Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60344.t1 | RHN63538.1 | 100 | 532 | 0 | 0 | 1 | 532 | 1 | 532 | 1.70E-305 | 1057.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60344.t1 | Q27GI3 | 85.5 | 532 | 77 | 0 | 1 | 532 | 1 | 532 | 1.8e-271 | 936.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60344.t1 | A0A396IFG0 | 100.0 | 532 | 0 | 0 | 1 | 532 | 1 | 532 | 1.2e-305 | 1057.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene60344 | MS.gene058853 | PPI |
MS.gene60344 | MS.gene83067 | PPI |
MS.gene60344 | MS.gene70718 | PPI |
MS.gene60344 | MS.gene026529 | PPI |
MS.gene60344 | MS.gene96701 | PPI |
MS.gene62686 | MS.gene60344 | PPI |
MS.gene60344 | MS.gene052674 | PPI |
MS.gene015655 | MS.gene60344 | PPI |
MS.gene60344 | MS.gene53408 | PPI |
MS.gene64768 | MS.gene60344 | PPI |
MS.gene60344 | MS.gene020517 | PPI |
MS.gene60344 | MS.gene052675 | PPI |
MS.gene60344 | MS.gene59470 | PPI |
MS.gene60344 | MS.gene052677 | PPI |
MS.gene012865 | MS.gene60344 | PPI |
MS.gene60344 | MS.gene71606 | PPI |
MS.gene86930 | MS.gene60344 | PPI |
MS.gene60344 | MS.gene27811 | PPI |
MS.gene60344 | MS.gene25185 | PPI |
MS.gene60344 | MS.gene023585 | PPI |
MS.gene60344 | MS.gene044204 | PPI |
MS.gene010624 | MS.gene60344 | PPI |
MS.gene25800 | MS.gene60344 | PPI |
MS.gene37474 | MS.gene60344 | PPI |
MS.gene60344 | MS.gene32869 | PPI |
MS.gene60344 | MS.gene015069 | PPI |
MS.gene60344 | MS.gene27812 | PPI |
MS.gene60344 | MS.gene68064 | PPI |
MS.gene60344 | MS.gene98973 | PPI |
MS.gene60344 | MS.gene91317 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60344.t1 | MTR_4g106750 | 99.436 | 532 | 3 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1067 |
MS.gene60344.t1 | MTR_3g078270 | 90.789 | 532 | 49 | 0 | 1 | 532 | 1 | 532 | 0.0 | 991 |
MS.gene60344.t1 | MTR_4g106750 | 99.379 | 483 | 3 | 0 | 50 | 532 | 1 | 483 | 0.0 | 962 |
MS.gene60344.t1 | MTR_8g063220 | 81.614 | 533 | 97 | 1 | 1 | 532 | 1 | 533 | 0.0 | 897 |
MS.gene60344.t1 | MTR_5g035180 | 77.419 | 527 | 118 | 1 | 7 | 532 | 12 | 538 | 0.0 | 849 |
MS.gene60344.t1 | MTR_4g106750 | 99.189 | 370 | 3 | 0 | 163 | 532 | 11 | 380 | 0.0 | 740 |
MS.gene60344.t1 | MTR_3g103230 | 59.238 | 525 | 211 | 1 | 8 | 532 | 33 | 554 | 0.0 | 662 |
MS.gene60344.t1 | MTR_1g106085 | 59.770 | 522 | 207 | 2 | 10 | 531 | 8 | 526 | 0.0 | 637 |
MS.gene60344.t1 | MTR_8g086520 | 59.073 | 518 | 210 | 1 | 13 | 530 | 7 | 522 | 0.0 | 627 |
MS.gene60344.t1 | MTR_5g022110 | 57.692 | 520 | 217 | 1 | 13 | 532 | 31 | 547 | 0.0 | 626 |
MS.gene60344.t1 | MTR_2g016460 | 58.126 | 523 | 216 | 2 | 8 | 530 | 3 | 522 | 0.0 | 620 |
MS.gene60344.t1 | MTR_3g080390 | 58.252 | 515 | 212 | 2 | 17 | 530 | 6 | 518 | 0.0 | 602 |
MS.gene60344.t1 | MTR_8g086520 | 58.705 | 448 | 185 | 0 | 13 | 460 | 7 | 454 | 0.0 | 537 |
MS.gene60344.t1 | MTR_1g021120 | 52.816 | 515 | 237 | 3 | 19 | 531 | 36 | 546 | 0.0 | 531 |
MS.gene60344.t1 | MTR_8g086520 | 59.158 | 404 | 163 | 1 | 127 | 530 | 5 | 406 | 2.17e-173 | 495 |
MS.gene60344.t1 | MTR_8g086520 | 58.586 | 396 | 164 | 0 | 13 | 408 | 7 | 402 | 1.47e-165 | 475 |
MS.gene60344.t1 | MTR_8g068550 | 34.955 | 555 | 316 | 7 | 10 | 529 | 211 | 755 | 4.64e-108 | 340 |
MS.gene60344.t1 | MTR_5g032020 | 36.100 | 518 | 293 | 4 | 40 | 525 | 182 | 693 | 1.47e-103 | 326 |
MS.gene60344.t1 | MTR_2g084895 | 34.933 | 521 | 299 | 5 | 43 | 529 | 164 | 678 | 1.48e-94 | 302 |
MS.gene60344.t1 | MTR_4g055290 | 34.549 | 521 | 296 | 8 | 43 | 529 | 171 | 680 | 4.43e-90 | 291 |
MS.gene60344.t1 | MTR_2g103510 | 32.308 | 520 | 314 | 6 | 26 | 529 | 94 | 591 | 1.15e-89 | 287 |
MS.gene60344.t1 | MTR_8g086535 | 65.347 | 101 | 35 | 0 | 308 | 408 | 18 | 118 | 5.01e-36 | 130 |
MS.gene60344.t1 | MTR_1g079900 | 40.323 | 124 | 57 | 4 | 420 | 530 | 59 | 178 | 2.97e-20 | 89.4 |
MS.gene60344.t1 | MTR_3g087320 | 53.731 | 67 | 17 | 1 | 461 | 527 | 72 | 124 | 6.00e-16 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60344.t1 | AT5G62890 | 85.526 | 532 | 77 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
MS.gene60344.t1 | AT5G62890 | 85.526 | 532 | 77 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
MS.gene60344.t1 | AT5G62890 | 85.526 | 532 | 77 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
MS.gene60344.t1 | AT5G49990 | 80.798 | 526 | 100 | 1 | 8 | 532 | 3 | 528 | 0.0 | 874 |
MS.gene60344.t1 | AT5G49990 | 80.798 | 526 | 100 | 1 | 8 | 532 | 3 | 528 | 0.0 | 874 |
MS.gene60344.t1 | AT5G49990 | 80.798 | 526 | 100 | 1 | 8 | 532 | 3 | 528 | 0.0 | 874 |
MS.gene60344.t1 | AT5G49990 | 80.798 | 526 | 100 | 1 | 8 | 532 | 3 | 528 | 0.0 | 874 |
MS.gene60344.t1 | AT1G60030 | 76.091 | 527 | 126 | 0 | 6 | 532 | 12 | 538 | 0.0 | 847 |
MS.gene60344.t1 | AT5G62890 | 85.435 | 460 | 67 | 0 | 1 | 460 | 1 | 460 | 0.0 | 814 |
MS.gene60344.t1 | AT1G10540 | 68.216 | 538 | 164 | 3 | 1 | 531 | 1 | 538 | 0.0 | 777 |
MS.gene60344.t1 | AT1G49960 | 60.496 | 524 | 207 | 0 | 8 | 531 | 2 | 525 | 0.0 | 645 |
MS.gene60344.t1 | AT2G34190 | 59.846 | 518 | 206 | 1 | 13 | 530 | 7 | 522 | 0.0 | 630 |
MS.gene60344.t1 | AT1G65550 | 54.064 | 529 | 234 | 2 | 10 | 531 | 14 | 540 | 0.0 | 607 |
MS.gene60344.t1 | AT2G05760 | 55.922 | 515 | 224 | 2 | 17 | 530 | 6 | 518 | 0.0 | 590 |
MS.gene60344.t1 | AT1G10540 | 67.268 | 388 | 120 | 3 | 1 | 381 | 1 | 388 | 0.0 | 542 |
MS.gene60344.t1 | AT2G26510 | 49.516 | 517 | 254 | 3 | 18 | 531 | 36 | 548 | 3.94e-174 | 503 |
MS.gene60344.t1 | AT5G25420 | 48.533 | 443 | 158 | 5 | 10 | 452 | 26 | 398 | 3.96e-141 | 414 |
MS.gene60344.t1 | AT2G26510 | 50.954 | 367 | 174 | 2 | 18 | 381 | 36 | 399 | 8.00e-122 | 364 |
MS.gene60344.t1 | AT2G26510 | 50.282 | 354 | 170 | 2 | 18 | 368 | 36 | 386 | 2.40e-115 | 348 |
MS.gene60344.t1 | AT4G38050 | 35.249 | 522 | 300 | 5 | 40 | 529 | 189 | 704 | 1.85e-94 | 303 |
MS.gene60344.t1 | AT2G27810 | 35.509 | 521 | 297 | 5 | 43 | 529 | 186 | 701 | 1.83e-93 | 300 |
MS.gene60344.t1 | AT2G27810 | 34.312 | 545 | 295 | 7 | 43 | 529 | 186 | 725 | 4.03e-89 | 289 |
MS.gene60344.t1 | AT2G27810 | 39.259 | 405 | 227 | 3 | 43 | 429 | 186 | 589 | 2.92e-79 | 259 |
