Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70604.t1 | XP_013461026.1 | 99.6 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 4.20E-304 | 1053.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70604.t1 | Q27GI3 | 86.1 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 8.2e-272 | 937.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70604.t1 | A0A072VA43 | 99.6 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 3.1e-304 | 1053.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene70604 | 0.819818 | 9.51E-53 | -1.69E-46 |
| MS.gene049697 | MS.gene70604 | 0.822594 | 2.18E-53 | -1.69E-46 |
| MS.gene050630 | MS.gene70604 | 0.802789 | 4.75E-49 | -1.69E-46 |
| MS.gene050667 | MS.gene70604 | 0.853883 | 1.78E-61 | -1.69E-46 |
| MS.gene051067 | MS.gene70604 | 0.821235 | 4.50E-53 | -1.69E-46 |
| MS.gene051087 | MS.gene70604 | 0.810327 | 1.22E-50 | -1.69E-46 |
| MS.gene052367 | MS.gene70604 | 0.816135 | 6.46E-52 | -1.69E-46 |
| MS.gene053283 | MS.gene70604 | 0.807459 | 5.00E-50 | -1.69E-46 |
| MS.gene053500 | MS.gene70604 | 0.823879 | 1.09E-53 | -1.69E-46 |
| MS.gene054614 | MS.gene70604 | 0.812739 | 3.64E-51 | -1.69E-46 |
| MS.gene056041 | MS.gene70604 | 0.800471 | 1.42E-48 | -1.69E-46 |
| MS.gene056520 | MS.gene70604 | 0.804158 | 2.47E-49 | -1.69E-46 |
| MS.gene057669 | MS.gene70604 | 0.806256 | 8.98E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene70604 | MS.gene012865 | PPI |
| MS.gene70604 | MS.gene044204 | PPI |
| MS.gene70604 | MS.gene32869 | PPI |
| MS.gene70604 | MS.gene015069 | PPI |
| MS.gene70604 | MS.gene27812 | PPI |
| MS.gene70604 | MS.gene83067 | PPI |
| MS.gene70604 | MS.gene68064 | PPI |
| MS.gene70604 | MS.gene98973 | PPI |
| MS.gene70604 | MS.gene86930 | PPI |
| MS.gene70604 | MS.gene25800 | PPI |
| MS.gene70604 | MS.gene91317 | PPI |
| MS.gene70604 | MS.gene058853 | PPI |
| MS.gene70604 | MS.gene64768 | PPI |
| MS.gene015655 | MS.gene70604 | PPI |
| MS.gene70604 | MS.gene010624 | PPI |
| MS.gene70604 | MS.gene70718 | PPI |
| MS.gene70604 | MS.gene62686 | PPI |
| MS.gene70604 | MS.gene026529 | PPI |
| MS.gene70604 | MS.gene96701 | PPI |
| MS.gene70604 | MS.gene052674 | PPI |
| MS.gene70604 | MS.gene53408 | PPI |
| MS.gene70604 | MS.gene020517 | PPI |
| MS.gene70604 | MS.gene052675 | PPI |
| MS.gene70604 | MS.gene59470 | PPI |
| MS.gene70604 | MS.gene052677 | PPI |
| MS.gene70604 | MS.gene71606 | PPI |
| MS.gene37474 | MS.gene70604 | PPI |
| MS.gene70604 | MS.gene27811 | PPI |
| MS.gene70604 | MS.gene25185 | PPI |
| MS.gene70604 | MS.gene023585 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70604.t1 | MTR_3g078270 | 99.624 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1068 |
| MS.gene70604.t1 | MTR_4g106750 | 90.038 | 532 | 53 | 0 | 1 | 532 | 1 | 532 | 0.0 | 985 |
| MS.gene70604.t1 | MTR_4g106750 | 90.476 | 483 | 46 | 0 | 50 | 532 | 1 | 483 | 0.0 | 892 |
| MS.gene70604.t1 | MTR_8g063220 | 81.051 | 533 | 100 | 1 | 1 | 532 | 1 | 533 | 0.0 | 891 |
| MS.gene70604.t1 | MTR_5g035180 | 76.236 | 526 | 124 | 1 | 8 | 532 | 13 | 538 | 0.0 | 837 |
| MS.gene70604.t1 | MTR_4g106750 | 89.730 | 370 | 38 | 0 | 163 | 532 | 11 | 380 | 0.0 | 685 |
| MS.gene70604.t1 | MTR_3g103230 | 60.190 | 525 | 205 | 2 | 9 | 532 | 33 | 554 | 0.0 | 676 |
| MS.gene70604.t1 | MTR_1g106085 | 59.280 | 528 | 212 | 2 | 4 | 531 | 2 | 526 | 0.0 | 641 |
| MS.gene70604.t1 | MTR_5g022110 | 58.846 | 520 | 211 | 1 | 13 | 532 | 31 | 547 | 0.0 | 636 |
| MS.gene70604.t1 | MTR_8g086520 | 59.653 | 518 | 207 | 1 | 13 | 530 | 7 | 522 | 0.0 | 633 |
| MS.gene70604.t1 | MTR_2g016460 | 58.238 | 522 | 216 | 1 | 9 | 530 | 3 | 522 | 0.0 | 625 |
| MS.gene70604.t1 | MTR_3g080390 | 59.417 | 515 | 206 | 2 | 17 | 530 | 6 | 518 | 0.0 | 612 |
| MS.gene70604.t1 | MTR_8g086520 | 59.513 | 452 | 183 | 0 | 9 | 460 | 3 | 454 | 0.0 | 544 |
| MS.gene70604.t1 | MTR_1g021120 | 52.632 | 513 | 241 | 1 | 19 | 531 | 36 | 546 | 0.0 | 536 |
| MS.gene70604.t1 | MTR_8g086520 | 60.644 | 404 | 157 | 1 | 127 | 530 | 5 | 406 | 3.30e-177 | 505 |
| MS.gene70604.t1 | MTR_8g086520 | 60.150 | 399 | 159 | 0 | 9 | 407 | 3 | 401 | 9.80e-169 | 483 |
| MS.gene70604.t1 | MTR_8g068550 | 34.775 | 555 | 317 | 7 | 10 | 529 | 211 | 755 | 8.95e-108 | 339 |
| MS.gene70604.t1 | MTR_5g032020 | 36.486 | 518 | 291 | 4 | 40 | 525 | 182 | 693 | 8.91e-104 | 327 |
| MS.gene70604.t1 | MTR_2g084895 | 34.990 | 523 | 296 | 6 | 43 | 529 | 164 | 678 | 3.69e-94 | 301 |
| MS.gene70604.t1 | MTR_4g055290 | 34.667 | 525 | 290 | 8 | 43 | 529 | 171 | 680 | 7.11e-90 | 290 |
| MS.gene70604.t1 | MTR_2g103510 | 32.115 | 520 | 315 | 6 | 26 | 529 | 94 | 591 | 4.23e-86 | 278 |
| MS.gene70604.t1 | MTR_8g086535 | 65.000 | 100 | 35 | 0 | 308 | 407 | 18 | 117 | 6.02e-36 | 130 |
| MS.gene70604.t1 | MTR_1g079900 | 40.945 | 127 | 52 | 5 | 420 | 530 | 59 | 178 | 2.45e-20 | 89.7 |
| MS.gene70604.t1 | MTR_3g087320 | 55.224 | 67 | 16 | 1 | 461 | 527 | 72 | 124 | 2.66e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70604.t1 | AT5G62890 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| MS.gene70604.t1 | AT5G62890 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| MS.gene70604.t1 | AT5G62890 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| MS.gene70604.t1 | AT5G49990 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| MS.gene70604.t1 | AT5G49990 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| MS.gene70604.t1 | AT5G49990 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| MS.gene70604.t1 | AT5G49990 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| MS.gene70604.t1 | AT1G60030 | 76.952 | 525 | 121 | 0 | 8 | 532 | 14 | 538 | 0.0 | 851 |
| MS.gene70604.t1 | AT5G62890 | 85.652 | 460 | 66 | 0 | 1 | 460 | 1 | 460 | 0.0 | 810 |
| MS.gene70604.t1 | AT1G10540 | 68.587 | 538 | 162 | 3 | 1 | 531 | 1 | 538 | 0.0 | 777 |
| MS.gene70604.t1 | AT1G49960 | 61.111 | 522 | 203 | 0 | 10 | 531 | 4 | 525 | 0.0 | 649 |
| MS.gene70604.t1 | AT2G34190 | 58.880 | 518 | 211 | 1 | 13 | 530 | 7 | 522 | 0.0 | 633 |
| MS.gene70604.t1 | AT1G65550 | 55.198 | 529 | 228 | 2 | 10 | 531 | 14 | 540 | 0.0 | 616 |
| MS.gene70604.t1 | AT2G05760 | 57.282 | 515 | 217 | 2 | 17 | 530 | 6 | 518 | 0.0 | 605 |
| MS.gene70604.t1 | AT1G10540 | 68.041 | 388 | 117 | 3 | 1 | 381 | 1 | 388 | 0.0 | 543 |
| MS.gene70604.t1 | AT2G26510 | 51.257 | 517 | 245 | 3 | 18 | 531 | 36 | 548 | 1.68e-180 | 519 |
| MS.gene70604.t1 | AT5G25420 | 49.436 | 443 | 154 | 5 | 10 | 452 | 26 | 398 | 1.33e-143 | 420 |
