Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43290.t1 | RHN63538.1 | 100 | 532 | 0 | 0 | 1 | 532 | 1 | 532 | 1.70E-305 | 1057.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43290.t1 | Q27GI3 | 85.5 | 532 | 77 | 0 | 1 | 532 | 1 | 532 | 1.8e-271 | 936.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43290.t1 | A0A396IFG0 | 100.0 | 532 | 0 | 0 | 1 | 532 | 1 | 532 | 1.2e-305 | 1057.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene43290 | MS.gene020517 | PPI |
| MS.gene044204 | MS.gene43290 | PPI |
| MS.gene43290 | MS.gene27811 | PPI |
| MS.gene98973 | MS.gene43290 | PPI |
| MS.gene25800 | MS.gene43290 | PPI |
| MS.gene37474 | MS.gene43290 | PPI |
| MS.gene43290 | MS.gene015069 | PPI |
| MS.gene43290 | MS.gene25185 | PPI |
| MS.gene052674 | MS.gene43290 | PPI |
| MS.gene023585 | MS.gene43290 | PPI |
| MS.gene71606 | MS.gene43290 | PPI |
| MS.gene27812 | MS.gene43290 | PPI |
| MS.gene53408 | MS.gene43290 | PPI |
| MS.gene43290 | MS.gene91317 | PPI |
| MS.gene59470 | MS.gene43290 | PPI |
| MS.gene70718 | MS.gene43290 | PPI |
| MS.gene32869 | MS.gene43290 | PPI |
| MS.gene62686 | MS.gene43290 | PPI |
| MS.gene058853 | MS.gene43290 | PPI |
| MS.gene43290 | MS.gene83067 | PPI |
| MS.gene015655 | MS.gene43290 | PPI |
| MS.gene64768 | MS.gene43290 | PPI |
| MS.gene052677 | MS.gene43290 | PPI |
| MS.gene43290 | MS.gene026529 | PPI |
| MS.gene43290 | MS.gene052675 | PPI |
| MS.gene96701 | MS.gene43290 | PPI |
| MS.gene010624 | MS.gene43290 | PPI |
| MS.gene012865 | MS.gene43290 | PPI |
| MS.gene86930 | MS.gene43290 | PPI |
| MS.gene68064 | MS.gene43290 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43290.t1 | MTR_4g106750 | 99.436 | 532 | 3 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1067 |
| MS.gene43290.t1 | MTR_3g078270 | 90.789 | 532 | 49 | 0 | 1 | 532 | 1 | 532 | 0.0 | 991 |
| MS.gene43290.t1 | MTR_4g106750 | 99.379 | 483 | 3 | 0 | 50 | 532 | 1 | 483 | 0.0 | 962 |
| MS.gene43290.t1 | MTR_8g063220 | 81.614 | 533 | 97 | 1 | 1 | 532 | 1 | 533 | 0.0 | 897 |
| MS.gene43290.t1 | MTR_5g035180 | 77.419 | 527 | 118 | 1 | 7 | 532 | 12 | 538 | 0.0 | 849 |
| MS.gene43290.t1 | MTR_4g106750 | 99.189 | 370 | 3 | 0 | 163 | 532 | 11 | 380 | 0.0 | 740 |
| MS.gene43290.t1 | MTR_3g103230 | 59.238 | 525 | 211 | 1 | 8 | 532 | 33 | 554 | 0.0 | 662 |
| MS.gene43290.t1 | MTR_1g106085 | 59.770 | 522 | 207 | 2 | 10 | 531 | 8 | 526 | 0.0 | 637 |
| MS.gene43290.t1 | MTR_8g086520 | 59.073 | 518 | 210 | 1 | 13 | 530 | 7 | 522 | 0.0 | 627 |
| MS.gene43290.t1 | MTR_5g022110 | 57.692 | 520 | 217 | 1 | 13 | 532 | 31 | 547 | 0.0 | 626 |
| MS.gene43290.t1 | MTR_2g016460 | 58.126 | 523 | 216 | 2 | 8 | 530 | 3 | 522 | 0.0 | 620 |
| MS.gene43290.t1 | MTR_3g080390 | 58.252 | 515 | 212 | 2 | 17 | 530 | 6 | 518 | 0.0 | 602 |
| MS.gene43290.t1 | MTR_8g086520 | 58.705 | 448 | 185 | 0 | 13 | 460 | 7 | 454 | 0.0 | 537 |
| MS.gene43290.t1 | MTR_1g021120 | 52.816 | 515 | 237 | 3 | 19 | 531 | 36 | 546 | 0.0 | 531 |
| MS.gene43290.t1 | MTR_8g086520 | 59.158 | 404 | 163 | 1 | 127 | 530 | 5 | 406 | 2.17e-173 | 495 |
| MS.gene43290.t1 | MTR_8g086520 | 58.586 | 396 | 164 | 0 | 13 | 408 | 7 | 402 | 1.47e-165 | 475 |
| MS.gene43290.t1 | MTR_8g068550 | 34.955 | 555 | 316 | 7 | 10 | 529 | 211 | 755 | 4.64e-108 | 340 |
| MS.gene43290.t1 | MTR_5g032020 | 36.100 | 518 | 293 | 4 | 40 | 525 | 182 | 693 | 1.47e-103 | 326 |
| MS.gene43290.t1 | MTR_2g084895 | 34.933 | 521 | 299 | 5 | 43 | 529 | 164 | 678 | 1.48e-94 | 302 |
| MS.gene43290.t1 | MTR_4g055290 | 34.549 | 521 | 296 | 8 | 43 | 529 | 171 | 680 | 4.43e-90 | 291 |
| MS.gene43290.t1 | MTR_2g103510 | 32.308 | 520 | 314 | 6 | 26 | 529 | 94 | 591 | 1.15e-89 | 287 |
| MS.gene43290.t1 | MTR_8g086535 | 65.347 | 101 | 35 | 0 | 308 | 408 | 18 | 118 | 5.01e-36 | 130 |
| MS.gene43290.t1 | MTR_1g079900 | 40.323 | 124 | 57 | 4 | 420 | 530 | 59 | 178 | 2.97e-20 | 89.4 |
| MS.gene43290.t1 | MTR_3g087320 | 53.731 | 67 | 17 | 1 | 461 | 527 | 72 | 124 | 6.00e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43290.t1 | AT5G62890 | 85.526 | 532 | 77 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| MS.gene43290.t1 | AT5G62890 | 85.526 | 532 | 77 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| MS.gene43290.t1 | AT5G62890 | 85.526 | 532 | 77 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| MS.gene43290.t1 | AT5G49990 | 80.798 | 526 | 100 | 1 | 8 | 532 | 3 | 528 | 0.0 | 874 |
| MS.gene43290.t1 | AT5G49990 | 80.798 | 526 | 100 | 1 | 8 | 532 | 3 | 528 | 0.0 | 874 |
| MS.gene43290.t1 | AT5G49990 | 80.798 | 526 | 100 | 1 | 8 | 532 | 3 | 528 | 0.0 | 874 |
| MS.gene43290.t1 | AT5G49990 | 80.798 | 526 | 100 | 1 | 8 | 532 | 3 | 528 | 0.0 | 874 |
| MS.gene43290.t1 | AT1G60030 | 76.091 | 527 | 126 | 0 | 6 | 532 | 12 | 538 | 0.0 | 847 |
| MS.gene43290.t1 | AT5G62890 | 85.435 | 460 | 67 | 0 | 1 | 460 | 1 | 460 | 0.0 | 814 |
| MS.gene43290.t1 | AT1G10540 | 68.216 | 538 | 164 | 3 | 1 | 531 | 1 | 538 | 0.0 | 777 |
| MS.gene43290.t1 | AT1G49960 | 60.496 | 524 | 207 | 0 | 8 | 531 | 2 | 525 | 0.0 | 645 |
| MS.gene43290.t1 | AT2G34190 | 59.846 | 518 | 206 | 1 | 13 | 530 | 7 | 522 | 0.0 | 630 |
| MS.gene43290.t1 | AT1G65550 | 54.064 | 529 | 234 | 2 | 10 | 531 | 14 | 540 | 0.0 | 607 |
| MS.gene43290.t1 | AT2G05760 | 55.922 | 515 | 224 | 2 | 17 | 530 | 6 | 518 | 0.0 | 590 |
| MS.gene43290.t1 | AT1G10540 | 67.268 | 388 | 120 | 3 | 1 | 381 | 1 | 388 | 0.0 | 542 |
| MS.gene43290.t1 | AT2G26510 | 49.516 | 517 | 254 | 3 | 18 | 531 | 36 | 548 | 3.94e-174 | 503 |
| MS.gene43290.t1 | AT5G25420 | 48.533 | 443 | 158 | 5 | 10 | 452 | 26 | 398 | 3.96e-141 | 414 |
| MS.gene43290.t1 | AT2G26510 | 50.954 | 367 | 174 | 2 | 18 | 381 | 36 | 399 | 8.00e-122 | 364 |
| MS.gene43290.t1 | AT2G26510 | 50.282 | 354 | 170 | 2 | 18 | 368 | 36 | 386 | 2.40e-115 | 348 |
| MS.gene43290.t1 | AT4G38050 | 35.249 | 522 | 300 | 5 | 40 | 529 | 189 | 704 | 1.85e-94 | 303 |
| MS.gene43290.t1 | AT2G27810 | 35.509 | 521 | 297 | 5 | 43 | 529 | 186 | 701 | 1.83e-93 | 300 |
| MS.gene43290.t1 | AT2G27810 | 34.312 | 545 | 295 | 7 | 43 | 529 | 186 | 725 | 4.03e-89 | 289 |
| MS.gene43290.t1 | AT2G27810 | 39.259 | 405 | 227 | 3 | 43 | 429 | 186 | 589 | 2.92e-79 | 259 |
| MS.gene43290.t1 | AT2G27810 | 39.665 | 358 | 197 | 3 | 43 | 382 | 186 | 542 | 1.59e-69 | 233 |
Find 148 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACCCTTCAAATAGTATT+AGG | 0.142814 | 8.4:-20513579 | MS.gene43290:CDS |
| CTGTATGAGTTAGGCTTTCC+TGG | 0.181335 | 8.4:-20513205 | MS.gene43290:CDS |
| TTGGTATCTCTTGTTGGTTT+TGG | 0.200317 | 8.4:-20513229 | MS.gene43290:CDS |
| ATTAGGCTTCTCCATCTTCT+TGG | 0.222669 | 8.4:-20509812 | MS.gene43290:CDS |
| CAATCAAAAGCTTTCGTTGC+TGG | 0.262369 | 8.4:-20509496 | MS.gene43290:CDS |
| AACGAGTACACAGCAATAAA+TGG | 0.288001 | 8.4:-20509766 | MS.gene43290:CDS |
| GTACCCCATGTGCTCCATTC+AGG | 0.304871 | 8.4:-20512887 | MS.gene43290:CDS |
| TGTACGTTTAACGTGGTTAT+AGG | 0.312485 | 8.4:+20512781 | None:intergenic |
| GCAGCTGAGGCCATACTTCT+TGG | 0.314540 | 8.4:-20514300 | MS.gene43290:intron |
| CAACCCTTCAAATAGTATTA+GGG | 0.316874 | 8.4:-20513578 | MS.gene43290:CDS |
