Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56947.t1 | RHN63538.1 | 100 | 532 | 0 | 0 | 1 | 532 | 1 | 532 | 1.70E-305 | 1057.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56947.t1 | Q27GI3 | 85.5 | 532 | 77 | 0 | 1 | 532 | 1 | 532 | 1.8e-271 | 936.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56947.t1 | A0A396IFG0 | 100.0 | 532 | 0 | 0 | 1 | 532 | 1 | 532 | 1.2e-305 | 1057.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56947 | MS.gene68064 | PPI |
| MS.gene56947 | MS.gene86930 | PPI |
| MS.gene56947 | MS.gene058853 | PPI |
| MS.gene56947 | MS.gene64768 | PPI |
| MS.gene56947 | MS.gene32869 | PPI |
| MS.gene37474 | MS.gene56947 | PPI |
| MS.gene56947 | MS.gene010624 | PPI |
| MS.gene56947 | MS.gene27812 | PPI |
| MS.gene56947 | MS.gene62686 | PPI |
| MS.gene56947 | MS.gene96701 | PPI |
| MS.gene56947 | MS.gene98973 | PPI |
| MS.gene56947 | MS.gene25800 | PPI |
| MS.gene56947 | MS.gene91317 | PPI |
| MS.gene56947 | MS.gene052674 | PPI |
| MS.gene015655 | MS.gene56947 | PPI |
| MS.gene56947 | MS.gene53408 | PPI |
| MS.gene56947 | MS.gene83067 | PPI |
| MS.gene56947 | MS.gene70718 | PPI |
| MS.gene56947 | MS.gene026529 | PPI |
| MS.gene56947 | MS.gene052675 | PPI |
| MS.gene56947 | MS.gene71606 | PPI |
| MS.gene56947 | MS.gene023585 | PPI |
| MS.gene56947 | MS.gene012865 | PPI |
| MS.gene56947 | MS.gene044204 | PPI |
| MS.gene56947 | MS.gene020517 | PPI |
| MS.gene56947 | MS.gene59470 | PPI |
| MS.gene56947 | MS.gene052677 | PPI |
| MS.gene56947 | MS.gene27811 | PPI |
| MS.gene56947 | MS.gene015069 | PPI |
| MS.gene56947 | MS.gene25185 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56947.t1 | MTR_4g106750 | 99.436 | 532 | 3 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1067 |
| MS.gene56947.t1 | MTR_3g078270 | 90.789 | 532 | 49 | 0 | 1 | 532 | 1 | 532 | 0.0 | 991 |
| MS.gene56947.t1 | MTR_4g106750 | 99.379 | 483 | 3 | 0 | 50 | 532 | 1 | 483 | 0.0 | 962 |
| MS.gene56947.t1 | MTR_8g063220 | 81.614 | 533 | 97 | 1 | 1 | 532 | 1 | 533 | 0.0 | 897 |
| MS.gene56947.t1 | MTR_5g035180 | 77.419 | 527 | 118 | 1 | 7 | 532 | 12 | 538 | 0.0 | 849 |
| MS.gene56947.t1 | MTR_4g106750 | 99.189 | 370 | 3 | 0 | 163 | 532 | 11 | 380 | 0.0 | 740 |
| MS.gene56947.t1 | MTR_3g103230 | 59.238 | 525 | 211 | 1 | 8 | 532 | 33 | 554 | 0.0 | 662 |
| MS.gene56947.t1 | MTR_1g106085 | 59.770 | 522 | 207 | 2 | 10 | 531 | 8 | 526 | 0.0 | 637 |
| MS.gene56947.t1 | MTR_8g086520 | 59.073 | 518 | 210 | 1 | 13 | 530 | 7 | 522 | 0.0 | 627 |
| MS.gene56947.t1 | MTR_5g022110 | 57.692 | 520 | 217 | 1 | 13 | 532 | 31 | 547 | 0.0 | 626 |
| MS.gene56947.t1 | MTR_2g016460 | 58.126 | 523 | 216 | 2 | 8 | 530 | 3 | 522 | 0.0 | 620 |
| MS.gene56947.t1 | MTR_3g080390 | 58.252 | 515 | 212 | 2 | 17 | 530 | 6 | 518 | 0.0 | 602 |
| MS.gene56947.t1 | MTR_8g086520 | 58.705 | 448 | 185 | 0 | 13 | 460 | 7 | 454 | 0.0 | 537 |
| MS.gene56947.t1 | MTR_1g021120 | 52.816 | 515 | 237 | 3 | 19 | 531 | 36 | 546 | 0.0 | 531 |
| MS.gene56947.t1 | MTR_8g086520 | 59.158 | 404 | 163 | 1 | 127 | 530 | 5 | 406 | 2.17e-173 | 495 |
| MS.gene56947.t1 | MTR_8g086520 | 58.586 | 396 | 164 | 0 | 13 | 408 | 7 | 402 | 1.47e-165 | 475 |
| MS.gene56947.t1 | MTR_8g068550 | 34.955 | 555 | 316 | 7 | 10 | 529 | 211 | 755 | 4.64e-108 | 340 |
| MS.gene56947.t1 | MTR_5g032020 | 36.100 | 518 | 293 | 4 | 40 | 525 | 182 | 693 | 1.47e-103 | 326 |
| MS.gene56947.t1 | MTR_2g084895 | 34.933 | 521 | 299 | 5 | 43 | 529 | 164 | 678 | 1.48e-94 | 302 |
| MS.gene56947.t1 | MTR_4g055290 | 34.549 | 521 | 296 | 8 | 43 | 529 | 171 | 680 | 4.43e-90 | 291 |
| MS.gene56947.t1 | MTR_2g103510 | 32.308 | 520 | 314 | 6 | 26 | 529 | 94 | 591 | 1.15e-89 | 287 |
| MS.gene56947.t1 | MTR_8g086535 | 65.347 | 101 | 35 | 0 | 308 | 408 | 18 | 118 | 5.01e-36 | 130 |
| MS.gene56947.t1 | MTR_1g079900 | 40.323 | 124 | 57 | 4 | 420 | 530 | 59 | 178 | 2.97e-20 | 89.4 |
| MS.gene56947.t1 | MTR_3g087320 | 53.731 | 67 | 17 | 1 | 461 | 527 | 72 | 124 | 6.00e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56947.t1 | AT5G62890 | 85.526 | 532 | 77 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| MS.gene56947.t1 | AT5G62890 | 85.526 | 532 | 77 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| MS.gene56947.t1 | AT5G62890 | 85.526 | 532 | 77 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| MS.gene56947.t1 | AT5G49990 | 80.798 | 526 | 100 | 1 | 8 | 532 | 3 | 528 | 0.0 | 874 |
| MS.gene56947.t1 | AT5G49990 | 80.798 | 526 | 100 | 1 | 8 | 532 | 3 | 528 | 0.0 | 874 |
| MS.gene56947.t1 | AT5G49990 | 80.798 | 526 | 100 | 1 | 8 | 532 | 3 | 528 | 0.0 | 874 |
| MS.gene56947.t1 | AT5G49990 | 80.798 | 526 | 100 | 1 | 8 | 532 | 3 | 528 | 0.0 | 874 |
| MS.gene56947.t1 | AT1G60030 | 76.091 | 527 | 126 | 0 | 6 | 532 | 12 | 538 | 0.0 | 847 |
| MS.gene56947.t1 | AT5G62890 | 85.435 | 460 | 67 | 0 | 1 | 460 | 1 | 460 | 0.0 | 814 |
| MS.gene56947.t1 | AT1G10540 | 68.216 | 538 | 164 | 3 | 1 | 531 | 1 | 538 | 0.0 | 777 |
| MS.gene56947.t1 | AT1G49960 | 60.496 | 524 | 207 | 0 | 8 | 531 | 2 | 525 | 0.0 | 645 |
| MS.gene56947.t1 | AT2G34190 | 59.846 | 518 | 206 | 1 | 13 | 530 | 7 | 522 | 0.0 | 630 |
| MS.gene56947.t1 | AT1G65550 | 54.064 | 529 | 234 | 2 | 10 | 531 | 14 | 540 | 0.0 | 607 |
| MS.gene56947.t1 | AT2G05760 | 55.922 | 515 | 224 | 2 | 17 | 530 | 6 | 518 | 0.0 | 590 |
| MS.gene56947.t1 | AT1G10540 | 67.268 | 388 | 120 | 3 | 1 | 381 | 1 | 388 | 0.0 | 542 |
| MS.gene56947.t1 | AT2G26510 | 49.516 | 517 | 254 | 3 | 18 | 531 | 36 | 548 | 3.94e-174 | 503 |
| MS.gene56947.t1 | AT5G25420 | 48.533 | 443 | 158 | 5 | 10 | 452 | 26 | 398 | 3.96e-141 | 414 |
| MS.gene56947.t1 | AT2G26510 | 50.954 | 367 | 174 | 2 | 18 | 381 | 36 | 399 | 8.00e-122 | 364 |
| MS.gene56947.t1 | AT2G26510 | 50.282 | 354 | 170 | 2 | 18 | 368 | 36 | 386 | 2.40e-115 | 348 |
| MS.gene56947.t1 | AT4G38050 | 35.249 | 522 | 300 | 5 | 40 | 529 | 189 | 704 | 1.85e-94 | 303 |
| MS.gene56947.t1 | AT2G27810 | 35.509 | 521 | 297 | 5 | 43 | 529 | 186 | 701 | 1.83e-93 | 300 |
| MS.gene56947.t1 | AT2G27810 | 34.312 | 545 | 295 | 7 | 43 | 529 | 186 | 725 | 4.03e-89 | 289 |
| MS.gene56947.t1 | AT2G27810 | 39.259 | 405 | 227 | 3 | 43 | 429 | 186 | 589 | 2.92e-79 | 259 |
| MS.gene56947.t1 | AT2G27810 | 39.665 | 358 | 197 | 3 | 43 | 382 | 186 | 542 | 1.59e-69 | 233 |
Find 150 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCTTGTGTCAGTCTTAA+AGG | 0.116755 | 8.1:-18906592 | None:intergenic |
| TCAACCCTTCAAATAGTATT+AGG | 0.142814 | 8.1:+18902199 | MS.gene56947:CDS |
| CTGTATGAGTTAGGCTTTCC+TGG | 0.181335 | 8.1:+18902574 | MS.gene56947:CDS |
| TTGGTATCTCTTGTTGGTTT+TGG | 0.200317 | 8.1:+18902550 | MS.gene56947:CDS |
| ATTAGGCTTCTCCATCTTCT+TGG | 0.222669 | 8.1:+18906162 | MS.gene56947:CDS |
| CAATCAAAAGCTTTCGTTGC+TGG | 0.262369 | 8.1:+18906477 | MS.gene56947:CDS |
| AACGAGTACACAGCAATAAA+TGG | 0.288001 | 8.1:+18906208 | MS.gene56947:CDS |
| GTACCCCATGTGCTCCATTC+AGG | 0.304871 | 8.1:+18902892 | MS.gene56947:CDS |
| TGTACGTTTAACGTGGTTAT+AGG | 0.312485 | 8.1:-18902998 | None:intergenic |
| GCAGCTGAGGCCATACTTCT+TGG | 0.314540 | 8.1:+18901450 | MS.gene56947:intron |
| CAACCCTTCAAATAGTATTA+GGG | 0.316874 | 8.1:+18902200 | MS.gene56947:CDS |
| TTTAGGACCAAGTTTGTATT+AGG | 0.317423 | 8.1:+18906145 | MS.gene56947:CDS |
| TATTAGGGTTTAGCGGTCTT+TGG | 0.320950 | 8.1:+18902215 | MS.gene56947:CDS |
| TAGTGAAAATGCTGGTCTTT+TGG | 0.321952 | 8.1:+18905231 | MS.gene56947:intron |
| TTAGGCTTCTCCATCTTCTT+GGG | 0.360098 | 8.1:+18906163 | MS.gene56947:CDS |