| MS.gene70604.t1 | AT2G26510 | 52.861 | 367 | 167 | 2 | 18 | 381 | 36 | 399 | 1.92e-126 | 376 |
| MS.gene70604.t1 | AT2G26510 | 52.260 | 354 | 163 | 2 | 18 | 368 | 36 | 386 | 6.07e-120 | 360 |
| MS.gene70604.t1 | AT2G27810 | 35.509 | 521 | 297 | 5 | 43 | 529 | 186 | 701 | 6.90e-93 | 298 |
| MS.gene70604.t1 | AT4G38050 | 35.249 | 522 | 300 | 5 | 40 | 529 | 189 | 704 | 2.27e-92 | 297 |
| MS.gene70604.t1 | AT2G27810 | 34.312 | 545 | 295 | 7 | 43 | 529 | 186 | 725 | 3.33e-88 | 287 |
| MS.gene70604.t1 | AT2G27810 | 39.012 | 405 | 228 | 3 | 43 | 429 | 186 | 589 | 1.01e-78 | 258 |
| MS.gene70604.t1 | AT2G27810 | 39.106 | 358 | 199 | 3 | 43 | 382 | 186 | 542 | 5.02e-68 | 229 |
Find 140 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCACTGTGTAGGAAAATT+TGG | 0.153225 | 3.1:+64231232 | MS.gene70604:intron |
| TTGGTTTCTCTTGTTGGTTT+TGG | 0.211154 | 3.1:+64228818 | MS.gene70604:CDS |
| GGGGTTGGCATTCTTCTATC+TGG | 0.251901 | 3.1:+64230889 | MS.gene70604:CDS |
| CAGAGAAAATGCTGGTCTTT+TGG | 0.254875 | 3.1:+64231044 | MS.gene70604:intron |
| GTTCCATTGGTTTCTCTTGT+TGG | 0.266604 | 3.1:+64228812 | MS.gene70604:CDS |
| ATTAGGCTTCTCTATATTCT+TGG | 0.267261 | 3.1:+64231490 | MS.gene70604:CDS |
| ACATTGGTGCAAACACTCTT+TGG | 0.307293 | 3.1:+64228057 | MS.gene70604:CDS |
| ATTCTTCTATCTGGATTGTT+TGG | 0.309588 | 3.1:+64230898 | MS.gene70604:CDS |
| TCACGATTACCTGCAGTAAT+TGG | 0.310968 | 3.1:+64228081 | MS.gene70604:CDS |
| GCAGCTGAGGCCATACTTCT+TGG | 0.316014 | 3.1:+64227812 | MS.gene70604:intron |
| TTTAGAACAAAGTTCATATT+AGG | 0.323198 | 3.1:+64231473 | MS.gene70604:CDS |
| GAGCTTTCATTGCTGTATAT+AGG | 0.350680 | 3.1:+64230651 | MS.gene70604:CDS |
| TGCCTATTCTTTGCTTATGT+TGG | 0.351940 | 3.1:+64231301 | MS.gene70604:CDS |
| TTAGGCTTCTCTATATTCTT+GGG | 0.353632 | 3.1:+64231491 | MS.gene70604:CDS |
| GCCACCTTCTATTCTTAGTC+GGG | 0.361786 | 3.1:+64230694 | MS.gene70604:CDS |
| TACTAGGCTTTAGTGGCCTT+TGG | 0.362108 | 3.1:+64228521 | MS.gene70604:CDS |
| TATACAGCAATCAATGGTTA+TGG | 0.366024 | 3.1:+64231542 | MS.gene70604:CDS |
| CAAATAGTACTAGGCTTTAG+TGG | 0.377969 | 3.1:+64228514 | MS.gene70604:CDS |
| CAATCAAAAGCATTTGTTGC+GGG | 0.379620 | 3.1:+64231826 | MS.gene70604:CDS |
| GCTCCCCATTGAAAGGGATA+TGG | 0.382055 | 3.1:-64229912 | None:intergenic |
| CACTGCTCTTGTTCCTCAGA+TGG | 0.382385 | 3.1:+64227880 | MS.gene70604:CDS |
| AAGCAGAGTTTCAATTACTT+TGG | 0.386238 | 3.1:-64228016 | None:intergenic |
| TAGACAACACTTTACATAAG+AGG | 0.388088 | 3.1:+64231866 | MS.gene70604:CDS |
| GTAATGCAGTAAGAAATATT+TGG | 0.393915 | 3.1:-64226830 | None:intergenic |
| GAAGATAATGAGGGCAGTCC+AGG | 0.395646 | 3.1:+64228465 | MS.gene70604:CDS |
| ATATTTGGTAGTTGATCCTT+TGG | 0.395677 | 3.1:-64226815 | None:intergenic |
| TCTATTCTTAGTCGGGGTAT+TGG | 0.399112 | 3.1:+64230701 | MS.gene70604:CDS |
| TTTCGGTGGAGAACCGTTAT+AGG | 0.402300 | 3.1:-64229266 | None:intergenic |
| ACTTTGTTCTAAAACTGTTA+AGG | 0.406816 | 3.1:-64231463 | None:intergenic |
| ACTGCCAGAGCTTATATTGC+TGG | 0.410871 | 3.1:+64228975 | MS.gene70604:CDS |
| ATGTTGAAATCCAAGAAGTA+TGG | 0.411526 | 3.1:-64227822 | None:intergenic |
| TCCTTTGGTGGATGTGGTTG+TGG | 0.413545 | 3.1:-64226800 | None:intergenic |
| TACAATGCAGCAATGATTGC+AGG | 0.417508 | 3.1:-64231277 | None:intergenic |
| GACTTATAGATGCTGCTCCT+TGG | 0.435416 | 3.1:+64229320 | MS.gene70604:CDS |
| TGCCACCTTCTATTCTTAGT+CGG | 0.437110 | 3.1:+64230693 | MS.gene70604:CDS |
| GTGCCACATGTGTTGCATTC+GGG | 0.438570 | 3.1:+64229160 | MS.gene70604:CDS |
| GAGTTCCATATCCCTTTCAA+TGG | 0.440675 | 3.1:+64229907 | MS.gene70604:CDS |
| TCCACTTTCAGCTGTTCCAT+TGG | 0.444367 | 3.1:+64228799 | MS.gene70604:CDS |
| AAATATTTGTTTAGATTGAA+AGG | 0.450377 | 3.1:-64231982 | None:intergenic |
| TAGTCGGGGTATTGGTTGGC+AGG | 0.453343 | 3.1:+64230709 | MS.gene70604:CDS |
| GCTGTTCTACTCACTGTTGG+AGG | 0.454047 | 3.1:+64229241 | MS.gene70604:CDS |
| GTTGCTAAATGTGTAGAGAT+TGG | 0.455062 | 3.1:+64228952 | MS.gene70604:CDS |
| TCTTCTGATAAGACCTCAAT+CGG | 0.455463 | 3.1:-64228174 | None:intergenic |
| CATCTTCCACCTGTGTGGAC+TGG | 0.457011 | 3.1:-64231566 | None:intergenic |
| TCAACTCTTCAAATAGTACT+AGG | 0.457439 | 3.1:+64228505 | MS.gene70604:CDS |
| AGTTGATCCTTTGGTGGATG+TGG | 0.457879 | 3.1:-64226806 | None:intergenic |
| TTGCTGCTTGTAGGCGGAGA+AGG | 0.458011 | 3.1:+64227993 | MS.gene70604:intron |
| ATTGCTGGTATTTGTTTCAC+AGG | 0.458880 | 3.1:+64228990 | MS.gene70604:CDS |
| CTGTTCTACTCACTGTTGGA+GGG | 0.460539 | 3.1:+64229242 | MS.gene70604:CDS |
| TAAGAATAGAAGGTGGCAAT+GGG | 0.462513 | 3.1:-64230688 | None:intergenic |
| GATAAGACCTCAATCGGATC+TGG | 0.463050 | 3.1:-64228168 | None:intergenic |
| TACGTGACAGTTCAATGATA+TGG | 0.473040 | 3.1:+64231789 | MS.gene70604:intron |
| AGAATAATTGAGATTGTCGT+TGG | 0.473319 | 3.1:-64228123 | None:intergenic |
| TGAGATTGTCGTTGGAACAT+AGG | 0.474228 | 3.1:-64228115 | None:intergenic |
| GAAGCTATGGCAGGAGGAGG+AGG | 0.475226 | 3.1:+64226755 | None:intergenic |
| AGAGTTGTGCAGATATCTGC+TGG | 0.488720 | 3.1:+64231090 | MS.gene70604:CDS |
| ATACCCCGACTAAGAATAGA+AGG | 0.488782 | 3.1:-64230698 | None:intergenic |
| TACCAACATAAGCAAAGAAT+AGG | 0.490475 | 3.1:-64231303 | None:intergenic |
| TTCTTAGTCGGGGTATTGGT+TGG | 0.491475 | 3.1:+64230705 | MS.gene70604:CDS |
| CAGTCCACACAGGTGGAAGA+TGG | 0.492027 | 3.1:+64231567 | MS.gene70604:CDS |
| AGTTCCATATCCCTTTCAAT+GGG | 0.492360 | 3.1:+64229908 | MS.gene70604:CDS |
| GATCTGGTTCATTACTGAAT+CGG | 0.493059 | 3.1:-64228152 | None:intergenic |
| GGATTGTTTGGAACAATTAG+CGG | 0.502285 | 3.1:+64230910 | MS.gene70604:CDS |
| AATGATTGCAGGTGGGATAG+AGG | 0.502422 | 3.1:-64231266 | None:intergenic |
| TGTGCCACATGTGTTGCATT+CGG | 0.505553 | 3.1:+64229159 | MS.gene70604:CDS |
| AGAAATTCAAGAAGATAATG+AGG | 0.505728 | 3.1:+64228455 | MS.gene70604:intron |
| TATGCTGTTCTACTCACTGT+TGG | 0.507624 | 3.1:+64229238 | MS.gene70604:CDS |
| GGACAAGTACAAGTCATTCA+AGG | 0.513945 | 3.1:+64231927 | MS.gene70604:CDS |
| TCCTGCCGCACTGATCGTGC+TGG | 0.513982 | 3.1:+64229298 | MS.gene70604:CDS |
| ACTGCTCTTGTTCCTCAGAT+GGG | 0.514976 | 3.1:+64227881 | MS.gene70604:CDS |
| ATACAGCAATCAATGGTTAT+GGG | 0.516393 | 3.1:+64231543 | MS.gene70604:CDS |
| GAGGGATTCATCTATTAGAA+AGG | 0.518790 | 3.1:+64231885 | MS.gene70604:CDS |
| TCCAGCACGATCAGTGCGGC+AGG | 0.522111 | 3.1:-64229299 | None:intergenic |
| CTTGTTCCTCAGATGGGAGG+TGG | 0.523430 | 3.1:+64227887 | MS.gene70604:CDS |
| ATCTTTCGTTGCTCTTGTAG+AGG | 0.524901 | 3.1:+64229977 | MS.gene70604:CDS |