| TTTAGGACCAAGTTTGTATT+AGG | 0.317423 | 8.4:-20509829 | MS.gene43290:CDS |
| TATTAGGGTTTAGCGGTCTT+TGG | 0.320950 | 8.4:-20513563 | MS.gene43290:CDS |
| TAGTGAAAATGCTGGTCTTT+TGG | 0.321952 | 8.4:-20510549 | MS.gene43290:CDS |
| TTAGGCTTCTCCATCTTCTT+GGG | 0.360098 | 8.4:-20509811 | MS.gene43290:CDS |
| GTTCCTTTGGTATCTCTTGT+TGG | 0.360812 | 8.4:-20513235 | MS.gene43290:CDS |
| ACATTGGTGCAAACGTTGTT+TGG | 0.361228 | 8.4:-20513981 | MS.gene43290:CDS |
| TACACAGCAATAAATGGTTT+TGG | 0.364347 | 8.4:-20509760 | MS.gene43290:CDS |
| CCAACATTATCTTGTGATGC+TGG | 0.375334 | 8.4:-20514274 | MS.gene43290:CDS |
| ATTTATTTAGATTGAAAGGC+AGG | 0.381735 | 8.4:+20509344 | None:intergenic |
| CATCTTGCTCCGGTGTGAAC+TGG | 0.385883 | 8.4:+20509736 | None:intergenic |
| TTACATTGCCACCTCCCATC+TGG | 0.391083 | 8.4:+20514217 | None:intergenic |
| ATAAGAAAGAATCTGCTATT+CGG | 0.396790 | 8.4:-20509441 | MS.gene43290:CDS |
| TTATCAGGATTGTTTGGAAC+TGG | 0.397608 | 8.4:-20510689 | MS.gene43290:CDS |
| TCCACTCTCAGCAGTTCCTT+TGG | 0.398718 | 8.4:-20513248 | MS.gene43290:CDS |
| TGGAGTTGTTGCATATTTCT+TGG | 0.399662 | 8.4:-20509476 | MS.gene43290:CDS |
| GGTTGTGGTTCATCTGCTTT+CGG | 0.406675 | 8.4:+20515497 | None:intergenic |
| TTCTCATACAATACCTCTAT+AGG | 0.410181 | 8.4:+20513864 | None:intergenic |
| TCCATTCTTAGTCGGGGTAT+TGG | 0.410958 | 8.4:-20510852 | MS.gene43290:CDS |
| AGCCGATTGCCCGCAGTAAT+CGG | 0.411159 | 8.4:-20513957 | MS.gene43290:CDS |
| GTTGCTAAGTGTGTAGAGAT+TGG | 0.411415 | 8.4:-20513090 | MS.gene43290:CDS |
| ACCATGGAGCAGCATCTATT+AGG | 0.414783 | 8.4:+20512726 | None:intergenic |
| GGTGTCGGCATTCTGTTATC+AGG | 0.417532 | 8.4:-20510704 | MS.gene43290:CDS |
| ACCACCATCCATTCTTAGTC+GGG | 0.419736 | 8.4:-20510859 | MS.gene43290:CDS |
| ATGTTGGAAACCAAGAAGTA+TGG | 0.422658 | 8.4:+20514290 | None:intergenic |
| ATTCTGTTATCAGGATTGTT+TGG | 0.423854 | 8.4:-20510695 | MS.gene43290:CDS |
| GGTTCATCTGCTTTCGGCGC+CGG | 0.425593 | 8.4:+20515503 | None:intergenic |
| AGCGACAATTAGAGCGCCTT+GGG | 0.426723 | 8.4:+20513602 | None:intergenic |
| TACTTCTCTTGTTCCCCAGA+TGG | 0.427384 | 8.4:-20514232 | MS.gene43290:CDS |
| CAGCCACAAAGAGTAGTGTT+TGG | 0.429045 | 8.4:+20514012 | None:intergenic |
| TATCCAAACACTACTCTTTG+TGG | 0.431001 | 8.4:-20514015 | MS.gene43290:CDS |
| TAAACCCTAATACTATTTGA+AGG | 0.432274 | 8.4:+20513574 | None:intergenic |
| GAAGGGGCACCCCATTGAAA+TGG | 0.438034 | 8.4:+20511913 | None:intergenic |
| GAGTTCCGTATCCATTTCAA+TGG | 0.438469 | 8.4:-20511924 | MS.gene43290:CDS |
| GGATTGTTTGGAACTGGCAT+TGG | 0.442498 | 8.4:-20510683 | MS.gene43290:CDS |
| ACCAATACCCCGACTAAGAA+TGG | 0.448207 | 8.4:+20510851 | None:intergenic |
| TGTATGAGTTAGGCTTTCCT+GGG | 0.448491 | 8.4:-20513204 | MS.gene43290:CDS |
| TGCTTGTTCTTTGCTTATGT+CGG | 0.453106 | 8.4:-20510004 | MS.gene43290:intron |
| TAGTCGGGGTATTGGTTGGC+AGG | 0.453343 | 8.4:-20510844 | MS.gene43290:intron |
| TCCTTCGGTGGATGCGGTTG+TGG | 0.455133 | 8.4:+20515482 | None:intergenic |
| ACCTGCCGCACTGATAGTTC+AGG | 0.456574 | 8.4:-20512749 | MS.gene43290:CDS |
| CTTGTTCCCCAGATGGGAGG+TGG | 0.462178 | 8.4:-20514225 | MS.gene43290:CDS |
| TACATTGCCACCTCCCATCT+GGG | 0.463374 | 8.4:+20514218 | None:intergenic |
| ACTTCTCTTGTTCCCCAGAT+GGG | 0.464390 | 8.4:-20514231 | MS.gene43290:CDS |
| AGTTCCGTATCCATTTCAAT+GGG | 0.464869 | 8.4:-20511923 | MS.gene43290:CDS |
| AGAATGATCGATATTGTTGC+TGG | 0.465220 | 8.4:+20513915 | None:intergenic |
| ACAATATCGATCATTCTTGC+TGG | 0.468221 | 8.4:-20513909 | MS.gene43290:CDS |
| CTCCGATTACTGCGGGCAAT+CGG | 0.469149 | 8.4:+20513955 | None:intergenic |
| TACAATACCTCTATAGGATC+CGG | 0.469817 | 8.4:+20513870 | None:intergenic |
| CAGTATAGTGCAGCGACAAT+GGG | 0.472587 | 8.4:+20510025 | None:intergenic |
| GTTATGCAGTAAGAAACATT+TGG | 0.472916 | 8.4:+20515452 | None:intergenic |
| ATTGCTAGTATTTGTTTCAC+AGG | 0.475975 | 8.4:-20513052 | MS.gene43290:intron |
| CAACATTATCTTGTGATGCT+GGG | 0.482071 | 8.4:-20514273 | MS.gene43290:CDS |
| ACATTTGGAAGCTGATCCTT+CGG | 0.486409 | 8.4:+20515467 | None:intergenic |
| GCCTGAACTATCAGTGCGGC+AGG | 0.490715 | 8.4:+20512748 | None:intergenic |
| GATAGATAAACCCAAGAAGA+TGG | 0.491688 | 8.4:+20509801 | None:intergenic |
| ACTTGGTCCTAAAACTATTG+AGG | 0.494306 | 8.4:+20509839 | None:intergenic |
| TTCTTAGTCGGGGTATTGGT+TGG | 0.497089 | 8.4:-20510848 | MS.gene43290:CDS |
| AATACTAGCAATACAAGCTC+TGG | 0.497265 | 8.4:+20513063 | None:intergenic |
| GCTTCGCCTGCATCAAATGA+AGG | 0.499113 | 8.4:+20511895 | None:intergenic |
| GCAGTATAGTGCAGCGACAA+TGG | 0.501040 | 8.4:+20510024 | None:intergenic |
| AAGCGACAATTAGAGCGCCT+TGG | 0.503518 | 8.4:+20513601 | None:intergenic |
| AATGGCAGGAGGTGGAGCTC+CGG | 0.503871 | 8.4:-20515522 | MS.gene43290:CDS |
| CAAATAGTATTAGGGTTTAG+CGG | 0.510367 | 8.4:-20513570 | MS.gene43290:CDS |
| TAGGAAGAAATGGCAGGAGG+TGG | 0.511282 | 8.4:-20515530 | None:intergenic |
| GGTGCCCCTTCATTTGATGC+AGG | 0.512396 | 8.4:-20511901 | MS.gene43290:CDS |
| TTTCCTTATAGTGAAAATGC+TGG | 0.520510 | 8.4:-20510557 | MS.gene43290:intron |
| TACCACCATCCATTCTTAGT+CGG | 0.522635 | 8.4:-20510860 | MS.gene43290:CDS |
| AGCTGATCCTTCGGTGGATG+CGG | 0.527005 | 8.4:+20515476 | None:intergenic |
| AAGTATTTATTTAGATTGAA+AGG | 0.529186 | 8.4:+20509340 | None:intergenic |
| ATTTGTTACATGCAGTCTAG+TGG | 0.536187 | 8.4:-20510924 | MS.gene43290:intron |
| AGTTCACACCGGAGCAAGAT+GGG | 0.536895 | 8.4:-20509734 | MS.gene43290:intron |
| CAAACACTACTCTTTGTGGC+TGG | 0.539278 | 8.4:-20514011 | MS.gene43290:CDS |
| CTAAGAATGGATGGTGGTAA+TGG | 0.540732 | 8.4:+20510864 | None:intergenic |
| GTCTTTGGCGAAATGTTGCA+AGG | 0.546467 | 8.4:-20513548 | MS.gene43290:intron |
| TGACGAGCCGGATCCTATAG+AGG | 0.546780 | 8.4:-20513877 | MS.gene43290:intron |
| AGCATTGGTGGGATAAGTAC+AGG | 0.547825 | 8.4:-20509405 | MS.gene43290:CDS |
| CAGTTCACACCGGAGCAAGA+TGG | 0.550387 | 8.4:-20509735 | MS.gene43290:CDS |
| AAACCCTAATACTATTTGAA+GGG | 0.555146 | 8.4:+20513575 | None:intergenic |
| GGAGAAGCCTAATACAAACT+TGG | 0.557179 | 8.4:+20509822 | None:intergenic |
| GAAATTTAAGAAGATAATGC+GGG | 0.561073 | 8.4:-20513628 | MS.gene43290:CDS |
| AACAAAGGATGTCATCATCA+TGG | 0.564105 | 8.4:+20511867 | None:intergenic |
| GCCTAATAGATGCTGCTCCA+TGG | 0.564558 | 8.4:-20512727 | MS.gene43290:intron |
| CGATATTGTTGCTGGAACGA+AGG | 0.565616 | 8.4:+20513923 | None:intergenic |
| CCAGCATCACAAGATAATGT+TGG | 0.565678 | 8.4:+20514274 | None:intergenic |
| ATATCATTTGTAGGCTCGGG+AGG | 0.566419 | 8.4:-20509886 | MS.gene43290:intron |
| AAGACAGAGGAAAGCATTGG+TGG | 0.566646 | 8.4:-20509417 | MS.gene43290:CDS |
| AAGATAATGCGGGCAACCCA+AGG | 0.567568 | 8.4:-20513618 | MS.gene43290:CDS |
| ATCCTTTGTTGCTCTAGTAG+AGG | 0.572855 | 8.4:-20511854 | MS.gene43290:intron |
| TAGTGCAGCGACAATGGGAG+GGG | 0.574206 | 8.4:+20510030 | None:intergenic |
| ACCACCTAAGTTACACAGAT+GGG | 0.574576 | 8.4:+20509317 | None:intergenic |
| AGTAACTCACGCCAAGGTGG+AGG | 0.574584 | 8.4:+20515425 | None:intergenic |
| TACAGTTAGGAAGAAATGGC+AGG | 0.575001 | 8.4:-20515536 | None:intergenic |
| AGAGTGGTTCAAATATCCGC+AGG | 0.575012 | 8.4:-20510503 | MS.gene43290:CDS |
| CTTCGCCTGCATCAAATGAA+GGG | 0.577275 | 8.4:+20511896 | None:intergenic |