MS.gene60344.t1 | AT2G27810 | 39.665 | 358 | 197 | 3 | 43 | 382 | 186 | 542 | 1.59e-69 | 233 |
Find 149 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTTCTTGTGTCAGTCTTAA+AGG | 0.116755 | 8.2:+19129885 | None:intergenic |
TCAACCCTTCAAATAGTATT+AGG | 0.142814 | 8.2:-19134103 | MS.gene60344:CDS |
CTGTATGAGTTAGGCTTTCC+TGG | 0.181335 | 8.2:-19133729 | MS.gene60344:CDS |
TTGGTATCTCTTGTTGGTTT+TGG | 0.200317 | 8.2:-19133753 | MS.gene60344:CDS |
ATTAGGCTTCTCCATCTTCT+TGG | 0.222669 | 8.2:-19130316 | MS.gene60344:CDS |
CAATCAAAAGCTTTCGTTGC+TGG | 0.262369 | 8.2:-19130000 | MS.gene60344:CDS |
AACGAGTACACAGCAATAAA+TGG | 0.288001 | 8.2:-19130270 | MS.gene60344:CDS |
GTACCCCATGTGCTCCATTC+AGG | 0.304871 | 8.2:-19133417 | MS.gene60344:CDS |
TGTACGTTTAACGTGGTTAT+AGG | 0.312485 | 8.2:+19133311 | None:intergenic |
GCAGCTGAGGCCATACTTCT+TGG | 0.314540 | 8.2:-19134824 | MS.gene60344:intron |
CAACCCTTCAAATAGTATTA+GGG | 0.316874 | 8.2:-19134102 | MS.gene60344:CDS |
TTTAGGACCAAGTTTGTATT+AGG | 0.317423 | 8.2:-19130333 | MS.gene60344:CDS |
TATTAGGGTTTAGCGGTCTT+TGG | 0.320950 | 8.2:-19134087 | MS.gene60344:CDS |
TAGTGAAAATGCTGGTCTTT+TGG | 0.321952 | 8.2:-19131053 | MS.gene60344:CDS |
TTAGGCTTCTCCATCTTCTT+GGG | 0.360098 | 8.2:-19130315 | MS.gene60344:CDS |
GTTCCTTTGGTATCTCTTGT+TGG | 0.360812 | 8.2:-19133759 | MS.gene60344:CDS |
ACATTGGTGCAAACGTTGTT+TGG | 0.361228 | 8.2:-19134505 | MS.gene60344:CDS |
TACACAGCAATAAATGGTTT+TGG | 0.364347 | 8.2:-19130264 | MS.gene60344:CDS |
CCAACATTATCTTGTGATGC+TGG | 0.375334 | 8.2:-19134798 | MS.gene60344:CDS |
ATTTATTTAGATTGAAAGGC+AGG | 0.381735 | 8.2:+19129848 | None:intergenic |
CATCTTGCTCCGGTGTGAAC+TGG | 0.385883 | 8.2:+19130240 | None:intergenic |
TTACATTGCCACCTCCCATC+TGG | 0.391083 | 8.2:+19134741 | None:intergenic |
ATAAGAAAGAATCTGCTATT+CGG | 0.396790 | 8.2:-19129945 | MS.gene60344:CDS |
TTATCAGGATTGTTTGGAAC+TGG | 0.397608 | 8.2:-19131193 | MS.gene60344:CDS |
TCCACTCTCAGCAGTTCCTT+TGG | 0.398718 | 8.2:-19133772 | MS.gene60344:CDS |
TGGAGTTGTTGCATATTTCT+TGG | 0.399662 | 8.2:-19129980 | MS.gene60344:CDS |
GGTTGTGGTTCATCTGCTTT+CGG | 0.406675 | 8.2:+19136035 | None:intergenic |
TTCTCATACAATACCTCTAT+AGG | 0.410181 | 8.2:+19134388 | None:intergenic |
TCCATTCTTAGTCGGGGTAT+TGG | 0.410958 | 8.2:-19131356 | MS.gene60344:CDS |
AGCCGATTGCCCGCAGTAAT+CGG | 0.411159 | 8.2:-19134481 | MS.gene60344:CDS |
GTTGCTAAGTGTGTAGAGAT+TGG | 0.411415 | 8.2:-19133614 | MS.gene60344:CDS |
ACCATGGAGCAGCATCTATT+AGG | 0.414783 | 8.2:+19133256 | None:intergenic |
GGTGTCGGCATTCTGTTATC+AGG | 0.417532 | 8.2:-19131208 | MS.gene60344:CDS |
ACCACCATCCATTCTTAGTC+GGG | 0.419736 | 8.2:-19131363 | MS.gene60344:CDS |
ATGTTGGAAACCAAGAAGTA+TGG | 0.422658 | 8.2:+19134814 | None:intergenic |
ATTCTGTTATCAGGATTGTT+TGG | 0.423854 | 8.2:-19131199 | MS.gene60344:CDS |
GGTTCATCTGCTTTCGGCGC+CGG | 0.425593 | 8.2:+19136041 | None:intergenic |
AGCGACAATTAGAGCGCCTT+GGG | 0.426723 | 8.2:+19134126 | None:intergenic |
TACTTCTCTTGTTCCCCAGA+TGG | 0.427384 | 8.2:-19134756 | MS.gene60344:CDS |
CAGCCACAAAGAGTAGTGTT+TGG | 0.429045 | 8.2:+19134536 | None:intergenic |
TATCCAAACACTACTCTTTG+TGG | 0.431001 | 8.2:-19134539 | MS.gene60344:CDS |
TAAACCCTAATACTATTTGA+AGG | 0.432274 | 8.2:+19134098 | None:intergenic |
GAAGGGGCACCCCATTGAAA+TGG | 0.438034 | 8.2:+19132423 | None:intergenic |
GAGTTCCGTATCCATTTCAA+TGG | 0.438469 | 8.2:-19132434 | MS.gene60344:CDS |
GGATTGTTTGGAACTGGCAT+TGG | 0.442498 | 8.2:-19131187 | MS.gene60344:CDS |
ACCAATACCCCGACTAAGAA+TGG | 0.448207 | 8.2:+19131355 | None:intergenic |
TGTATGAGTTAGGCTTTCCT+GGG | 0.448491 | 8.2:-19133728 | MS.gene60344:CDS |
TGCTTGTTCTTTGCTTATGT+CGG | 0.453106 | 8.2:-19130508 | MS.gene60344:intron |
TAGTCGGGGTATTGGTTGGC+AGG | 0.453343 | 8.2:-19131348 | MS.gene60344:intron |
TCCTTCGGTGGATGCGGTTG+TGG | 0.455133 | 8.2:+19136020 | None:intergenic |
ACCTGCCGCACTGATAGTTC+AGG | 0.456574 | 8.2:-19133279 | MS.gene60344:CDS |
CTTGTTCCCCAGATGGGAGG+TGG | 0.462178 | 8.2:-19134749 | MS.gene60344:CDS |
TACATTGCCACCTCCCATCT+GGG | 0.463374 | 8.2:+19134742 | None:intergenic |
ACTTCTCTTGTTCCCCAGAT+GGG | 0.464390 | 8.2:-19134755 | MS.gene60344:CDS |
AGTTCCGTATCCATTTCAAT+GGG | 0.464869 | 8.2:-19132433 | MS.gene60344:CDS |
AGAATGATCGATATTGTTGC+TGG | 0.465220 | 8.2:+19134439 | None:intergenic |
ACAATATCGATCATTCTTGC+TGG | 0.468221 | 8.2:-19134433 | MS.gene60344:CDS |
CTCCGATTACTGCGGGCAAT+CGG | 0.469149 | 8.2:+19134479 | None:intergenic |
TACAATACCTCTATAGGATC+CGG | 0.469817 | 8.2:+19134394 | None:intergenic |
CAGTATAGTGCAGCGACAAT+GGG | 0.472587 | 8.2:+19130529 | None:intergenic |
GTTATGCAGTAAGAAACATT+TGG | 0.472916 | 8.2:+19135990 | None:intergenic |
ATTGCTAGTATTTGTTTCAC+AGG | 0.475975 | 8.2:-19133576 | MS.gene60344:intron |
CAACATTATCTTGTGATGCT+GGG | 0.482071 | 8.2:-19134797 | MS.gene60344:CDS |
ACATTTGGAAGCTGATCCTT+CGG | 0.486409 | 8.2:+19136005 | None:intergenic |
GCCTGAACTATCAGTGCGGC+AGG | 0.490715 | 8.2:+19133278 | None:intergenic |
GATAGATAAACCCAAGAAGA+TGG | 0.491688 | 8.2:+19130305 | None:intergenic |
ACTTGGTCCTAAAACTATTG+AGG | 0.494306 | 8.2:+19130343 | None:intergenic |
TTCTTAGTCGGGGTATTGGT+TGG | 0.497089 | 8.2:-19131352 | MS.gene60344:CDS |
AATACTAGCAATACAAGCTC+TGG | 0.497265 | 8.2:+19133587 | None:intergenic |
GCTTCGCCTGCATCAAATGA+AGG | 0.499113 | 8.2:+19132405 | None:intergenic |
GCAGTATAGTGCAGCGACAA+TGG | 0.501040 | 8.2:+19130528 | None:intergenic |
AAGCGACAATTAGAGCGCCT+TGG | 0.503518 | 8.2:+19134125 | None:intergenic |
AATGGCAGGAGGTGGAGCTC+CGG | 0.503871 | 8.2:-19136060 | MS.gene60344:CDS |
CAAATAGTATTAGGGTTTAG+CGG | 0.510367 | 8.2:-19134094 | MS.gene60344:CDS |
TAGGAAGAAATGGCAGGAGG+TGG | 0.511282 | 8.2:-19136068 | None:intergenic |
GGTGCCCCTTCATTTGATGC+AGG | 0.512396 | 8.2:-19132411 | MS.gene60344:CDS |
TTTCCTTATAGTGAAAATGC+TGG | 0.520510 | 8.2:-19131061 | MS.gene60344:intron |
TACCACCATCCATTCTTAGT+CGG | 0.522635 | 8.2:-19131364 | MS.gene60344:CDS |
AGTTCACACCGGAGCAAGAT+GGG | 0.524476 | 8.2:-19130238 | MS.gene60344:intron |
AGCTGATCCTTCGGTGGATG+CGG | 0.527005 | 8.2:+19136014 | None:intergenic |
AAGTATTTATTTAGATTGAA+AGG | 0.529186 | 8.2:+19129844 | None:intergenic |