| TATTCACAATTGCAATTGTG+TGG | 0.525941 | 3.1:+64229212 | MS.gene70604:CDS |
| TCTTATGTAAAGTGTTGTCT+AGG | 0.530549 | 3.1:-64231864 | None:intergenic |
| TTTCCCTGCAGAGAAAATGC+TGG | 0.530895 | 3.1:+64231036 | MS.gene70604:intron |
| ACCAATGGAACAGCTGAAAG+TGG | 0.532981 | 3.1:-64228800 | None:intergenic |
| AGACAACACTTTACATAAGA+GGG | 0.533794 | 3.1:+64231867 | MS.gene70604:CDS |
| ACTGTTGGAGGGGCCTATAA+CGG | 0.535674 | 3.1:+64229253 | MS.gene70604:CDS |
| TTAGATTAAGAAGCTATGGC+AGG | 0.535979 | 3.1:+64226746 | None:intergenic |
| ATCTGAGGAACAAGAGCAGT+GGG | 0.536762 | 3.1:-64227878 | None:intergenic |
| AATACCAGCAATATAAGCTC+TGG | 0.537388 | 3.1:-64228979 | None:intergenic |
| AATGAGTATACAGCAATCAA+TGG | 0.538381 | 3.1:+64231536 | MS.gene70604:CDS |
| CGAAGCGTTTGCCATGATGA+TGG | 0.538919 | 3.1:+64229953 | MS.gene70604:CDS |
| TGTAGGTGCTCCCCATTGAA+AGG | 0.539040 | 3.1:-64229919 | None:intergenic |
| AGCATTTGTTGCGGGTGTTG+TGG | 0.545109 | 3.1:+64231834 | MS.gene70604:CDS |
| CGATTACCTGCAGTAATTGG+AGG | 0.545684 | 3.1:+64228084 | MS.gene70604:CDS |
| TTTGGTAGTTGATCCTTTGG+TGG | 0.549747 | 3.1:-64226812 | None:intergenic |
| CCAATCAAAAGCATTTGTTG+CGG | 0.549945 | 3.1:+64231825 | MS.gene70604:CDS |
| TAAGACCCTCCAATTACTGC+AGG | 0.557300 | 3.1:-64228090 | None:intergenic |
| AGAAACTAACGCCATGGAGG+AGG | 0.558083 | 3.1:-64226857 | None:intergenic |
| GCTTCGCCTGCATCAAATGT+AGG | 0.559087 | 3.1:-64229936 | None:intergenic |
| GCCTTTGGCGTAATGTTGCA+AGG | 0.561053 | 3.1:+64228536 | MS.gene70604:CDS |
| AGTCCACACAGGTGGAAGAT+GGG | 0.561280 | 3.1:+64231568 | MS.gene70604:CDS |
| TGTTCTACTCACTGTTGGAG+GGG | 0.564508 | 3.1:+64229243 | MS.gene70604:CDS |
| CTAAGAATAGAAGGTGGCAA+TGG | 0.564521 | 3.1:-64230689 | None:intergenic |
| GTAGGTGCTCCCCATTGAAA+GGG | 0.565086 | 3.1:-64229918 | None:intergenic |
| TCATCATTTGCAGGAGCTGG+AGG | 0.565976 | 3.1:+64231416 | MS.gene70604:intron |
| AACGAAAGATGCCATCATCA+TGG | 0.570031 | 3.1:-64229964 | None:intergenic |
| ACAATCTCAATTATTCTCGC+TGG | 0.570834 | 3.1:+64228129 | MS.gene70604:CDS |
| GGACAGAGGCAAACATTGGT+GGG | 0.574941 | 3.1:+64231906 | MS.gene70604:CDS |
| TAAGAAGCTATGGCAGGAGG+AGG | 0.579489 | 3.1:+64226752 | None:intergenic |
| TGTTGCTGGTATTAACACAT+TGG | 0.581871 | 3.1:+64228041 | MS.gene70604:CDS |
| GATTAAGAAGCTATGGCAGG+AGG | 0.583299 | 3.1:+64226749 | None:intergenic |
| AGGACAGAGGCAAACATTGG+TGG | 0.588315 | 3.1:+64231905 | MS.gene70604:CDS |
| GGAGCACCTACATTTGATGC+AGG | 0.588577 | 3.1:+64229930 | MS.gene70604:CDS |
| CGCACAATTAATTAAACCGA+TGG | 0.592039 | 3.1:-64232006 | None:intergenic |
| GCATTACTAGTCCTCCTCCA+TGG | 0.599317 | 3.1:+64226846 | MS.gene70604:CDS |
| GAAAGGACAGAGGCAAACAT+TGG | 0.599729 | 3.1:+64231902 | MS.gene70604:CDS |
| AAACCAACAAGAGAAACCAA+TGG | 0.606011 | 3.1:-64228815 | None:intergenic |
| TAATGAACCAGATCCGATTG+AGG | 0.607552 | 3.1:+64228161 | MS.gene70604:CDS |
| ACATTTCCACCTCCCATCTG+AGG | 0.609636 | 3.1:-64227893 | None:intergenic |
| AAGATAATGAGGGCAGTCCA+GGG | 0.610018 | 3.1:+64228466 | MS.gene70604:CDS |
| GCTCTTGTTCCTCAGATGGG+AGG | 0.615420 | 3.1:+64227884 | MS.gene70604:CDS |
| GAAATTCAAGAAGATAATGA+GGG | 0.618663 | 3.1:+64228456 | MS.gene70604:intron |
| AATGCAGCAATGATTGCAGG+TGG | 0.623862 | 3.1:-64231274 | None:intergenic |
| CCACCTTCTATTCTTAGTCG+GGG | 0.624455 | 3.1:+64230695 | MS.gene70604:CDS |
| ACCTTGCAACATTACGCCAA+AGG | 0.624889 | 3.1:-64228537 | None:intergenic |
| GATTACCTGCAGTAATTGGA+GGG | 0.629859 | 3.1:+64228085 | MS.gene70604:CDS |
| TTTCCCGAATGCAACACATG+TGG | 0.633762 | 3.1:-64229163 | None:intergenic |
| ATACCCATCTTCCACCTGTG+TGG | 0.636689 | 3.1:-64231571 | None:intergenic |
| TATGGGCCAGTCCACACAGG+TGG | 0.641196 | 3.1:+64231560 | MS.gene70604:CDS |
| CATCTGAGGAACAAGAGCAG+TGG | 0.642369 | 3.1:-64227879 | None:intergenic |
| GACAAGTACAAGTCATTCAA+GGG | 0.644339 | 3.1:+64231928 | MS.gene70604:CDS |
| ACCACAACCACATCCACCAA+AGG | 0.644503 | 3.1:+64226799 | MS.gene70604:CDS |
| TACAGCAATGAAAGCTCCAG+TGG | 0.645288 | 3.1:-64230645 | None:intergenic |
| GGTTATGGGCCAGTCCACAC+AGG | 0.660679 | 3.1:+64231557 | MS.gene70604:CDS |
| CAAGGGTGACACAAGAAGTG+AGG | 0.668674 | 3.1:+64231945 | MS.gene70604:CDS |
| GTTTCAGTCTTACACAGACA+CGG | 0.669427 | 3.1:-64230938 | None:intergenic |
| ATGCAGCAATGATTGCAGGT+GGG | 0.675249 | 3.1:-64231273 | None:intergenic |
| AAAAGAAACTAACGCCATGG+AGG | 0.701039 | 3.1:-64226860 | None:intergenic |
| AAGCAACAATAAGAGCACCC+TGG | 0.705283 | 3.1:-64228483 | None:intergenic |
| AAGAATAGAAGGTGGCAATG+GGG | 0.708313 | 3.1:-64230687 | None:intergenic |
| GTATACTCATTGAAGTACTG+TGG | 0.710895 | 3.1:-64231524 | None:intergenic |
| TCATCTATTAGAAAGGACAG+AGG | 0.717827 | 3.1:+64231892 | MS.gene70604:CDS |
| GTTCCATATCCCTTTCAATG+GGG | 0.722732 | 3.1:+64229909 | MS.gene70604:CDS |
| CCCCGACTAAGAATAGAAGG+TGG | 0.728889 | 3.1:-64230695 | None:intergenic |
| TAAGTCCAGCACGATCAGTG+CGG | 0.740720 | 3.1:-64229303 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAGCAAAAAAAAAAAA+AGG | - | chr3.1:64228423-64228442 | None:intergenic | 10.0% |
| !! | GTTGATTAAAATAAAATAAA+GGG | + | chr3.1:64226943-64226962 | MS.gene70604:intron | 10.0% |
| !! | AAATATTTGTTTAGATTGAA+AGG | - | chr3.1:64231985-64232004 | None:intergenic | 15.0% |
| !! | ATAAATGATAATCGTAATAA+TGG | + | chr3.1:64230758-64230777 | MS.gene70604:intron | 15.0% |
| !! | ATATATATAATAGTACTGTA+AGG | + | chr3.1:64230402-64230421 | MS.gene70604:intron | 15.0% |
| !! | CAATTTCATTTATATAAACA+AGG | - | chr3.1:64231006-64231025 | None:intergenic | 15.0% |
| !! | CTTGTTTATATAAATGAAAT+TGG | + | chr3.1:64231004-64231023 | MS.gene70604:intron | 15.0% |
| !! | GGTTGATTAAAATAAAATAA+AGG | + | chr3.1:64226942-64226961 | MS.gene70604:intron | 15.0% |
| !! | TTAAAAAAGAGAATATCATA+AGG | - | chr3.1:64230012-64230031 | None:intergenic | 15.0% |
| !! | TTTAACTATATAACTTGAAA+AGG | - | chr3.1:64230494-64230513 | None:intergenic | 15.0% |
| !!! | AATGAATAAATTTAAAGCTT+TGG | + | chr3.1:64229506-64229525 | MS.gene70604:intron | 15.0% |
| !!! | AATTAATTTGATGAGAAATT+TGG | + | chr3.1:64227777-64227796 | MS.gene70604:intron | 15.0% |
| !!! | ATTAATTTGATGAGAAATTT+GGG | + | chr3.1:64227778-64227797 | MS.gene70604:intron | 15.0% |
| !!! | GATTGATTATTTTTATAAGA+GGG | - | chr3.1:64230230-64230249 | None:intergenic | 15.0% |
| !!! | TCTTTGTTCTTTTAATATTA+TGG | + | chr3.1:64229090-64229109 | MS.gene70604:intron | 15.0% |
| !!! | TGATATTCTCTTTTTTAAAT+TGG | + | chr3.1:64230014-64230033 | MS.gene70604:intron | 15.0% |