| TCTCTTGTTCCCCAGATGGG+AGG | 0.578580 | 8.4:-20514228 | MS.gene43290:CDS |
| AACCACCTAAGTTACACAGA+TGG | 0.579661 | 8.4:+20509316 | None:intergenic |
| ACGCGTCGGCAGTCGAAGAG+TGG | 0.586302 | 8.4:-20510519 | MS.gene43290:CDS |
| ATCTGGGGAACAAGAGAAGT+AGG | 0.586891 | 8.4:+20514234 | None:intergenic |
| GCACCCCATTGAAATGGATA+CGG | 0.591804 | 8.4:+20511919 | None:intergenic |
| GAGCCGTACCCATCTTGCTC+CGG | 0.592818 | 8.4:+20509726 | None:intergenic |
| TACCTCTACTAGAGCAACAA+AGG | 0.594784 | 8.4:+20511852 | None:intergenic |
| TGGTCGATTCAATGACGAGC+CGG | 0.595657 | 8.4:-20513889 | MS.gene43290:CDS |
| TTTATTTAGATTGAAAGGCA+GGG | 0.596834 | 8.4:+20509345 | None:intergenic |
| GTGTACTCGTTGAAGTACTG+TGG | 0.597313 | 8.4:+20509778 | None:intergenic |
| ACCAAAGGAACTGCTGAGAG+TGG | 0.597590 | 8.4:+20513247 | None:intergenic |
| TAAGAGCCTCCGATTACTGC+GGG | 0.598802 | 8.4:+20513948 | None:intergenic |
| TATAGTGCAGCGACAATGGG+AGG | 0.601160 | 8.4:+20510028 | None:intergenic |
| ATAGTGCAGCGACAATGGGA+GGG | 0.605016 | 8.4:+20510029 | None:intergenic |
| AGAAATTTAAGAAGATAATG+CGG | 0.606617 | 8.4:-20513629 | MS.gene43290:CDS |
| GGAAAGACAGAGGAAAGCAT+TGG | 0.608090 | 8.4:-20509420 | MS.gene43290:CDS |
| GGATGTCATCATCATGGCAA+AGG | 0.608481 | 8.4:+20511873 | None:intergenic |
| TGTACTCGTTGAAGTACTGT+GGG | 0.612732 | 8.4:+20509779 | None:intergenic |
| TGTTCACGGTTGCAATTGTG+TGG | 0.617824 | 8.4:-20512835 | MS.gene43290:CDS |
| ACCACAACCGCATCCACCGA+AGG | 0.623080 | 8.4:-20515483 | MS.gene43290:CDS |
| TTTCCTGAATGGAGCACATG+GGG | 0.627157 | 8.4:+20512884 | None:intergenic |
| GCATAACAAGTCCTCCACCT+TGG | 0.628357 | 8.4:-20515436 | MS.gene43290:CDS |
| TTCGCCTGCATCAAATGAAG+GGG | 0.629691 | 8.4:+20511897 | None:intergenic |
| TTTGGAAGCTGATCCTTCGG+TGG | 0.629961 | 8.4:+20515470 | None:intergenic |
| AGTGCAGCGACAATGGGAGG+GGG | 0.632519 | 8.4:+20510031 | None:intergenic |
| ATACCCCGACTAAGAATGGA+TGG | 0.633541 | 8.4:+20510855 | None:intergenic |
| AAACCAACAAGAGATACCAA+AGG | 0.636815 | 8.4:+20513232 | None:intergenic |
| CCACCATCCATTCTTAGTCG+GGG | 0.641952 | 8.4:-20510858 | MS.gene43290:CDS |
| AGACAGAGGAAAGCATTGGT+GGG | 0.646989 | 8.4:-20509416 | MS.gene43290:CDS |
| GAGTGGTTCAAATATCCGCA+GGG | 0.654618 | 8.4:-20510502 | MS.gene43290:CDS |
| CGATTGCCCGCAGTAATCGG+AGG | 0.657165 | 8.4:-20513954 | MS.gene43290:CDS |
| TCTGCTATTCGGAAAGACAG+AGG | 0.662986 | 8.4:-20509430 | MS.gene43290:CDS |
| GTATGAGTTAGGCTTTCCTG+GGG | 0.670750 | 8.4:-20513203 | MS.gene43290:intron |
| ACATTGCCACCTCCCATCTG+GGG | 0.672994 | 8.4:+20514219 | None:intergenic |
| TCTGCGTTGTACGTTTAACG+TGG | 0.676085 | 8.4:+20512774 | None:intergenic |
| ATAAGAGCCTCCGATTACTG+CGG | 0.677413 | 8.4:+20513947 | None:intergenic |
| TAAAGTAACTCACGCCAAGG+TGG | 0.696583 | 8.4:+20515422 | None:intergenic |
| TGTGGCTGGAATCAACACAT+TGG | 0.698610 | 8.4:-20513997 | MS.gene43290:CDS |
| AGTTAGGAAGAAATGGCAGG+AGG | 0.712374 | 8.4:-20515533 | None:intergenic |
| AAAGAAAATCATAAACCCTG+CGG | 0.713858 | 8.4:+20510487 | None:intergenic |
| AAGAGAAGTAGGAATTAACA+CGG | 0.724184 | 8.4:+20514245 | None:intergenic |
| CCCCGACTAAGAATGGATGG+TGG | 0.740032 | 8.4:+20510858 | None:intergenic |
| GTTCCGTATCCATTTCAATG+GGG | 0.744828 | 8.4:-20511922 | MS.gene43290:CDS |
| TTAGGCCTGAACTATCAGTG+CGG | 0.794578 | 8.4:+20512744 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAAATAATAATATTTT+TGG | + | chr8.4:20510760-20510779 | None:intergenic | 0.0% |
| !! | AAATCAATAAATTGAAAATA+GGG | + | chr8.4:20510080-20510099 | None:intergenic | 10.0% |
| !! | AATTAAAAATATCCAAATAA+AGG | + | chr8.4:20513025-20513044 | None:intergenic | 10.0% |
| !! | ATTAAATTTGATGTAAAATT+TGG | - | chr8.4:20510513-20510532 | MS.gene43290:CDS | 10.0% |
| !! | TTAAATTTGATGTAAAATTT+GGG | - | chr8.4:20510514-20510533 | MS.gene43290:CDS | 10.0% |
| !!! | ATTTGTTCATTTTTATAAAA+TGG | - | chr8.4:20512523-20512542 | MS.gene43290:intron | 10.0% |
| !!! | ATTTTACATCAAATTTAATA+AGG | + | chr8.4:20510512-20510531 | None:intergenic | 10.0% |
| !!! | TATTATTATTTTTAAACAAG+AGG | - | chr8.4:20510764-20510783 | MS.gene43290:intron | 10.0% |
| !! | AAGTATTTATTTAGATTGAA+AGG | + | chr8.4:20515511-20515530 | None:intergenic | 15.0% |
| !! | GAAATAAGAAGAAAAATAAA+AGG | - | chr8.4:20509705-20509724 | MS.gene43290:intron | 15.0% |
| !! | GAAATCAATAAATTGAAAAT+AGG | + | chr8.4:20510081-20510100 | None:intergenic | 15.0% |
| !! | TAAATTTGATGTAAAATTTG+GGG | - | chr8.4:20510515-20510534 | MS.gene43290:CDS | 15.0% |
| !! | TATCAATATGAAATATTCTA+GGG | + | chr8.4:20514498-20514517 | None:intergenic | 15.0% |
| !! | TTATCAATATGAAATATTCT+AGG | + | chr8.4:20514499-20514518 | None:intergenic | 15.0% |
| !!! | AAAACAAATTTTTTGAAATC+TGG | - | chr8.4:20513297-20513316 | MS.gene43290:intron | 15.0% |
| !!! | AAATAATAATATTTTTGGCT+AGG | + | chr8.4:20510755-20510774 | None:intergenic | 15.0% |
| !!! | AATAATTCAATTTTAATACC+TGG | - | chr8.4:20511724-20511743 | MS.gene43290:intron | 15.0% |
| !!! | ATATTAGTTTCTTATTCATT+GGG | - | chr8.4:20512881-20512900 | MS.gene43290:CDS | 15.0% |
| !!! | CATTTTTATAAAATGGTTAA+AGG | - | chr8.4:20512530-20512549 | MS.gene43290:intron | 15.0% |
| !!! | CTAAATTACTTTTTTAGTTA+TGG | - | chr8.4:20513648-20513667 | MS.gene43290:intron | 15.0% |
| !!! | TAATAAAATAAGTATTGCAT+AGG | + | chr8.4:20513151-20513170 | None:intergenic | 15.0% |
| !!! | TAATTTGTACTACTAAAATT+TGG | - | chr8.4:20513740-20513759 | MS.gene43290:intron | 15.0% |
| !!! | TTTAAGTTTTATGAAGTAAT+CGG | + | chr8.4:20512307-20512326 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTAGAAAAATCTA+GGG | - | chr8.4:20513345-20513364 | MS.gene43290:intron | 15.0% |
| !!! | TTTTTTGTTTAGAAAAATCT+AGG | - | chr8.4:20513344-20513363 | MS.gene43290:intron | 15.0% |
| !! | AAACATTAAAACTATTACAC+TGG | + | chr8.4:20513685-20513704 | None:intergenic | 20.0% |
| !! | AAATTTGATGTAAAATTTGG+GGG | - | chr8.4:20510516-20510535 | MS.gene43290:CDS | 20.0% |
| !! | AATAAGAAACTAATATCTCA+AGG | + | chr8.4:20512877-20512896 | None:intergenic | 20.0% |
| !! | AATTTAAGCCATAGATATAT+TGG | - | chr8.4:20509496-20509515 | MS.gene43290:CDS | 20.0% |
| !! | AGAAATTTAAGAAGATAATG+CGG | - | chr8.4:20511219-20511238 | MS.gene43290:intron | 20.0% |
| !! | ATATTCATAACACGAATAAT+CGG | + | chr8.4:20513839-20513858 | None:intergenic | 20.0% |
| !! | ATGCCCAAAAAATAAAAATA+GGG | + | chr8.4:20511141-20511160 | None:intergenic | 20.0% |
| !! | ATTAGAATAACATACAAGAA+TGG | + | chr8.4:20509660-20509679 | None:intergenic | 20.0% |
| !! | ATTATATAACAACAATGTTG+AGG | - | chr8.4:20510312-20510331 | MS.gene43290:intron | 20.0% |
| !! | CATCTTCTTTAATTAAAGTT+GGG | + | chr8.4:20514234-20514253 | None:intergenic | 20.0% |
| !! | GATAACTTTAATCGATATAA+TGG | - | chr8.4:20513474-20513493 | MS.gene43290:intron | 20.0% |
| !! | TAAATCATCAAAATTCAAGT+TGG | - | chr8.4:20513549-20513568 | MS.gene43290:CDS | 20.0% |
| !! | TATAAAACTTAATTCTAGTG+AGG | + | chr8.4:20513894-20513913 | None:intergenic | 20.0% |
| !! | TATAGAAGTTAATATAGAGT+TGG | + | chr8.4:20514697-20514716 | None:intergenic | 20.0% |
| !! | TATGCCCAAAAAATAAAAAT+AGG | + | chr8.4:20511142-20511161 | None:intergenic | 20.0% |