| GTTCCTTTGGTATCTCTTGT+TGG | 0.360812 | 8.1:+18902544 | MS.gene56947:CDS |
| ACATTGGTGCAAACGTTGTT+TGG | 0.361228 | 8.1:+18901771 | MS.gene56947:CDS |
| TACACAGCAATAAATGGTTT+TGG | 0.364347 | 8.1:+18906214 | MS.gene56947:CDS |
| CCAACATTATCTTGTGATGC+TGG | 0.375334 | 8.1:+18901476 | MS.gene56947:CDS |
| ATTTATTTAGATTGAAAGGC+AGG | 0.381735 | 8.1:-18906629 | None:intergenic |
| CATCTTGCTCCGGTGTGAAC+TGG | 0.385883 | 8.1:-18906238 | None:intergenic |
| TTACATTGCCACCTCCCATC+TGG | 0.391083 | 8.1:-18901533 | None:intergenic |
| ATAAGAAAGAATCTGCTATT+CGG | 0.396790 | 8.1:+18906532 | MS.gene56947:CDS |
| TCCACTCTCAGCAGTTCCTT+TGG | 0.398718 | 8.1:+18902531 | MS.gene56947:CDS |
| TGGAGTTGTTGCATATTTCT+TGG | 0.399662 | 8.1:+18906497 | MS.gene56947:CDS |
| GGTTGTGGTTCATCTGCTTT+CGG | 0.406675 | 8.1:-18900241 | None:intergenic |
| TTCTCATACAATACCTCTAT+AGG | 0.410181 | 8.1:-18901888 | None:intergenic |
| TCCATTCTTAGTCGGGGTAT+TGG | 0.410958 | 8.1:+18904928 | MS.gene56947:CDS |
| AGCCGATTGCCCGCAGTAAT+CGG | 0.411159 | 8.1:+18901795 | MS.gene56947:CDS |
| GTTGCTAAGTGTGTAGAGAT+TGG | 0.411415 | 8.1:+18902689 | MS.gene56947:CDS |
| TTATCAGGATTGTTTGGAAC+CGG | 0.413477 | 8.1:+18905091 | MS.gene56947:CDS |
| ACCATGGAGCAGCATCTATT+AGG | 0.414783 | 8.1:-18903053 | None:intergenic |
| GGTGTCGGCATTCTGTTATC+AGG | 0.417532 | 8.1:+18905076 | MS.gene56947:CDS |
| ACCACCATCCATTCTTAGTC+GGG | 0.419736 | 8.1:+18904921 | MS.gene56947:CDS |
| ATGTTGGAAACCAAGAAGTA+TGG | 0.422658 | 8.1:-18901460 | None:intergenic |
| ATTCTGTTATCAGGATTGTT+TGG | 0.423854 | 8.1:+18905085 | MS.gene56947:CDS |
| GGTTCATCTGCTTTCGGCGC+CGG | 0.425593 | 8.1:-18900235 | None:intergenic |
| AGCGACAATTAGAGCGCCTT+GGG | 0.426723 | 8.1:-18902176 | None:intergenic |
| TACTTCTCTTGTTCCCCAGA+TGG | 0.427384 | 8.1:+18901518 | MS.gene56947:CDS |
| CAGCCACAAAGAGTAGTGTT+TGG | 0.429045 | 8.1:-18901740 | None:intergenic |
| TATCCAAACACTACTCTTTG+TGG | 0.431001 | 8.1:+18901737 | MS.gene56947:CDS |
| TAAACCCTAATACTATTTGA+AGG | 0.432274 | 8.1:-18902204 | None:intergenic |
| GAAGGGGCACCCCATTGAAA+TGG | 0.438034 | 8.1:-18903883 | None:intergenic |
| GAGTTCCGTATCCATTTCAA+TGG | 0.438469 | 8.1:+18903872 | MS.gene56947:CDS |
| GGATTGTTTGGAACCGGCAT+TGG | 0.444794 | 8.1:+18905097 | MS.gene56947:CDS |
| ACCAATACCCCGACTAAGAA+TGG | 0.448207 | 8.1:-18904929 | None:intergenic |
| TGTATGAGTTAGGCTTTCCT+GGG | 0.448491 | 8.1:+18902575 | MS.gene56947:CDS |
| TGCTTGTTCTTTGCTTATGT+CGG | 0.453106 | 8.1:+18905970 | MS.gene56947:CDS |
| TAGTCGGGGTATTGGTTGGC+AGG | 0.453343 | 8.1:+18904936 | MS.gene56947:CDS |
| TCCTTCGGTGGATGCGGTTG+TGG | 0.455133 | 8.1:-18900256 | None:intergenic |
| CTTGTTCCCCAGATGGGAGG+TGG | 0.462178 | 8.1:+18901525 | MS.gene56947:CDS |
| TACATTGCCACCTCCCATCT+GGG | 0.463374 | 8.1:-18901532 | None:intergenic |
| ACTTCTCTTGTTCCCCAGAT+GGG | 0.464390 | 8.1:+18901519 | MS.gene56947:CDS |
| AGTTCCGTATCCATTTCAAT+GGG | 0.464869 | 8.1:+18903873 | MS.gene56947:CDS |
| AGAATGATCGATATTGTTGC+TGG | 0.465220 | 8.1:-18901837 | None:intergenic |
| ACAATATCGATCATTCTTGC+TGG | 0.468221 | 8.1:+18901843 | MS.gene56947:CDS |
| CTCCGATTACTGCGGGCAAT+CGG | 0.469149 | 8.1:-18901797 | None:intergenic |
| TACAATACCTCTATAGGATC+CGG | 0.469817 | 8.1:-18901882 | None:intergenic |
| CAGTATAGTGCAGCGACAAT+GGG | 0.472587 | 8.1:-18905949 | None:intergenic |
| GTTATGCAGTAAGAAACATT+TGG | 0.472916 | 8.1:-18900286 | None:intergenic |
| ATTGCTAGTATTTGTTTCAC+AGG | 0.475975 | 8.1:+18902727 | MS.gene56947:CDS |
| ACTTGCCGCACTGATAGTTC+AGG | 0.479211 | 8.1:+18903030 | MS.gene56947:CDS |
| CAACATTATCTTGTGATGCT+GGG | 0.482071 | 8.1:+18901477 | MS.gene56947:CDS |
| ACATTTGGAAGCTGATCCTT+CGG | 0.486409 | 8.1:-18900271 | None:intergenic |
| GATAGATAAACCCAAGAAGA+TGG | 0.491688 | 8.1:-18906173 | None:intergenic |
| TTAGGAAGAAATGGCAGGAG+GGG | 0.492516 | 8.1:+18900207 | None:intergenic |
| GTTAGGAAGAAATGGCAGGA+GGG | 0.493100 | 8.1:+18900206 | None:intergenic |
| ACTTGGTCCTAAAACTATTG+AGG | 0.494306 | 8.1:-18906135 | None:intergenic |
| TTCTTAGTCGGGGTATTGGT+TGG | 0.497089 | 8.1:+18904932 | MS.gene56947:CDS |
| AATACTAGCAATACAAGCTC+TGG | 0.497265 | 8.1:-18902716 | None:intergenic |
| GCTTCGCCTGCATCAAATGA+AGG | 0.499113 | 8.1:-18903901 | None:intergenic |
| GCAGTATAGTGCAGCGACAA+TGG | 0.501040 | 8.1:-18905950 | None:intergenic |
| AAGCGACAATTAGAGCGCCT+TGG | 0.503518 | 8.1:-18902177 | None:intergenic |
| CAAATAGTATTAGGGTTTAG+CGG | 0.510367 | 8.1:+18902208 | MS.gene56947:CDS |
| GGTGCCCCTTCATTTGATGC+AGG | 0.512396 | 8.1:+18903895 | MS.gene56947:CDS |
| TTTCCTTATAGTGAAAATGC+TGG | 0.520510 | 8.1:+18905223 | MS.gene56947:intron |
| TACCACCATCCATTCTTAGT+CGG | 0.522635 | 8.1:+18904920 | MS.gene56947:CDS |
| AGTTCACACCGGAGCAAGAT+GGG | 0.524476 | 8.1:+18906240 | MS.gene56947:CDS |
| AGCTGATCCTTCGGTGGATG+CGG | 0.527005 | 8.1:-18900262 | None:intergenic |
| TAGGAAGAAATGGCAGGAGG+GGG | 0.528464 | 8.1:+18900208 | None:intergenic |
| AAGTATTTATTTAGATTGAA+AGG | 0.529186 | 8.1:-18906633 | None:intergenic |
| CAAACACTACTCTTTGTGGC+TGG | 0.539278 | 8.1:+18901741 | MS.gene56947:CDS |
| CTAAGAATGGATGGTGGTAA+TGG | 0.540732 | 8.1:-18904916 | None:intergenic |
| ATTGGTTACATGCAGTCTAG+TGG | 0.545558 | 8.1:+18904856 | MS.gene56947:intron |
| GTCTTTGGCGAAATGTTGCA+AGG | 0.546467 | 8.1:+18902230 | MS.gene56947:CDS |
| TGACGAGCCGGATCCTATAG+AGG | 0.546780 | 8.1:+18901875 | MS.gene56947:CDS |
| AGCATTGGTGGGATAAGTAC+AGG | 0.547825 | 8.1:+18906568 | MS.gene56947:CDS |
| CAGTTCACACCGGAGCAAGA+TGG | 0.550387 | 8.1:+18906239 | MS.gene56947:CDS |
| AAACCCTAATACTATTTGAA+GGG | 0.555146 | 8.1:-18902203 | None:intergenic |
| GGAGAAGCCTAATACAAACT+TGG | 0.557179 | 8.1:-18906152 | None:intergenic |
| AACAAAGGATGTCATCATCA+TGG | 0.564105 | 8.1:-18903929 | None:intergenic |
| GCCTAATAGATGCTGCTCCA+TGG | 0.564558 | 8.1:+18903052 | MS.gene56947:CDS |
| GAAATTCAAGAAGATAATGC+GGG | 0.565136 | 8.1:+18902150 | MS.gene56947:intron |
| ACCACCTAAGTTACACAGAT+GGG | 0.565518 | 8.1:-18906656 | None:intergenic |
| CGATATTGTTGCTGGAACGA+AGG | 0.565616 | 8.1:-18901829 | None:intergenic |
| CCAGCATCACAAGATAATGT+TGG | 0.565678 | 8.1:-18901476 | None:intergenic |
| AAGACAGAGGAAAGCATTGG+TGG | 0.566646 | 8.1:+18906556 | MS.gene56947:CDS |
| AAGATAATGCGGGCAACCCA+AGG | 0.567568 | 8.1:+18902160 | MS.gene56947:CDS |
| GAGCCATACCCATCTTGCTC+CGG | 0.572236 | 8.1:-18906248 | None:intergenic |
| ATCCTTTGTTGCTCTAGTAG+AGG | 0.572855 | 8.1:+18903942 | MS.gene56947:CDS |
| TAGTGCAGCGACAATGGGAG+GGG | 0.574206 | 8.1:-18905944 | None:intergenic |
| AGTAACTCACGCCAAGGTGG+AGG | 0.574584 | 8.1:-18900313 | None:intergenic |
| TACAGTTAGGAAGAAATGGC+AGG | 0.575001 | 8.1:+18900202 | None:intergenic |
| AGAGTGGTTCAAATATCCGC+AGG | 0.575012 | 8.1:+18905277 | MS.gene56947:CDS |
| CTTCGCCTGCATCAAATGAA+GGG | 0.577275 | 8.1:-18903900 | None:intergenic |
| TCTCTTGTTCCCCAGATGGG+AGG | 0.578580 | 8.1:+18901522 | MS.gene56947:CDS |
| AACCACCTAAGTTACACAGA+TGG | 0.579661 | 8.1:-18906657 | None:intergenic |
| ATATCATTTGTAGGCTCGGG+AGG | 0.585910 | 8.1:+18906088 | MS.gene56947:intron |
| ACGCGTCGGCAGTCGAAGAG+TGG | 0.586302 | 8.1:+18905261 | MS.gene56947:CDS |
| ATCTGGGGAACAAGAGAAGT+AGG | 0.586891 | 8.1:-18901516 | None:intergenic |
| GCACCCCATTGAAATGGATA+CGG | 0.591804 | 8.1:-18903877 | None:intergenic |
| TACCTCTACTAGAGCAACAA+AGG | 0.594784 | 8.1:-18903944 | None:intergenic |
| TGGTCGATTCAATGACGAGC+CGG | 0.595657 | 8.1:+18901863 | MS.gene56947:CDS |
| TTTATTTAGATTGAAAGGCA+GGG | 0.596834 | 8.1:-18906628 | None:intergenic |
| GTGTACTCGTTGAAGTACTG+TGG | 0.597313 | 8.1:-18906196 | None:intergenic |