ATTTGTTACATGCAGTCTAG+TGG | 0.536187 | 8.2:-19131428 | MS.gene60344:intron |
CAAACACTACTCTTTGTGGC+TGG | 0.539278 | 8.2:-19134535 | MS.gene60344:CDS |
CTAAGAATGGATGGTGGTAA+TGG | 0.540732 | 8.2:+19131368 | None:intergenic |
GTCTTTGGCGAAATGTTGCA+AGG | 0.546467 | 8.2:-19134072 | MS.gene60344:intron |
TGACGAGCCGGATCCTATAG+AGG | 0.546780 | 8.2:-19134401 | MS.gene60344:intron |
AGCATTGGTGGGATAAGTAC+AGG | 0.547825 | 8.2:-19129909 | MS.gene60344:CDS |
CAGTTCACACCGGAGCAAGA+TGG | 0.550387 | 8.2:-19130239 | MS.gene60344:CDS |
AAACCCTAATACTATTTGAA+GGG | 0.555146 | 8.2:+19134099 | None:intergenic |
GGAGAAGCCTAATACAAACT+TGG | 0.557179 | 8.2:+19130326 | None:intergenic |
GAAATTTAAGAAGATAATGC+GGG | 0.561073 | 8.2:-19134152 | MS.gene60344:CDS |
AACAAAGGATGTCATCATCA+TGG | 0.564105 | 8.2:+19132377 | None:intergenic |
GCCTAATAGATGCTGCTCCA+TGG | 0.564558 | 8.2:-19133257 | MS.gene60344:intron |
CGATATTGTTGCTGGAACGA+AGG | 0.565616 | 8.2:+19134447 | None:intergenic |
CCAGCATCACAAGATAATGT+TGG | 0.565678 | 8.2:+19134798 | None:intergenic |
ATATCATTTGTAGGCTCGGG+AGG | 0.566419 | 8.2:-19130390 | MS.gene60344:intron |
AAGACAGAGGAAAGCATTGG+TGG | 0.566646 | 8.2:-19129921 | MS.gene60344:CDS |
AAGATAATGCGGGCAACCCA+AGG | 0.567568 | 8.2:-19134142 | MS.gene60344:CDS |
GAGCCATACCCATCTTGCTC+CGG | 0.572236 | 8.2:+19130230 | None:intergenic |
ATCCTTTGTTGCTCTAGTAG+AGG | 0.572855 | 8.2:-19132364 | MS.gene60344:intron |
TAGTGCAGCGACAATGGGAG+GGG | 0.574206 | 8.2:+19130534 | None:intergenic |
ACCACCTAAGTTACACAGAT+GGG | 0.574576 | 8.2:+19129821 | None:intergenic |
AGTAACTCACGCCAAGGTGG+AGG | 0.574584 | 8.2:+19135963 | None:intergenic |
TACAGTTAGGAAGAAATGGC+AGG | 0.575001 | 8.2:-19136074 | None:intergenic |
AGAGTGGTTCAAATATCCGC+AGG | 0.575012 | 8.2:-19131007 | MS.gene60344:CDS |
CTTCGCCTGCATCAAATGAA+GGG | 0.577275 | 8.2:+19132406 | None:intergenic |
TCTCTTGTTCCCCAGATGGG+AGG | 0.578580 | 8.2:-19134752 | MS.gene60344:CDS |
AACCACCTAAGTTACACAGA+TGG | 0.579661 | 8.2:+19129820 | None:intergenic |
ACGCGTCGGCAGTCGAAGAG+TGG | 0.586302 | 8.2:-19131023 | MS.gene60344:CDS |
ATCTGGGGAACAAGAGAAGT+AGG | 0.586891 | 8.2:+19134758 | None:intergenic |
GCACCCCATTGAAATGGATA+CGG | 0.591804 | 8.2:+19132429 | None:intergenic |
TACCTCTACTAGAGCAACAA+AGG | 0.594784 | 8.2:+19132362 | None:intergenic |
TGGTCGATTCAATGACGAGC+CGG | 0.595657 | 8.2:-19134413 | MS.gene60344:CDS |
TTTATTTAGATTGAAAGGCA+GGG | 0.596834 | 8.2:+19129849 | None:intergenic |
GTGTACTCGTTGAAGTACTG+TGG | 0.597313 | 8.2:+19130282 | None:intergenic |
ACCAAAGGAACTGCTGAGAG+TGG | 0.597590 | 8.2:+19133771 | None:intergenic |
TAAGAGCCTCCGATTACTGC+GGG | 0.598802 | 8.2:+19134472 | None:intergenic |
TATAGTGCAGCGACAATGGG+AGG | 0.601160 | 8.2:+19130532 | None:intergenic |
ATAGTGCAGCGACAATGGGA+GGG | 0.605016 | 8.2:+19130533 | None:intergenic |
AGAAATTTAAGAAGATAATG+CGG | 0.606617 | 8.2:-19134153 | MS.gene60344:CDS |
GGAAAGACAGAGGAAAGCAT+TGG | 0.608090 | 8.2:-19129924 | MS.gene60344:CDS |
GGATGTCATCATCATGGCAA+AGG | 0.608481 | 8.2:+19132383 | None:intergenic |
TGTACTCGTTGAAGTACTGT+GGG | 0.612732 | 8.2:+19130283 | None:intergenic |
TGTTCACGGTTGCAATTGTG+TGG | 0.617824 | 8.2:-19133365 | MS.gene60344:CDS |
ACCACAACCGCATCCACCGA+AGG | 0.623080 | 8.2:-19136021 | MS.gene60344:CDS |
TTTCCTGAATGGAGCACATG+GGG | 0.627157 | 8.2:+19133414 | None:intergenic |
GCATAACAAGTCCTCCACCT+TGG | 0.628357 | 8.2:-19135974 | MS.gene60344:CDS |
TTCGCCTGCATCAAATGAAG+GGG | 0.629691 | 8.2:+19132407 | None:intergenic |
TTTGGAAGCTGATCCTTCGG+TGG | 0.629961 | 8.2:+19136008 | None:intergenic |
AGTGCAGCGACAATGGGAGG+GGG | 0.632519 | 8.2:+19130535 | None:intergenic |
ATACCCCGACTAAGAATGGA+TGG | 0.633541 | 8.2:+19131359 | None:intergenic |
AAACCAACAAGAGATACCAA+AGG | 0.636815 | 8.2:+19133756 | None:intergenic |
CCACCATCCATTCTTAGTCG+GGG | 0.641952 | 8.2:-19131362 | MS.gene60344:CDS |
AGACAGAGGAAAGCATTGGT+GGG | 0.646989 | 8.2:-19129920 | MS.gene60344:CDS |
GAGTGGTTCAAATATCCGCA+GGG | 0.654618 | 8.2:-19131006 | MS.gene60344:CDS |
CGATTGCCCGCAGTAATCGG+AGG | 0.657165 | 8.2:-19134478 | MS.gene60344:CDS |
TCTGCTATTCGGAAAGACAG+AGG | 0.662986 | 8.2:-19129934 | MS.gene60344:CDS |
GTATGAGTTAGGCTTTCCTG+GGG | 0.670750 | 8.2:-19133727 | MS.gene60344:intron |
ACATTGCCACCTCCCATCTG+GGG | 0.672994 | 8.2:+19134743 | None:intergenic |
TCTGCGTTGTACGTTTAACG+TGG | 0.676085 | 8.2:+19133304 | None:intergenic |
ATAAGAGCCTCCGATTACTG+CGG | 0.677413 | 8.2:+19134471 | None:intergenic |
TAAAGTAACTCACGCCAAGG+TGG | 0.696583 | 8.2:+19135960 | None:intergenic |
TGTGGCTGGAATCAACACAT+TGG | 0.698610 | 8.2:-19134521 | MS.gene60344:CDS |
AGTTAGGAAGAAATGGCAGG+AGG | 0.712374 | 8.2:-19136071 | None:intergenic |
AAAGAAAATCATAAACCCTG+CGG | 0.713858 | 8.2:+19130991 | None:intergenic |
AAGAGAAGTAGGAATTAACA+CGG | 0.724184 | 8.2:+19134769 | None:intergenic |
CCCCGACTAAGAATGGATGG+TGG | 0.740032 | 8.2:+19131362 | None:intergenic |
GTTCCGTATCCATTTCAATG+GGG | 0.744828 | 8.2:-19132432 | MS.gene60344:CDS |
TTAGGCCTGAACTATCAGTG+CGG | 0.794578 | 8.2:+19133274 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAAAAATAATAATATTTT+TGG | + | chr8.2:19131278-19131297 | None:intergenic | 0.0% |
!! | AAATCAATAAATTGAAAATA+GGG | + | chr8.2:19130594-19130613 | None:intergenic | 10.0% |
!! | AATTAAAAATATCCAAATAA+AGG | + | chr8.2:19133557-19133576 | None:intergenic | 10.0% |
!! | ATTAAATTTGATGTAAAATT+TGG | - | chr8.2:19131031-19131050 | MS.gene60344:CDS | 10.0% |
!! | TTAAATTTGATGTAAAATTT+GGG | - | chr8.2:19131032-19131051 | MS.gene60344:CDS | 10.0% |
!!! | ATTTGTTCATTTTTATAAAA+TGG | - | chr8.2:19133035-19133054 | MS.gene60344:intron | 10.0% |
!!! | ATTTTACATCAAATTTAATA+AGG | + | chr8.2:19131030-19131049 | None:intergenic | 10.0% |
!!! | TATTATTATTTTTAAACAAG+AGG | - | chr8.2:19131282-19131301 | MS.gene60344:intron | 10.0% |
!! | AAGTATTTATTTAGATTGAA+AGG | + | chr8.2:19136049-19136068 | None:intergenic | 15.0% |
!! | GAAATAAGAAGAAAAATAAA+AGG | - | chr8.2:19130214-19130233 | MS.gene60344:intron | 15.0% |
!! | GAAATCAATAAATTGAAAAT+AGG | + | chr8.2:19130595-19130614 | None:intergenic | 15.0% |