| !!! | TGATTGATTATTTTTATAAG+AGG | - | chr3.1:64230231-64230250 | None:intergenic | 15.0% |
| !!! | TTAATTAAGCATTGATATTA+AGG | + | chr3.1:64227108-64227127 | MS.gene70604:intron | 15.0% |
| !!! | TTTACTGAATACAATTTTTT+TGG | - | chr3.1:64228700-64228719 | None:intergenic | 15.0% |
| !! | AAATTCCTTATTCAAATCTT+TGG | + | chr3.1:64228718-64228737 | MS.gene70604:intron | 20.0% |
| !! | GATTTGAAAAAAGAGAAAAT+TGG | - | chr3.1:64229578-64229597 | None:intergenic | 20.0% |
| !! | GTATAAGAACATTATTTGTT+TGG | + | chr3.1:64226965-64226984 | MS.gene70604:intron | 20.0% |
| !! | TATTTCTTACTTTATGTCAT+TGG | + | chr3.1:64227017-64227036 | MS.gene70604:intron | 20.0% |
| !! | TTGTGAATAAAACAGAAAAA+CGG | - | chr3.1:64229201-64229220 | None:intergenic | 20.0% |
| !!! | AAAAAACTTTTGGTAATTGT+TGG | + | chr3.1:64230317-64230336 | MS.gene70604:intron | 20.0% |
| !!! | AAAAACTTTTGGTAATTGTT+GGG | + | chr3.1:64230318-64230337 | MS.gene70604:intron | 20.0% |
| !!! | AAATATATTTTTTGCAGAGT+CGG | + | chr3.1:64231606-64231625 | MS.gene70604:intron | 20.0% |
| !!! | AATTTTTTTGGTGAATATCA+TGG | - | chr3.1:64228688-64228707 | None:intergenic | 20.0% |
| !!! | AATTTTTTTTTGCCCTTATT+GGG | + | chr3.1:64229651-64229670 | MS.gene70604:intron | 20.0% |
| !!! | AGTTTTAAAAATTACTGGTA+AGG | + | chr3.1:64230276-64230295 | MS.gene70604:intron | 20.0% |
| !!! | ATGATTTTCTTTTCAATTCT+CGG | + | chr3.1:64231117-64231136 | MS.gene70604:CDS | 20.0% |
| !!! | ATGTTTGATTTCATTTTTAG+AGG | - | chr3.1:64227467-64227486 | None:intergenic | 20.0% |
| !!! | ATTCAGGTTGTTTTATTTTT+GGG | + | chr3.1:64227547-64227566 | MS.gene70604:intron | 20.0% |
| !!! | GAAAGTTTTACTTGATTTAT+AGG | - | chr3.1:64230825-64230844 | None:intergenic | 20.0% |
| !!! | GAATGAGTTTTAAAAATTAC+TGG | + | chr3.1:64230271-64230290 | MS.gene70604:intron | 20.0% |
| !!! | TATTCAGGTTGTTTTATTTT+TGG | + | chr3.1:64227546-64227565 | MS.gene70604:intron | 20.0% |
| !!! | TCTAAACAAATATTTTCCAT+CGG | + | chr3.1:64231990-64232009 | MS.gene70604:CDS | 20.0% |
| !!! | TGCAAAAAGAATCTAAAATT+AGG | - | chr3.1:64227044-64227063 | None:intergenic | 20.0% |
| !!! | TGTTTGATTTCATTTTTAGA+GGG | - | chr3.1:64227466-64227485 | None:intergenic | 20.0% |
| !!! | TTAATTTGATGAGAAATTTG+GGG | + | chr3.1:64227779-64227798 | MS.gene70604:intron | 20.0% |
| !!! | TTTAATCCTGAAAAAACTTT+TGG | + | chr3.1:64230307-64230326 | MS.gene70604:intron | 20.0% |
| !!! | TTTAGAACAAAGTTCATATT+AGG | + | chr3.1:64231473-64231492 | MS.gene70604:CDS | 20.0% |
| ! | AAATCAAACTTACATCAGAT+TGG | - | chr3.1:64228758-64228777 | None:intergenic | 25.0% |
| ! | AAATGTTGGCAATTAGTAAA+AGG | - | chr3.1:64231211-64231230 | None:intergenic | 25.0% |
| ! | AATGTTGGCAATTAGTAAAA+GGG | - | chr3.1:64231210-64231229 | None:intergenic | 25.0% |
| ! | ACACAAACTACAAATAATCA+AGG | - | chr3.1:64227680-64227699 | None:intergenic | 25.0% |
| ! | AGAAATTCAAGAAGATAATG+AGG | + | chr3.1:64228455-64228474 | MS.gene70604:intron | 25.0% |
| ! | AGAACATTATTTGTTTGGTT+TGG | + | chr3.1:64226970-64226989 | MS.gene70604:intron | 25.0% |
| ! | ATCAAATAGCTACAAACTTA+AGG | - | chr3.1:64228371-64228390 | None:intergenic | 25.0% |
| ! | ATGTTTGAACAATGTTGTAA+AGG | + | chr3.1:64227610-64227629 | MS.gene70604:intron | 25.0% |
| ! | ATTGGTGAATGAATATAAGT+TGG | - | chr3.1:64229560-64229579 | None:intergenic | 25.0% |
| ! | CTAATCCAAAGATTTGAATA+AGG | - | chr3.1:64228726-64228745 | None:intergenic | 25.0% |
| ! | CTAGATCTAGAAAAAAAACT+GGG | - | chr3.1:64227139-64227158 | None:intergenic | 25.0% |
| ! | CTTACATCATAAGACTAATT+TGG | - | chr3.1:64227187-64227206 | None:intergenic | 25.0% |
| ! | GAAATTCAAGAAGATAATGA+GGG | + | chr3.1:64228456-64228475 | MS.gene70604:intron | 25.0% |
| ! | GAATATTTGGCCAATTTAAA+TGG | + | chr3.1:64227648-64227667 | MS.gene70604:intron | 25.0% |
| ! | GTAATGCAGTAAGAAATATT+TGG | - | chr3.1:64226833-64226852 | None:intergenic | 25.0% |
| ! | GTATCTCATTATTCTTAATC+TGG | + | chr3.1:64226921-64226940 | MS.gene70604:intron | 25.0% |
| ! | TAAAACTAAAAGAGTCTACA+CGG | - | chr3.1:64229400-64229419 | None:intergenic | 25.0% |
| ! | TAACTATACTAAATGATGTG+TGG | + | chr3.1:64228199-64228218 | MS.gene70604:intron | 25.0% |
| ! | TAAGTTTGTAGCTATTTGAT+TGG | + | chr3.1:64228371-64228390 | MS.gene70604:intron | 25.0% |
| ! | TACAAATTTGCACAAATAGT+CGG | - | chr3.1:64228620-64228639 | None:intergenic | 25.0% |
| ! | TAGAAACATTAAAAGACACT+AGG | - | chr3.1:64229040-64229059 | None:intergenic | 25.0% |
| ! | TATATTCTATTCAATTGCCA+GGG | + | chr3.1:64230446-64230465 | MS.gene70604:intron | 25.0% |
| ! | TATCTTCTTGAATTTCTGAA+TGG | - | chr3.1:64228452-64228471 | None:intergenic | 25.0% |
| ! | TCATTAAATTTAACCCTTGA+TGG | + | chr3.1:64229357-64229376 | MS.gene70604:intron | 25.0% |
| ! | TCTAGATCTAGAAAAAAAAC+TGG | - | chr3.1:64227140-64227159 | None:intergenic | 25.0% |
| ! | TGCAAATGATGAATGAAAAT+GGG | - | chr3.1:64231408-64231427 | None:intergenic | 25.0% |
| ! | TTATATTCTATTCAATTGCC+AGG | + | chr3.1:64230445-64230464 | MS.gene70604:intron | 25.0% |
| ! | TTCTCAAGAAAGATTCAATT+GGG | + | chr3.1:64229777-64229796 | MS.gene70604:intron | 25.0% |
| ! | TTGACATGAAATAACAAGAA+TGG | - | chr3.1:64229600-64229619 | None:intergenic | 25.0% |
| ! | TTGGAGACACAATTAAAAAA+TGG | - | chr3.1:64228299-64228318 | None:intergenic | 25.0% |
| ! | TTTCTCAAGAAAGATTCAAT+TGG | + | chr3.1:64229776-64229795 | MS.gene70604:intron | 25.0% |
| !! | AAAATTGATTCTCACATGTT+TGG | - | chr3.1:64227420-64227439 | None:intergenic | 25.0% |
| !! | AAGGAATATGCCATTTAAAT+TGG | - | chr3.1:64227661-64227680 | None:intergenic | 25.0% |
| !! | GTAAATCATAGTCTCTATTT+TGG | - | chr3.1:64228262-64228281 | None:intergenic | 25.0% |
| !! | GTTTCAAGTAGAATCATATT+TGG | + | chr3.1:64227366-64227385 | MS.gene70604:intron | 25.0% |
| !! | TCTTCAATCTTTTCTAATAC+TGG | + | chr3.1:64229716-64229735 | MS.gene70604:intron | 25.0% |
| !! | TTTTGCGTAATTGGAATATT+TGG | + | chr3.1:64227635-64227654 | MS.gene70604:intron | 25.0% |
| !!! | ACTTTGTTCTAAAACTGTTA+AGG | - | chr3.1:64231466-64231485 | None:intergenic | 25.0% |
| !!! | AGTTTGATTTTTTTTTCTGC+AGG | + | chr3.1:64228768-64228787 | MS.gene70604:intron | 25.0% |
| !!! | ATTACATGCTGCTTATTTTA+AGG | - | chr3.1:64231382-64231401 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTTGCCCTTATTG+GGG | + | chr3.1:64229652-64229671 | MS.gene70604:intron | 25.0% |
| !!! | CAATTACCAAAAGTTTTTTC+AGG | - | chr3.1:64230316-64230335 | None:intergenic | 25.0% |
| !!! | GAATTTTTTTTTGCCCTTAT+TGG | + | chr3.1:64229650-64229669 | MS.gene70604:intron | 25.0% |
