAACAT+AGG | - | chr3.2:69179644-69179663 | None:intergenic | 40.0% | |
TGCCACCTTCTATTCTTAGT+CGG | + | chr3.2:69182555-69182574 | MS.gene25932:CDS | 40.0% | |
TGTTGGGCGTTAGTCATAAA+TGG | + | chr3.2:69182196-69182215 | MS.gene25932:intron | 40.0% | |
TTGATGGGAATCTACGTTCT+AGG | + | chr3.2:69181682-69181701 | MS.gene25932:intron | 40.0% | |
! | ATTTATGCTTGTTAGGGGGT+TGG | + | chr3.2:69182736-69182755 | MS.gene25932:intron | 40.0% |
! | CAGCAGTTTTCAAAGTTAGG+GGG | + | chr3.2:69180106-69180125 | MS.gene25932:intron | 40.0% |
! | CCGCAACAAATGCTTTTGAT+TGG | - | chr3.2:69183690-69183709 | None:intergenic | 40.0% |
! | GGCCCCTTATCTTTTCAAAA+TGG | + | chr3.2:69180054-69180073 | MS.gene25932:intron | 40.0% |
! | GGGATCCAAATTGATTCTAG+AGG | - | chr3.2:69178972-69178991 | None:intergenic | 40.0% |
! | GTACGAATTAGGTTTTCCTG+GGG | + | chr3.2:69180706-69180725 | MS.gene25932:CDS | 40.0% |
! | TCTTTTTGTACACAGTCCAC+TGG | + | chr3.2:69182491-69182510 | MS.gene25932:intron | 40.0% |
! | TGTGGTTCATCTGATTTTGC+TGG | - | chr3.2:69178310-69178329 | None:intergenic | 40.0% |
! | TTCTATTTGCTGCTTGTAGG+CGG | + | chr3.2:69179513-69179532 | MS.gene25932:intron | 40.0% |
! | TTTGGTAGTTGATCCTTTGG+TGG | - | chr3.2:69178340-69178359 | None:intergenic | 40.0% |
!! | AATTTTGGTCCCCCATGTTT+AGG | + | chr3.2:69179953-69179972 | MS.gene25932:intron | 40.0% |
!! | ATTTTGGTCCCCCATGTTTA+GGG | + | chr3.2:69179954-69179973 | MS.gene25932:intron | 40.0% |
!! | GGGGCCATTTTGAAAAGATA+AGG | - | chr3.2:69180061-69180080 | None:intergenic | 40.0% |
!! | GTTCCATTGGTTTCTCTTGT+TGG | + | chr3.2:69180674-69180693 | MS.gene25932:CDS | 40.0% |
!! | TTCAAAATGGCCCCTTGTTT+TGG | + | chr3.2:69180067-69180086 | MS.gene25932:intron | 40.0% |
!!! | CAGAGAAAATGCTGGTCTTT+TGG | + | chr3.2:69182906-69182925 | MS.gene25932:intron | 40.0% |
!!! | CGCCTTGTGATTTTAGTTCA+TGG | + | chr3.2:69180927-69180946 | MS.gene25932:intron | 40.0% |
!!! | GAAACTCTGCTTTTTGTTGC+TGG | + | chr3.2:69179553-69179572 | MS.gene25932:CDS | 40.0% |
!!! | GGTTTTGGGTTGTACGAATT+AGG | + | chr3.2:69180695-69180714 | MS.gene25932:CDS | 40.0% |
!!! | GTCTTTGTTTTTTCCGGAAC+TGG | + | chr3.2:69181968-69181987 | MS.gene25932:intron | 40.0% |
AAGATAATGAGGGCAGTCCA+GGG | + | chr3.2:69180328-69180347 | MS.gene25932:CDS | 45.0% | |
AATGATTGCAGGTGGGATAG+AGG | - | chr3.2:69183131-69183150 | None:intergenic | 45.0% | |
AATGCAGCAATGATTGCAGG+TGG | - | chr3.2:69183139-69183158 | None:intergenic | 45.0% | |
AATTGGGTCCTTATCATGGC+AGG | - | chr3.2:69181333-69181352 | None:intergenic | 45.0% | |
ACCAATGGAACAGCTGAAAG+TGG | - | chr3.2:69180665-69180684 | None:intergenic | 45.0% | |
ACCTTGCAACATTACGCCAA+AGG | - | chr3.2:69180402-69180421 | None:intergenic | 45.0% | |
ACTAAGGAAAAGGAGAGGCT+GGG | - | chr3.2:69179247-69179266 | None:intergenic | 45.0% | |
ACTGCCAGAGCTTATATTGC+TGG | + | chr3.2:69180837-69180856 | MS.gene25932:CDS | 45.0% | |