!! | TAAATTTGATGTAAAATTTG+GGG | - | chr8.2:19131033-19131052 | MS.gene60344:CDS | 15.0% |
!! | TATCAATATGAAATATTCTA+GGG | + | chr8.2:19135036-19135055 | None:intergenic | 15.0% |
!! | TTATCAATATGAAATATTCT+AGG | + | chr8.2:19135037-19135056 | None:intergenic | 15.0% |
!!! | AAAACAAATTTTTTGAAATC+TGG | - | chr8.2:19133820-19133839 | MS.gene60344:intron | 15.0% |
!!! | AAATAATAATATTTTTGGCT+AGG | + | chr8.2:19131273-19131292 | None:intergenic | 15.0% |
!!! | AATAATTCAATTTTAATACC+TGG | - | chr8.2:19132242-19132261 | MS.gene60344:intron | 15.0% |
!!! | ATATTAGTTTCTTATTCATT+GGG | - | chr8.2:19133413-19133432 | MS.gene60344:CDS | 15.0% |
!!! | CATTTTTATAAAATGGTTAA+AGG | - | chr8.2:19133042-19133061 | MS.gene60344:intron | 15.0% |
!!! | CTAAATTACTTTTTTAGTTA+TGG | - | chr8.2:19134171-19134190 | MS.gene60344:intron | 15.0% |
!!! | TAATAAAATAAGTATTGCAT+AGG | + | chr8.2:19133674-19133693 | None:intergenic | 15.0% |
!!! | TAATTTGTACTACTAAAATT+TGG | - | chr8.2:19134277-19134296 | MS.gene60344:intron | 15.0% |
!!! | TTTAAGTTTTATGAAGTAAT+CGG | + | chr8.2:19132819-19132838 | None:intergenic | 15.0% |
!!! | TTTTTGTTTAGAAAAATCTA+GGG | - | chr8.2:19133868-19133887 | MS.gene60344:intron | 15.0% |
!!! | TTTTTTGTTTAGAAAAATCT+AGG | - | chr8.2:19133867-19133886 | MS.gene60344:intron | 15.0% |
!! | AAATTTGATGTAAAATTTGG+GGG | - | chr8.2:19131034-19131053 | MS.gene60344:CDS | 20.0% |
!! | AATAAGAAACTAATATCTCA+AGG | + | chr8.2:19133409-19133428 | None:intergenic | 20.0% |
!! | AGAAATTTAAGAAGATAATG+CGG | - | chr8.2:19131737-19131756 | MS.gene60344:intron | 20.0% |
!! | ATAAAAACTTAATTCTAGTG+AGG | + | chr8.2:19134431-19134450 | None:intergenic | 20.0% |
!! | ATATTCATAACACGAATAAT+CGG | + | chr8.2:19134376-19134395 | None:intergenic | 20.0% |
!! | ATGCCCAAAAAATAAAAATA+GGG | + | chr8.2:19131659-19131678 | None:intergenic | 20.0% |
!! | ATTATATAACAACAATGTTG+AGG | - | chr8.2:19130830-19130849 | MS.gene60344:intron | 20.0% |
!! | CATCTTCTTTAATTAAAGTT+GGG | + | chr8.2:19134772-19134791 | None:intergenic | 20.0% |
!! | GATAACTTTAATCGATATAA+TGG | - | chr8.2:19133997-19134016 | MS.gene60344:intron | 20.0% |
!! | TAAATCATCAAAATTCAAGT+TGG | - | chr8.2:19134072-19134091 | MS.gene60344:intron | 20.0% |
!! | TATAGAAGTTAATATAGAGT+TGG | + | chr8.2:19135235-19135254 | None:intergenic | 20.0% |
!! | TATGCCCAAAAAATAAAAAT+AGG | + | chr8.2:19131660-19131679 | None:intergenic | 20.0% |
!! | TCATCTTCTTTAATTAAAGT+TGG | + | chr8.2:19134773-19134792 | None:intergenic | 20.0% |
!! | TGCTCATTATTAACTAAAAT+AGG | + | chr8.2:19133643-19133662 | None:intergenic | 20.0% |
!! | TGTATAAATGCATTTATTTG+TGG | + | chr8.2:19134602-19134621 | None:intergenic | 20.0% |
!! | TGTCTTCCTAAAATAATTAT+TGG | + | chr8.2:19130386-19130405 | None:intergenic | 20.0% |
!! | TTATGTCATATTGTTGAATT+TGG | - | chr8.2:19130804-19130823 | MS.gene60344:intron | 20.0% |
!!! | AAATCATCAAAATTCAAGTT+GGG | - | chr8.2:19134073-19134092 | MS.gene60344:CDS | 20.0% |
!!! | AATCATTATCATTTTCAAGT+TGG | + | chr8.2:19134045-19134064 | None:intergenic | 20.0% |
!!! | AATCTTGACTTGTTAAAAAA+TGG | - | chr8.2:19133067-19133086 | MS.gene60344:intron | 20.0% |
!!! | AATTTTAGCCATAGATATAT+TGG | - | chr8.2:19130000-19130019 | MS.gene60344:CDS | 20.0% |
!!! | ATTCTTTTTTTTTGACAAGA+TGG | - | chr8.2:19135694-19135713 | MS.gene60344:intron | 20.0% |
!!! | ATTTTCATATTAGGGATTTA+GGG | - | chr8.2:19130687-19130706 | MS.gene60344:intron | 20.0% |
!!! | CATTTTACTGGTTAATTATA+AGG | - | chr8.2:19130763-19130782 | MS.gene60344:intron | 20.0% |
!!! | GATATTAGTTTCTTATTCAT+TGG | - | chr8.2:19133412-19133431 | MS.gene60344:CDS | 20.0% |
!!! | GATCCCTATTTTTATTTTTT+GGG | - | chr8.2:19131653-19131672 | MS.gene60344:intron | 20.0% |
!!! | GTTAGTTATAGTCTTTTATT+AGG | + | chr8.2:19135126-19135145 | None:intergenic | 20.0% |
!!! | TATTTTCATATTAGGGATTT+AGG | - | chr8.2:19130686-19130705 | MS.gene60344:intron | 20.0% |
!!! | TATTTTTTCTTTTACTGTGT+AGG | - | chr8.2:19135304-19135323 | MS.gene60344:intron | 20.0% |
!!! | TCCTAGTTATTTTCATATTA+GGG | - | chr8.2:19130679-19130698 | MS.gene60344:intron | 20.0% |
!!! | TGCTTGATAATTTTTCTTTT+TGG | - | chr8.2:19130280-19130299 | MS.gene60344:CDS | 20.0% |
!!! | TTATTTGAAACATAGATACT+GGG | + | chr8.2:19132364-19132383 | None:intergenic | 20.0% |
!!! | TTCCTAGTTATTTTCATATT+AGG | - | chr8.2:19130678-19130697 | MS.gene60344:intron | 20.0% |
!!! | TTTACAAACAAACATTTTAC+TGG | - | chr8.2:19130751-19130770 | MS.gene60344:intron | 20.0% |
! | AAACCCTAATACTATTTGAA+GGG | + | chr8.2:19131794-19131813 | None:intergenic | 25.0% |
! | AAATCAGAATAAAAGTAGCA+TGG | + | chr8.2:19130726-19130745 | None:intergenic | 25.0% |
! | AAGAATTACAACAATAAGGA+AGG | + | chr8.2:19133328-19133347 | None:intergenic | 25.0% |
! | AGAAAGACACTTTAAACAAT+TGG | + | chr8.2:19130076-19130095 | None:intergenic | 25.0% |
! | AGGGTATATTAATTTATGGT+TGG | - | chr8.2:19134104-19134123 | MS.gene60344:CDS | 25.0% |
! | ATAAGAAAGAATCTGCTATT+CGG | - | chr8.2:19135945-19135964 | MS.gene60344:intron | 25.0% |
! | ATTAGAATAACATGCAAGAA+TGG | + | chr8.2:19130169-19130188 | None:intergenic | 25.0% |
! | ATTTATTTAGATTGAAAGGC+AGG | + | chr8.2:19136045-19136064 | None:intergenic | 25.0% |
! | CAATTTAAATATGCAGCATA+AGG | + | chr8.2:19132193-19132212 | None:intergenic | 25.0% |
! | CCTACAAATGATATTAAAAG+TGG | + | chr8.2:19135494-19135513 | None:intergenic | 25.0% |
! | CTCTTATGAATATGTTATCA+GGG | - | chr8.2:19133719-19133738 | MS.gene60344:intron | 25.0% |
! | GAAAGATATAGAAACATGAA+CGG | + | chr8.2:19132393-19132412 | None:intergenic | 25.0% |
! | GAAATTCAATCATCAGAAAT+AGG | + | chr8.2:19131944-19131963 | None:intergenic | 25.0% |
! | GAAATTTAAGAAGATAATGC+GGG | - | chr8.2:19131738-19131757 | MS.gene60344:intron | 25.0% |
! | GGGTATATTAATTTATGGTT+GGG | - | chr8.2:19134105-19134124 | MS.gene60344:CDS | 25.0% |
! | GGTATATTAATTTATGGTTG+GGG | - | chr8.2:19134106-19134125 | MS.gene60344:CDS | 25.0% |
! | GTTCAAGAATTACAACAATA+AGG | + | chr8.2:19133332-19133351 | None:intergenic | 25.0% |
! | GTTGTAATTCTACATACATA+TGG | - | chr8.2:19130649-19130668 | MS.gene60344:intron | 25.0% |