| !!! | TATTCTGTCTTTGTTTTTTC+CGG | + | chr3.1:64230100-64230119 | MS.gene70604:intron | 25.0% |
| !!! | TCTTTTTTTCTCTTAGATTC+TGG | + | chr3.1:64226877-64226896 | MS.gene70604:intron | 25.0% |
| !!! | TTCAGGTTGTTTTATTTTTG+GGG | + | chr3.1:64227548-64227567 | MS.gene70604:intron | 25.0% |
| !!! | TTTTTTTTCTAGATCTAGAC+TGG | + | chr3.1:64227141-64227160 | MS.gene70604:intron | 25.0% |
| AAAAAAAGAAACTAACGCCA+TGG | - | chr3.1:64226866-64226885 | None:intergenic | 30.0% | |
| AAAACTTAGCCTACACATAA+TGG | + | chr3.1:64230511-64230530 | MS.gene70604:intron | 30.0% | |
| AACCAAAAGTGAGTTATGTT+TGG | + | chr3.1:64227267-64227286 | MS.gene70604:intron | 30.0% | |
| AAGCAGAGTTTCAATTACTT+TGG | - | chr3.1:64228019-64228038 | None:intergenic | 30.0% | |
| AATAGACAAAATGCCATCAA+GGG | - | chr3.1:64229373-64229392 | None:intergenic | 30.0% | |
| AATGAGTATACAGCAATCAA+TGG | + | chr3.1:64231536-64231555 | MS.gene70604:CDS | 30.0% | |
| ACCAAAGTGAATCAATACTA+AGG | - | chr3.1:64227737-64227756 | None:intergenic | 30.0% | |
| AGAATAATTGAGATTGTCGT+TGG | - | chr3.1:64228126-64228145 | None:intergenic | 30.0% | |
| AGACAACACTTTACATAAGA+GGG | + | chr3.1:64231867-64231886 | MS.gene70604:CDS | 30.0% | |
| ATACAGCAATCAATGGTTAT+GGG | + | chr3.1:64231543-64231562 | MS.gene70604:CDS | 30.0% | |
| ATATTCTATTCAATTGCCAG+GGG | + | chr3.1:64230447-64230466 | MS.gene70604:intron | 30.0% | |
| ATCCATGAACTAAAATCACA+AGG | - | chr3.1:64229070-64229089 | None:intergenic | 30.0% | |
| ATGTTGAAATCCAAGAAGTA+TGG | - | chr3.1:64227825-64227844 | None:intergenic | 30.0% | |
| ATGTTGGCAATTAGTAAAAG+GGG | - | chr3.1:64231209-64231228 | None:intergenic | 30.0% | |
| ATTAGGCTTCTCTATATTCT+TGG | + | chr3.1:64231490-64231509 | MS.gene70604:CDS | 30.0% | |
| ATTCTTCTATCTGGATTGTT+TGG | + | chr3.1:64230898-64230917 | MS.gene70604:CDS | 30.0% | |
| CAATGCATAAGAATTGAACT+AGG | + | chr3.1:64231724-64231743 | MS.gene70604:intron | 30.0% | |
| CTGCAAATGATGAATGAAAA+TGG | - | chr3.1:64231409-64231428 | None:intergenic | 30.0% | |
| CTGTTACATAGTTGCTAATT+TGG | + | chr3.1:64230596-64230615 | MS.gene70604:intron | 30.0% | |
| GATAAAAATCTCCCCAATAA+GGG | - | chr3.1:64229666-64229685 | None:intergenic | 30.0% | |
| GTGAATCAATACTAAGGAAA+AGG | - | chr3.1:64227731-64227750 | None:intergenic | 30.0% | |
| GTGTTATGTAACATCACTAA+GGG | + | chr3.1:64227570-64227589 | MS.gene70604:intron | 30.0% | |
| TACCAACATAAGCAAAGAAT+AGG | - | chr3.1:64231306-64231325 | None:intergenic | 30.0% | |
| TAGACAACACTTTACATAAG+AGG | + | chr3.1:64231866-64231885 | MS.gene70604:CDS | 30.0% | |
| TAGTTTCATTGAAATTCAGC+TGG | - | chr3.1:64230206-64230225 | None:intergenic | 30.0% | |
| TATACAGCAATCAATGGTTA+TGG | + | chr3.1:64231542-64231561 | MS.gene70604:CDS | 30.0% | |
| TATCACTGTGTAGGAAAATT+TGG | + | chr3.1:64231232-64231251 | MS.gene70604:intron | 30.0% | |
| TATTCACAATTGCAATTGTG+TGG | + | chr3.1:64229212-64229231 | MS.gene70604:CDS | 30.0% | |
| TCAACTCTTCAAATAGTACT+AGG | + | chr3.1:64228505-64228524 | MS.gene70604:CDS | 30.0% | |
| TCAAGAAAACCAATATCTCA+AGG | - | chr3.1:64229804-64229823 | None:intergenic | 30.0% | |
| TCAAGTAGAATCATATTTGG+AGG | + | chr3.1:64227369-64227388 | MS.gene70604:intron | 30.0% | |
| TGATAAAAATCTCCCCAATA+AGG | - | chr3.1:64229667-64229686 | None:intergenic | 30.0% | |
| TTACATCAGATTGGAACATT+TGG | - | chr3.1:64228749-64228768 | None:intergenic | 30.0% | |
| TTAGGCTTCTCTATATTCTT+GGG | + | chr3.1:64231491-64231510 | MS.gene70604:CDS | 30.0% | |
| TTATGATGTAAGTGTGTGTT+TGG | + | chr3.1:64227195-64227214 | MS.gene70604:intron | 30.0% | |
| TTCATGATACTAAGCTACTA+TGG | - | chr3.1:64230254-64230273 | None:intergenic | 30.0% | |
| ! | AATCAGAAGCTTTTAAATCG+CGG | - | chr3.1:64229443-64229462 | None:intergenic | 30.0% |
| ! | ATATTCTATTTGCTGCTTGT+AGG | + | chr3.1:64227984-64228003 | MS.gene70604:intron | 30.0% |
| ! | ATATTTGGTAGTTGATCCTT+TGG | - | chr3.1:64226818-64226837 | None:intergenic | 30.0% |
| ! | ATCCAAACATAACTCACTTT+TGG | - | chr3.1:64227272-64227291 | None:intergenic | 30.0% |
| ! | ATCTGATTTATGCTTGTTAG+GGG | + | chr3.1:64230869-64230888 | MS.gene70604:intron | 30.0% |
| ! | CAACATTTTCTTGTAATGCT+CGG | + | chr3.1:64227839-64227858 | MS.gene70604:CDS | 30.0% |
| ! | CATCTGATTTATGCTTGTTA+GGG | + | chr3.1:64230868-64230887 | MS.gene70604:intron | 30.0% |
| ! | CATTTTCATTCATCATTTGC+AGG | + | chr3.1:64231407-64231426 | MS.gene70604:intron | 30.0% |
| ! | GTAAAGGAATTTTGCGTAAT+TGG | + | chr3.1:64227626-64227645 | MS.gene70604:intron | 30.0% |
| ! | TTGAACTAGGATTTGTTCTT+TGG | + | chr3.1:64231737-64231756 | MS.gene70604:intron | 30.0% |
| !! | ACAAACTTAAGGTCTTATTG+TGG | - | chr3.1:64228360-64228379 | None:intergenic | 30.0% |
| !! | ACAAATGCTTTTGATTGGAA+TGG | - | chr3.1:64231823-64231842 | None:intergenic | 30.0% |
| !! | AGCAAGTTTTGATATGGAAA+TGG | + | chr3.1:64227923-64227942 | MS.gene70604:intron | 30.0% |
| !! | CAAATGCTTTTGATTGGAAT+GGG | - | chr3.1:64231822-64231841 | None:intergenic | 30.0% |
| !! | TCCTTAGTATTGATTCACTT+TGG | + | chr3.1:64227733-64227752 | MS.gene70604:intron | 30.0% |
| !! | TCTTATGTAAAGTGTTGTCT+AGG | - | chr3.1:64231867-64231886 | None:intergenic | 30.0% |
| !! | TTACACCTCTAGAATCAATT+TGG | + | chr3.1:64227438-64227457 | MS.gene70604:intron | 30.0% |
| !! | TTTTAATTGGGTCCTTATCA+TGG | - | chr3.1:64229475-64229494 | None:intergenic | 30.0% |
| !!! | CTCTTGTATTTTGAGTTTGT+AGG | + | chr3.1:64229880-64229899 | MS.gene70604:intron | 30.0% |
| !!! | GAGATATTGGTTTTCTTGAT+GGG | + | chr3.1:64229805-64229824 | MS.gene70604:intron | 30.0% |
| !!! | TGAGATATTGGTTTTCTTGA+TGG | + | chr3.1:64229804-64229823 | MS.gene70604:intron | 30.0% |
| AAACCAACAAGAGAAACCAA+TGG | - | chr3.1:64228818-64228837 | None:intergenic | 35.0% | |
| AAGCATAAATCAGATGCATG+AGG | - | chr3.1:64230864-64230883 | None:intergenic | 35.0% | |
| AATACCAGCAATATAAGCTC+TGG | - | chr3.1:64228982-64229001 | None:intergenic | 35.0% | |
| AATTTGCACAAATAGTCGGA+AGG | - | chr3.1:64228616-64228635 | None:intergenic | 35.0% | |
| ACAATCTCAATTATTCTCGC+TGG | + | chr3.1:64228129-64228148 | MS.gene70604:CDS | 35.0% | |
| AGTTCCATATCCCTTTCAAT+GGG | + | chr3.1:64229908-64229927 | MS.gene70604:CDS | 35.0% | |
| ATAGTGACACCATTATGTGT+AGG | - | chr3.1:64230523-64230542 | None:intergenic | 35.0% | |
| ATTGCTGGTATTTGTTTCAC+AGG | + | chr3.1:64228990-64229009 | MS.gene70604:CDS | 35.0% | |
| CAACATTTCTATCACTGTGT+AGG | + | chr3.1:64231223-64231242 | MS.gene70604:intron | 35.0% | |
| CAATAGACAAAATGCCATCA+AGG | - | chr3.1:64229374-64229393 | None:intergenic | 35.0% | |