| ACCAAAGGAACTGCTGAGAG+TGG | 0.597590 | 8.1:-18902532 | None:intergenic |
| TAAGAGCCTCCGATTACTGC+GGG | 0.598802 | 8.1:-18901804 | None:intergenic |
| TATAGTGCAGCGACAATGGG+AGG | 0.601160 | 8.1:-18905946 | None:intergenic |
| AGAAATTCAAGAAGATAATG+CGG | 0.603700 | 8.1:+18902149 | MS.gene56947:intron |
| ATAGTGCAGCGACAATGGGA+GGG | 0.605016 | 8.1:-18905945 | None:intergenic |
| GGAAAGACAGAGGAAAGCAT+TGG | 0.608090 | 8.1:+18906553 | MS.gene56947:CDS |
| GGATGTCATCATCATGGCAA+AGG | 0.608481 | 8.1:-18903923 | None:intergenic |
| TGTACTCGTTGAAGTACTGT+GGG | 0.612732 | 8.1:-18906195 | None:intergenic |
| TGTTCACGGTTGCAATTGTG+TGG | 0.617824 | 8.1:+18902944 | MS.gene56947:CDS |
| ACCACAACCGCATCCACCGA+AGG | 0.623080 | 8.1:+18900255 | MS.gene56947:CDS |
| TTTCCTGAATGGAGCACATG+GGG | 0.627157 | 8.1:-18902895 | None:intergenic |
| GCATAACAAGTCCTCCACCT+TGG | 0.628357 | 8.1:+18900302 | MS.gene56947:CDS |
| TTCGCCTGCATCAAATGAAG+GGG | 0.629691 | 8.1:-18903899 | None:intergenic |
| TTTGGAAGCTGATCCTTCGG+TGG | 0.629961 | 8.1:-18900268 | None:intergenic |
| AGTGCAGCGACAATGGGAGG+GGG | 0.632519 | 8.1:-18905943 | None:intergenic |
| ATACCCCGACTAAGAATGGA+TGG | 0.633541 | 8.1:-18904925 | None:intergenic |
| AAACCAACAAGAGATACCAA+AGG | 0.636815 | 8.1:-18902547 | None:intergenic |
| CCACCATCCATTCTTAGTCG+GGG | 0.641952 | 8.1:+18904922 | MS.gene56947:CDS |
| AGACAGAGGAAAGCATTGGT+GGG | 0.646989 | 8.1:+18906557 | MS.gene56947:CDS |
| GAGTGGTTCAAATATCCGCA+GGG | 0.654618 | 8.1:+18905278 | MS.gene56947:CDS |
| CGATTGCCCGCAGTAATCGG+AGG | 0.657165 | 8.1:+18901798 | MS.gene56947:CDS |
| TCTGCTATTCGGAAAGACAG+AGG | 0.662986 | 8.1:+18906543 | MS.gene56947:CDS |
| AGATACAGAAGATCCAATGC+CGG | 0.666151 | 8.1:-18905110 | None:intergenic |
| GTATGAGTTAGGCTTTCCTG+GGG | 0.670750 | 8.1:+18902576 | MS.gene56947:CDS |
| ACATTGCCACCTCCCATCTG+GGG | 0.672994 | 8.1:-18901531 | None:intergenic |
| TCTGCGTTGTACGTTTAACG+TGG | 0.676085 | 8.1:-18903005 | None:intergenic |
| ATAAGAGCCTCCGATTACTG+CGG | 0.677413 | 8.1:-18901805 | None:intergenic |
| AGTTAGGAAGAAATGGCAGG+AGG | 0.681314 | 8.1:+18900205 | None:intergenic |
| TAAAGTAACTCACGCCAAGG+TGG | 0.696583 | 8.1:-18900316 | None:intergenic |
| TGTGGCTGGAATCAACACAT+TGG | 0.698610 | 8.1:+18901755 | MS.gene56947:CDS |
| AAAGAAAATCATAAACCCTG+CGG | 0.713858 | 8.1:-18905293 | None:intergenic |
| AAGAGAAGTAGGAATTAACA+CGG | 0.724184 | 8.1:-18901505 | None:intergenic |
| CCCCGACTAAGAATGGATGG+TGG | 0.740032 | 8.1:-18904922 | None:intergenic |
| GTTCCGTATCCATTTCAATG+GGG | 0.744828 | 8.1:+18903874 | MS.gene56947:CDS |
| TTAGGCCTGAACTATCAGTG+CGG | 0.794578 | 8.1:-18903035 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAAATAATAATATTTT+TGG | - | chr8.1:18901662-18901681 | None:intergenic | 0.0% |
| !! | AAATCAATAAATTGAAAATA+GGG | - | chr8.1:18900982-18901001 | None:intergenic | 10.0% |
| !! | AATTAAAAATATCCAAATAA+AGG | - | chr8.1:18903973-18903992 | None:intergenic | 10.0% |
| !! | ATTAAATTTGATGTAAAATT+TGG | + | chr8.1:18901415-18901434 | MS.gene56947:intron | 10.0% |
| !! | TTAAATTTGATGTAAAATTT+GGG | + | chr8.1:18901416-18901435 | MS.gene56947:intron | 10.0% |
| !!! | ATTTGTTCATTTTTATAAAA+TGG | + | chr8.1:18903453-18903472 | MS.gene56947:intron | 10.0% |
| !!! | ATTTTACATCAAATTTAATA+AGG | - | chr8.1:18901414-18901433 | None:intergenic | 10.0% |
| !!! | TAAATTACTTTTTTAGTTAT+GGG | + | chr8.1:18904581-18904600 | MS.gene56947:intron | 10.0% |
| !!! | TATTATTATTTTTAAACAAG+AGG | + | chr8.1:18901666-18901685 | MS.gene56947:intron | 10.0% |
| !! | AAGTATTTATTTAGATTGAA+AGG | - | chr8.1:18906636-18906655 | None:intergenic | 15.0% |
| !! | GAAATAAGAAGAAAAATAAA+AGG | + | chr8.1:18900601-18900620 | MS.gene56947:intron | 15.0% |
| !! | GAAATCAATAAATTGAAAAT+AGG | - | chr8.1:18900983-18901002 | None:intergenic | 15.0% |
| !! | TAAATTTGATGTAAAATTTG+GGG | + | chr8.1:18901417-18901436 | MS.gene56947:intron | 15.0% |
| !! | TATCAATATGAAATATTCTA+GGG | - | chr8.1:18905430-18905449 | None:intergenic | 15.0% |
| !! | TTATCAATATGAAATATTCT+AGG | - | chr8.1:18905431-18905450 | None:intergenic | 15.0% |
| !!! | AAAACAAAATTTTTGAAATC+TGG | + | chr8.1:18904229-18904248 | MS.gene56947:intron | 15.0% |
| !!! | AAATAATAATATTTTTGGCT+AGG | - | chr8.1:18901657-18901676 | None:intergenic | 15.0% |
| !!! | ATATTAGTTTCTTATTCATT+GGG | + | chr8.1:18903830-18903849 | MS.gene56947:intron | 15.0% |
| !!! | ATCTTTTATAAACATTTTAC+TGG | + | chr8.1:18901135-18901154 | MS.gene56947:intron | 15.0% |
| !!! | CATTTTTATAAAATGGTTAA+AGG | + | chr8.1:18903460-18903479 | MS.gene56947:intron | 15.0% |
| !!! | CTAAATTACTTTTTTAGTTA+TGG | + | chr8.1:18904580-18904599 | MS.gene56947:intron | 15.0% |
| !!! | GTTTTATAACTTATGTTAAT+TGG | + | chr8.1:18904838-18904857 | MS.gene56947:intron | 15.0% |
| !!! | TAATAAAATAAGTATTGCAT+AGG | - | chr8.1:18904083-18904102 | None:intergenic | 15.0% |
| !!! | TAATCTTGACTTTTAAAAAA+TGG | + | chr8.1:18903484-18903503 | MS.gene56947:intron | 15.0% |
| !!! | TAATTTGTACTACTAAAATT+TGG | + | chr8.1:18904672-18904691 | MS.gene56947:intron | 15.0% |
| !!! | TTTAAGTTTTATGAAGTAAT+CGG | - | chr8.1:18903237-18903256 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTAGAAAAATCTA+GGG | + | chr8.1:18904277-18904296 | MS.gene56947:intron | 15.0% |
| !!! | TTTTTTGTTTAGAAAAATCT+AGG | + | chr8.1:18904276-18904295 | MS.gene56947:intron | 15.0% |
| !! | AAATTTGATGTAAAATTTGG+GGG | + | chr8.1:18901418-18901437 | MS.gene56947:intron | 20.0% |
| !! | AATAAGAAACTAATATCTCA+AGG | - | chr8.1:18903826-18903845 | None:intergenic | 20.0% |
| !! | ATAAAAGATAGTAAATGAGA+GGG | + | chr8.1:18905447-18905466 | MS.gene56947:intron | 20.0% |
| !! | ATATTCATAACACGAATAAT+CGG | - | chr8.1:18904771-18904790 | None:intergenic | 20.0% |
| !! | ATGCCCAAAAAATAAAAATA+GGG | - | chr8.1:18902071-18902090 | None:intergenic | 20.0% |
| !! | ATTATATAACAACAATGTTG+AGG | + | chr8.1:18901214-18901233 | MS.gene56947:intron | 20.0% |
| !! | GATAACTTTAATCGATATAA+TGG | + | chr8.1:18904406-18904425 | MS.gene56947:intron | 20.0% |
| !! | TAAATCATCAAAATTCAAGT+TGG | + | chr8.1:18904481-18904500 | MS.gene56947:intron | 20.0% |
| !! | TATAAAACTTAATTCTAGTG+AGG | - | chr8.1:18904826-18904845 | None:intergenic | 20.0% |
| !! | TATAGAAGTTAATATAGAGT+TGG | - | chr8.1:18905823-18905842 | None:intergenic | 20.0% |
| !! | TATGCCCAAAAAATAAAAAT+AGG | - | chr8.1:18902072-18902091 | None:intergenic | 20.0% |
| !! | TCATCTTCTTTAATTAAAGT+TGG | - | chr8.1:18905167-18905186 | None:intergenic | 20.0% |
| !! | TGCTCATTATTAACTAAAAT+AGG | - | chr8.1:18904052-18904071 | None:intergenic | 20.0% |
| !! | TGTATAAATGCATTTATTTG+TGG | - | chr8.1:18904996-18905015 | None:intergenic | 20.0% |
| !! | TGTCTTCCTAAAATAATTAT+TGG | - | chr8.1:18900773-18900792 | None:intergenic | 20.0% |
| !! | TTATGTCATATTGTTGAATT+TGG | + | chr8.1:18901188-18901207 | MS.gene56947:intron | 20.0% |
| !!! | AAATCATCAAAATTCAAGTT+GGG | + | chr8.1:18904482-18904501 | MS.gene56947:intron | 20.0% |
| !!! | AATAATTCAATTTTGATACC+TGG | + | chr8.1:18902655-18902674 | MS.gene56947:intron | 20.0% |
| !!! | AATCATTATCATTTTCAAGT+TGG | - | chr8.1:18904454-18904473 | None:intergenic | 20.0% |
| !!! | AATTTTAGCCATAGATATAT+TGG | + | chr8.1:18900386-18900405 | MS.gene56947:intron | 20.0% |
| !!! | ATTTTCATAATAGGGATTTA+GGG | + | chr8.1:18901075-18901094 | MS.gene56947:intron | 20.0% |
| !!! | CATTTTACTGGTTAATTATA+AGG | + | chr8.1:18901147-18901166 | MS.gene56947:intron | 20.0% |
| !!! | CCATTTACTATCTTTTAAAA+GGG | - | chr8.1:18905643-18905662 | None:intergenic | 20.0% |