| !! | TCATCTTCTTTAATTAAAGT+TGG | + | chr8.4:20514235-20514254 | None:intergenic | 20.0% |
| !! | TGCTCATTATTAACTAAAAT+AGG | + | chr8.4:20513120-20513139 | None:intergenic | 20.0% |
| !! | TGTATAAATGCATTTATTTG+TGG | + | chr8.4:20514064-20514083 | None:intergenic | 20.0% |
| !! | TGTCTTCCTAAAATAATTAT+TGG | + | chr8.4:20509872-20509891 | None:intergenic | 20.0% |
| !! | TTATGTCATATTGTTGAATT+TGG | - | chr8.4:20510286-20510305 | MS.gene43290:intron | 20.0% |
| !!! | AAATCATCAAAATTCAAGTT+GGG | - | chr8.4:20513550-20513569 | MS.gene43290:CDS | 20.0% |
| !!! | AATCATTATCATTTTCAAGT+TGG | + | chr8.4:20513522-20513541 | None:intergenic | 20.0% |
| !!! | AATCTTGACTTGTTAAAAAA+TGG | - | chr8.4:20512555-20512574 | MS.gene43290:intron | 20.0% |
| !!! | ATTCTTTTTTTTTGACAAGA+TGG | - | chr8.4:20515156-20515175 | MS.gene43290:intron | 20.0% |
| !!! | ATTTTCATATTAGGGATTTA+GGG | - | chr8.4:20510173-20510192 | MS.gene43290:intron | 20.0% |
| !!! | CATTTTACTGGTTAATTATA+AGG | - | chr8.4:20510245-20510264 | MS.gene43290:intron | 20.0% |
| !!! | GATATTAGTTTCTTATTCAT+TGG | - | chr8.4:20512880-20512899 | MS.gene43290:CDS | 20.0% |
| !!! | GATCCCTATTTTTATTTTTT+GGG | - | chr8.4:20511135-20511154 | MS.gene43290:intron | 20.0% |
| !!! | GTTAGTTATAGTCTTTTATT+AGG | + | chr8.4:20514588-20514607 | None:intergenic | 20.0% |
| !!! | TATTTTCATATTAGGGATTT+AGG | - | chr8.4:20510172-20510191 | MS.gene43290:intron | 20.0% |
| !!! | TATTTTTTCTTTTACTGTGT+AGG | - | chr8.4:20514766-20514785 | MS.gene43290:intron | 20.0% |
| !!! | TCCTAGTTATTTTCATATTA+GGG | - | chr8.4:20510165-20510184 | MS.gene43290:intron | 20.0% |
| !!! | TGCTTGATAATTTTTCTTTT+TGG | - | chr8.4:20509766-20509785 | MS.gene43290:CDS | 20.0% |
| !!! | TTATTTGAAACATAGATACT+GGG | + | chr8.4:20511846-20511865 | None:intergenic | 20.0% |
| !!! | TTCCTAGTTATTTTCATATT+AGG | - | chr8.4:20510164-20510183 | MS.gene43290:intron | 20.0% |
| ! | AAACCCTAATACTATTTGAA+GGG | + | chr8.4:20511276-20511295 | None:intergenic | 25.0% |
| ! | AAATCAGAATAAAAGTAGCA+TGG | + | chr8.4:20510212-20510231 | None:intergenic | 25.0% |
| ! | AAGAATTACAACAATAAGGA+AGG | + | chr8.4:20512796-20512815 | None:intergenic | 25.0% |
| ! | AGAAAGACACTTTAAACAAT+TGG | + | chr8.4:20509572-20509591 | None:intergenic | 25.0% |
| ! | AGGGTATATTAATTTATGGT+TGG | - | chr8.4:20513581-20513600 | MS.gene43290:CDS | 25.0% |
| ! | ATAAGAAAGAATCTGCTATT+CGG | - | chr8.4:20515407-20515426 | MS.gene43290:intron | 25.0% |
| ! | ATTTATTTAGATTGAAAGGC+AGG | + | chr8.4:20515507-20515526 | None:intergenic | 25.0% |
| ! | CAATTTAAATATGCAGCATA+AGG | + | chr8.4:20511675-20511694 | None:intergenic | 25.0% |
| ! | CCTACAAATGATATTAAAAG+TGG | + | chr8.4:20514956-20514975 | None:intergenic | 25.0% |
| ! | CTCTTATGAATATGTTATCA+GGG | - | chr8.4:20513196-20513215 | MS.gene43290:intron | 25.0% |
| ! | GAAAGATATAGAAACATGAA+CGG | + | chr8.4:20511881-20511900 | None:intergenic | 25.0% |
| ! | GAAATTCAATCATCAGAAAT+AGG | + | chr8.4:20511426-20511445 | None:intergenic | 25.0% |
| ! | GAAATTTAAGAAGATAATGC+GGG | - | chr8.4:20511220-20511239 | MS.gene43290:intron | 25.0% |
| ! | GGGTATATTAATTTATGGTT+GGG | - | chr8.4:20513582-20513601 | MS.gene43290:CDS | 25.0% |
| ! | GGTATATTAATTTATGGTTG+GGG | - | chr8.4:20513583-20513602 | MS.gene43290:CDS | 25.0% |
| ! | GTTCAAGAATTACAACAATA+AGG | + | chr8.4:20512800-20512819 | None:intergenic | 25.0% |
| ! | TAAACCCTAATACTATTTGA+AGG | + | chr8.4:20511277-20511296 | None:intergenic | 25.0% |
| ! | TCCCTAATATGAAAATAACT+AGG | + | chr8.4:20510169-20510188 | None:intergenic | 25.0% |
| ! | TTCTAATTCTATACTTAGCA+AGG | - | chr8.4:20509673-20509692 | MS.gene43290:intron | 25.0% |
| ! | TTTAATATCATTTGTAGGCT+CGG | - | chr8.4:20514958-20514977 | MS.gene43290:intron | 25.0% |
| ! | TTTATTTAGATTGAAAGGCA+GGG | + | chr8.4:20515506-20515525 | None:intergenic | 25.0% |
| !! | AAAATAAGTATTGCATAGGA+AGG | + | chr8.4:20513147-20513166 | None:intergenic | 25.0% |
| !! | AAGTAAATCAAAAGCATGAA+TGG | + | chr8.4:20514903-20514922 | None:intergenic | 25.0% |
| !! | ATCGTTTACAAACATTTTAC+TGG | - | chr8.4:20510233-20510252 | MS.gene43290:intron | 25.0% |
| !! | ATGATTTTCTTTTCGATACT+AGG | - | chr8.4:20514372-20514391 | MS.gene43290:intron | 25.0% |
| !! | CTTATTTGAAACATAGATAC+TGG | + | chr8.4:20511847-20511866 | None:intergenic | 25.0% |
| !! | GTCTGACCAATAATTATTTT+AGG | - | chr8.4:20509863-20509882 | MS.gene43290:CDS | 25.0% |
| !! | GTTAGTTATAGTCTTTTATC+AGG | + | chr8.4:20514675-20514694 | None:intergenic | 25.0% |
| !! | TTTATCATGATATTGATGAC+AGG | + | chr8.4:20510406-20510425 | None:intergenic | 25.0% |
| !! | TTTCTATATCTTTCTAGCAT+TGG | - | chr8.4:20511887-20511906 | MS.gene43290:CDS | 25.0% |
| !! | TTTCTTATTCATTGGGATTT+TGG | - | chr8.4:20512888-20512907 | MS.gene43290:CDS | 25.0% |
| !! | TTTTACTGTGTAGGAAAATT+TGG | - | chr8.4:20514775-20514794 | MS.gene43290:intron | 25.0% |
| !!! | AATCATCAAAATTCAAGTTG+GGG | - | chr8.4:20513551-20513570 | MS.gene43290:CDS | 25.0% |
| !!! | ATTATCATTTTCAAGTTGGA+AGG | + | chr8.4:20513518-20513537 | None:intergenic | 25.0% |
| !!! | CCACTTTTAATATCATTTGT+AGG | - | chr8.4:20514953-20514972 | MS.gene43290:intron | 25.0% |
| !!! | GAAAAAATAGTAAGTGTTGA+AGG | + | chr8.4:20514755-20514774 | None:intergenic | 25.0% |
| !!! | GGATCCCTATTTTTATTTTT+TGG | - | chr8.4:20511134-20511153 | MS.gene43290:intron | 25.0% |
| !!! | GTTTTTTAAAAAAGCGTGTT+AGG | + | chr8.4:20512481-20512500 | None:intergenic | 25.0% |
| !!! | TCAATTTTAATACCTGGATT+TGG | - | chr8.4:20511730-20511749 | MS.gene43290:intron | 25.0% |
| !!! | TGGCTTAAATTTTAAGAATC+AGG | + | chr8.4:20509487-20509506 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTCAAATTCTGCT+AGG | + | chr8.4:20512636-20512655 | None:intergenic | 25.0% |
| AAAGAAAATCATAAACCCTG+CGG | + | chr8.4:20514364-20514383 | None:intergenic | 30.0% | |
| AAAGTGCAACTTTAATCAAG+AGG | + | chr8.4:20510729-20510748 | None:intergenic | 30.0% | |
| AACAAAAACAAACACCTTTC+TGG | + | chr8.4:20514273-20514292 | None:intergenic | 30.0% | |
| AAGAATGAAGCAAAAAAAGC+AGG | + | chr8.4:20511189-20511208 | None:intergenic | 30.0% | |
| AAGAGAAGTAGGAATTAACA+CGG | + | chr8.4:20510606-20510625 | None:intergenic | 30.0% | |
| ATATTAATTTATGGTTGGGG+AGG | - | chr8.4:20513586-20513605 | MS.gene43290:CDS | 30.0% | |
| ATCAACTTTGCACAATTCAT+AGG | + | chr8.4:20511018-20511037 | None:intergenic | 30.0% | |
| ATTCTGTTATCAGGATTGTT+TGG | - | chr8.4:20514153-20514172 | MS.gene43290:intron | 30.0% | |
| ATTGCTAGTATTTGTTTCAC+AGG | - | chr8.4:20511796-20511815 | MS.gene43290:intron | 30.0% | |
| CAAATAGTATTAGGGTTTAG+CGG | - | chr8.4:20511278-20511297 | MS.gene43290:intron | 30.0% | |
| CAACCCTTCAAATAGTATTA+GGG | - | chr8.4:20511270-20511289 | MS.gene43290:intron | 30.0% | |
| CAGAATATGACATTAGATTC+TGG | - | chr8.4:20511096-20511115 | MS.gene43290:intron | 30.0% | |
| CATCACTGATGATACTAATA+TGG | + | chr8.4:20512379-20512398 | None:intergenic | 30.0% | |
| GCCATAGATATATTGGAATA+TGG | - | chr8.4:20509503-20509522 | MS.gene43290:CDS | 30.0% | |
| GCCATATTCCAATATATCTA+TGG | + | chr8.4:20509507-20509526 | None:intergenic | 30.0% | |
| GCTCTTATGAATATGTTATC+AGG | - | chr8.4:20513195-20513214 | MS.gene43290:intron | 30.0% | |