| CTACACAGTGATAGAAATGT+TGG | - | chr3.1:64231225-64231244 | None:intergenic | 35.0% | |
| GACAAGTACAAGTCATTCAA+GGG | + | chr3.1:64231928-64231947 | MS.gene70604:CDS | 35.0% | |
| GAGCTTTCATTGCTGTATAT+AGG | + | chr3.1:64230651-64230670 | MS.gene70604:CDS | 35.0% | |
| GAGGGATTCATCTATTAGAA+AGG | + | chr3.1:64231885-64231904 | MS.gene70604:CDS | 35.0% | |
| GCATCTGATTTATGCTTGTT+AGG | + | chr3.1:64230867-64230886 | MS.gene70604:intron | 35.0% | |
| GCGATTTAAAAGCTTCTGAT+TGG | + | chr3.1:64229442-64229461 | MS.gene70604:intron | 35.0% | |
| GCTATTTGATTGGAACTGTT+AGG | + | chr3.1:64228381-64228400 | MS.gene70604:intron | 35.0% | |
| GTTGCTAAATGTGTAGAGAT+TGG | + | chr3.1:64228952-64228971 | MS.gene70604:CDS | 35.0% | |
| TAAAAGGGGAGAAATGTACT+CGG | - | chr3.1:64231195-64231214 | None:intergenic | 35.0% | |
| TAAGAATAGAAGGTGGCAAT+GGG | - | chr3.1:64230691-64230710 | None:intergenic | 35.0% | |
| TACGTGACAGTTCAATGATA+TGG | + | chr3.1:64231789-64231808 | MS.gene70604:intron | 35.0% | |
| TCAATACTAAGGAAAAGGAG+AGG | - | chr3.1:64227726-64227745 | None:intergenic | 35.0% | |
| TCATCTATTAGAAAGGACAG+AGG | + | chr3.1:64231892-64231911 | MS.gene70604:CDS | 35.0% | |
| TCTATTGTGTTTGTGCTCTA+AGG | - | chr3.1:64229754-64229773 | None:intergenic | 35.0% | |
| TCTTCTGATAAGACCTCAAT+CGG | - | chr3.1:64228177-64228196 | None:intergenic | 35.0% | |
| TGAAATCACACAACTAACCA+AGG | - | chr3.1:64229340-64229359 | None:intergenic | 35.0% | |
| TGCCTATTCTTTGCTTATGT+TGG | + | chr3.1:64231301-64231320 | MS.gene70604:CDS | 35.0% | |
| TGTTGCTGGTATTAACACAT+TGG | + | chr3.1:64228041-64228060 | MS.gene70604:CDS | 35.0% | |
| ! | AGTGTGTGATTGTTTGCTTT+TGG | - | chr3.1:64228318-64228337 | None:intergenic | 35.0% |
| ! | ATCAGAAGCTTTTAAATCGC+GGG | - | chr3.1:64229442-64229461 | None:intergenic | 35.0% |
| ! | CAAATAGTACTAGGCTTTAG+TGG | + | chr3.1:64228514-64228533 | MS.gene70604:CDS | 35.0% |
| ! | GATCTGGTTCATTACTGAAT+CGG | - | chr3.1:64228155-64228174 | None:intergenic | 35.0% |
| ! | GGAGATTTTTATCACTGAAG+TGG | + | chr3.1:64229673-64229692 | MS.gene70604:intron | 35.0% |
| ! | GGATTGTTTGGAACAATTAG+CGG | + | chr3.1:64230910-64230929 | MS.gene70604:CDS | 35.0% |
| ! | GGTGTTATGTAACATCACTA+AGG | + | chr3.1:64227569-64227588 | MS.gene70604:intron | 35.0% |
| ! | TCTGATTTATGCTTGTTAGG+GGG | + | chr3.1:64230870-64230889 | MS.gene70604:intron | 35.0% |
| ! | TGTACGAATTAGGTTTTCCT+GGG | + | chr3.1:64228843-64228862 | MS.gene70604:CDS | 35.0% |
| ! | TTGTACGAATTAGGTTTTCC+TGG | + | chr3.1:64228842-64228861 | MS.gene70604:CDS | 35.0% |
| ! | TTTTATCAGTGCATTGAAGC+TGG | + | chr3.1:64230130-64230149 | MS.gene70604:intron | 35.0% |
| !! | AGGACTAGCAAGTTTTGATA+TGG | + | chr3.1:64227917-64227936 | MS.gene70604:intron | 35.0% |
| !! | ATGGTTGATTCTTTTCCTCA+AGG | + | chr3.1:64230353-64230372 | MS.gene70604:intron | 35.0% |
| !! | CAATCAAAAGCATTTGTTGC+GGG | + | chr3.1:64231826-64231845 | MS.gene70604:CDS | 35.0% |
| !! | CCAATCAAAAGCATTTGTTG+CGG | + | chr3.1:64231825-64231844 | MS.gene70604:CDS | 35.0% |
| !! | GTATACTCATTGAAGTACTG+TGG | - | chr3.1:64231527-64231546 | None:intergenic | 35.0% |
| !! | TGGTTGATTCTTTTCCTCAA+GGG | + | chr3.1:64230354-64230373 | MS.gene70604:intron | 35.0% |
| !!! | GCTGCTTATTTTAAGGATCA+TGG | - | chr3.1:64231375-64231394 | None:intergenic | 35.0% |
| !!! | TCTTTGTTTTTTCCGGAACT+GGG | + | chr3.1:64230107-64230126 | MS.gene70604:intron | 35.0% |
| !!! | TGGTTTCTCTTGTTGGTTTT+GGG | + | chr3.1:64228819-64228838 | MS.gene70604:CDS | 35.0% |
| !!! | TTGGTTTCTCTTGTTGGTTT+TGG | + | chr3.1:64228818-64228837 | MS.gene70604:CDS | 35.0% |
| AAAAGAAACTAACGCCATGG+AGG | - | chr3.1:64226863-64226882 | None:intergenic | 40.0% | |
| AACGAAAGATGCCATCATCA+TGG | - | chr3.1:64229967-64229986 | None:intergenic | 40.0% | |
| AAGAATAGAAGGTGGCAATG+GGG | - | chr3.1:64230690-64230709 | None:intergenic | 40.0% | |
| ACATTGGTGCAAACACTCTT+TGG | + | chr3.1:64228057-64228076 | MS.gene70604:CDS | 40.0% | |
| AGCCTTCGACTACATGTTTA+CGG | + | chr3.1:64228869-64228888 | MS.gene70604:intron | 40.0% | |
| ATACCCCGACTAAGAATAGA+AGG | - | chr3.1:64230701-64230720 | None:intergenic | 40.0% | |
| ATCTTTCGTTGCTCTTGTAG+AGG | + | chr3.1:64229977-64229996 | MS.gene70604:CDS | 40.0% | |
| CAATTGGGTCCTTGAGATAT+TGG | + | chr3.1:64229792-64229811 | MS.gene70604:intron | 40.0% | |
| CGGGATCAAATATACAAGCA+TGG | - | chr3.1:64229423-64229442 | None:intergenic | 40.0% | |
| CTAAGAATAGAAGGTGGCAA+TGG | - | chr3.1:64230692-64230711 | None:intergenic | 40.0% | |
| GAGTTCCATATCCCTTTCAA+TGG | + | chr3.1:64229907-64229926 | MS.gene70604:CDS | 40.0% | |
| GATTACCTGCAGTAATTGGA+GGG | + | chr3.1:64228085-64228104 | MS.gene70604:CDS | 40.0% | |
| GGACAAGTACAAGTCATTCA+AGG | + | chr3.1:64231927-64231946 | MS.gene70604:CDS | 40.0% | |
| GGTCTCACATTCTTACTAAG+TGG | + | chr3.1:64228561-64228580 | MS.gene70604:intron | 40.0% | |
| GTTCCATATCCCTTTCAATG+GGG | + | chr3.1:64229909-64229928 | MS.gene70604:CDS | 40.0% | |
| GTTTCAGTCTTACACAGACA+CGG | - | chr3.1:64230941-64230960 | None:intergenic | 40.0% | |
| TAATGAACCAGATCCGATTG+AGG | + | chr3.1:64228161-64228180 | MS.gene70604:CDS | 40.0% | |
| TACAATGCAGCAATGATTGC+AGG | - | chr3.1:64231280-64231299 | None:intergenic | 40.0% | |
| TATGCTGTTCTACTCACTGT+TGG | + | chr3.1:64229238-64229257 | MS.gene70604:CDS | 40.0% | |
| TCAACATCGATGCTTGTGTT+GGG | + | chr3.1:64228924-64228943 | MS.gene70604:intron | 40.0% | |
| TCACGATTACCTGCAGTAAT+TGG | + | chr3.1:64228081-64228100 | MS.gene70604:CDS | 40.0% | |
| TCTATTCTTAGTCGGGGTAT+TGG | + | chr3.1:64230701-64230720 | MS.gene70604:CDS | 40.0% | |
| TGAAATTCAGCTGGCACAAA+AGG | - | chr3.1:64230197-64230216 | None:intergenic | 40.0% | |
| TGAGATTGTCGTTGGAACAT+AGG | - | chr3.1:64228118-64228137 | None:intergenic | 40.0% | |
| TGCCACCTTCTATTCTTAGT+CGG | + | chr3.1:64230693-64230712 | MS.gene70604:CDS | 40.0% | |
| TGTTGGGCGTTAGTCATAAA+TGG | + | chr3.1:64230334-64230353 | MS.gene70604:intron | 40.0% | |
| TTGATGGGAATCTACGTTCT+AGG | + | chr3.1:64229820-64229839 | MS.gene70604:intron | 40.0% | |
| ! | ATTTATGCTTGTTAGGGGGT+TGG | + | chr3.1:64230874-64230893 | MS.gene70604:intron | 40.0% |
| ! | CCGCAACAAATGCTTTTGAT+TGG | - | chr3.1:64231828-64231847 | None:intergenic | 40.0% |
| ! | GGGATCCAAATTGATTCTAG+AGG | - | chr3.1:64227446-64227465 | None:intergenic | 40.0% |
| ! | GTACGAATTAGGTTTTCCTG+GGG | + | chr3.1:64228844-64228863 | MS.gene70604:CDS | 40.0% |