| !!! | CCTTTTAAAAGATAGTAAAT+GGG | + | chr8.1:18905641-18905660 | MS.gene56947:intron | 20.0% |
| !!! | GATATTAGTTTCTTATTCAT+TGG | + | chr8.1:18903829-18903848 | MS.gene56947:intron | 20.0% |
| !!! | GATCCCTATTTTTATTTTTT+GGG | + | chr8.1:18902065-18902084 | MS.gene56947:intron | 20.0% |
| !!! | TATTCTTTTTTTTGACAAGA+TGG | + | chr8.1:18906281-18906300 | MS.gene56947:intron | 20.0% |
| !!! | TATTTTCATAATAGGGATTT+AGG | + | chr8.1:18901074-18901093 | MS.gene56947:intron | 20.0% |
| !!! | TATTTTTTCTTTTACTGTGT+AGG | + | chr8.1:18905892-18905911 | MS.gene56947:intron | 20.0% |
| !!! | TCCTAGTTATTTTCATAATA+GGG | + | chr8.1:18901067-18901086 | MS.gene56947:intron | 20.0% |
| !!! | TGCTTGATAATTTTTCTTTT+TGG | + | chr8.1:18900667-18900686 | MS.gene56947:intron | 20.0% |
| !!! | TTATTTGAAACATAGATACT+GGG | - | chr8.1:18902777-18902796 | None:intergenic | 20.0% |
| !!! | TTCCTAGTTATTTTCATAAT+AGG | + | chr8.1:18901066-18901085 | MS.gene56947:intron | 20.0% |
| ! | AAACATTAAAGCTATTACAC+TGG | - | chr8.1:18904617-18904636 | None:intergenic | 25.0% |
| ! | AAACCCTAATACTATTTGAA+GGG | - | chr8.1:18902206-18902225 | None:intergenic | 25.0% |
| ! | AAATCAGAATAAAAGTAGCA+TGG | - | chr8.1:18901114-18901133 | None:intergenic | 25.0% |
| ! | AAGAATTACAACAAAAAGGA+AGG | - | chr8.1:18903745-18903764 | None:intergenic | 25.0% |
| ! | AGAAAGACACTTTAAACAAT+TGG | - | chr8.1:18900463-18900482 | None:intergenic | 25.0% |
| ! | AGAAATTCAAGAAGATAATG+CGG | + | chr8.1:18902149-18902168 | MS.gene56947:intron | 25.0% |
| ! | ATAAGAAAGAATCTGCTATT+CGG | + | chr8.1:18906532-18906551 | MS.gene56947:CDS | 25.0% |
| ! | ATTAGAATAACATGCAAGAA+TGG | - | chr8.1:18900556-18900575 | None:intergenic | 25.0% |
| ! | ATTTATTTAGATTGAAAGGC+AGG | - | chr8.1:18906632-18906651 | None:intergenic | 25.0% |
| ! | CAATTTAAATATGCAGCATA+AGG | - | chr8.1:18902606-18902625 | None:intergenic | 25.0% |
| ! | CATCACTGATAATACTAATA+TGG | - | chr8.1:18903309-18903328 | None:intergenic | 25.0% |
| ! | CTCTTATGAATATGTTATCA+GGG | + | chr8.1:18904128-18904147 | MS.gene56947:intron | 25.0% |
| ! | GAAATTCAATCATCAGAAAT+AGG | - | chr8.1:18902354-18902373 | None:intergenic | 25.0% |
| ! | GATAAAAGATAGTAAATGAG+AGG | + | chr8.1:18905446-18905465 | MS.gene56947:intron | 25.0% |
| ! | GTTCAAGAATTACAACAAAA+AGG | - | chr8.1:18903749-18903768 | None:intergenic | 25.0% |
| ! | GTTGTAATTCTACATACATA+TGG | + | chr8.1:18901037-18901056 | MS.gene56947:intron | 25.0% |
| ! | TAAAAGATAGTAAATGAGAG+GGG | + | chr8.1:18905448-18905467 | MS.gene56947:intron | 25.0% |
| ! | TAAACCCTAATACTATTTGA+AGG | - | chr8.1:18902207-18902226 | None:intergenic | 25.0% |
| ! | TCCCTATTATGAAAATAACT+AGG | - | chr8.1:18901071-18901090 | None:intergenic | 25.0% |
| ! | TTCTAATTCTATACTTAGCA+AGG | + | chr8.1:18900569-18900588 | MS.gene56947:intron | 25.0% |
| ! | TTTATTTAGATTGAAAGGCA+GGG | - | chr8.1:18906631-18906650 | None:intergenic | 25.0% |
| !! | AAAATAAGTATTGCATAGGA+AGG | - | chr8.1:18904079-18904098 | None:intergenic | 25.0% |
| !! | AAGTAAATCAAAAGCATGAA+TGG | - | chr8.1:18906029-18906048 | None:intergenic | 25.0% |
| !! | ATGATTTTCTTTTCGATACT+AGG | + | chr8.1:18905304-18905323 | MS.gene56947:CDS | 25.0% |
| !! | CCCATTTACTATCTTTTAAA+AGG | - | chr8.1:18905644-18905663 | None:intergenic | 25.0% |
| !! | CTTATTTGAAACATAGATAC+TGG | - | chr8.1:18902778-18902797 | None:intergenic | 25.0% |
| !! | GTCTGACCAATAATTATTTT+AGG | + | chr8.1:18900764-18900783 | MS.gene56947:intron | 25.0% |
| !! | GTTAGTTATAGACTTTTATC+AGG | - | chr8.1:18905801-18905820 | None:intergenic | 25.0% |
| !! | GTTAGTTATAGTCTTTTATC+AGG | - | chr8.1:18905718-18905737 | None:intergenic | 25.0% |
| !! | TTTATCATGATATTGATGAC+AGG | - | chr8.1:18901308-18901327 | None:intergenic | 25.0% |
| !! | TTTCTATATCTTTCTAGCAT+TGG | + | chr8.1:18902818-18902837 | MS.gene56947:intron | 25.0% |
| !! | TTTCTTATTCATTGGGATTT+TGG | + | chr8.1:18903837-18903856 | MS.gene56947:intron | 25.0% |
| !! | TTTTACTGTGTAGGAAAATT+TGG | + | chr8.1:18905901-18905920 | MS.gene56947:intron | 25.0% |
| !!! | AAAGTGCAATTTTAATCAAG+AGG | - | chr8.1:18901631-18901650 | None:intergenic | 25.0% |
| !!! | AATCATCAAAATTCAAGTTG+GGG | + | chr8.1:18904483-18904502 | MS.gene56947:intron | 25.0% |
| !!! | ACTTTGGTGTTTGTAAAAAA+CGG | + | chr8.1:18904338-18904357 | MS.gene56947:intron | 25.0% |
| !!! | ATTATCATTTTCAAGTTGGA+AGG | - | chr8.1:18904450-18904469 | None:intergenic | 25.0% |
| !!! | CCCTTTTAAAAGATAGTAAA+TGG | + | chr8.1:18905640-18905659 | MS.gene56947:intron | 25.0% |
| !!! | GAAAAAATAGTAAGTGTTGA+AGG | - | chr8.1:18905881-18905900 | None:intergenic | 25.0% |
| !!! | GGATCCCTATTTTTATTTTT+TGG | + | chr8.1:18902064-18902083 | MS.gene56947:intron | 25.0% |
| !!! | GTTTTTTAAAAAAGCGTGTT+AGG | - | chr8.1:18903411-18903430 | None:intergenic | 25.0% |
| !!! | TGGCTAAAATTTTAAGAATC+AGG | - | chr8.1:18900377-18900396 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTCAAATTCTGCT+AGG | - | chr8.1:18903565-18903584 | None:intergenic | 25.0% |
| AAAGAAAATCATAAACCCTG+CGG | - | chr8.1:18905296-18905315 | None:intergenic | 30.0% | |
| AACAAAAACAAACACCTTTC+TGG | - | chr8.1:18905205-18905224 | None:intergenic | 30.0% | |
| AAGAATGAAGCAAAAAAAGC+AGG | - | chr8.1:18902119-18902138 | None:intergenic | 30.0% | |
| AAGAGAAGTAGGAATTAACA+CGG | - | chr8.1:18901508-18901527 | None:intergenic | 30.0% | |
| ATATTAATTTATGGTTGGGG+AGG | + | chr8.1:18904518-18904537 | MS.gene56947:intron | 30.0% | |
| ATCAACTTTGCACAATTCAT+AGG | - | chr8.1:18901922-18901941 | None:intergenic | 30.0% | |
| ATTCTGTTATCAGGATTGTT+TGG | + | chr8.1:18905085-18905104 | MS.gene56947:CDS | 30.0% | |
| ATTGCTAGTATTTGTTTCAC+AGG | + | chr8.1:18902727-18902746 | MS.gene56947:CDS | 30.0% | |
| CAAATAGTATTAGGGTTTAG+CGG | + | chr8.1:18902208-18902227 | MS.gene56947:CDS | 30.0% | |
| CAACCCTTCAAATAGTATTA+GGG | + | chr8.1:18902200-18902219 | MS.gene56947:CDS | 30.0% | |
| CAGAATATGACATTAGATTC+TGG | + | chr8.1:18902026-18902045 | MS.gene56947:intron | 30.0% | |
| CCACTTTGAATATCATTTGT+AGG | + | chr8.1:18906079-18906098 | MS.gene56947:intron | 30.0% | |
| CCTACAAATGATATTCAAAG+TGG | - | chr8.1:18906082-18906101 | None:intergenic | 30.0% | |
| GAAATTCAAGAAGATAATGC+GGG | + | chr8.1:18902150-18902169 | MS.gene56947:intron | 30.0% | |
| GATGTAACTATACCAAATAG+AGG | + | chr8.1:18904548-18904567 | MS.gene56947:intron | 30.0% | |
| GCCATAGATATATTGGAAAA+TGG | + | chr8.1:18900393-18900412 | MS.gene56947:intron | 30.0% | |
| GCTCTTATGAATATGTTATC+AGG | + | chr8.1:18904127-18904146 | MS.gene56947:intron | 30.0% | |
| GTAGAGGTAATTCCTTTATT+TGG | + | chr8.1:18903958-18903977 | MS.gene56947:intron | 30.0% | |
| GTTATGCAGTAAGAAACATT+TGG | - | chr8.1:18900289-18900308 | None:intergenic | 30.0% | |
| TACTATATCATTGAACTGCA+AGG | - | chr8.1:18906445-18906464 | None:intergenic | 30.0% | |
| TAGATCAGTATTCCTCTATT+TGG | - | chr8.1:18904563-18904582 | None:intergenic | 30.0% | |
| TCAAAATCTCTATGATCATG+TGG | - | chr8.1:18905358-18905377 | None:intergenic | 30.0% | |
| TCAACCCTTCAAATAGTATT+AGG | + | chr8.1:18902199-18902218 | MS.gene56947:CDS | 30.0% | |
| TCTTTCTATAAACTCTTTCC+TGG | + | chr8.1:18900476-18900495 | MS.gene56947:intron | 30.0% | |
| TTCTCATACAATACCTCTAT+AGG | - | chr8.1:18901891-18901910 | None:intergenic | 30.0% | |
| TTGAAAATAGGGCTCAAAAT+TGG | - | chr8.1:18900971-18900990 | None:intergenic | 30.0% | |
| TTGAATATCATTTGTAGGCT+CGG | + | chr8.1:18906084-18906103 | MS.gene56947:intron | 30.0% | |
| TTTATGCTCTGTTCAGATTA+TGG | - | chr8.1:18901992-18902011 | None:intergenic | 30.0% | |