| GTAGAGGTAATTCCTTTATT+TGG | - | chr8.4:20513010-20513029 | MS.gene43290:intron | 30.0% | |
| GTTATGCAGTAAGAAACATT+TGG | + | chr8.4:20509399-20509418 | None:intergenic | 30.0% | |
| GTTGTAATTCTACCTACATA+TGG | - | chr8.4:20510135-20510154 | MS.gene43290:intron | 30.0% | |
| TACTATATCATTGAACTGCA+AGG | + | chr8.4:20515320-20515339 | None:intergenic | 30.0% | |
| TAGATCAGTATTCCTCTATT+TGG | + | chr8.4:20513631-20513650 | None:intergenic | 30.0% | |
| TCAAAATCTCTATGATCATG+TGG | + | chr8.4:20514426-20514445 | None:intergenic | 30.0% | |
| TCAACCCTTCAAATAGTATT+AGG | - | chr8.4:20511269-20511288 | MS.gene43290:intron | 30.0% | |
| TCTTTCTATAAACTCTTTCC+TGG | - | chr8.4:20509585-20509604 | MS.gene43290:intron | 30.0% | |
| TTAATATCATTTGTAGGCTC+GGG | - | chr8.4:20514959-20514978 | MS.gene43290:intron | 30.0% | |
| TTCTCATACAATACCTCTAT+AGG | + | chr8.4:20510987-20511006 | None:intergenic | 30.0% | |
| TTGAAAATAGGGCTCAAAAT+TGG | + | chr8.4:20510069-20510088 | None:intergenic | 30.0% | |
| TTTCCTTATAGTGAAAATGC+TGG | - | chr8.4:20514291-20514310 | MS.gene43290:CDS | 30.0% | |
| ! | AAAATGACGCATTTTGTCAT+AGG | - | chr8.4:20512325-20512344 | MS.gene43290:intron | 30.0% |
| ! | AAATGACGCATTTTGTCATA+GGG | - | chr8.4:20512326-20512345 | MS.gene43290:intron | 30.0% |
| ! | AACTTGAGAGTATGATAGAA+AGG | - | chr8.4:20514466-20514485 | MS.gene43290:intron | 30.0% |
| ! | ATGATATTGATGACAGGATA+TGG | + | chr8.4:20510400-20510419 | None:intergenic | 30.0% |
| ! | CATGTACGTTTTATGCATAT+TGG | - | chr8.4:20515267-20515286 | MS.gene43290:intron | 30.0% |
| ! | GGCTGAATTTGTTTCTTAAA+TGG | - | chr8.4:20513427-20513446 | MS.gene43290:intron | 30.0% |
| ! | GTGGAGGGTATATTAATTTA+TGG | - | chr8.4:20513577-20513596 | MS.gene43290:CDS | 30.0% |
| ! | GTTATAGTCTTTTATCAGGT+AGG | + | chr8.4:20514671-20514690 | None:intergenic | 30.0% |
| ! | GTTGACTATTTAGAACTACA+TGG | - | chr8.4:20512166-20512185 | MS.gene43290:intron | 30.0% |
| ! | TACACAGCAATAAATGGTTT+TGG | - | chr8.4:20515088-20515107 | MS.gene43290:intron | 30.0% |
| ! | TATGCTTTTATTCTCACTGT+TGG | - | chr8.4:20512039-20512058 | MS.gene43290:intron | 30.0% |
| ! | TATTTTTCTCAAACTACACC+AGG | + | chr8.4:20509606-20509625 | None:intergenic | 30.0% |
| ! | TGTACATTTTATCTGTGTCA+GGG | - | chr8.4:20514123-20514142 | MS.gene43290:intron | 30.0% |
| ! | TTCTGGTGCTAAATAAATGT+TGG | - | chr8.4:20511113-20511132 | MS.gene43290:intron | 30.0% |
| ! | TTTAGGACCAAGTTTGTATT+AGG | - | chr8.4:20515019-20515038 | MS.gene43290:intron | 30.0% |
| ! | TTTCTTGGTCTTCATATATG+TGG | - | chr8.4:20511355-20511374 | MS.gene43290:intron | 30.0% |
| !! | AAGTACTGATAAAACTTTCC+AGG | + | chr8.4:20513390-20513409 | None:intergenic | 30.0% |
| !! | ACTTTGGTGTTTGTAAAGAA+CGG | - | chr8.4:20513406-20513425 | MS.gene43290:intron | 30.0% |
| !! | ATTTTGTCATAGGGTGTTAT+GGG | - | chr8.4:20512335-20512354 | MS.gene43290:intron | 30.0% |
| !! | GATTTGTTAACAATGGTTGA+TGG | - | chr8.4:20511924-20511943 | MS.gene43290:CDS | 30.0% |
| !! | GGAAAGTTTTATCAGTACTT+TGG | - | chr8.4:20513390-20513409 | MS.gene43290:intron | 30.0% |
| !! | GGAACAAGATTTGTTAACAA+TGG | - | chr8.4:20511917-20511936 | MS.gene43290:CDS | 30.0% |
| !! | TCCTTTTGAACTTCTTGTTT+TGG | - | chr8.4:20510099-20510118 | MS.gene43290:intron | 30.0% |
| !!! | GAGCTTTTATTGCTGTTTAT+CGG | - | chr8.4:20513946-20513965 | MS.gene43290:CDS | 30.0% |
| AAACCAACAAGAGATACCAA+AGG | + | chr8.4:20511619-20511638 | None:intergenic | 35.0% | |
| AACAAAGGATGTCATCATCA+TGG | + | chr8.4:20512984-20513003 | None:intergenic | 35.0% | |
| AACGAGTACACAGCAATAAA+TGG | - | chr8.4:20515082-20515101 | MS.gene43290:intron | 35.0% | |
| AAGCTCTATATATAGAGCCT+GGG | - | chr8.4:20514542-20514561 | MS.gene43290:intron | 35.0% | |
| AAGTTGAGCTTGCATCATTT+GGG | + | chr8.4:20511561-20511580 | None:intergenic | 35.0% | |
| AATAATCAGCCATGATGCTA+AGG | + | chr8.4:20513325-20513344 | None:intergenic | 35.0% | |
| AATACTAGCAATACAAGCTC+TGG | + | chr8.4:20511788-20511807 | None:intergenic | 35.0% | |
| AATCAACCTCTTTCTTTCTC+GGG | - | chr8.4:20510442-20510461 | MS.gene43290:intron | 35.0% | |
| AATTCTTGAACCTTAGAGCA+TGG | - | chr8.4:20512809-20512828 | MS.gene43290:CDS | 35.0% | |
| ACAATATCGATCATTCTTGC+TGG | - | chr8.4:20510939-20510958 | MS.gene43290:intron | 35.0% | |
| ACTTGGTCCTAAAACTATTG+AGG | + | chr8.4:20515012-20515031 | None:intergenic | 35.0% | |
| AGAATGATCGATATTGTTGC+TGG | + | chr8.4:20510936-20510955 | None:intergenic | 35.0% | |
| AGTTCCGTATCCATTTCAAT+GGG | - | chr8.4:20512925-20512944 | MS.gene43290:intron | 35.0% | |
| ATCTTTCTTATGCTCCACTT+TGG | + | chr8.4:20511392-20511411 | None:intergenic | 35.0% | |
| ATGTTGGAAACCAAGAAGTA+TGG | + | chr8.4:20510561-20510580 | None:intergenic | 35.0% | |
| CAACATTATCTTGTGATGCT+GGG | - | chr8.4:20510575-20510594 | MS.gene43290:intron | 35.0% | |
| CCGTGAACAAAACAGAAAAA+CGG | + | chr8.4:20512002-20512021 | None:intergenic | 35.0% | |
| CTTAAATGGCAATTGCAACA+CGG | - | chr8.4:20513441-20513460 | MS.gene43290:intron | 35.0% | |
| GAATCAACCTCTTTCTTTCT+CGG | - | chr8.4:20510441-20510460 | MS.gene43290:intron | 35.0% | |
| GATAGATAAACCCAAGAAGA+TGG | + | chr8.4:20515050-20515069 | None:intergenic | 35.0% | |
| GCCAAAACAAGAAGTTCAAA+AGG | + | chr8.4:20510103-20510122 | None:intergenic | 35.0% | |
| GTAGATATGACTGATACATC+TGG | - | chr8.4:20510477-20510496 | MS.gene43290:CDS | 35.0% | |
| GTGAAGAAAAATTCACTCGA+GGG | - | chr8.4:20513706-20513725 | MS.gene43290:intron | 35.0% | |
| GTTCTTACTTTGCATGTGAT+TGG | - | chr8.4:20510034-20510053 | MS.gene43290:CDS | 35.0% | |
| TAATTGCCGTGTTTGTATGA+AGG | - | chr8.4:20509974-20509993 | MS.gene43290:intron | 35.0% | |
| TACAATACCTCTATAGGATC+CGG | + | chr8.4:20510981-20511000 | None:intergenic | 35.0% | |
| TAGGAAGAGAATCCATATGT+AGG | + | chr8.4:20510150-20510169 | None:intergenic | 35.0% | |
| TATCCAAACACTACTCTTTG+TGG | - | chr8.4:20510833-20510852 | MS.gene43290:intron | 35.0% | |
| TATGCTCTCTGTTCAGATTA+TGG | + | chr8.4:20511060-20511079 | None:intergenic | 35.0% | |
| TCTCATGAATAAGTACGAGT+TGG | + | chr8.4:20514610-20514629 | None:intergenic | 35.0% | |
| TGCTTGTTCTTTGCTTATGT+CGG | - | chr8.4:20514844-20514863 | MS.gene43290:intron | 35.0% | |
| TGGAGTTGTTGCATATTTCT+TGG | - | chr8.4:20515372-20515391 | MS.gene43290:intron | 35.0% | |
| TGTACGTTTAACGTGGTTAT+AGG | + | chr8.4:20512070-20512089 | None:intergenic | 35.0% | |
| TGTGAAGAAAAATTCACTCG+AGG | - | chr8.4:20513705-20513724 | MS.gene43290:intron | 35.0% | |
| TTAAATGGCAATTGCAACAC+GGG | - | chr8.4:20513442-20513461 | MS.gene43290:intron | 35.0% | |
| TTAGTTAGTTAATTTCCCCC+AGG | + | chr8.4:20514562-20514581 | None:intergenic | 35.0% | |
| ! | AGACCAGCATTTTCACTATA+AGG | + | chr8.4:20514297-20514316 | None:intergenic | 35.0% |
| ! | ATTTGTTACATGCAGTCTAG+TGG | - | chr8.4:20513924-20513943 | MS.gene43290:CDS | 35.0% |
| ! | CTGTACATTTTATCTGTGTC+AGG | - | chr8.4:20514122-20514141 | MS.gene43290:intron | 35.0% |
| ! | CTTTTATTCTCACTGTTGGA+GGG | - | chr8.4:20512043-20512062 | MS.gene43290:intron | 35.0% |
| ! | GACAACTGACTTTAGTGAAA+TGG | - | chr8.4:20513262-20513281 | MS.gene43290:intron | 35.0% |