ACTGCTCTTGTTCCTCAGAT+GGG | + | chr3.2:69179407-69179426 | MS.gene25932:CDS | 45.0% | |
AGAGTTGTGCAGATATCTGC+TGG | + | chr3.2:69182952-69182971 | MS.gene25932:CDS | 45.0% | |
AGATGGGAGGTGGAAATGTA+AGG | + | chr3.2:69179423-69179442 | MS.gene25932:intron | 45.0% | |
ATCTGAGGAACAAGAGCAGT+GGG | - | chr3.2:69179407-69179426 | None:intergenic | 45.0% | |
ATGCAGCAATGATTGCAGGT+GGG | - | chr3.2:69183138-69183157 | None:intergenic | 45.0% | |
ATTGGGTCCTTATCATGGCA+GGG | - | chr3.2:69181332-69181351 | None:intergenic | 45.0% | |
CACCGTAAACATGTAGTCGA+AGG | - | chr3.2:69180736-69180755 | None:intergenic | 45.0% | |
CATTCATCATTTGCAGGAGC+TGG | + | chr3.2:69183275-69183294 | MS.gene25932:intron | 45.0% | |
CCACCTTCTATTCTTAGTCG+GGG | + | chr3.2:69182557-69182576 | MS.gene25932:CDS | 45.0% | |
CGATTACCTGCAGTAATTGG+AGG | + | chr3.2:69179610-69179629 | MS.gene25932:CDS | 45.0% | |
CTCAACATCGATGCTTGTGT+TGG | + | chr3.2:69180785-69180804 | MS.gene25932:intron | 45.0% | |
CTGTTCTACTCACTGTTGGA+GGG | + | chr3.2:69181104-69181123 | MS.gene25932:CDS | 45.0% | |
CTTCGACTACATGTTTACGG+TGG | + | chr3.2:69180734-69180753 | MS.gene25932:intron | 45.0% | |
GAAAGGACAGAGGCAAACAT+TGG | + | chr3.2:69183764-69183783 | MS.gene25932:CDS | 45.0% | |
GACTTATAGATGCTGCTCCT+TGG | + | chr3.2:69181182-69181201 | MS.gene25932:CDS | 45.0% | |
GATAAGACCTCAATCGGATC+TGG | - | chr3.2:69179697-69179716 | None:intergenic | 45.0% | |
GCCACCTTCTATTCTTAGTC+GGG | + | chr3.2:69182556-69182575 | MS.gene25932:CDS | 45.0% | |
TAAGACCCTCCAATTACTGC+AGG | - | chr3.2:69179619-69179638 | None:intergenic | 45.0% | |
TACAGCAATGAAAGCTCCAG+TGG | - | chr3.2:69182510-69182529 | None:intergenic | 45.0% | |
TACTAAGGAAAAGGAGAGGC+TGG | - | chr3.2:69179248-69179267 | None:intergenic | 45.0% | |
TCCACTTTCAGCTGTTCCAT+TGG | + | chr3.2:69180661-69180680 | MS.gene25932:CDS | 45.0% | |
TGTGCCACATGTGTTGCATT+CGG | + | chr3.2:69181021-69181040 | MS.gene25932:CDS | 45.0% | |
TGTTCTACTCACTGTTGGAG+GGG | + | chr3.2:69181105-69181124 | MS.gene25932:CDS | 45.0% | |
TTCTATTCAATTGCCAGGGG+CGG | + | chr3.2:69182312-69182331 | MS.gene25932:intron | 45.0% | |
TTGGCGTAATGTTGCAAGGT+TGG | + | chr3.2:69180402-69180421 | MS.gene25932:intron | 45.0% | |
TTTCCCGAATGCAACACATG+TGG | - | chr3.2:69181028-69181047 | None:intergenic | 45.0% | |
TTTCCCTGCAGAGAAAATGC+TGG | + | chr3.2:69182898-69182917 | MS.gene25932:intron | 45.0% | |
TTTCGGTGGAGAACCGTTAT+AGG | - | chr3.2:69181131-69181150 | None:intergenic | 45.0% | |
! | AAGACCAGCATTTTCTCTGC+AGG | - | chr3.2:69182905-69182924 | None:intergenic | 45.0% |
! | AGACCAGCATTTTCTCTGCA+GGG | - | chr3.2:69182904-69182923 | None:intergenic | 45.0% |
! | AGTTGATCCTTTGGTGGATG+TGG | - | chr3.2:69178334-69178353 | None:intergenic | 45.0% |
! | GCACTGATAAAACCCAGTTC+CGG | - | chr3.2:69181984-69182003 | None:intergenic | 45.0% |
! | TACTAGGCTTTAGTGGCCTT+TGG | + | chr3.2:69180383-69180402 | MS.gene25932:CDS | 45.0% |