| TTTCCTTATAGTGAAAATGC+TGG | + | chr8.1:18905223-18905242 | MS.gene56947:intron | 30.0% | |
| ! | AAAATGACGCATTTTGTCAT+AGG | + | chr8.1:18903255-18903274 | MS.gene56947:intron | 30.0% |
| ! | AAATGACGCATTTTGTCATA+GGG | + | chr8.1:18903256-18903275 | MS.gene56947:intron | 30.0% |
| ! | ATGATATTGATGACAGGATA+TGG | - | chr8.1:18901302-18901321 | None:intergenic | 30.0% |
| ! | CATGTACGTTTTATGCATAT+TGG | + | chr8.1:18906392-18906411 | MS.gene56947:intron | 30.0% |
| ! | GGCTGAATTTGTTTCTTAAA+TGG | + | chr8.1:18904359-18904378 | MS.gene56947:intron | 30.0% |
| ! | GTTGACTATTTAGAACTACA+TGG | + | chr8.1:18903097-18903116 | MS.gene56947:intron | 30.0% |
| ! | TACACAGCAATAAATGGTTT+TGG | + | chr8.1:18906214-18906233 | MS.gene56947:CDS | 30.0% |
| ! | TATGCTTTTATTCTCACTGT+TGG | + | chr8.1:18902970-18902989 | MS.gene56947:CDS | 30.0% |
| ! | TATTTTTCTCAAACTACACC+AGG | - | chr8.1:18900497-18900516 | None:intergenic | 30.0% |
| ! | TGTACATTTTATCTGTGTCA+GGG | + | chr8.1:18905055-18905074 | MS.gene56947:intron | 30.0% |
| ! | TTCTGGTGCTAAATAAATGT+TGG | + | chr8.1:18902043-18902062 | MS.gene56947:intron | 30.0% |
| ! | TTTAGGACCAAGTTTGTATT+AGG | + | chr8.1:18906145-18906164 | MS.gene56947:CDS | 30.0% |
| !! | AAGTACTGATAAAACTTTCC+AGG | - | chr8.1:18904322-18904341 | None:intergenic | 30.0% |
| !! | ATTTTGTCATAGGGTGTTAT+GGG | + | chr8.1:18903265-18903284 | MS.gene56947:intron | 30.0% |
| !! | GATGACATTCTGAAATTATC+TGG | + | chr8.1:18904725-18904744 | MS.gene56947:intron | 30.0% |
| !! | GATTTGTTAACAATGGTTGA+TGG | + | chr8.1:18902855-18902874 | MS.gene56947:intron | 30.0% |
| !! | GCCATTTTCCAATATATCTA+TGG | - | chr8.1:18900397-18900416 | None:intergenic | 30.0% |
| !! | GGAAAGTTTTATCAGTACTT+TGG | + | chr8.1:18904322-18904341 | MS.gene56947:intron | 30.0% |
| !! | GGAACAAGATTTGTTAACAA+TGG | + | chr8.1:18902848-18902867 | MS.gene56947:intron | 30.0% |
| !! | TCAATTTTGATACCTGGATT+TGG | + | chr8.1:18902661-18902680 | MS.gene56947:intron | 30.0% |
| !! | TCCTTTTGAACTTCTTGTTT+TGG | + | chr8.1:18901001-18901020 | MS.gene56947:intron | 30.0% |
| !! | TTGTTTTTCCAAATTCTGCT+AGG | - | chr8.1:18903649-18903668 | None:intergenic | 30.0% |
| !!! | AGTCCATGTTTTTTTTTTGC+AGG | + | chr8.1:18901698-18901717 | MS.gene56947:intron | 30.0% |
| !!! | GAGCTTTTATTGCTGTTTAT+CGG | + | chr8.1:18904878-18904897 | MS.gene56947:CDS | 30.0% |
| AAACCAACAAGAGATACCAA+AGG | - | chr8.1:18902550-18902569 | None:intergenic | 35.0% | |
| AACAAAGGATGTCATCATCA+TGG | - | chr8.1:18903932-18903951 | None:intergenic | 35.0% | |
| AACGAGTACACAGCAATAAA+TGG | + | chr8.1:18906208-18906227 | MS.gene56947:CDS | 35.0% | |
| AAGCTCTATATATAGAGCCT+GGG | + | chr8.1:18905672-18905691 | MS.gene56947:intron | 35.0% | |
| AAGTTGAGCTTGCATCATTT+GGG | - | chr8.1:18902492-18902511 | None:intergenic | 35.0% | |
| AATAATCAGCCATGATGCTA+AGG | - | chr8.1:18904257-18904276 | None:intergenic | 35.0% | |
| AATACTAGCAATACAAGCTC+TGG | - | chr8.1:18902719-18902738 | None:intergenic | 35.0% | |
| AATTCTTGAACCTTAGAGCA+TGG | + | chr8.1:18903758-18903777 | MS.gene56947:intron | 35.0% | |
| ACAATATCGATCATTCTTGC+TGG | + | chr8.1:18901843-18901862 | MS.gene56947:CDS | 35.0% | |
| ACTTCTTGTGTCAGTCTTAA+AGG | - | chr8.1:18906595-18906614 | None:intergenic | 35.0% | |
| ACTTGGTCCTAAAACTATTG+AGG | - | chr8.1:18906138-18906157 | None:intergenic | 35.0% | |
| AGAATGATCGATATTGTTGC+TGG | - | chr8.1:18901840-18901859 | None:intergenic | 35.0% | |
| AGTTCCGTATCCATTTCAAT+GGG | + | chr8.1:18903873-18903892 | MS.gene56947:CDS | 35.0% | |
| ATCTTTCTTATGCTCCACTT+TGG | - | chr8.1:18902320-18902339 | None:intergenic | 35.0% | |
| ATGTTGGAAACCAAGAAGTA+TGG | - | chr8.1:18901463-18901482 | None:intergenic | 35.0% | |
| CAACATTATCTTGTGATGCT+GGG | + | chr8.1:18901477-18901496 | MS.gene56947:CDS | 35.0% | |
| CCGTGAACAAAACAGAAAAA+CGG | - | chr8.1:18902933-18902952 | None:intergenic | 35.0% | |
| CCTCCTGCAAAAAAAAAACA+TGG | - | chr8.1:18901704-18901723 | None:intergenic | 35.0% | |
| CTTAAATGGCAATTGCAACA+CGG | + | chr8.1:18904373-18904392 | MS.gene56947:intron | 35.0% | |
| GAATCAACCTCTTTCTTTCT+CGG | + | chr8.1:18901343-18901362 | MS.gene56947:intron | 35.0% | |
| GATAGATAAACCCAAGAAGA+TGG | - | chr8.1:18906176-18906195 | None:intergenic | 35.0% | |
| GCCAAAACAAGAAGTTCAAA+AGG | - | chr8.1:18901005-18901024 | None:intergenic | 35.0% | |
| GTAGATATGACTGATACATC+TGG | + | chr8.1:18901379-18901398 | MS.gene56947:intron | 35.0% | |
| GTATTATCAGTGATGCTTTG+TGG | + | chr8.1:18903314-18903333 | MS.gene56947:intron | 35.0% | |
| GTGAAGAAAAATTCACTCGA+GGG | + | chr8.1:18904638-18904657 | MS.gene56947:intron | 35.0% | |
| GTTCTTACTTTGCATGTGAT+TGG | + | chr8.1:18900936-18900955 | MS.gene56947:intron | 35.0% | |
| TAATTGCCGTGTTTGTATGA+AGG | + | chr8.1:18900876-18900895 | MS.gene56947:intron | 35.0% | |
| TACAATACCTCTATAGGATC+CGG | - | chr8.1:18901885-18901904 | None:intergenic | 35.0% | |
| TATCCAAACACTACTCTTTG+TGG | + | chr8.1:18901737-18901756 | MS.gene56947:CDS | 35.0% | |
| TCTCATGAATAAGTACGAGT+TGG | - | chr8.1:18905740-18905759 | None:intergenic | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr8.1:18905543-18905562 | MS.gene56947:intron | 35.0% | |
| TGAATATCATTTGTAGGCTC+GGG | + | chr8.1:18906085-18906104 | MS.gene56947:intron | 35.0% | |
| TGATATGTCATATGCTTGCT+GGG | + | chr8.1:18901938-18901957 | MS.gene56947:intron | 35.0% | |
| TGCTTGTTCTTTGCTTATGT+CGG | + | chr8.1:18905970-18905989 | MS.gene56947:CDS | 35.0% | |
| TGGAGTTGTTGCATATTTCT+TGG | + | chr8.1:18906497-18906516 | MS.gene56947:CDS | 35.0% | |
| TGTACGTTTAACGTGGTTAT+AGG | - | chr8.1:18903001-18903020 | None:intergenic | 35.0% | |
| TGTGAAGAAAAATTCACTCG+AGG | + | chr8.1:18904637-18904656 | MS.gene56947:intron | 35.0% | |
| TTAAATGGCAATTGCAACAC+GGG | + | chr8.1:18904374-18904393 | MS.gene56947:intron | 35.0% | |
| TTGATATGTCATATGCTTGC+TGG | + | chr8.1:18901937-18901956 | MS.gene56947:intron | 35.0% | |
| ! | ACTTTCTTGGTCTTCATATG+TGG | + | chr8.1:18902283-18902302 | MS.gene56947:intron | 35.0% |
| ! | AGACCAGCATTTTCACTATA+AGG | - | chr8.1:18905229-18905248 | None:intergenic | 35.0% |
| ! | CTGTACATTTTATCTGTGTC+AGG | + | chr8.1:18905054-18905073 | MS.gene56947:intron | 35.0% |
| ! | CTTTTATTCTCACTGTTGGA+GGG | + | chr8.1:18902974-18902993 | MS.gene56947:CDS | 35.0% |
| ! | GACAACTGACTTTAGTGAAA+TGG | + | chr8.1:18904194-18904213 | MS.gene56947:intron | 35.0% |
| ! | GACTTGAGAGTATGATAGAA+AGG | + | chr8.1:18905398-18905417 | MS.gene56947:intron | 35.0% |
| ! | TCTGCAACCTCAATAGTTTT+AGG | + | chr8.1:18906128-18906147 | MS.gene56947:CDS | 35.0% |
| ! | TGGCTGTGTTATTACTTTCT+TGG | + | chr8.1:18902270-18902289 | MS.gene56947:intron | 35.0% |
| ! | TTATCAGGATTGTTTGGAAC+CGG | + | chr8.1:18905091-18905110 | MS.gene56947:CDS | 35.0% |
| ! | TTGATGACAGGATATGGTAA+TGG | - | chr8.1:18901296-18901315 | None:intergenic | 35.0% |
| ! | TTTGTTGTCATTTGACCGTA+AGG | + | chr8.1:18905493-18905512 | MS.gene56947:intron | 35.0% |
| ! | TTTTATTCTCACTGTTGGAG+GGG | + | chr8.1:18902975-18902994 | MS.gene56947:CDS | 35.0% |
| !! | AAAATTCAAGTTGGGGATAG+TGG | + | chr8.1:18904490-18904509 | MS.gene56947:intron | 35.0% |
| !! | ACGAAAGCTTTTGATTGGAA+CGG | - | chr8.1:18906474-18906493 | None:intergenic | 35.0% |
| !! | CATTTTGTCATAGGGTGTTA+TGG | + | chr8.1:18903264-18903283 | MS.gene56947:intron | 35.0% |
| !! | CCGTTTTTCTGTTTTGTTCA+CGG | + | chr8.1:18902930-18902949 | MS.gene56947:CDS | 35.0% |
| !! | CTTTCTAGCATTGGTTTCTA+TGG | + | chr8.1:18902827-18902846 | MS.gene56947:intron | 35.0% |