! | TAAACCCTAATACTATTTGA+AGG | + | chr8.2:19131795-19131814 | None:intergenic | 25.0% |
! | TCCCTAATATGAAAATAACT+AGG | + | chr8.2:19130683-19130702 | None:intergenic | 25.0% |
! | TTACATTAAAGCTATTACAC+TGG | + | chr8.2:19134208-19134227 | None:intergenic | 25.0% |
! | TTCTAATTCTATACTTAGCA+AGG | - | chr8.2:19130182-19130201 | MS.gene60344:intron | 25.0% |
! | TTTAATATCATTTGTAGGCT+CGG | - | chr8.2:19135496-19135515 | MS.gene60344:intron | 25.0% |
! | TTTATTTAGATTGAAAGGCA+GGG | + | chr8.2:19136044-19136063 | None:intergenic | 25.0% |
!! | AAAATAAGTATTGCATAGGA+AGG | + | chr8.2:19133670-19133689 | None:intergenic | 25.0% |
!! | AAGTAAATCAAAAGCATGAA+TGG | + | chr8.2:19135441-19135460 | None:intergenic | 25.0% |
!! | ATGATTTTCTTTTCGATACT+AGG | - | chr8.2:19134910-19134929 | MS.gene60344:intron | 25.0% |
!! | CTTATTTGAAACATAGATAC+TGG | + | chr8.2:19132365-19132384 | None:intergenic | 25.0% |
!! | GTCTGACCAATAATTATTTT+AGG | - | chr8.2:19130377-19130396 | MS.gene60344:CDS | 25.0% |
!! | GTTAGTTATAGTCTTTTATC+AGG | + | chr8.2:19135213-19135232 | None:intergenic | 25.0% |
!! | GTTATAGTCTTTTATTAGGT+AGG | + | chr8.2:19135122-19135141 | None:intergenic | 25.0% |
!! | TTTATCATGATATTGATGAC+AGG | + | chr8.2:19130924-19130943 | None:intergenic | 25.0% |
!! | TTTCTATATCTTTCTAGCAT+TGG | - | chr8.2:19132399-19132418 | MS.gene60344:CDS | 25.0% |
!! | TTTCTTATTCATTGGGATTT+TGG | - | chr8.2:19133420-19133439 | MS.gene60344:CDS | 25.0% |
!! | TTTTACTGTGTAGGAAAATT+TGG | - | chr8.2:19135313-19135332 | MS.gene60344:intron | 25.0% |
!!! | AATCATCAAAATTCAAGTTG+GGG | - | chr8.2:19134074-19134093 | MS.gene60344:CDS | 25.0% |
!!! | ATTATCATTTTCAAGTTGGA+AGG | + | chr8.2:19134041-19134060 | None:intergenic | 25.0% |
!!! | CCACTTTTAATATCATTTGT+AGG | - | chr8.2:19135491-19135510 | MS.gene60344:intron | 25.0% |
!!! | GAAAAAATAGTAAGTGTTGA+AGG | + | chr8.2:19135293-19135312 | None:intergenic | 25.0% |
!!! | GGATCCCTATTTTTATTTTT+TGG | - | chr8.2:19131652-19131671 | MS.gene60344:intron | 25.0% |
!!! | GTTTTTTAAAAAAGCGTGTT+AGG | + | chr8.2:19132993-19133012 | None:intergenic | 25.0% |
!!! | TCAATTTTAATACCTGGATT+TGG | - | chr8.2:19132248-19132267 | MS.gene60344:intron | 25.0% |
!!! | TGGCTAAAATTTTAAGAATC+AGG | + | chr8.2:19129991-19130010 | None:intergenic | 25.0% |
!!! | TTGTTTTTTCAAATTCTGCT+AGG | + | chr8.2:19133148-19133167 | None:intergenic | 25.0% |
AAAGAAAATCATAAACCCTG+CGG | + | chr8.2:19134902-19134921 | None:intergenic | 30.0% | |
AAAGTGCAACTTTAATCAAG+AGG | + | chr8.2:19131247-19131266 | None:intergenic | 30.0% | |
AACAAAAACAAACACCTTTC+TGG | + | chr8.2:19134811-19134830 | None:intergenic | 30.0% | |
AAGAATGAAGCAAAAAAAGC+AGG | + | chr8.2:19131707-19131726 | None:intergenic | 30.0% | |
AAGAGAAGTAGGAATTAACA+CGG | + | chr8.2:19131124-19131143 | None:intergenic | 30.0% | |
ATCAACTTTGCACAATTCAT+AGG | + | chr8.2:19131536-19131555 | None:intergenic | 30.0% | |
ATTCTGTTATCAGGATTGTT+TGG | - | chr8.2:19134691-19134710 | MS.gene60344:intron | 30.0% | |
ATTGCTAGTATTTGTTTCAC+AGG | - | chr8.2:19132314-19132333 | MS.gene60344:intron | 30.0% | |
CAAATAGTATTAGGGTTTAG+CGG | - | chr8.2:19131796-19131815 | MS.gene60344:intron | 30.0% | |
CAACCCTTCAAATAGTATTA+GGG | - | chr8.2:19131788-19131807 | MS.gene60344:intron | 30.0% | |
CAGAATATGACATTAGATTC+TGG | - | chr8.2:19131614-19131633 | MS.gene60344:intron | 30.0% | |
CATCACTGATGATACTAATA+TGG | + | chr8.2:19132891-19132910 | None:intergenic | 30.0% | |
GATGTAACTATACCAAATAG+AGG | - | chr8.2:19134139-19134158 | MS.gene60344:CDS | 30.0% | |
GCCATAGATATATTGGAATA+TGG | - | chr8.2:19130007-19130026 | MS.gene60344:CDS | 30.0% | |
GCCATATTCCAATATATCTA+TGG | + | chr8.2:19130011-19130030 | None:intergenic | 30.0% | |
GCTCTTATGAATATGTTATC+AGG | - | chr8.2:19133718-19133737 | MS.gene60344:intron | 30.0% | |
GTAGAGGTAATTCCTTTATT+TGG | - | chr8.2:19133542-19133561 | MS.gene60344:intron | 30.0% | |
GTTATGCAGTAAGAAACATT+TGG | + | chr8.2:19129903-19129922 | None:intergenic | 30.0% | |
TACTATATCATTGAACTGCA+AGG | + | chr8.2:19135858-19135877 | None:intergenic | 30.0% | |
TAGATCAGTATTCCTCTATT+TGG | + | chr8.2:19134154-19134173 | None:intergenic | 30.0% | |
TCAAAATCTCTATGATCATG+TGG | + | chr8.2:19134964-19134983 | None:intergenic | 30.0% | |
TCAACCCTTCAAATAGTATT+AGG | - | chr8.2:19131787-19131806 | MS.gene60344:intron | 30.0% | |
TCTTTCTATAAACTCTTTCC+TGG | - | chr8.2:19130089-19130108 | MS.gene60344:intron | 30.0% | |
TTAATATCATTTGTAGGCTC+GGG | - | chr8.2:19135497-19135516 | MS.gene60344:intron | 30.0% | |
TTCTCATACAATACCTCTAT+AGG | + | chr8.2:19131505-19131524 | None:intergenic | 30.0% | |
TTGAAAATAGGGCTCAAAAT+TGG | + | chr8.2:19130583-19130602 | None:intergenic | 30.0% | |
TTTCCTTATAGTGAAAATGC+TGG | - | chr8.2:19134829-19134848 | MS.gene60344:intron | 30.0% | |
! | AAAATGACGCATTTTGTCAT+AGG | - | chr8.2:19132837-19132856 | MS.gene60344:intron | 30.0% |
! | AAATGACGCATTTTGTCATA+GGG | - | chr8.2:19132838-19132857 | MS.gene60344:intron | 30.0% |
! | AACTTGAGAGTATGATAGAA+AGG | - | chr8.2:19135004-19135023 | MS.gene60344:intron | 30.0% |
! | ATGATATTGATGACAGGATA+TGG | + | chr8.2:19130918-19130937 | None:intergenic | 30.0% |
! | CATGTACGTTTTATGCATAT+TGG | - | chr8.2:19135805-19135824 | MS.gene60344:intron | 30.0% |
! | GGCTGAATTTGTTTCTTAAA+TGG | - | chr8.2:19133950-19133969 | MS.gene60344:intron | 30.0% |
! | GTGGAGGGTATATTAATTTA+TGG | - | chr8.2:19134100-19134119 | MS.gene60344:CDS | 30.0% |
! | GTTATAGTCTTTTATCAGGT+AGG | + | chr8.2:19135209-19135228 | None:intergenic | 30.0% |
! | GTTGACTATTTAGAACTACA+TGG | - | chr8.2:19132678-19132697 | MS.gene60344:intron | 30.0% |
! | TACACAGCAATAAATGGTTT+TGG | - | chr8.2:19135626-19135645 | MS.gene60344:intron | 30.0% |
! | TATGCTTTTATTCTCACTGT+TGG | - | chr8.2:19132551-19132570 | MS.gene60344:intron | 30.0% |
! | TATTTTTCTCAAACTACACC+AGG | + | chr8.2:19130110-19130129 | None:intergenic | 30.0% |
! | TGTACATTTTATCTGTGTCA+GGG | - | chr8.2:19134661-19134680 | MS.gene60344:intron | 30.0% |
! | TTCTGGTGCTAAATAAATGT+TGG | - | chr8.2:19131631-19131650 | MS.gene60344:intron | 30.0% |