| ! | TCTGCAACCTCAATAGTTTT+AGG | - | chr8.4:20515002-20515021 | MS.gene43290:intron | 35.0% |
| ! | TGGCTGTGTTATTACTTTCT+TGG | - | chr8.4:20511340-20511359 | MS.gene43290:intron | 35.0% |
| ! | TTATCAGGATTGTTTGGAAC+TGG | - | chr8.4:20514159-20514178 | MS.gene43290:intron | 35.0% |
| ! | TTGATGACAGGATATGGTAA+TGG | + | chr8.4:20510394-20510413 | None:intergenic | 35.0% |
| ! | TTTTATTCTCACTGTTGGAG+GGG | - | chr8.4:20512044-20512063 | MS.gene43290:intron | 35.0% |
| !! | AAAATTCAAGTTGGGGATAG+TGG | - | chr8.4:20513558-20513577 | MS.gene43290:CDS | 35.0% |
| !! | ACGAAAGCTTTTGATTGGAA+CGG | + | chr8.4:20515349-20515368 | None:intergenic | 35.0% |
| !! | CATTTTGTCATAGGGTGTTA+TGG | - | chr8.4:20512334-20512353 | MS.gene43290:intron | 35.0% |
| !! | CCGTTTTTCTGTTTTGTTCA+CGG | - | chr8.4:20511999-20512018 | MS.gene43290:intron | 35.0% |
| !! | GATGACATTCTGAGATTAAC+TGG | - | chr8.4:20513793-20513812 | MS.gene43290:intron | 35.0% |
| !! | TTAATACCTGGATTTGGTGT+AGG | - | chr8.4:20511736-20511755 | MS.gene43290:intron | 35.0% |
| !! | TTTTGTCATAGGGTGTTATG+GGG | - | chr8.4:20512336-20512355 | MS.gene43290:intron | 35.0% |
| !!! | CAAGTCCATGTTTTTTTTGC+AGG | - | chr8.4:20510794-20510813 | MS.gene43290:intron | 35.0% |
| !!! | TAGTGAAAATGCTGGTCTTT+TGG | - | chr8.4:20514299-20514318 | MS.gene43290:CDS | 35.0% |
| !!! | TGGTATCTCTTGTTGGTTTT+GGG | - | chr8.4:20511620-20511639 | MS.gene43290:intron | 35.0% |
| !!! | TTGGTATCTCTTGTTGGTTT+TGG | - | chr8.4:20511619-20511638 | MS.gene43290:intron | 35.0% |
| AAGGCTTGTGAATATGACAC+AGG | + | chr8.4:20515236-20515255 | None:intergenic | 40.0% | |
| AATCTGGTACCTTAGCATCA+TGG | - | chr8.4:20513313-20513332 | MS.gene43290:intron | 40.0% | |
| ACAGTAACACTACCATGTGT+CGG | + | chr8.4:20513767-20513786 | None:intergenic | 40.0% | |
| ACATTGGTGCAAACGTTGTT+TGG | - | chr8.4:20510867-20510886 | MS.gene43290:CDS | 40.0% | |
| ACATTTGGAAGCTGATCCTT+CGG | + | chr8.4:20509384-20509403 | None:intergenic | 40.0% | |
| ACTCATGACTTAATCGCTGA+AGG | + | chr8.4:20509744-20509763 | None:intergenic | 40.0% | |
| AGCTCTATATATAGAGCCTG+GGG | - | chr8.4:20514543-20514562 | MS.gene43290:intron | 40.0% | |
| AGGCTTGTGAATATGACACA+GGG | + | chr8.4:20515235-20515254 | None:intergenic | 40.0% | |
| AGTCACACTTCACTTATCTC+CGG | + | chr8.4:20509925-20509944 | None:intergenic | 40.0% | |
| ATCCTTTGTTGCTCTAGTAG+AGG | - | chr8.4:20512994-20513013 | MS.gene43290:intron | 40.0% | |
| ATGAAATCCACAACTCACCA+TGG | + | chr8.4:20512141-20512160 | None:intergenic | 40.0% | |
| ATGTAAAGTAACTCACGCCA+AGG | + | chr8.4:20509432-20509451 | None:intergenic | 40.0% | |
| ATTAGGCTTCTCCATCTTCT+TGG | - | chr8.4:20515036-20515055 | MS.gene43290:intron | 40.0% | |
| CAAGCTCAACTTCTTTCTTC+AGG | - | chr8.4:20511569-20511588 | MS.gene43290:intron | 40.0% | |
| CAATCAAAAGCTTTCGTTGC+TGG | - | chr8.4:20515352-20515371 | MS.gene43290:intron | 40.0% | |
| CAATTTGCAATCGAGAATGC+TGG | - | chr8.4:20512746-20512765 | MS.gene43290:CDS | 40.0% | |
| CCAACATTATCTTGTGATGC+TGG | - | chr8.4:20510574-20510593 | MS.gene43290:intron | 40.0% | |
| CCAAGTCCTTCATACAAACA+CGG | + | chr8.4:20509983-20510002 | None:intergenic | 40.0% | |
| CCAGCATCACAAGATAATGT+TGG | + | chr8.4:20510577-20510596 | None:intergenic | 40.0% | |
| CGTACATGACAAGAAACTCA+AGG | + | chr8.4:20515255-20515274 | None:intergenic | 40.0% | |
| CTCCTCCTGCAAAAAAAACA+TGG | + | chr8.4:20510802-20510821 | None:intergenic | 40.0% | |
| CTTTGCATGTGATTGGAAGT+TGG | - | chr8.4:20510041-20510060 | MS.gene43290:CDS | 40.0% | |
| GAAGCTCTATATATAGAGCC+TGG | - | chr8.4:20514541-20514560 | MS.gene43290:intron | 40.0% | |
| GAAGTTGAGCTTGCATCATT+TGG | + | chr8.4:20511562-20511581 | None:intergenic | 40.0% | |
| GAGTTCCGTATCCATTTCAA+TGG | - | chr8.4:20512924-20512943 | MS.gene43290:intron | 40.0% | |
| GCTTCCTTTCCTAAGTGAAA+TGG | - | chr8.4:20509797-20509816 | MS.gene43290:CDS | 40.0% | |
| GGAGAAGCCTAATACAAACT+TGG | + | chr8.4:20515029-20515048 | None:intergenic | 40.0% | |
| GTAGTTAGTTAATTTCCCCC+AGG | + | chr8.4:20514649-20514668 | None:intergenic | 40.0% | |
| GTATCATCAGTGATGCTTTG+TGG | - | chr8.4:20512384-20512403 | MS.gene43290:intron | 40.0% | |
| GTTCCGTATCCATTTCAATG+GGG | - | chr8.4:20512926-20512945 | MS.gene43290:intron | 40.0% | |
| GTTCCTTTGGTATCTCTTGT+TGG | - | chr8.4:20511613-20511632 | MS.gene43290:intron | 40.0% | |
| GTTGCTAAGTGTGTAGAGAT+TGG | - | chr8.4:20511758-20511777 | MS.gene43290:intron | 40.0% | |
| TACCACCATCCATTCTTAGT+CGG | - | chr8.4:20513988-20514007 | MS.gene43290:CDS | 40.0% | |
| TACCTCTACTAGAGCAACAA+AGG | + | chr8.4:20512999-20513018 | None:intergenic | 40.0% | |
| TATTAGGGTTTAGCGGTCTT+TGG | - | chr8.4:20511285-20511304 | MS.gene43290:intron | 40.0% | |
| TCTATACTTAGCAAGGCATG+TGG | - | chr8.4:20509680-20509699 | MS.gene43290:intron | 40.0% | |
| TGCTTTGTGGAGTTGAGAAT+TGG | - | chr8.4:20512397-20512416 | MS.gene43290:intron | 40.0% | |
| TGTATGAGTTAGGCTTTCCT+GGG | - | chr8.4:20511644-20511663 | MS.gene43290:intron | 40.0% | |
| TTAGGCTTCTCCATCTTCTT+GGG | - | chr8.4:20515037-20515056 | MS.gene43290:intron | 40.0% | |
| TTGAAGGAAAGATGCGTACT+TGG | + | chr8.4:20514739-20514758 | None:intergenic | 40.0% | |
| ! | AAAAATCTAGGGCTGAAGTC+AGG | - | chr8.4:20513356-20513375 | MS.gene43290:intron | 40.0% |
| ! | CAGCAACGAAAGCTTTTGAT+TGG | + | chr8.4:20515354-20515373 | None:intergenic | 40.0% |
| ! | CATTGGGATTTTGGATTTGC+AGG | - | chr8.4:20512897-20512916 | MS.gene43290:intron | 40.0% |
| ! | CGAAGACATGTTTTCCTGAA+TGG | + | chr8.4:20511978-20511997 | None:intergenic | 40.0% |
| ! | CTAAGAATGGATGGTGGTAA+TGG | + | chr8.4:20513987-20514006 | None:intergenic | 40.0% |
| ! | GCTTTTATTCTCACTGTTGG+AGG | - | chr8.4:20512042-20512061 | MS.gene43290:intron | 40.0% |
| ! | TCAAAAGCATGAATGGCTTG+TGG | + | chr8.4:20514896-20514915 | None:intergenic | 40.0% |
| ! | TGTATGAAGGACTTGGTTTC+TGG | - | chr8.4:20509987-20510006 | MS.gene43290:intron | 40.0% |
| ! | TTTGTCATAGGGTGTTATGG+GGG | - | chr8.4:20512337-20512356 | MS.gene43290:intron | 40.0% |
| ! | TTTTATCTGTGTCAGGGTGT+CGG | - | chr8.4:20514129-20514148 | MS.gene43290:intron | 40.0% |
| ! | TTTTCCTGAATGGAGCACAT+GGG | + | chr8.4:20511968-20511987 | None:intergenic | 40.0% |
| !! | AGGTTGGTCTCAAGTTTAAG+TGG | - | chr8.4:20511320-20511339 | MS.gene43290:intron | 40.0% |
| !! | CTTTCTAGCATTGGTTTCTG+TGG | - | chr8.4:20511896-20511915 | MS.gene43290:CDS | 40.0% |
| !! | TGAAATGGCGCTGGTTAATT+TGG | - | chr8.4:20509812-20509831 | MS.gene43290:CDS | 40.0% |
| !! | TGTACTCGTTGAAGTACTGT+GGG | + | chr8.4:20515072-20515091 | None:intergenic | 40.0% |
| !!! | GTCCATGTTTTTTTTGCAGG+AGG | - | chr8.4:20510797-20510816 | MS.gene43290:intron | 40.0% |
| !!! | TGAAGTCAGGTTTTTAGTCC+TGG | - | chr8.4:20513369-20513388 | MS.gene43290:intron | 40.0% |
| AATATGACACAGGGCACATG+GGG | + | chr8.4:20515226-20515245 | None:intergenic | 45.0% | |
| ACACCTGACTGATACTTGAC+CGG | - | chr8.4:20509903-20509922 | MS.gene43290:intron | 45.0% | |
| ACCAATACCCCGACTAAGAA+TGG | + | chr8.4:20514000-20514019 | None:intergenic | 45.0% | |
| ACCACCATCCATTCTTAGTC+GGG | - | chr8.4:20513989-20514008 | MS.gene43290:CDS | 45.0% | |