| !! | TATCTTTTAAAAGGGCAACC+CGG | - | chr8.1:18905635-18905654 | None:intergenic | 35.0% |
| !! | TTTTGTCATAGGGTGTTATG+GGG | + | chr8.1:18903266-18903285 | MS.gene56947:intron | 35.0% |
| !!! | CCATGTTTTTTTTTTGCAGG+AGG | + | chr8.1:18901701-18901720 | MS.gene56947:intron | 35.0% |
| !!! | TAGTGAAAATGCTGGTCTTT+TGG | + | chr8.1:18905231-18905250 | MS.gene56947:intron | 35.0% |
| !!! | TGGTATCTCTTGTTGGTTTT+GGG | + | chr8.1:18902551-18902570 | MS.gene56947:CDS | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr8.1:18905544-18905563 | None:intergenic | 35.0% |
| !!! | TTGGTATCTCTTGTTGGTTT+TGG | + | chr8.1:18902550-18902569 | MS.gene56947:CDS | 35.0% |
| AAGGCTTGTGAATATGACAC+GGG | - | chr8.1:18906361-18906380 | None:intergenic | 40.0% | |
| AATCTGGTACCTTAGCATCA+TGG | + | chr8.1:18904245-18904264 | MS.gene56947:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr8.1:18905537-18905556 | MS.gene56947:intron | 40.0% | |
| ACATTGGTGCAAACGTTGTT+TGG | + | chr8.1:18901771-18901790 | MS.gene56947:CDS | 40.0% | |
| ACATTTGGAAGCTGATCCTT+CGG | - | chr8.1:18900274-18900293 | None:intergenic | 40.0% | |
| ACTCATGACTTAATCGCTGA+AGG | - | chr8.1:18900645-18900664 | None:intergenic | 40.0% | |
| AGATACAGAAGATCCAATGC+CGG | - | chr8.1:18905113-18905132 | None:intergenic | 40.0% | |
| AGCTCTATATATAGAGCCTG+GGG | + | chr8.1:18905673-18905692 | MS.gene56947:intron | 40.0% | |
| AGTCACACTTCACTTATCTC+CGG | - | chr8.1:18900826-18900845 | None:intergenic | 40.0% | |
| AGTGAGTGCATCACAACTTA+AGG | - | chr8.1:18903165-18903184 | None:intergenic | 40.0% | |
| ATCCTTTGTTGCTCTAGTAG+AGG | + | chr8.1:18903942-18903961 | MS.gene56947:CDS | 40.0% | |
| ATGAAATCCACAACTCACCA+TGG | - | chr8.1:18903072-18903091 | None:intergenic | 40.0% | |
| ATGCTCTGTTCAGATTATGG+CGG | - | chr8.1:18901989-18902008 | None:intergenic | 40.0% | |
| ATGTAAAGTAACTCACGCCA+AGG | - | chr8.1:18900322-18900341 | None:intergenic | 40.0% | |
| ATTAGGCTTCTCCATCTTCT+TGG | + | chr8.1:18906162-18906181 | MS.gene56947:CDS | 40.0% | |
| ATTGGTTACATGCAGTCTAG+TGG | + | chr8.1:18904856-18904875 | MS.gene56947:intron | 40.0% | |
| CAAGCTCAACTTCTTTCTTC+AGG | + | chr8.1:18902500-18902519 | MS.gene56947:intron | 40.0% | |
| CAAGGCTTGTGAATATGACA+CGG | - | chr8.1:18906362-18906381 | None:intergenic | 40.0% | |
| CAATCAAAAGCTTTCGTTGC+TGG | + | chr8.1:18906477-18906496 | MS.gene56947:CDS | 40.0% | |
| CAATTTGCAATCGAGAATGC+TGG | + | chr8.1:18903695-18903714 | MS.gene56947:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr8.1:18905538-18905557 | MS.gene56947:intron | 40.0% | |
| CAGTCTAACCTAGCAGAATT+TGG | + | chr8.1:18903554-18903573 | MS.gene56947:intron | 40.0% | |
| CATCACAACTTAAGGACACT+GGG | - | chr8.1:18903157-18903176 | None:intergenic | 40.0% | |
| CCAACATTATCTTGTGATGC+TGG | + | chr8.1:18901476-18901495 | MS.gene56947:CDS | 40.0% | |
| CCAAGTCCTTCATACAAACA+CGG | - | chr8.1:18900885-18900904 | None:intergenic | 40.0% | |
| CCAGCATCACAAGATAATGT+TGG | - | chr8.1:18901479-18901498 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr8.1:18905569-18905588 | MS.gene56947:intron | 40.0% | |
| CGTACATGACAAGAAACTCA+AGG | - | chr8.1:18906380-18906399 | None:intergenic | 40.0% | |
| CTAAAATTTGGCCTGACACA+TGG | + | chr8.1:18904684-18904703 | MS.gene56947:intron | 40.0% | |
| CTTTGCATGTGATTGGAAGT+TGG | + | chr8.1:18900943-18900962 | MS.gene56947:intron | 40.0% | |
| GAAGCTCTATATATAGAGCC+TGG | + | chr8.1:18905671-18905690 | MS.gene56947:intron | 40.0% | |
| GAAGTTGAGCTTGCATCATT+TGG | - | chr8.1:18902493-18902512 | None:intergenic | 40.0% | |
| GAGTTCCGTATCCATTTCAA+TGG | + | chr8.1:18903872-18903891 | MS.gene56947:CDS | 40.0% | |
| GCTTCCTTTCCTAAGTGAAA+TGG | + | chr8.1:18900698-18900717 | MS.gene56947:intron | 40.0% | |
| GGAGAAGCCTAATACAAACT+TGG | - | chr8.1:18906155-18906174 | None:intergenic | 40.0% | |
| GTAGTTAGTTAATTTCCCCC+AGG | - | chr8.1:18905779-18905798 | None:intergenic | 40.0% | |
| GTTCCGTATCCATTTCAATG+GGG | + | chr8.1:18903874-18903893 | MS.gene56947:CDS | 40.0% | |
| GTTCCTTTGGTATCTCTTGT+TGG | + | chr8.1:18902544-18902563 | MS.gene56947:CDS | 40.0% | |
| GTTGCTAAGTGTGTAGAGAT+TGG | + | chr8.1:18902689-18902708 | MS.gene56947:CDS | 40.0% | |
| TACCACCATCCATTCTTAGT+CGG | + | chr8.1:18904920-18904939 | MS.gene56947:CDS | 40.0% | |
| TACCTCTACTAGAGCAACAA+AGG | - | chr8.1:18903947-18903966 | None:intergenic | 40.0% | |
| TATTAGGGTTTAGCGGTCTT+TGG | + | chr8.1:18902215-18902234 | MS.gene56947:CDS | 40.0% | |
| TCTATACTTAGCAAGGCATG+TGG | + | chr8.1:18900576-18900595 | MS.gene56947:intron | 40.0% | |
| TGCTTTGTGGAGTTGAGAAT+CGG | + | chr8.1:18903327-18903346 | MS.gene56947:intron | 40.0% | |
| TGTATGAGTTAGGCTTTCCT+GGG | + | chr8.1:18902575-18902594 | MS.gene56947:CDS | 40.0% | |
| TTAGGCTTCTCCATCTTCTT+GGG | + | chr8.1:18906163-18906182 | MS.gene56947:CDS | 40.0% | |
| TTCGTTAGTTAATTTCCCCC+AGG | - | chr8.1:18905692-18905711 | None:intergenic | 40.0% | |
| TTGAAGGAAAGATGCGTACT+TGG | - | chr8.1:18905865-18905884 | None:intergenic | 40.0% | |
| ! | AAAAATCTAGGGCTGAAGTC+AGG | + | chr8.1:18904288-18904307 | MS.gene56947:intron | 40.0% |
| ! | CAGCAACGAAAGCTTTTGAT+TGG | - | chr8.1:18906479-18906498 | None:intergenic | 40.0% |
| ! | CGAAGACATGTTTTCCTGAA+TGG | - | chr8.1:18902909-18902928 | None:intergenic | 40.0% |
| ! | CTAAGAATGGATGGTGGTAA+TGG | - | chr8.1:18904919-18904938 | None:intergenic | 40.0% |
| ! | GCTTTTATTCTCACTGTTGG+AGG | + | chr8.1:18902973-18902992 | MS.gene56947:CDS | 40.0% |
| ! | TCAAAAGCATGAATGGCTTG+TGG | - | chr8.1:18906022-18906041 | None:intergenic | 40.0% |
| ! | TCATTGGGATTTTGGATTGC+AGG | + | chr8.1:18903845-18903864 | MS.gene56947:intron | 40.0% |
| ! | TGCAGTCGACAACTTTTGAT+TGG | + | chr8.1:18901240-18901259 | MS.gene56947:intron | 40.0% |
| ! | TGTATGAAGGACTTGGTTTC+TGG | + | chr8.1:18900889-18900908 | MS.gene56947:intron | 40.0% |
| ! | TTTGTCATAGGGTGTTATGG+GGG | + | chr8.1:18903267-18903286 | MS.gene56947:intron | 40.0% |
| ! | TTTTATCTGTGTCAGGGTGT+CGG | + | chr8.1:18905061-18905080 | MS.gene56947:intron | 40.0% |
| ! | TTTTCCTGAATGGAGCACAT+GGG | - | chr8.1:18902899-18902918 | None:intergenic | 40.0% |
| !! | AGGTTGGTCTCAAGTTTAAG+TGG | + | chr8.1:18902250-18902269 | MS.gene56947:intron | 40.0% |
| !! | TGAAATGGCGCTGGTTAATT+TGG | + | chr8.1:18900713-18900732 | MS.gene56947:intron | 40.0% |
| !! | TGTACTCGTTGAAGTACTGT+GGG | - | chr8.1:18906198-18906217 | None:intergenic | 40.0% |
| !! | TTGATACCTGGATTTGGTGT+AGG | + | chr8.1:18902667-18902686 | MS.gene56947:intron | 40.0% |
| !!! | TGAAGTCAGGTTTTTAGTCC+TGG | + | chr8.1:18904301-18904320 | MS.gene56947:intron | 40.0% |
| ACACCTGACTGATACTTGAC+CGG | + | chr8.1:18900804-18900823 | MS.gene56947:intron | 45.0% | |
| ACCAATACCCCGACTAAGAA+TGG | - | chr8.1:18904932-18904951 | None:intergenic | 45.0% | |
| ACCACCATCCATTCTTAGTC+GGG | + | chr8.1:18904921-18904940 | MS.gene56947:CDS | 45.0% | |
| ACCATGGAGCAGCATCTATT+AGG | - | chr8.1:18903056-18903075 | None:intergenic | 45.0% | |
| ACTTCTCTTGTTCCCCAGAT+GGG | + | chr8.1:18901519-18901538 | MS.gene56947:CDS | 45.0% | |
| AGAGTGGTTCAAATATCCGC+AGG | + | chr8.1:18905277-18905296 | MS.gene56947:CDS | 45.0% | |
| AGCGCCATTTCACTTAGGAA+AGG | - | chr8.1:18900705-18900724 | None:intergenic | 45.0% | |
| AGGCTTGTGAATATGACACG+GGG | - | chr8.1:18906360-18906379 | None:intergenic | 45.0% | |
| ATAAGAGCCTCCGATTACTG+CGG | - | chr8.1:18901808-18901827 | None:intergenic | 45.0% | |
| ATACCCCGACTAAGAATGGA+TGG | - | chr8.1:18904928-18904947 | None:intergenic | 45.0% | |
| ATACTTAGCAAGGCATGTGG+AGG | + | chr8.1:18900579-18900598 | MS.gene56947:intron | 45.0% | |