| ! | TCTTTTTGTACACAGTCCAC+TGG | + | chr3.1:64230629-64230648 | MS.gene70604:intron | 40.0% |
| ! | TGTGGTTCATCTGATTTTGC+TGG | - | chr3.1:64226785-64226804 | None:intergenic | 40.0% |
| ! | TTCTATTTGCTGCTTGTAGG+CGG | + | chr3.1:64227987-64228006 | MS.gene70604:intron | 40.0% |
| ! | TTTGGTAGTTGATCCTTTGG+TGG | - | chr3.1:64226815-64226834 | None:intergenic | 40.0% |
| !! | GTTCCATTGGTTTCTCTTGT+TGG | + | chr3.1:64228812-64228831 | MS.gene70604:CDS | 40.0% |
| !!! | CGCCTTGTGATTTTAGTTCA+TGG | + | chr3.1:64229065-64229084 | MS.gene70604:intron | 40.0% |
| !!! | GAAACTCTGCTTTTTGTTGC+TGG | + | chr3.1:64228027-64228046 | MS.gene70604:CDS | 40.0% |
| !!! | GGTTTTGGGTTGTACGAATT+AGG | + | chr3.1:64228833-64228852 | MS.gene70604:CDS | 40.0% |
| !!! | GTCTTTGTTTTTTCCGGAAC+TGG | + | chr3.1:64230106-64230125 | MS.gene70604:intron | 40.0% |
| AAGATAATGAGGGCAGTCCA+GGG | + | chr3.1:64228466-64228485 | MS.gene70604:CDS | 45.0% | |
| AATGATTGCAGGTGGGATAG+AGG | - | chr3.1:64231269-64231288 | None:intergenic | 45.0% | |
| AATGCAGCAATGATTGCAGG+TGG | - | chr3.1:64231277-64231296 | None:intergenic | 45.0% | |
| AATTGGGTCCTTATCATGGC+AGG | - | chr3.1:64229471-64229490 | None:intergenic | 45.0% | |
| ACCAATGGAACAGCTGAAAG+TGG | - | chr3.1:64228803-64228822 | None:intergenic | 45.0% | |
| ACCTTGCAACATTACGCCAA+AGG | - | chr3.1:64228540-64228559 | None:intergenic | 45.0% | |
| ACTAAGGAAAAGGAGAGGCT+GGG | - | chr3.1:64227721-64227740 | None:intergenic | 45.0% | |
| ACTGCCAGAGCTTATATTGC+TGG | + | chr3.1:64228975-64228994 | MS.gene70604:CDS | 45.0% | |
| ACTGCTCTTGTTCCTCAGAT+GGG | + | chr3.1:64227881-64227900 | MS.gene70604:CDS | 45.0% | |
| AGAGTTGTGCAGATATCTGC+TGG | + | chr3.1:64231090-64231109 | MS.gene70604:CDS | 45.0% | |
| AGATGGGAGGTGGAAATGTA+AGG | + | chr3.1:64227897-64227916 | MS.gene70604:intron | 45.0% | |
| ATCTGAGGAACAAGAGCAGT+GGG | - | chr3.1:64227881-64227900 | None:intergenic | 45.0% | |
| ATGCAGCAATGATTGCAGGT+GGG | - | chr3.1:64231276-64231295 | None:intergenic | 45.0% | |
| ATTGGGTCCTTATCATGGCA+GGG | - | chr3.1:64229470-64229489 | None:intergenic | 45.0% | |
| CACCGTAAACATGTAGTCGA+AGG | - | chr3.1:64228874-64228893 | None:intergenic | 45.0% | |
| CATTCATCATTTGCAGGAGC+TGG | + | chr3.1:64231413-64231432 | MS.gene70604:intron | 45.0% | |
| CCACCTTCTATTCTTAGTCG+GGG | + | chr3.1:64230695-64230714 | MS.gene70604:CDS | 45.0% | |
| CGATTACCTGCAGTAATTGG+AGG | + | chr3.1:64228084-64228103 | MS.gene70604:CDS | 45.0% | |
| CTCAACATCGATGCTTGTGT+TGG | + | chr3.1:64228923-64228942 | MS.gene70604:intron | 45.0% | |
| CTGTTCTACTCACTGTTGGA+GGG | + | chr3.1:64229242-64229261 | MS.gene70604:CDS | 45.0% | |
| CTTCGACTACATGTTTACGG+TGG | + | chr3.1:64228872-64228891 | MS.gene70604:intron | 45.0% | |
| GAAAGGACAGAGGCAAACAT+TGG | + | chr3.1:64231902-64231921 | MS.gene70604:CDS | 45.0% | |
| GACTTATAGATGCTGCTCCT+TGG | + | chr3.1:64229320-64229339 | MS.gene70604:CDS | 45.0% | |
| GATAAGACCTCAATCGGATC+TGG | - | chr3.1:64228171-64228190 | None:intergenic | 45.0% | |
| GCCACCTTCTATTCTTAGTC+GGG | + | chr3.1:64230694-64230713 | MS.gene70604:CDS | 45.0% | |
| TAAGACCCTCCAATTACTGC+AGG | - | chr3.1:64228093-64228112 | None:intergenic | 45.0% | |
| TACAGCAATGAAAGCTCCAG+TGG | - | chr3.1:64230648-64230667 | None:intergenic | 45.0% | |
| TACTAAGGAAAAGGAGAGGC+TGG | - | chr3.1:64227722-64227741 | None:intergenic | 45.0% | |
| TCCACTTTCAGCTGTTCCAT+TGG | + | chr3.1:64228799-64228818 | MS.gene70604:CDS | 45.0% | |
| TGTGCCACATGTGTTGCATT+CGG | + | chr3.1:64229159-64229178 | MS.gene70604:CDS | 45.0% | |
| TGTTCTACTCACTGTTGGAG+GGG | + | chr3.1:64229243-64229262 | MS.gene70604:CDS | 45.0% | |
| TTCTATTCAATTGCCAGGGG+CGG | + | chr3.1:64230450-64230469 | MS.gene70604:intron | 45.0% | |
| TTGGCGTAATGTTGCAAGGT+TGG | + | chr3.1:64228540-64228559 | MS.gene70604:intron | 45.0% | |
| TTTCCCGAATGCAACACATG+TGG | - | chr3.1:64229166-64229185 | None:intergenic | 45.0% | |
| TTTCCCTGCAGAGAAAATGC+TGG | + | chr3.1:64231036-64231055 | MS.gene70604:intron | 45.0% | |
| TTTCGGTGGAGAACCGTTAT+AGG | - | chr3.1:64229269-64229288 | None:intergenic | 45.0% | |
| ! | AGTTGATCCTTTGGTGGATG+TGG | - | chr3.1:64226809-64226828 | None:intergenic | 45.0% |
| ! | GCACTGATAAAACCCAGTTC+CGG | - | chr3.1:64230122-64230141 | None:intergenic | 45.0% |
| ! | TACTAGGCTTTAGTGGCCTT+TGG | + | chr3.1:64228521-64228540 | MS.gene70604:CDS | 45.0% |
| !! | AAGCAACAATAAGAGCACCC+TGG | - | chr3.1:64228486-64228505 | None:intergenic | 45.0% |
| !! | GACTGTTTCTATCTCCCTTG+AGG | - | chr3.1:64230371-64230390 | None:intergenic | 45.0% |
| !! | TTCTTAGTCGGGGTATTGGT+TGG | + | chr3.1:64230705-64230724 | MS.gene70604:CDS | 45.0% |
| !! | AATTAAAAAATATATTATTC+AGG | + | chr3.1:64227531-64227550 | MS.gene70604:intron | 5.0% |
| !!! | TTTTAAATAAGTTTTTAATT+GGG | - | chr3.1:64229487-64229506 | None:intergenic | 5.0% |
| !!! | TTTTTAAATAAGTTTTTAAT+TGG | - | chr3.1:64229488-64229507 | None:intergenic | 5.0% |
| ACACAGGTGGAAGATGGGTA+TGG | + | chr3.1:64231573-64231592 | MS.gene70604:intron | 50.0% | |
| ACATTTCCACCTCCCATCTG+AGG | - | chr3.1:64227896-64227915 | None:intergenic | 50.0% | |
| ACCACAACCACATCCACCAA+AGG | + | chr3.1:64226799-64226818 | MS.gene70604:CDS | 50.0% | |
| ACTGTTGGAGGGGCCTATAA+CGG | + | chr3.1:64229253-64229272 | MS.gene70604:CDS | 50.0% | |
| AGAAACTAACGCCATGGAGG+AGG | - | chr3.1:64226860-64226879 | None:intergenic | 50.0% | |
| AGGACAGAGGCAAACATTGG+TGG | + | chr3.1:64231905-64231924 | MS.gene70604:CDS | 50.0% | |
| AGTCCACACAGGTGGAAGAT+GGG | + | chr3.1:64231568-64231587 | MS.gene70604:CDS | 50.0% | |
| ATACCCATCTTCCACCTGTG+TGG | - | chr3.1:64231574-64231593 | None:intergenic | 50.0% | |
| ATTGGTCCCCTGCCATGATA+AGG | + | chr3.1:64229460-64229479 | MS.gene70604:intron | 50.0% | |
| CAAGGGTGACACAAGAAGTG+AGG | + | chr3.1:64231945-64231964 | MS.gene70604:CDS | 50.0% | |
| CACTGCTCTTGTTCCTCAGA+TGG | + | chr3.1:64227880-64227899 | MS.gene70604:CDS | 50.0% | |
| CATCTGAGGAACAAGAGCAG+TGG | - | chr3.1:64227882-64227901 | None:intergenic | 50.0% | |
| CCCCGACTAAGAATAGAAGG+TGG | - | chr3.1:64230698-64230717 | None:intergenic | 50.0% | |
| GAAGATAATGAGGGCAGTCC+AGG | + | chr3.1:64228465-64228484 | MS.gene70604:CDS | 50.0% | |
| GCATTACTAGTCCTCCTCCA+TGG | + | chr3.1:64226846-64226865 | MS.gene70604:CDS | 50.0% | |
| GCCTTTGGCGTAATGTTGCA+AGG | + | chr3.1:64228536-64228555 | MS.gene70604:CDS | 50.0% | |
| GCTCCCCATTGAAAGGGATA+TGG | - | chr3.1:64229915-64229934 | None:intergenic | 50.0% | |
| GCTGTTCTACTCACTGTTGG+AGG | + | chr3.1:64229241-64229260 | MS.gene70604:CDS | 50.0% | |