!! | AAGCAACAATAAGAGCACCC+TGG | - | chr3.2:69180348-69180367 | None:intergenic | 45.0% |
!! | GACTGTTTCTATCTCCCTTG+AGG | - | chr3.2:69182233-69182252 | None:intergenic | 45.0% |
!! | AATTAAAAAATATATTATTC+AGG | + | chr3.2:69179057-69179076 | MS.gene25932:intron | 5.0% |
!!! | TTTTAAATAAGTTTTTAATT+GGG | - | chr3.2:69181349-69181368 | None:intergenic | 5.0% |
!!! | TTTTTAAATAAGTTTTTAAT+TGG | - | chr3.2:69181350-69181369 | None:intergenic | 5.0% |
ACACAGGTGGAAGATGGGTA+TGG | + | chr3.2:69183435-69183454 | MS.gene25932:intron | 50.0% | |
ACATTTCCACCTCCCATCTG+AGG | - | chr3.2:69179422-69179441 | None:intergenic | 50.0% | |
ACCACAACCACATCCACCAA+AGG | + | chr3.2:69178324-69178343 | MS.gene25932:CDS | 50.0% | |
ACTGTTGGAGGGGCCTATAA+CGG | + | chr3.2:69181115-69181134 | MS.gene25932:CDS | 50.0% | |
AGAAACTAACGCCATGGAGG+AGG | - | chr3.2:69178385-69178404 | None:intergenic | 50.0% | |
AGGACAGAGGCAAACATTGG+TGG | + | chr3.2:69183767-69183786 | MS.gene25932:CDS | 50.0% | |
AGTCCACACAGGTGGAAGAT+GGG | + | chr3.2:69183430-69183449 | MS.gene25932:CDS | 50.0% | |
ATACCCATCTTCCACCTGTG+TGG | - | chr3.2:69183436-69183455 | None:intergenic | 50.0% | |
ATTGGTCCCCTGCCATGATA+AGG | + | chr3.2:69181322-69181341 | MS.gene25932:intron | 50.0% | |
CAAGGGTGACACAAGAAGTG+AGG | + | chr3.2:69183807-69183826 | MS.gene25932:CDS | 50.0% | |
CACTGCTCTTGTTCCTCAGA+TGG | + | chr3.2:69179406-69179425 | MS.gene25932:CDS | 50.0% | |
CATCTGAGGAACAAGAGCAG+TGG | - | chr3.2:69179408-69179427 | None:intergenic | 50.0% | |
CCCCGACTAAGAATAGAAGG+TGG | - | chr3.2:69182560-69182579 | None:intergenic | 50.0% | |
CGACACGTGTCCAAAACAAG+GGG | - | chr3.2:69180080-69180099 | None:intergenic | 50.0% | |
GAAGATAATGAGGGCAGTCC+AGG | + | chr3.2:69180327-69180346 | MS.gene25932:CDS | 50.0% | |
GCATTACTAGTCCTCCTCCA+TGG | + | chr3.2:69178371-69178390 | MS.gene25932:CDS | 50.0% | |
GCCTTTGGCGTAATGTTGCA+AGG | + | chr3.2:69180398-69180417 | MS.gene25932:CDS | 50.0% | |
GCGACACGTGTCCAAAACAA+GGG | - | chr3.2:69180081-69180100 | None:intergenic | 50.0% | |
GCTCCCCATTGAAAGGGATA+TGG | - | chr3.2:69181777-69181796 | None:intergenic | 50.0% | |
GCTGTTCTACTCACTGTTGG+AGG | + | chr3.2:69181103-69181122 | MS.gene25932:CDS | 50.0% | |
GCTTCGCCTGCATCAAATGT+AGG | - | chr3.2:69181801-69181820 | None:intergenic | 50.0% | |
GGACAGAGGCAAACATTGGT+GGG | + | chr3.2:69183768-69183787 | MS.gene25932:CDS | 50.0% | |
GGGAGAAATGTACTCGGATG+TGG | - | chr3.2:69183051-69183070 | None:intergenic | 50.0% | |
GTAGGTGCTCCCCATTGAAA+GGG | - | chr3.2:69181783-69181802 | None:intergenic | 50.0% | |
GTGCCACATGTGTTGCATTC+GGG | + | chr3.2:69181022-69181041 | MS.gene25932:CDS | 50.0% | |
TAAGTCCAGCACGATCAGTG+CGG | - | chr3.2:69181168-69181187 | None:intergenic | 50.0% | |
TCATCATTTGCAGGAGCTGG+AGG | + | chr3.2:69183278-69183297 | MS.gene25932:intron | 50.0% | |