| ATATCATTTGTAGGCTCGGG+AGG | + | chr8.1:18906088-18906107 | MS.gene56947:intron | 45.0% | |
| ATCTGGGGAACAAGAGAAGT+AGG | - | chr8.1:18901519-18901538 | None:intergenic | 45.0% | |
| CAAACACTACTCTTTGTGGC+TGG | + | chr8.1:18901741-18901760 | MS.gene56947:CDS | 45.0% | |
| CAAATTCACCAATTGCGCCA+AGG | - | chr8.1:18905477-18905496 | None:intergenic | 45.0% | |
| CAGCCACAAAGAGTAGTGTT+TGG | - | chr8.1:18901743-18901762 | None:intergenic | 45.0% | |
| CAGTATAGTGCAGCGACAAT+GGG | - | chr8.1:18905952-18905971 | None:intergenic | 45.0% | |
| CCGTGTTTGTATGAAGGACT+TGG | + | chr8.1:18900882-18900901 | MS.gene56947:intron | 45.0% | |
| CGATATTGTTGCTGGAACGA+AGG | - | chr8.1:18901832-18901851 | None:intergenic | 45.0% | |
| CTAGAGACCGAGAAAGAAAG+AGG | - | chr8.1:18901353-18901372 | None:intergenic | 45.0% | |
| CTCTTTCTTTCTCGGTCTCT+AGG | + | chr8.1:18901351-18901370 | MS.gene56947:intron | 45.0% | |
| CTGTATGAGTTAGGCTTTCC+TGG | + | chr8.1:18902574-18902593 | MS.gene56947:CDS | 45.0% | |
| CTTCGCCTGCATCAAATGAA+GGG | - | chr8.1:18903903-18903922 | None:intergenic | 45.0% | |
| GAGTGGTTCAAATATCCGCA+GGG | + | chr8.1:18905278-18905297 | MS.gene56947:CDS | 45.0% | |
| GCACCCCATTGAAATGGATA+CGG | - | chr8.1:18903880-18903899 | None:intergenic | 45.0% | |
| GCATCACAACTTAAGGACAC+TGG | - | chr8.1:18903158-18903177 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr8.1:18905568-18905587 | MS.gene56947:intron | 45.0% | |
| GCTCTATATATAGAGCCTGG+GGG | + | chr8.1:18905674-18905693 | MS.gene56947:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr8.1:18905565-18905584 | MS.gene56947:intron | 45.0% | |
| GGATGTCATCATCATGGCAA+AGG | - | chr8.1:18903926-18903945 | None:intergenic | 45.0% | |
| GGTTGTGGTTCATCTGCTTT+CGG | - | chr8.1:18900244-18900263 | None:intergenic | 45.0% | |
| GTAAATGAGAGGGGTAACCT+TGG | + | chr8.1:18905457-18905476 | MS.gene56947:intron | 45.0% | |
| GTATGAGTTAGGCTTTCCTG+GGG | + | chr8.1:18902576-18902595 | MS.gene56947:CDS | 45.0% | |
| GTCATTTGACCGTAAGGTCA+CGG | + | chr8.1:18905499-18905518 | MS.gene56947:intron | 45.0% | |
| GTCTTTGGCGAAATGTTGCA+AGG | + | chr8.1:18902230-18902249 | MS.gene56947:CDS | 45.0% | |
| TAAAGTAACTCACGCCAAGG+TGG | - | chr8.1:18900319-18900338 | None:intergenic | 45.0% | |
| TAACCAGCGCCATTTCACTT+AGG | - | chr8.1:18900710-18900729 | None:intergenic | 45.0% | |
| TACTTCTCTTGTTCCCCAGA+TGG | + | chr8.1:18901518-18901537 | MS.gene56947:CDS | 45.0% | |
| TAGCAACCTACACCAAATCC+AGG | - | chr8.1:18902676-18902695 | None:intergenic | 45.0% | |
| TCATTTGACCGTAAGGTCAC+GGG | + | chr8.1:18905500-18905519 | MS.gene56947:intron | 45.0% | |
| TCCATTCTTAGTCGGGGTAT+TGG | + | chr8.1:18904928-18904947 | MS.gene56947:CDS | 45.0% | |
| TCTGCGTTGTACGTTTAACG+TGG | - | chr8.1:18903008-18903027 | None:intergenic | 45.0% | |
| TCTGCTATTCGGAAAGACAG+AGG | + | chr8.1:18906543-18906562 | MS.gene56947:CDS | 45.0% | |
| TCTGTTGTGTCCATGCTCTA+AGG | - | chr8.1:18903771-18903790 | None:intergenic | 45.0% | |
| TGCATTGCAGCAAGACATCT+AGG | + | chr8.1:18904151-18904170 | MS.gene56947:intron | 45.0% | |
| TGGCTTGAACATGTCCAAAG+TGG | + | chr8.1:18902303-18902322 | MS.gene56947:intron | 45.0% | |
| TGTGGCTGGAATCAACACAT+TGG | + | chr8.1:18901755-18901774 | MS.gene56947:CDS | 45.0% | |
| TGTTCACGGTTGCAATTGTG+TGG | + | chr8.1:18902944-18902963 | MS.gene56947:CDS | 45.0% | |
| TTAGGCCTGAACTATCAGTG+CGG | - | chr8.1:18903038-18903057 | None:intergenic | 45.0% | |
| TTCGCCTGCATCAAATGAAG+GGG | - | chr8.1:18903902-18903921 | None:intergenic | 45.0% | |
| TTGGCGAAATGTTGCAAGGT+TGG | + | chr8.1:18902234-18902253 | MS.gene56947:intron | 45.0% | |
| TTTCCTAAGTGAAATGGCGC+TGG | + | chr8.1:18900704-18900723 | MS.gene56947:intron | 45.0% | |
| TTTCCTGAATGGAGCACATG+GGG | - | chr8.1:18902898-18902917 | None:intergenic | 45.0% | |
| ! | GGAAAGACAGAGGAAAGCAT+TGG | + | chr8.1:18906553-18906572 | MS.gene56947:CDS | 45.0% |
| ! | GTTTTCCTGAATGGAGCACA+TGG | - | chr8.1:18902900-18902919 | None:intergenic | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr8.1:18905533-18905552 | None:intergenic | 45.0% |
| !! | AAGACAGAGGAAAGCATTGG+TGG | + | chr8.1:18906556-18906575 | MS.gene56947:CDS | 45.0% |
| !! | ACACCTTTCTGGAGTCAACA+AGG | - | chr8.1:18905194-18905213 | None:intergenic | 45.0% |
| !! | AGACAGAGGAAAGCATTGGT+GGG | + | chr8.1:18906557-18906576 | MS.gene56947:CDS | 45.0% |
| !! | AGCATTGGTGGGATAAGTAC+AGG | + | chr8.1:18906568-18906587 | MS.gene56947:CDS | 45.0% |
| !! | AGCGTGTTAGGAGCATTTCT+CGG | - | chr8.1:18903399-18903418 | None:intergenic | 45.0% |
| !! | ATTCAAGTTGGGGATAGTGG+AGG | + | chr8.1:18904493-18904512 | MS.gene56947:intron | 45.0% |
| !! | CATCCTTGTTGACTCCAGAA+AGG | + | chr8.1:18905188-18905207 | MS.gene56947:intron | 45.0% |
| !! | GTGTACTCGTTGAAGTACTG+TGG | - | chr8.1:18906199-18906218 | None:intergenic | 45.0% |
| !! | TTCTTAGTCGGGGTATTGGT+TGG | + | chr8.1:18904932-18904951 | MS.gene56947:CDS | 45.0% |
| !!! | GGTTTTGGGCTGTATGAGTT+AGG | + | chr8.1:18902565-18902584 | MS.gene56947:CDS | 45.0% |
| !! | AAATTAAATTAATATTCTTA+AGG | + | chr8.1:18901564-18901583 | MS.gene56947:intron | 5.0% |
| AAGATAATGCGGGCAACCCA+AGG | + | chr8.1:18902160-18902179 | MS.gene56947:CDS | 50.0% | |
| AATATGACACGGGGCACATG+GGG | - | chr8.1:18906351-18906370 | None:intergenic | 50.0% | |
| ACCAAAGGAACTGCTGAGAG+TGG | - | chr8.1:18902535-18902554 | None:intergenic | 50.0% | |
| AGTTCACACCGGAGCAAGAT+GGG | + | chr8.1:18906240-18906259 | MS.gene56947:CDS | 50.0% | |
| ATAGTGCAGCGACAATGGGA+GGG | - | chr8.1:18905948-18905967 | None:intergenic | 50.0% | |
| CAGCAACACTACCATGTGTC+AGG | - | chr8.1:18904698-18904717 | None:intergenic | 50.0% | |
| CCACCATCCATTCTTAGTCG+GGG | + | chr8.1:18904922-18904941 | MS.gene56947:CDS | 50.0% | |
| GAATATGACACGGGGCACAT+GGG | - | chr8.1:18906352-18906371 | None:intergenic | 50.0% | |
| GACTTGAACCCGTGACCTTA+CGG | - | chr8.1:18905511-18905530 | None:intergenic | 50.0% | |
| GCAGTATAGTGCAGCGACAA+TGG | - | chr8.1:18905953-18905972 | None:intergenic | 50.0% | |
| GCATAACAAGTCCTCCACCT+TGG | + | chr8.1:18900302-18900321 | MS.gene56947:CDS | 50.0% | |
| GCCTAATAGATGCTGCTCCA+TGG | + | chr8.1:18903052-18903071 | MS.gene56947:CDS | 50.0% | |
| GCTTCGCCTGCATCAAATGA+AGG | - | chr8.1:18903904-18903923 | None:intergenic | 50.0% | |
| TAAGAGCCTCCGATTACTGC+GGG | - | chr8.1:18901807-18901826 | None:intergenic | 50.0% | |
| TACATTGCCACCTCCCATCT+GGG | - | chr8.1:18901535-18901554 | None:intergenic | 50.0% | |
| TATAGTGCAGCGACAATGGG+AGG | - | chr8.1:18905949-18905968 | None:intergenic | 50.0% | |
| TCCACTCTCAGCAGTTCCTT+TGG | + | chr8.1:18902531-18902550 | MS.gene56947:CDS | 50.0% | |
| TCTCCGGTCAAGTATCAGTC+AGG | - | chr8.1:18900810-18900829 | None:intergenic | 50.0% | |
| TGAATATGACACGGGGCACA+TGG | - | chr8.1:18906353-18906372 | None:intergenic | 50.0% | |
| TTACATTGCCACCTCCCATC+TGG | - | chr8.1:18901536-18901555 | None:intergenic | 50.0% | |
| TTTGGAAGCTGATCCTTCGG+TGG | - | chr8.1:18900271-18900290 | None:intergenic | 50.0% | |
| ! | AAGCGACAATTAGAGCGCCT+TGG | - | chr8.1:18902180-18902199 | None:intergenic | 50.0% |
| ! | ACTTGCCGCACTGATAGTTC+AGG | + | chr8.1:18903030-18903049 | MS.gene56947:CDS | 50.0% |
| ! | AGCGACAATTAGAGCGCCTT+GGG | - | chr8.1:18902179-18902198 | None:intergenic | 50.0% |
| ! | GGATTGTTTGGAACCGGCAT+TGG | + | chr8.1:18905097-18905116 | MS.gene56947:CDS | 50.0% |
| ! | TGGTCGATTCAATGACGAGC+CGG | + | chr8.1:18901863-18901882 | MS.gene56947:CDS | 50.0% |
| !! | GCGCTGGTTAATTTGGACTC+TGG | + | chr8.1:18900720-18900739 | MS.gene56947:intron | 50.0% |