! | TTTAGGACCAAGTTTGTATT+AGG | - | chr8.2:19135557-19135576 | MS.gene60344:intron | 30.0% |
! | TTTCTTGGTCTTCATATATG+TGG | - | chr8.2:19131873-19131892 | MS.gene60344:intron | 30.0% |
!! | AAGTACTGATAAAACTTTCC+AGG | + | chr8.2:19133913-19133932 | None:intergenic | 30.0% |
!! | ACTTTGGTGTTTGTAAAGAA+CGG | - | chr8.2:19133929-19133948 | MS.gene60344:intron | 30.0% |
!! | ATTTTGTCATAGGGTGTTAT+GGG | - | chr8.2:19132847-19132866 | MS.gene60344:intron | 30.0% |
!! | GATTTGTTAACAATGGTTGA+TGG | - | chr8.2:19132436-19132455 | MS.gene60344:CDS | 30.0% |
!! | GGAAAGTTTTATCAGTACTT+TGG | - | chr8.2:19133913-19133932 | MS.gene60344:intron | 30.0% |
!! | GGAACAAGATTTGTTAACAA+TGG | - | chr8.2:19132429-19132448 | MS.gene60344:CDS | 30.0% |
!! | TCCTTTTGAACTTCTTGTTT+TGG | - | chr8.2:19130613-19130632 | MS.gene60344:intron | 30.0% |
!!! | GAGCTTTTATTGCTGTTTAT+CGG | - | chr8.2:19134484-19134503 | MS.gene60344:CDS | 30.0% |
AAACCAACAAGAGATACCAA+AGG | + | chr8.2:19132137-19132156 | None:intergenic | 35.0% | |
AACAAAGGATGTCATCATCA+TGG | + | chr8.2:19133516-19133535 | None:intergenic | 35.0% | |
AACGAGTACACAGCAATAAA+TGG | - | chr8.2:19135620-19135639 | MS.gene60344:intron | 35.0% | |
AAGCTCTATATATAGAGCCT+GGG | - | chr8.2:19135080-19135099 | MS.gene60344:intron | 35.0% | |
AAGTTGAGCTTGCATCATTT+GGG | + | chr8.2:19132079-19132098 | None:intergenic | 35.0% | |
AATAATCAGCCATGATGCTA+AGG | + | chr8.2:19133848-19133867 | None:intergenic | 35.0% | |
AATACTAGCAATACAAGCTC+TGG | + | chr8.2:19132306-19132325 | None:intergenic | 35.0% | |
AATCAACCTCTTTCTTTCTC+GGG | - | chr8.2:19130960-19130979 | MS.gene60344:intron | 35.0% | |
AATTCTTGAACCTTAGAGCA+TGG | - | chr8.2:19133341-19133360 | MS.gene60344:CDS | 35.0% | |
ACAATATCGATCATTCTTGC+TGG | - | chr8.2:19131457-19131476 | MS.gene60344:intron | 35.0% | |
ACTTCTTGTGTCAGTCTTAA+AGG | + | chr8.2:19136008-19136027 | None:intergenic | 35.0% | |
ACTTGGTCCTAAAACTATTG+AGG | + | chr8.2:19135550-19135569 | None:intergenic | 35.0% | |
AGAATGATCGATATTGTTGC+TGG | + | chr8.2:19131454-19131473 | None:intergenic | 35.0% | |
AGTTCCGTATCCATTTCAAT+GGG | - | chr8.2:19133457-19133476 | MS.gene60344:intron | 35.0% | |
ATCTTTCTTATGCTCCACTT+TGG | + | chr8.2:19131910-19131929 | None:intergenic | 35.0% | |
ATGTTGGAAACCAAGAAGTA+TGG | + | chr8.2:19131079-19131098 | None:intergenic | 35.0% | |
CAACATTATCTTGTGATGCT+GGG | - | chr8.2:19131093-19131112 | MS.gene60344:intron | 35.0% | |
CCGTGAACAAAACAGAAAAA+CGG | + | chr8.2:19132514-19132533 | None:intergenic | 35.0% | |
CTTAAATGGCAATTGCAACA+CGG | - | chr8.2:19133964-19133983 | MS.gene60344:intron | 35.0% | |
GAATCAACCTCTTTCTTTCT+CGG | - | chr8.2:19130959-19130978 | MS.gene60344:intron | 35.0% | |
GATAGATAAACCCAAGAAGA+TGG | + | chr8.2:19135588-19135607 | None:intergenic | 35.0% | |
GCCAAAACAAGAAGTTCAAA+AGG | + | chr8.2:19130617-19130636 | None:intergenic | 35.0% | |
GTAGATATGACTGATACATC+TGG | - | chr8.2:19130995-19131014 | MS.gene60344:CDS | 35.0% | |
GTATCATCAGTGATGCTTTA+TGG | - | chr8.2:19132896-19132915 | MS.gene60344:intron | 35.0% | |
GTGAAGAAAAATTCACTCGA+GGG | - | chr8.2:19134243-19134262 | MS.gene60344:intron | 35.0% | |
GTTCTTACTTTGCATGTGAT+TGG | - | chr8.2:19130548-19130567 | MS.gene60344:CDS | 35.0% | |
TAATTGCCGTGTTTGTATGA+AGG | - | chr8.2:19130488-19130507 | MS.gene60344:intron | 35.0% | |
TACAATACCTCTATAGGATC+CGG | + | chr8.2:19131499-19131518 | None:intergenic | 35.0% | |
TATCCAAACACTACTCTTTG+TGG | - | chr8.2:19131351-19131370 | MS.gene60344:CDS | 35.0% | |
TATGCTCTCTGTTCAGATTA+TGG | + | chr8.2:19131578-19131597 | None:intergenic | 35.0% | |
TCTCATGAATAAGTACGAGT+TGG | + | chr8.2:19135148-19135167 | None:intergenic | 35.0% | |
TGCTTGTTCTTTGCTTATGT+CGG | - | chr8.2:19135382-19135401 | MS.gene60344:intron | 35.0% | |
TGCTTTATGGAGTTGAGAAT+TGG | - | chr8.2:19132909-19132928 | MS.gene60344:intron | 35.0% | |
TGGAGTTGTTGCATATTTCT+TGG | - | chr8.2:19135910-19135929 | MS.gene60344:intron | 35.0% | |
TGTACGTTTAACGTGGTTAT+AGG | + | chr8.2:19132582-19132601 | None:intergenic | 35.0% | |
TGTGAAGAAAAATTCACTCG+AGG | - | chr8.2:19134242-19134261 | MS.gene60344:intron | 35.0% | |
TTAAATGGCAATTGCAACAC+GGG | - | chr8.2:19133965-19133984 | MS.gene60344:intron | 35.0% | |
! | AGACCAGCATTTTCACTATA+AGG | + | chr8.2:19134835-19134854 | None:intergenic | 35.0% |
! | ATTTGTTACATGCAGTCTAG+TGG | - | chr8.2:19134462-19134481 | MS.gene60344:CDS | 35.0% |
! | CTGTACATTTTATCTGTGTC+AGG | - | chr8.2:19134660-19134679 | MS.gene60344:intron | 35.0% |
! | CTTTTATTCTCACTGTTGGA+GGG | - | chr8.2:19132555-19132574 | MS.gene60344:intron | 35.0% |
! | GACAACTGACTTTAGTGAAA+TGG | - | chr8.2:19133785-19133804 | MS.gene60344:intron | 35.0% |
! | TCTGCAACCTCAATAGTTTT+AGG | - | chr8.2:19135540-19135559 | MS.gene60344:intron | 35.0% |
! | TGGCTGTGTTATTACTTTCT+TGG | - | chr8.2:19131858-19131877 | MS.gene60344:intron | 35.0% |
! | TTATCAGGATTGTTTGGAAC+TGG | - | chr8.2:19134697-19134716 | MS.gene60344:intron | 35.0% |
! | TTGATGACAGGATATGGTAA+TGG | + | chr8.2:19130912-19130931 | None:intergenic | 35.0% |
! | TTTTATTCTCACTGTTGGAG+GGG | - | chr8.2:19132556-19132575 | MS.gene60344:intron | 35.0% |
!! | AAAATTCAAGTTGGGGATAG+TGG | - | chr8.2:19134081-19134100 | MS.gene60344:CDS | 35.0% |
!! | ACGAAAGCTTTTGATTGGAA+CGG | + | chr8.2:19135887-19135906 | None:intergenic | 35.0% |
!! | CATTTTGTCATAGGGTGTTA+TGG | - | chr8.2:19132846-19132865 | MS.gene60344:intron | 35.0% |
!! | CCGTTTTTCTGTTTTGTTCA+CGG | - | chr8.2:19132511-19132530 | MS.gene60344:intron | 35.0% |
!! | GATGACATTCTGAGATTATC+TGG | - | chr8.2:19134330-19134349 | MS.gene60344:intron | 35.0% |
!! | TTAATACCTGGATTTGGTGT+AGG | - | chr8.2:19132254-19132273 | MS.gene60344:intron | 35.0% |
!! | TTTTGTCATAGGGTGTTATG+GGG | - | chr8.2:19132848-19132867 | MS.gene60344:intron | 35.0% |
!!! | CAAGTCCATGTTTTTTTTGC+AGG | - | chr8.2:19131312-19131331 | MS.gene60344:intron | 35.0% |
!!! | TAGTGAAAATGCTGGTCTTT+TGG | - | chr8.2:19134837-19134856 | MS.gene60344:intron | 35.0% |
!!! | TGGTATCTCTTGTTGGTTTT+GGG | - | chr8.2:19132138-19132157 | MS.gene60344:intron | 35.0% |