| ACCATGGAGCAGCATCTATT+AGG | + | chr8.4:20512125-20512144 | None:intergenic | 45.0% | |
| ACTTCTCTTGTTCCCCAGAT+GGG | - | chr8.4:20510617-20510636 | MS.gene43290:intron | 45.0% | |
| AGAGTGGTTCAAATATCCGC+AGG | - | chr8.4:20514345-20514364 | MS.gene43290:intron | 45.0% | |
| AGCGCCATTTCACTTAGGAA+AGG | + | chr8.4:20509804-20509823 | None:intergenic | 45.0% | |
| AGTGAGTGCACCACAACTTA+AGG | + | chr8.4:20512234-20512253 | None:intergenic | 45.0% | |
| ATAAGAGCCTCCGATTACTG+CGG | + | chr8.4:20510904-20510923 | None:intergenic | 45.0% | |
| ATACCCCGACTAAGAATGGA+TGG | + | chr8.4:20513996-20514015 | None:intergenic | 45.0% | |
| ATACTTAGCAAGGCATGTGG+AGG | - | chr8.4:20509683-20509702 | MS.gene43290:intron | 45.0% | |
| ATATCATTTGTAGGCTCGGG+AGG | - | chr8.4:20514962-20514981 | MS.gene43290:intron | 45.0% | |
| ATCTGGGGAACAAGAGAAGT+AGG | + | chr8.4:20510617-20510636 | None:intergenic | 45.0% | |
| CAAACACTACTCTTTGTGGC+TGG | - | chr8.4:20510837-20510856 | MS.gene43290:intron | 45.0% | |
| CACCACAACTTAAGGACACT+GGG | + | chr8.4:20512226-20512245 | None:intergenic | 45.0% | |
| CAGCCACAAAGAGTAGTGTT+TGG | + | chr8.4:20510839-20510858 | None:intergenic | 45.0% | |
| CAGTAACACTACCATGTGTC+GGG | + | chr8.4:20513766-20513785 | None:intergenic | 45.0% | |
| CAGTATAGTGCAGCGACAAT+GGG | + | chr8.4:20514826-20514845 | None:intergenic | 45.0% | |
| CCGTGTTTGTATGAAGGACT+TGG | - | chr8.4:20509980-20509999 | MS.gene43290:intron | 45.0% | |
| CGATATTGTTGCTGGAACGA+AGG | + | chr8.4:20510928-20510947 | None:intergenic | 45.0% | |
| CTAAAATTTGGCCCGACACA+TGG | - | chr8.4:20513752-20513771 | MS.gene43290:intron | 45.0% | |
| CTAGATCCCGAGAAAGAAAG+AGG | + | chr8.4:20510451-20510470 | None:intergenic | 45.0% | |
| CTCTTTCTTTCTCGGGATCT+AGG | - | chr8.4:20510449-20510468 | MS.gene43290:intron | 45.0% | |
| CTGTATGAGTTAGGCTTTCC+TGG | - | chr8.4:20511643-20511662 | MS.gene43290:intron | 45.0% | |
| CTTCGCCTGCATCAAATGAA+GGG | + | chr8.4:20512955-20512974 | None:intergenic | 45.0% | |
| GAATATGACACAGGGCACAT+GGG | + | chr8.4:20515227-20515246 | None:intergenic | 45.0% | |
| GAGTGGTTCAAATATCCGCA+GGG | - | chr8.4:20514346-20514365 | MS.gene43290:intron | 45.0% | |
| GCACCCCATTGAAATGGATA+CGG | + | chr8.4:20512932-20512951 | None:intergenic | 45.0% | |
| GCTCTATATATAGAGCCTGG+GGG | - | chr8.4:20514544-20514563 | MS.gene43290:intron | 45.0% | |
| GCTCTCTGTTCAGATTATGG+CGG | + | chr8.4:20511057-20511076 | None:intergenic | 45.0% | |
| GGATGTCATCATCATGGCAA+AGG | + | chr8.4:20512978-20512997 | None:intergenic | 45.0% | |
| GGTTGTGGTTCATCTGCTTT+CGG | + | chr8.4:20509354-20509373 | None:intergenic | 45.0% | |
| GTATGAGTTAGGCTTTCCTG+GGG | - | chr8.4:20511645-20511664 | MS.gene43290:intron | 45.0% | |
| GTCTTTGGCGAAATGTTGCA+AGG | - | chr8.4:20511300-20511319 | MS.gene43290:intron | 45.0% | |
| TAAAGTAACTCACGCCAAGG+TGG | + | chr8.4:20509429-20509448 | None:intergenic | 45.0% | |
| TAACCAGCGCCATTTCACTT+AGG | + | chr8.4:20509809-20509828 | None:intergenic | 45.0% | |
| TACTTCTCTTGTTCCCCAGA+TGG | - | chr8.4:20510616-20510635 | MS.gene43290:intron | 45.0% | |
| TAGCAACCTACACCAAATCC+AGG | + | chr8.4:20511745-20511764 | None:intergenic | 45.0% | |
| TCCATTCTTAGTCGGGGTAT+TGG | - | chr8.4:20513996-20514015 | MS.gene43290:CDS | 45.0% | |
| TCTGCGTTGTACGTTTAACG+TGG | + | chr8.4:20512077-20512096 | None:intergenic | 45.0% | |
| TCTGCTATTCGGAAAGACAG+AGG | - | chr8.4:20515418-20515437 | MS.gene43290:intron | 45.0% | |
| TCTGTTGTGTCCATGCTCTA+AGG | + | chr8.4:20512822-20512841 | None:intergenic | 45.0% | |
| TGAATATGACACAGGGCACA+TGG | + | chr8.4:20515228-20515247 | None:intergenic | 45.0% | |
| TGCATTGCAGCAAGACATCT+AGG | - | chr8.4:20513219-20513238 | MS.gene43290:CDS | 45.0% | |
| TGTGGCTGGAATCAACACAT+TGG | - | chr8.4:20510851-20510870 | MS.gene43290:CDS | 45.0% | |
| TGTTCACGGTTGCAATTGTG+TGG | - | chr8.4:20512013-20512032 | MS.gene43290:intron | 45.0% | |
| TTAGGCCTGAACTATCAGTG+CGG | + | chr8.4:20512107-20512126 | None:intergenic | 45.0% | |
| TTCGCCTGCATCAAATGAAG+GGG | + | chr8.4:20512954-20512973 | None:intergenic | 45.0% | |
| TTGGCGAAATGTTGCAAGGT+TGG | - | chr8.4:20511304-20511323 | MS.gene43290:intron | 45.0% | |
| TTTCCTAAGTGAAATGGCGC+TGG | - | chr8.4:20509803-20509822 | MS.gene43290:CDS | 45.0% | |
| TTTCCTGAATGGAGCACATG+GGG | + | chr8.4:20511967-20511986 | None:intergenic | 45.0% | |
| ! | AACCCAGTGTCCTTAAGTTG+TGG | - | chr8.4:20512221-20512240 | MS.gene43290:intron | 45.0% |
| ! | GGAAAGACAGAGGAAAGCAT+TGG | - | chr8.4:20515428-20515447 | MS.gene43290:intron | 45.0% |
| ! | GGATTGTTTGGAACTGGCAT+TGG | - | chr8.4:20514165-20514184 | MS.gene43290:intron | 45.0% |
| ! | GTTTTCCTGAATGGAGCACA+TGG | + | chr8.4:20511969-20511988 | None:intergenic | 45.0% |
| ! | TGCAGTCGACAGCTTTTGAT+TGG | - | chr8.4:20510338-20510357 | MS.gene43290:intron | 45.0% |
| !! | AAGACAGAGGAAAGCATTGG+TGG | - | chr8.4:20515431-20515450 | MS.gene43290:intron | 45.0% |
| !! | ACACCTTTCTGGAGTCAACA+AGG | + | chr8.4:20514262-20514281 | None:intergenic | 45.0% |
| !! | AGACAGAGGAAAGCATTGGT+GGG | - | chr8.4:20515432-20515451 | MS.gene43290:intron | 45.0% |
| !! | AGCATTGGTGGGATAAGTAC+AGG | - | chr8.4:20515443-20515462 | MS.gene43290:CDS | 45.0% |
| !! | AGCGTGTTAGGAGCATTTCT+CGG | + | chr8.4:20512469-20512488 | None:intergenic | 45.0% |
| !! | ATTCAAGTTGGGGATAGTGG+AGG | - | chr8.4:20513561-20513580 | MS.gene43290:CDS | 45.0% |
| !! | CATCCTTGTTGACTCCAGAA+AGG | - | chr8.4:20514256-20514275 | MS.gene43290:CDS | 45.0% |
| !! | GTGTACTCGTTGAAGTACTG+TGG | + | chr8.4:20515073-20515092 | None:intergenic | 45.0% |
| !! | TTCAAGTTGGGGATAGTGGA+GGG | - | chr8.4:20513562-20513581 | MS.gene43290:CDS | 45.0% |
| !! | TTCTTAGTCGGGGTATTGGT+TGG | - | chr8.4:20514000-20514019 | MS.gene43290:CDS | 45.0% |
| !!! | GGTTTTGGGCTGTATGAGTT+AGG | - | chr8.4:20511634-20511653 | MS.gene43290:intron | 45.0% |
| !! | AAATTAAATTAATATTCTTA+AGG | - | chr8.4:20510662-20510681 | MS.gene43290:intron | 5.0% |
| AAGATAATGCGGGCAACCCA+AGG | - | chr8.4:20511230-20511249 | MS.gene43290:intron | 50.0% | |
| ACCAAAGGAACTGCTGAGAG+TGG | + | chr8.4:20511604-20511623 | None:intergenic | 50.0% | |
| AGTTCACACCGGAGCAAGAT+GGG | - | chr8.4:20515114-20515133 | MS.gene43290:intron | 50.0% | |
| ATAGTGCAGCGACAATGGGA+GGG | + | chr8.4:20514822-20514841 | None:intergenic | 50.0% | |
| CCACCATCCATTCTTAGTCG+GGG | - | chr8.4:20513990-20514009 | MS.gene43290:CDS | 50.0% | |
| GCACCACAACTTAAGGACAC+TGG | + | chr8.4:20512227-20512246 | None:intergenic | 50.0% | |
| GCAGTATAGTGCAGCGACAA+TGG | + | chr8.4:20514827-20514846 | None:intergenic | 50.0% | |
| GCATAACAAGTCCTCCACCT+TGG | - | chr8.4:20509412-20509431 | MS.gene43290:CDS | 50.0% | |
| GCCTAATAGATGCTGCTCCA+TGG | - | chr8.4:20512121-20512140 | MS.gene43290:intron | 50.0% | |
| GCTTCGCCTGCATCAAATGA+AGG | + | chr8.4:20512956-20512975 | None:intergenic | 50.0% | |
| TAAGAGCCTCCGATTACTGC+GGG | + | chr8.4:20510903-20510922 | None:intergenic | 50.0% | |
| TACATTGCCACCTCCCATCT+GGG | + | chr8.4:20510633-20510652 | None:intergenic | 50.0% | |
| TATAGTGCAGCGACAATGGG+AGG | + | chr8.4:20514823-20514842 | None:intergenic | 50.0% | |