| GCTTCGCCTGCATCAAATGT+AGG | - | chr3.1:64229939-64229958 | None:intergenic | 50.0% | |
| GGACAGAGGCAAACATTGGT+GGG | + | chr3.1:64231906-64231925 | MS.gene70604:CDS | 50.0% | |
| GGGAGAAATGTACTCGGATG+TGG | - | chr3.1:64231189-64231208 | None:intergenic | 50.0% | |
| GTAGGTGCTCCCCATTGAAA+GGG | - | chr3.1:64229921-64229940 | None:intergenic | 50.0% | |
| GTGCCACATGTGTTGCATTC+GGG | + | chr3.1:64229160-64229179 | MS.gene70604:CDS | 50.0% | |
| TAAGTCCAGCACGATCAGTG+CGG | - | chr3.1:64229306-64229325 | None:intergenic | 50.0% | |
| TCATCATTTGCAGGAGCTGG+AGG | + | chr3.1:64231416-64231435 | MS.gene70604:intron | 50.0% | |
| TCGATGCTTGTGTTGGGTGT+AGG | + | chr3.1:64228930-64228949 | MS.gene70604:intron | 50.0% | |
| TCTATTCAATTGCCAGGGGC+GGG | + | chr3.1:64230451-64230470 | MS.gene70604:intron | 50.0% | |
| TGTAGGTGCTCCCCATTGAA+AGG | - | chr3.1:64229922-64229941 | None:intergenic | 50.0% | |
| TTGGGTCCTTATCATGGCAG+GGG | - | chr3.1:64229469-64229488 | None:intergenic | 50.0% | |
| ! | AGCATTTGTTGCGGGTGTTG+TGG | + | chr3.1:64231834-64231853 | MS.gene70604:CDS | 50.0% |
| ! | CAGGATGTCTGTGTTTTCGG+TGG | - | chr3.1:64229283-64229302 | None:intergenic | 50.0% |
| ! | CGAAGCGTTTGCCATGATGA+TGG | + | chr3.1:64229953-64229972 | MS.gene70604:CDS | 50.0% |
| ! | CGGCAGGATGTCTGTGTTTT+CGG | - | chr3.1:64229286-64229305 | None:intergenic | 50.0% |
| ! | GGAGCACCTACATTTGATGC+AGG | + | chr3.1:64229930-64229949 | MS.gene70604:CDS | 50.0% |
| ! | GGGGTTGGCATTCTTCTATC+TGG | + | chr3.1:64230889-64230908 | MS.gene70604:CDS | 50.0% |
| ! | TCCTTTGGTGGATGTGGTTG+TGG | - | chr3.1:64226803-64226822 | None:intergenic | 50.0% |
| !! | GGGACATTTTGATGCAGCTG+AGG | + | chr3.1:64227799-64227818 | MS.gene70604:intron | 50.0% |
| CAGTCCACACAGGTGGAAGA+TGG | + | chr3.1:64231567-64231586 | MS.gene70604:CDS | 55.0% | |
| CATCTTCCACCTGTGTGGAC+TGG | - | chr3.1:64231569-64231588 | None:intergenic | 55.0% | |
| CTATTCAATTGCCAGGGGCG+GGG | + | chr3.1:64230452-64230471 | MS.gene70604:intron | 55.0% | |
| CTTGTTCCTCAGATGGGAGG+TGG | + | chr3.1:64227887-64227906 | MS.gene70604:CDS | 55.0% | |
| GCAGCTGAGGCCATACTTCT+TGG | + | chr3.1:64227812-64227831 | MS.gene70604:intron | 55.0% | |
| GCTCTTGTTCCTCAGATGGG+AGG | + | chr3.1:64227884-64227903 | MS.gene70604:CDS | 55.0% | |
| TATTCAATTGCCAGGGGCGG+GGG | + | chr3.1:64230453-64230472 | MS.gene70604:intron | 55.0% | |
| TGTAGTCGAAGGCTTACCCC+AGG | - | chr3.1:64228863-64228882 | None:intergenic | 55.0% | |
| ! | TTGCTGCTTGTAGGCGGAGA+AGG | + | chr3.1:64227993-64228012 | MS.gene70604:intron | 55.0% |
| !! | TAGTCGGGGTATTGGTTGGC+AGG | + | chr3.1:64230709-64230728 | MS.gene70604:CDS | 55.0% |
| GGTTATGGGCCAGTCCACAC+AGG | + | chr3.1:64231557-64231576 | MS.gene70604:CDS | 60.0% | |
| TATGGGCCAGTCCACACAGG+TGG | + | chr3.1:64231560-64231579 | MS.gene70604:CDS | 60.0% | |
| AATTGCCAGGGGCGGGGGAT+TGG | + | chr3.1:64230458-64230477 | MS.gene70604:intron | 65.0% | |
| TCCAGCACGATCAGTGCGGC+AGG | - | chr3.1:64229302-64229321 | None:intergenic | 65.0% | |
| TTTGACCAATCCCCCGCCCC+TGG | - | chr3.1:64230466-64230485 | None:intergenic | 65.0% | |
| ! | TCCTGCCGCACTGATCGTGC+TGG | + | chr3.1:64229298-64229317 | MS.gene70604:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 64226761 | 64232017 | 64226761 | ID=MS.gene70604 |
| chr3.1 | mRNA | 64226761 | 64232017 | 64226761 | ID=MS.gene70604.t1;Parent=MS.gene70604 |
| chr3.1 | exon | 64226761 | 64226869 | 64226761 | ID=MS.gene70604.t1.exon1;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64226761 | 64226869 | 64226761 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| chr3.1 | exon | 64227816 | 64227913 | 64227816 | ID=MS.gene70604.t1.exon2;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64227816 | 64227913 | 64227816 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| chr3.1 | exon | 64228006 | 64228182 | 64228006 | ID=MS.gene70604.t1.exon3;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64228006 | 64228182 | 64228006 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| chr3.1 | exon | 64228457 | 64228557 | 64228457 | ID=MS.gene70604.t1.exon4;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64228457 | 64228557 | 64228457 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| chr3.1 | exon | 64228790 | 64228865 | 64228790 | ID=MS.gene70604.t1.exon5;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64228790 | 64228865 | 64228790 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| chr3.1 | exon | 64228952 | 64229011 | 64228952 | ID=MS.gene70604.t1.exon6;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64228952 | 64229011 | 64228952 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| chr3.1 | exon | 64229157 | 64229341 | 64229157 | ID=MS.gene70604.t1.exon7;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64229157 | 64229341 | 64229157 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| chr3.1 | exon | 64229902 | 64229998 | 64229902 | ID=MS.gene70604.t1.exon8;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64229902 | 64229998 | 64229902 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| chr3.1 | exon | 64230644 | 64230730 | 64230644 | ID=MS.gene70604.t1.exon9;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64230644 | 64230730 | 64230644 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| chr3.1 | exon | 64230889 | 64230947 | 64230889 | ID=MS.gene70604.t1.exon10;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64230889 | 64230947 | 64230889 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| chr3.1 | exon | 64231047 | 64231138 | 64231047 | ID=MS.gene70604.t1.exon11;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64231047 | 64231138 | 64231047 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| chr3.1 | exon | 64231245 | 64231322 | 64231245 | ID=MS.gene70604.t1.exon12;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64231245 | 64231322 | 64231245 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| chr3.1 | exon | 64231429 | 64231589 | 64231429 | ID=MS.gene70604.t1.exon13;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64231429 | 64231589 | 64231429 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| chr3.1 | exon | 64231799 | 64232017 | 64231799 | ID=MS.gene70604.t1.exon14;Parent=MS.gene70604.t1 |
| chr3.1 | CDS | 64231799 | 64232017 | 64231799 | ID=cds.MS.gene70604.t1;Parent=MS.gene70604.t1 |
| Gene Sequence |
| Protein sequence |