| !! | GGTGTCGGCATTCTGTTATC+AGG | + | chr8.1:18905076-18905095 | MS.gene56947:CDS | 50.0% |
| !! | GGTTTTGGTCCAGTTCACAC+CGG | + | chr8.1:18906229-18906248 | MS.gene56947:CDS | 50.0% |
| !!! | CTTTTGGCTTTGACACGCGT+CGG | + | chr8.1:18905247-18905266 | MS.gene56947:CDS | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr8.1:18905512-18905531 | MS.gene56947:intron | 55.0% | |
| ACACCGGAGCAAGATGGGTA+TGG | + | chr8.1:18906245-18906264 | MS.gene56947:intron | 55.0% | |
| ACATTGCCACCTCCCATCTG+GGG | - | chr8.1:18901534-18901553 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | - | chr8.1:18905609-18905628 | None:intergenic | 55.0% | |
| AGCCGATTGCCCGCAGTAAT+CGG | + | chr8.1:18901795-18901814 | MS.gene56947:CDS | 55.0% | |
| AGCTGATCCTTCGGTGGATG+CGG | - | chr8.1:18900265-18900284 | None:intergenic | 55.0% | |
| AGGGGTAACCTTGGCGCAAT+TGG | + | chr8.1:18905466-18905485 | MS.gene56947:intron | 55.0% | |
| AGTAACTCACGCCAAGGTGG+AGG | - | chr8.1:18900316-18900335 | None:intergenic | 55.0% | |
| CAGTTCACACCGGAGCAAGA+TGG | + | chr8.1:18906239-18906258 | MS.gene56947:CDS | 55.0% | |
| CATCTTGCTCCGGTGTGAAC+TGG | - | chr8.1:18906241-18906260 | None:intergenic | 55.0% | |
| CCCCGACTAAGAATGGATGG+TGG | - | chr8.1:18904925-18904944 | None:intergenic | 55.0% | |
| CTCCGATTACTGCGGGCAAT+CGG | - | chr8.1:18901800-18901819 | None:intergenic | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | - | chr8.1:18905608-18905627 | None:intergenic | 55.0% | |
| GAGCCATACCCATCTTGCTC+CGG | - | chr8.1:18906251-18906270 | None:intergenic | 55.0% | |
| GCAGCTGAGGCCATACTTCT+TGG | + | chr8.1:18901450-18901469 | MS.gene56947:intron | 55.0% | |
| GGTGCCCCTTCATTTGATGC+AGG | + | chr8.1:18903895-18903914 | MS.gene56947:CDS | 55.0% | |
| GTACCCCATGTGCTCCATTC+AGG | + | chr8.1:18902892-18902911 | MS.gene56947:CDS | 55.0% | |
| TAGTGCAGCGACAATGGGAG+GGG | - | chr8.1:18905947-18905966 | None:intergenic | 55.0% | |
| TCTCTTGTTCCCCAGATGGG+AGG | + | chr8.1:18901522-18901541 | MS.gene56947:CDS | 55.0% | |
| TGACGAGCCGGATCCTATAG+AGG | + | chr8.1:18901875-18901894 | MS.gene56947:CDS | 55.0% | |
| TGCAGCATAAGGCTTACCCC+AGG | - | chr8.1:18902595-18902614 | None:intergenic | 55.0% | |
| TGCTGCTCCATGGTGAGTTG+TGG | + | chr8.1:18903062-18903081 | MS.gene56947:intron | 55.0% | |
| !! | GAAGGGGCACCCCATTGAAA+TGG | - | chr8.1:18903886-18903905 | None:intergenic | 55.0% |
| !! | GGGGCATTTTGATGCAGCTG+AGG | + | chr8.1:18901437-18901456 | MS.gene56947:intron | 55.0% |
| !! | TAGTCGGGGTATTGGTTGGC+AGG | + | chr8.1:18904936-18904955 | MS.gene56947:CDS | 55.0% |
| ACCACAACCGCATCCACCGA+AGG | + | chr8.1:18900255-18900274 | MS.gene56947:CDS | 60.0% | |
| AGCGACAATGGGAGGGGGAA+TGG | - | chr8.1:18905941-18905960 | None:intergenic | 60.0% | |
| AGTGCAGCGACAATGGGAGG+GGG | - | chr8.1:18905946-18905965 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr8.1:18905613-18905632 | MS.gene56947:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr8.1:18905596-18905615 | None:intergenic | 60.0% | |
| CGATTGCCCGCAGTAATCGG+AGG | + | chr8.1:18901798-18901817 | MS.gene56947:CDS | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr8.1:18905596-18905615 | MS.gene56947:intron | 60.0% | |
| CTTGTTCCCCAGATGGGAGG+TGG | + | chr8.1:18901525-18901544 | MS.gene56947:CDS | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr8.1:18905597-18905616 | None:intergenic | 60.0% | |
| GGTTCATCTGCTTTCGGCGC+CGG | - | chr8.1:18900238-18900257 | None:intergenic | 60.0% | |
| TCCTTCGGTGGATGCGGTTG+TGG | - | chr8.1:18900259-18900278 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr8.1:18905597-18905616 | MS.gene56947:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr8.1:18905581-18905600 | MS.gene56947:intron | 60.0% |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr8.1:18905598-18905617 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr8.1:18905583-18905602 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr8.1:18905602-18905621 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr8.1:18905603-18905622 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr8.1:18905614-18905633 | MS.gene56947:intron | 65.0% | |
| ! | ACGCGTCGGCAGTCGAAGAG+TGG | + | chr8.1:18905261-18905280 | MS.gene56947:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 18900217 | 18906668 | 18900217 | ID=MS.gene56947 |
| chr8.1 | mRNA | 18900217 | 18906668 | 18900217 | ID=MS.gene56947.t1;Parent=MS.gene56947 |
| chr8.1 | exon | 18900217 | 18900325 | 18900217 | ID=MS.gene56947.t1.exon1;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18900217 | 18900325 | 18900217 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| chr8.1 | exon | 18901454 | 18901551 | 18901454 | ID=MS.gene56947.t1.exon2;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18901454 | 18901551 | 18901454 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| chr8.1 | exon | 18901720 | 18901896 | 18901720 | ID=MS.gene56947.t1.exon3;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18901720 | 18901896 | 18901720 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| chr8.1 | exon | 18902151 | 18902251 | 18902151 | ID=MS.gene56947.t1.exon4;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18902151 | 18902251 | 18902151 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| chr8.1 | exon | 18902522 | 18902597 | 18902522 | ID=MS.gene56947.t1.exon5;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18902522 | 18902597 | 18902522 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| chr8.1 | exon | 18902689 | 18902748 | 18902689 | ID=MS.gene56947.t1.exon6;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18902689 | 18902748 | 18902689 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| chr8.1 | exon | 18902889 | 18903073 | 18902889 | ID=MS.gene56947.t1.exon7;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18902889 | 18903073 | 18902889 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| chr8.1 | exon | 18903867 | 18903963 | 18903867 | ID=MS.gene56947.t1.exon8;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18903867 | 18903963 | 18903867 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| chr8.1 | exon | 18904871 | 18904957 | 18904871 | ID=MS.gene56947.t1.exon9;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18904871 | 18904957 | 18904871 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| chr8.1 | exon | 18905076 | 18905134 | 18905076 | ID=MS.gene56947.t1.exon10;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18905076 | 18905134 | 18905076 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| chr8.1 | exon | 18905234 | 18905325 | 18905234 | ID=MS.gene56947.t1.exon11;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18905234 | 18905325 | 18905234 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| chr8.1 | exon | 18905914 | 18905991 | 18905914 | ID=MS.gene56947.t1.exon12;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18905914 | 18905991 | 18905914 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| chr8.1 | exon | 18906101 | 18906261 | 18906101 | ID=MS.gene56947.t1.exon13;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18906101 | 18906261 | 18906101 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| chr8.1 | exon | 18906450 | 18906668 | 18906450 | ID=MS.gene56947.t1.exon14;Parent=MS.gene56947.t1 |
| chr8.1 | CDS | 18906450 | 18906668 | 18906450 | ID=cds.MS.gene56947.t1;Parent=MS.gene56947.t1 |
| Gene Sequence |
| Protein sequence |