!!! | TTGGTATCTCTTGTTGGTTT+TGG | - | chr8.2:19132137-19132156 | MS.gene60344:intron | 35.0% |
AAGGCTTGTGAATATGACAC+AGG | + | chr8.2:19135774-19135793 | None:intergenic | 40.0% | |
AATCTGGTACCTTAGCATCA+TGG | - | chr8.2:19133836-19133855 | MS.gene60344:intron | 40.0% | |
ACAGTAACACTACCATGTGT+CGG | + | chr8.2:19134304-19134323 | None:intergenic | 40.0% | |
ACATTGGTGCAAACGTTGTT+TGG | - | chr8.2:19131385-19131404 | MS.gene60344:CDS | 40.0% | |
ACATTTGGAAGCTGATCCTT+CGG | + | chr8.2:19129888-19129907 | None:intergenic | 40.0% | |
ACTCATGACTTAATCGCTGA+AGG | + | chr8.2:19130258-19130277 | None:intergenic | 40.0% | |
AGCTCTATATATAGAGCCTG+GGG | - | chr8.2:19135081-19135100 | MS.gene60344:intron | 40.0% | |
AGGCTTGTGAATATGACACA+GGG | + | chr8.2:19135773-19135792 | None:intergenic | 40.0% | |
AGTCACACTTCACTTATCTC+CGG | + | chr8.2:19130439-19130458 | None:intergenic | 40.0% | |
ATCCTTTGTTGCTCTAGTAG+AGG | - | chr8.2:19133526-19133545 | MS.gene60344:intron | 40.0% | |
ATGAAATCCACAACTCACCA+TGG | + | chr8.2:19132653-19132672 | None:intergenic | 40.0% | |
ATGTAAAGTAACTCACGCCA+AGG | + | chr8.2:19129936-19129955 | None:intergenic | 40.0% | |
ATTAGGCTTCTCCATCTTCT+TGG | - | chr8.2:19135574-19135593 | MS.gene60344:intron | 40.0% | |
CAAGCTCAACTTCTTTCTTC+AGG | - | chr8.2:19132087-19132106 | MS.gene60344:intron | 40.0% | |
CAATCAAAAGCTTTCGTTGC+TGG | - | chr8.2:19135890-19135909 | MS.gene60344:intron | 40.0% | |
CAATTTGCAATCGAGAATGC+TGG | - | chr8.2:19133278-19133297 | MS.gene60344:CDS | 40.0% | |
CCAACATTATCTTGTGATGC+TGG | - | chr8.2:19131092-19131111 | MS.gene60344:intron | 40.0% | |
CCAAGTCCTTCATACAAACA+CGG | + | chr8.2:19130497-19130516 | None:intergenic | 40.0% | |
CCAGCATCACAAGATAATGT+TGG | + | chr8.2:19131095-19131114 | None:intergenic | 40.0% | |
CGTACATGACAAGAAACTCA+AGG | + | chr8.2:19135793-19135812 | None:intergenic | 40.0% | |
CTCCTCCTGCAAAAAAAACA+TGG | + | chr8.2:19131320-19131339 | None:intergenic | 40.0% | |
CTTTGCATGTGATTGGAAGT+TGG | - | chr8.2:19130555-19130574 | MS.gene60344:CDS | 40.0% | |
GAAGCTCTATATATAGAGCC+TGG | - | chr8.2:19135079-19135098 | MS.gene60344:intron | 40.0% | |
GAAGTTGAGCTTGCATCATT+TGG | + | chr8.2:19132080-19132099 | None:intergenic | 40.0% | |
GAGTTCCGTATCCATTTCAA+TGG | - | chr8.2:19133456-19133475 | MS.gene60344:intron | 40.0% | |
GCTTCCTTTCCTAAGTGAAA+TGG | - | chr8.2:19130311-19130330 | MS.gene60344:CDS | 40.0% | |
GGAGAAGCCTAATACAAACT+TGG | + | chr8.2:19135567-19135586 | None:intergenic | 40.0% | |
GTAGTTAGTTAATTTCCCCC+AGG | + | chr8.2:19135100-19135119 | None:intergenic | 40.0% | |
GTTCCGTATCCATTTCAATG+GGG | - | chr8.2:19133458-19133477 | MS.gene60344:intron | 40.0% | |
GTTCCTTTGGTATCTCTTGT+TGG | - | chr8.2:19132131-19132150 | MS.gene60344:intron | 40.0% | |
GTTGCTAAGTGTGTAGAGAT+TGG | - | chr8.2:19132276-19132295 | MS.gene60344:intron | 40.0% | |
TACCACCATCCATTCTTAGT+CGG | - | chr8.2:19134526-19134545 | MS.gene60344:CDS | 40.0% | |
TACCTCTACTAGAGCAACAA+AGG | + | chr8.2:19133531-19133550 | None:intergenic | 40.0% | |
TATTAGGGTTTAGCGGTCTT+TGG | - | chr8.2:19131803-19131822 | MS.gene60344:intron | 40.0% | |
TCTATACTTAGCAAGGCATG+TGG | - | chr8.2:19130189-19130208 | MS.gene60344:intron | 40.0% | |
TGTATGAGTTAGGCTTTCCT+GGG | - | chr8.2:19132162-19132181 | MS.gene60344:intron | 40.0% | |
TTAGGCTTCTCCATCTTCTT+GGG | - | chr8.2:19135575-19135594 | MS.gene60344:intron | 40.0% | |
TTGAAGGAAAGATGCGTACT+TGG | + | chr8.2:19135277-19135296 | None:intergenic | 40.0% | |
! | AAAAATCTAGGGCTGAAGTC+AGG | - | chr8.2:19133879-19133898 | MS.gene60344:intron | 40.0% |
! | CAGCAACGAAAGCTTTTGAT+TGG | + | chr8.2:19135892-19135911 | None:intergenic | 40.0% |
! | CATTGGGATTTTGGATTTGC+AGG | - | chr8.2:19133429-19133448 | MS.gene60344:intron | 40.0% |
! | CGAAGACATGTTTTCCTGAA+TGG | + | chr8.2:19132490-19132509 | None:intergenic | 40.0% |
! | CTAAGAATGGATGGTGGTAA+TGG | + | chr8.2:19134525-19134544 | None:intergenic | 40.0% |
! | GCTTTTATTCTCACTGTTGG+AGG | - | chr8.2:19132554-19132573 | MS.gene60344:intron | 40.0% |
! | TCAAAAGCATGAATGGCTTG+TGG | + | chr8.2:19135434-19135453 | None:intergenic | 40.0% |
! | TGTATGAAGGACTTGGTTTC+TGG | - | chr8.2:19130501-19130520 | MS.gene60344:intron | 40.0% |
! | TTTGTCATAGGGTGTTATGG+GGG | - | chr8.2:19132849-19132868 | MS.gene60344:intron | 40.0% |
! | TTTTATCTGTGTCAGGGTGT+CGG | - | chr8.2:19134667-19134686 | MS.gene60344:intron | 40.0% |
! | TTTTCCTGAATGGAGCACAT+GGG | + | chr8.2:19132480-19132499 | None:intergenic | 40.0% |
!! | AGGTTGGTCTCAAGTTTAAG+TGG | - | chr8.2:19131838-19131857 | MS.gene60344:intron | 40.0% |
!! | CTTTCTAGCATTGGTTTCTG+TGG | - | chr8.2:19132408-19132427 | MS.gene60344:CDS | 40.0% |
!! | TGAAATGGCGCTGGTTAATT+TGG | - | chr8.2:19130326-19130345 | MS.gene60344:CDS | 40.0% |
!! | TGTACTCGTTGAAGTACTGT+GGG | + | chr8.2:19135610-19135629 | None:intergenic | 40.0% |
!!! | GTCCATGTTTTTTTTGCAGG+AGG | - | chr8.2:19131315-19131334 | MS.gene60344:intron | 40.0% |
!!! | TGAAGTCAGGTTTTTAGTCC+TGG | - | chr8.2:19133892-19133911 | MS.gene60344:intron | 40.0% |
AATATGACACAGGGCACATG+GGG | + | chr8.2:19135764-19135783 | None:intergenic | 45.0% | |
ACACCTGACTGATACTTGAC+CGG | - | chr8.2:19130417-19130436 | MS.gene60344:intron | 45.0% | |
ACCAATACCCCGACTAAGAA+TGG | + | chr8.2:19134538-19134557 | None:intergenic | 45.0% | |
ACCACCATCCATTCTTAGTC+GGG | - | chr8.2:19134527-19134546 | MS.gene60344:CDS | 45.0% | |
ACCATGGAGCAGCATCTATT+AGG | + | chr8.2:19132637-19132656 | None:intergenic | 45.0% | |
ACTTCTCTTGTTCCCCAGAT+GGG | - | chr8.2:19131135-19131154 | MS.gene60344:intron | 45.0% | |
AGAGTGGTTCAAATATCCGC+AGG | - | chr8.2:19134883-19134902 | MS.gene60344:intron | 45.0% | |
AGCGCCATTTCACTTAGGAA+AGG | + | chr8.2:19130318-19130337 | None:intergenic | 45.0% | |
AGTGAGTGCACCACAACTTA+AGG | + | chr8.2:19132746-19132765 | None:intergenic | 45.0% | |
ATAAGAGCCTCCGATTACTG+CGG | + | chr8.2:19131422-19131441 | None:intergenic | 45.0% | |
ATACCCCGACTAAGAATGGA+TGG | + | chr8.2:19134534-19134553 | None:intergenic | 45.0% | |
ATACTTAGCAAGGCATGTGG+AGG | - | chr8.2:19130192-19130211 | MS.gene60344:intron | 45.0% | |