TCGATGCTTGTGTTGGGTGT+AGG | + | chr3.2:69180792-69180811 | MS.gene25932:intron | 50.0% | |
TCTATTCAATTGCCAGGGGC+GGG | + | chr3.2:69182313-69182332 | MS.gene25932:intron | 50.0% | |
TGTAGGTGCTCCCCATTGAA+AGG | - | chr3.2:69181784-69181803 | None:intergenic | 50.0% | |
TTGGGTCCTTATCATGGCAG+GGG | - | chr3.2:69181331-69181350 | None:intergenic | 50.0% | |
! | AGCATTTGTTGCGGGTGTTG+TGG | + | chr3.2:69183696-69183715 | MS.gene25932:CDS | 50.0% |
! | CAGGATGTCTGTGTTTTCGG+TGG | - | chr3.2:69181145-69181164 | None:intergenic | 50.0% |
! | CGAAGCGTTTGCCATGATGA+TGG | + | chr3.2:69181815-69181834 | MS.gene25932:CDS | 50.0% |
! | CGGCAGGATGTCTGTGTTTT+CGG | - | chr3.2:69181148-69181167 | None:intergenic | 50.0% |
! | GGAGCACCTACATTTGATGC+AGG | + | chr3.2:69181792-69181811 | MS.gene25932:CDS | 50.0% |
! | GGGGTTGGCATTCTTCTATC+TGG | + | chr3.2:69182751-69182770 | MS.gene25932:CDS | 50.0% |
! | TCCTTTGGTGGATGTGGTTG+TGG | - | chr3.2:69178328-69178347 | None:intergenic | 50.0% |
!! | GGGACATTTTGATGCAGCTG+AGG | + | chr3.2:69179325-69179344 | MS.gene25932:intron | 50.0% |
!!! | CTTTTGGCTCTGACACGTGT+TGG | + | chr3.2:69182922-69182941 | MS.gene25932:CDS | 50.0% |
CAGTCCACACAGGTGGAAGA+TGG | + | chr3.2:69183429-69183448 | MS.gene25932:CDS | 55.0% | |
CATCTTCCACCTGTGTGGAC+TGG | - | chr3.2:69183431-69183450 | None:intergenic | 55.0% | |
CTATTCAATTGCCAGGGGCG+GGG | + | chr3.2:69182314-69182333 | MS.gene25932:intron | 55.0% | |
CTTGTTCCTCAGATGGGAGG+TGG | + | chr3.2:69179413-69179432 | MS.gene25932:CDS | 55.0% | |
GCAGCTGAGGCCATACTTCT+TGG | + | chr3.2:69179338-69179357 | MS.gene25932:intron | 55.0% | |
GCTCTTGTTCCTCAGATGGG+AGG | + | chr3.2:69179410-69179429 | MS.gene25932:CDS | 55.0% | |
GGCGACACGTGTCCAAAACA+AGG | - | chr3.2:69180082-69180101 | None:intergenic | 55.0% | |
TATTCAATTGCCAGGGGCGG+GGG | + | chr3.2:69182315-69182334 | MS.gene25932:intron | 55.0% | |
TGTAGTCGAAGGCTTACCCC+AGG | - | chr3.2:69180725-69180744 | None:intergenic | 55.0% | |
! | TTGCTGCTTGTAGGCGGAGA+AGG | + | chr3.2:69179519-69179538 | MS.gene25932:intron | 55.0% |
GGTTATGGGCCAGTCCACAC+AGG | + | chr3.2:69183419-69183438 | MS.gene25932:CDS | 60.0% | |
TATGGGCCAGTCCACACAGG+TGG | + | chr3.2:69183422-69183441 | MS.gene25932:CDS | 60.0% | |
AATTGCCAGGGGCGGGGGAT+TGG | + | chr3.2:69182320-69182339 | MS.gene25932:intron | 65.0% | |
TCCAGCACGATCAGTGCGGC+AGG | - | chr3.2:69181164-69181183 | None:intergenic | 65.0% | |
TTTGACCAATCCCCCGCCCC+TGG | - | chr3.2:69182328-69182347 | None:intergenic | 65.0% | |
! | TCCTGCCGCACTGATCGTGC+TGG | + | chr3.2:69181160-69181179 | MS.gene25932:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 69178286 | 69183879 | 69178286 | ID=MS.gene25932 |
chr3.2 | mRNA | 69178286 | 69183879 | 69178286 | ID=MS.gene25932.t1;Parent=MS.gene25932 |
chr3.2 | exon | 69178286 | 69178394 | 69178286 | ID=MS.gene25932.t1.exon1;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69178286 | 69178394 | 69178286 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