| TCCACTCTCAGCAGTTCCTT+TGG | - | chr8.4:20511600-20511619 | MS.gene43290:intron | 50.0% | |
| TCTCCGGTCAAGTATCAGTC+AGG | + | chr8.4:20509909-20509928 | None:intergenic | 50.0% | |
| TGGCTTGAACGTGTCCAAAG+TGG | - | chr8.4:20511375-20511394 | MS.gene43290:intron | 50.0% | |
| TTACATTGCCACCTCCCATC+TGG | + | chr8.4:20510634-20510653 | None:intergenic | 50.0% | |
| TTTGGAAGCTGATCCTTCGG+TGG | + | chr8.4:20509381-20509400 | None:intergenic | 50.0% | |
| ! | AAGCGACAATTAGAGCGCCT+TGG | + | chr8.4:20511250-20511269 | None:intergenic | 50.0% |
| ! | AGCGACAATTAGAGCGCCTT+GGG | + | chr8.4:20511249-20511268 | None:intergenic | 50.0% |
| ! | TGGTCGATTCAATGACGAGC+CGG | - | chr8.4:20510959-20510978 | MS.gene43290:intron | 50.0% |
| !! | GCGCTGGTTAATTTGGACTC+TGG | - | chr8.4:20509819-20509838 | MS.gene43290:CDS | 50.0% |
| !! | GGTGTCGGCATTCTGTTATC+AGG | - | chr8.4:20514144-20514163 | MS.gene43290:intron | 50.0% |
| !! | GGTTTTGGTCCAGTTCACAC+CGG | - | chr8.4:20515103-20515122 | MS.gene43290:intron | 50.0% |
| !!! | CTTTTGGCTTTGACACGCGT+CGG | - | chr8.4:20514315-20514334 | MS.gene43290:intron | 50.0% |
| ACACCGGAGCAAGATGGGTA+CGG | - | chr8.4:20515119-20515138 | MS.gene43290:intron | 55.0% | |
| ACATTGCCACCTCCCATCTG+GGG | + | chr8.4:20510632-20510651 | None:intergenic | 55.0% | |
| AGCCGATTGCCCGCAGTAAT+CGG | - | chr8.4:20510891-20510910 | MS.gene43290:CDS | 55.0% | |
| AGCTGATCCTTCGGTGGATG+CGG | + | chr8.4:20509375-20509394 | None:intergenic | 55.0% | |
| AGTAACTCACGCCAAGGTGG+AGG | + | chr8.4:20509426-20509445 | None:intergenic | 55.0% | |
| CAGTTCACACCGGAGCAAGA+TGG | - | chr8.4:20515113-20515132 | MS.gene43290:intron | 55.0% | |
| CATCTTGCTCCGGTGTGAAC+TGG | + | chr8.4:20515115-20515134 | None:intergenic | 55.0% | |
| CCCCGACTAAGAATGGATGG+TGG | + | chr8.4:20513993-20514012 | None:intergenic | 55.0% | |
| CTCCGATTACTGCGGGCAAT+CGG | + | chr8.4:20510896-20510915 | None:intergenic | 55.0% | |
| GCAGCTGAGGCCATACTTCT+TGG | - | chr8.4:20510548-20510567 | MS.gene43290:CDS | 55.0% | |
| GGTGCCCCTTCATTTGATGC+AGG | - | chr8.4:20512947-20512966 | MS.gene43290:intron | 55.0% | |
| GTACCCCATGTGCTCCATTC+AGG | - | chr8.4:20511961-20511980 | MS.gene43290:intron | 55.0% | |
| TAGTGCAGCGACAATGGGAG+GGG | + | chr8.4:20514821-20514840 | None:intergenic | 55.0% | |
| TCTCTTGTTCCCCAGATGGG+AGG | - | chr8.4:20510620-20510639 | MS.gene43290:intron | 55.0% | |
| TGACGAGCCGGATCCTATAG+AGG | - | chr8.4:20510971-20510990 | MS.gene43290:intron | 55.0% | |
| TGCAGCATAAGGCTTACCCC+AGG | + | chr8.4:20511664-20511683 | None:intergenic | 55.0% | |
| TGCTGCTCCATGGTGAGTTG+TGG | - | chr8.4:20512131-20512150 | MS.gene43290:intron | 55.0% | |
| ! | ACCTGCCGCACTGATAGTTC+AGG | - | chr8.4:20512099-20512118 | MS.gene43290:intron | 55.0% |
| !! | GAAGGGGCACCCCATTGAAA+TGG | + | chr8.4:20512938-20512957 | None:intergenic | 55.0% |
| !! | GGGGCATTTTGATGCAGCTG+AGG | - | chr8.4:20510535-20510554 | MS.gene43290:CDS | 55.0% |
| !! | TAGTCGGGGTATTGGTTGGC+AGG | - | chr8.4:20514004-20514023 | MS.gene43290:CDS | 55.0% |
| ACCACAACCGCATCCACCGA+AGG | - | chr8.4:20509365-20509384 | MS.gene43290:CDS | 60.0% | |
| AGCGACAATGGGAGGGGGAA+TGG | + | chr8.4:20514815-20514834 | None:intergenic | 60.0% | |
| AGTGCAGCGACAATGGGAGG+GGG | + | chr8.4:20514820-20514839 | None:intergenic | 60.0% | |
| CGATTGCCCGCAGTAATCGG+AGG | - | chr8.4:20510894-20510913 | MS.gene43290:CDS | 60.0% | |
| CTTGTTCCCCAGATGGGAGG+TGG | - | chr8.4:20510623-20510642 | MS.gene43290:intron | 60.0% | |
| GAGCCGTACCCATCTTGCTC+CGG | + | chr8.4:20515125-20515144 | None:intergenic | 60.0% | |
| GCCTGAACTATCAGTGCGGC+AGG | + | chr8.4:20512103-20512122 | None:intergenic | 60.0% | |
| GGTTCATCTGCTTTCGGCGC+CGG | + | chr8.4:20509348-20509367 | None:intergenic | 60.0% | |
| TCCTTCGGTGGATGCGGTTG+TGG | + | chr8.4:20509369-20509388 | None:intergenic | 60.0% | |
| ! | ACGCGTCGGCAGTCGAAGAG+TGG | - | chr8.4:20514329-20514348 | MS.gene43290:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 20509327 | 20515543 | 20509327 | ID=MS.gene43290 |
| chr8.4 | mRNA | 20509327 | 20515543 | 20509327 | ID=MS.gene43290.t1;Parent=MS.gene43290 |
| chr8.4 | exon | 20515435 | 20515543 | 20515435 | ID=MS.gene43290.t1.exon1;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20515435 | 20515543 | 20515435 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| chr8.4 | exon | 20514221 | 20514318 | 20514221 | ID=MS.gene43290.t1.exon2;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20514221 | 20514318 | 20514221 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| chr8.4 | exon | 20513878 | 20514054 | 20513878 | ID=MS.gene43290.t1.exon3;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20513878 | 20514054 | 20513878 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| chr8.4 | exon | 20513549 | 20513649 | 20513549 | ID=MS.gene43290.t1.exon4;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20513549 | 20513649 | 20513549 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| chr8.4 | exon | 20513204 | 20513279 | 20513204 | ID=MS.gene43290.t1.exon5;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20513204 | 20513279 | 20513204 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| chr8.4 | exon | 20513053 | 20513112 | 20513053 | ID=MS.gene43290.t1.exon6;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20513053 | 20513112 | 20513053 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| chr8.4 | exon | 20512728 | 20512912 | 20512728 | ID=MS.gene43290.t1.exon7;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20512728 | 20512912 | 20512728 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| chr8.4 | exon | 20511855 | 20511951 | 20511855 | ID=MS.gene43290.t1.exon8;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20511855 | 20511951 | 20511855 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| chr8.4 | exon | 20510845 | 20510931 | 20510845 | ID=MS.gene43290.t1.exon9;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20510845 | 20510931 | 20510845 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| chr8.4 | exon | 20510668 | 20510726 | 20510668 | ID=MS.gene43290.t1.exon10;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20510668 | 20510726 | 20510668 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| chr8.4 | exon | 20510477 | 20510568 | 20510477 | ID=MS.gene43290.t1.exon11;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20510477 | 20510568 | 20510477 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| chr8.4 | exon | 20510005 | 20510082 | 20510005 | ID=MS.gene43290.t1.exon12;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20510005 | 20510082 | 20510005 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| chr8.4 | exon | 20509735 | 20509895 | 20509735 | ID=MS.gene43290.t1.exon13;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20509735 | 20509895 | 20509735 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| chr8.4 | exon | 20509327 | 20509545 | 20509327 | ID=MS.gene43290.t1.exon14;Parent=MS.gene43290.t1 |
| chr8.4 | CDS | 20509327 | 20509545 | 20509327 | ID=cds.MS.gene43290.t1;Parent=MS.gene43290.t1 |
| Gene Sequence |
| Protein sequence |