chr3.2 | exon | 69179342 | 69179439 | 69179342 | ID=MS.gene25932.t1.exon2;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69179342 | 69179439 | 69179342 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
chr3.2 | exon | 69179532 | 69179708 | 69179532 | ID=MS.gene25932.t1.exon3;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69179532 | 69179708 | 69179532 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
chr3.2 | exon | 69180319 | 69180419 | 69180319 | ID=MS.gene25932.t1.exon4;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69180319 | 69180419 | 69180319 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
chr3.2 | exon | 69180652 | 69180727 | 69180652 | ID=MS.gene25932.t1.exon5;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69180652 | 69180727 | 69180652 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
chr3.2 | exon | 69180814 | 69180873 | 69180814 | ID=MS.gene25932.t1.exon6;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69180814 | 69180873 | 69180814 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
chr3.2 | exon | 69181019 | 69181203 | 69181019 | ID=MS.gene25932.t1.exon7;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69181019 | 69181203 | 69181019 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
chr3.2 | exon | 69181764 | 69181860 | 69181764 | ID=MS.gene25932.t1.exon8;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69181764 | 69181860 | 69181764 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
chr3.2 | exon | 69182506 | 69182592 | 69182506 | ID=MS.gene25932.t1.exon9;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69182506 | 69182592 | 69182506 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
chr3.2 | exon | 69182751 | 69182809 | 69182751 | ID=MS.gene25932.t1.exon10;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69182751 | 69182809 | 69182751 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
chr3.2 | exon | 69182909 | 69183000 | 69182909 | ID=MS.gene25932.t1.exon11;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69182909 | 69183000 | 69182909 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
chr3.2 | exon | 69183107 | 69183184 | 69183107 | ID=MS.gene25932.t1.exon12;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69183107 | 69183184 | 69183107 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
chr3.2 | exon | 69183291 | 69183451 | 69183291 | ID=MS.gene25932.t1.exon13;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69183291 | 69183451 | 69183291 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
chr3.2 | exon | 69183661 | 69183879 | 69183661 | ID=MS.gene25932.t1.exon14;Parent=MS.gene25932.t1 |
chr3.2 | CDS | 69183661 | 69183879 | 69183661 | ID=cds.MS.gene25932.t1;Parent=MS.gene25932.t1 |
Gene Sequence |
Protein sequence |