ATATCATTTGTAGGCTCGGG+AGG | - | chr8.2:19135500-19135519 | MS.gene60344:intron | 45.0% | |
ATCTGGGGAACAAGAGAAGT+AGG | + | chr8.2:19131135-19131154 | None:intergenic | 45.0% | |
CAAACACTACTCTTTGTGGC+TGG | - | chr8.2:19131355-19131374 | MS.gene60344:CDS | 45.0% | |
CACCACAACTTAAGGACACT+GGG | + | chr8.2:19132738-19132757 | None:intergenic | 45.0% | |
CAGCCACAAAGAGTAGTGTT+TGG | + | chr8.2:19131357-19131376 | None:intergenic | 45.0% | |
CAGTAACACTACCATGTGTC+GGG | + | chr8.2:19134303-19134322 | None:intergenic | 45.0% | |
CAGTATAGTGCAGCGACAAT+GGG | + | chr8.2:19135364-19135383 | None:intergenic | 45.0% | |
CCGTGTTTGTATGAAGGACT+TGG | - | chr8.2:19130494-19130513 | MS.gene60344:intron | 45.0% | |
CGATATTGTTGCTGGAACGA+AGG | + | chr8.2:19131446-19131465 | None:intergenic | 45.0% | |
CTAAAATTTGGCCCGACACA+TGG | - | chr8.2:19134289-19134308 | MS.gene60344:intron | 45.0% | |
CTAGATCCCGAGAAAGAAAG+AGG | + | chr8.2:19130969-19130988 | None:intergenic | 45.0% | |
CTCTTTCTTTCTCGGGATCT+AGG | - | chr8.2:19130967-19130986 | MS.gene60344:intron | 45.0% | |
CTGTATGAGTTAGGCTTTCC+TGG | - | chr8.2:19132161-19132180 | MS.gene60344:intron | 45.0% | |
CTTCGCCTGCATCAAATGAA+GGG | + | chr8.2:19133487-19133506 | None:intergenic | 45.0% | |
GAATATGACACAGGGCACAT+GGG | + | chr8.2:19135765-19135784 | None:intergenic | 45.0% | |
GAGTGGTTCAAATATCCGCA+GGG | - | chr8.2:19134884-19134903 | MS.gene60344:intron | 45.0% | |
GCACCCCATTGAAATGGATA+CGG | + | chr8.2:19133464-19133483 | None:intergenic | 45.0% | |
GCTCTATATATAGAGCCTGG+GGG | - | chr8.2:19135082-19135101 | MS.gene60344:intron | 45.0% | |
GCTCTCTGTTCAGATTATGG+CGG | + | chr8.2:19131575-19131594 | None:intergenic | 45.0% | |
GGATGTCATCATCATGGCAA+AGG | + | chr8.2:19133510-19133529 | None:intergenic | 45.0% | |
GGTTGTGGTTCATCTGCTTT+CGG | + | chr8.2:19129858-19129877 | None:intergenic | 45.0% | |
GTATGAGTTAGGCTTTCCTG+GGG | - | chr8.2:19132163-19132182 | MS.gene60344:intron | 45.0% | |
GTCTTTGGCGAAATGTTGCA+AGG | - | chr8.2:19131818-19131837 | MS.gene60344:intron | 45.0% | |
TAAAGTAACTCACGCCAAGG+TGG | + | chr8.2:19129933-19129952 | None:intergenic | 45.0% | |
TAACCAGCGCCATTTCACTT+AGG | + | chr8.2:19130323-19130342 | None:intergenic | 45.0% | |
TACTTCTCTTGTTCCCCAGA+TGG | - | chr8.2:19131134-19131153 | MS.gene60344:intron | 45.0% | |
TAGCAACCTACACCAAATCC+AGG | + | chr8.2:19132263-19132282 | None:intergenic | 45.0% | |
TCCATTCTTAGTCGGGGTAT+TGG | - | chr8.2:19134534-19134553 | MS.gene60344:CDS | 45.0% | |
TCTGCGTTGTACGTTTAACG+TGG | + | chr8.2:19132589-19132608 | None:intergenic | 45.0% | |
TCTGCTATTCGGAAAGACAG+AGG | - | chr8.2:19135956-19135975 | MS.gene60344:intron | 45.0% | |
TCTGTTGTGTCCATGCTCTA+AGG | + | chr8.2:19133354-19133373 | None:intergenic | 45.0% | |
TGAATATGACACAGGGCACA+TGG | + | chr8.2:19135766-19135785 | None:intergenic | 45.0% | |
TGCATTGCAGCAAGACATCT+AGG | - | chr8.2:19133742-19133761 | MS.gene60344:CDS | 45.0% | |
TGGCTTGAACATGTCCAAAG+TGG | - | chr8.2:19131893-19131912 | MS.gene60344:intron | 45.0% | |
TGTGGCTGGAATCAACACAT+TGG | - | chr8.2:19131369-19131388 | MS.gene60344:CDS | 45.0% | |
TGTTCACGGTTGCAATTGTG+TGG | - | chr8.2:19132525-19132544 | MS.gene60344:intron | 45.0% | |
TTAGGCCTGAACTATCAGTG+CGG | + | chr8.2:19132619-19132638 | None:intergenic | 45.0% | |
TTCGCCTGCATCAAATGAAG+GGG | + | chr8.2:19133486-19133505 | None:intergenic | 45.0% | |
TTGGCGAAATGTTGCAAGGT+TGG | - | chr8.2:19131822-19131841 | MS.gene60344:intron | 45.0% | |
TTTCCTAAGTGAAATGGCGC+TGG | - | chr8.2:19130317-19130336 | MS.gene60344:CDS | 45.0% | |
TTTCCTGAATGGAGCACATG+GGG | + | chr8.2:19132479-19132498 | None:intergenic | 45.0% | |
! | AACCCAGTGTCCTTAAGTTG+TGG | - | chr8.2:19132733-19132752 | MS.gene60344:intron | 45.0% |
! | GGAAAGACAGAGGAAAGCAT+TGG | - | chr8.2:19135966-19135985 | MS.gene60344:intron | 45.0% |
! | GGATTGTTTGGAACTGGCAT+TGG | - | chr8.2:19134703-19134722 | MS.gene60344:intron | 45.0% |
! | GTTTTCCTGAATGGAGCACA+TGG | + | chr8.2:19132481-19132500 | None:intergenic | 45.0% |
! | TGCAGTCGACAGCTTTTGAT+TGG | - | chr8.2:19130856-19130875 | MS.gene60344:intron | 45.0% |
!! | AAGACAGAGGAAAGCATTGG+TGG | - | chr8.2:19135969-19135988 | MS.gene60344:intron | 45.0% |
!! | ACACCTTTCTGGAGTCAACA+AGG | + | chr8.2:19134800-19134819 | None:intergenic | 45.0% |
!! | AGACAGAGGAAAGCATTGGT+GGG | - | chr8.2:19135970-19135989 | MS.gene60344:intron | 45.0% |
!! | AGCATTGGTGGGATAAGTAC+AGG | - | chr8.2:19135981-19136000 | MS.gene60344:CDS | 45.0% |
!! | AGCGTGTTAGGAGCATTTCT+CGG | + | chr8.2:19132981-19133000 | None:intergenic | 45.0% |
!! | ATTCAAGTTGGGGATAGTGG+AGG | - | chr8.2:19134084-19134103 | MS.gene60344:CDS | 45.0% |
!! | CATCCTTGTTGACTCCAGAA+AGG | - | chr8.2:19134794-19134813 | MS.gene60344:CDS | 45.0% |
!! | GTGTACTCGTTGAAGTACTG+TGG | + | chr8.2:19135611-19135630 | None:intergenic | 45.0% |
!! | TTCAAGTTGGGGATAGTGGA+GGG | - | chr8.2:19134085-19134104 | MS.gene60344:CDS | 45.0% |
!! | TTCTTAGTCGGGGTATTGGT+TGG | - | chr8.2:19134538-19134557 | MS.gene60344:CDS | 45.0% |
!!! | GGTTTTGGGCTGTATGAGTT+AGG | - | chr8.2:19132152-19132171 | MS.gene60344:intron | 45.0% |
!! | AAATTAAATTAATATTCTTA+AGG | - | chr8.2:19131180-19131199 | MS.gene60344:CDS | 5.0% |
AAGATAATGCGGGCAACCCA+AGG | - | chr8.2:19131748-19131767 | MS.gene60344:intron | 50.0% | |
ACCAAAGGAACTGCTGAGAG+TGG | + | chr8.2:19132122-19132141 | None:intergenic | 50.0% | |
AGTTCACACCGGAGCAAGAT+GGG | - | chr8.2:19135652-19135671 | MS.gene60344:intron | 50.0% | |
ATAGTGCAGCGACAATGGGA+GGG | + | chr8.2:19135360-19135379 | None:intergenic | 50.0% | |
CCACCATCCATTCTTAGTCG+GGG | - | chr8.2:19134528-19134547 | MS.gene60344:CDS | 50.0% | |
GCACCACAACTTAAGGACAC+TGG | + | chr8.2:19132739-19132758 | None:intergenic | 50.0% | |
GCAGTATAGTGCAGCGACAA+TGG | + | chr8.2:19135365-19135384 | None:intergenic | 50.0% | |
GCATAACAAGTCCTCCACCT+TGG | - | chr8.2:19129916-19129935 | MS.gene60344:CDS | 50.0% | |
GCCTAATAGATGCTGCTCCA+TGG | - | chr8.2:19132633-19132652 | MS.gene60344:intron | 50.0% | |
GCTTCGCCTGCATCAAATGA+AGG | + | chr8.2:19133488-19133507 | None:intergenic | 50.0% | |
TAAGAGCCTCCGATTACTGC+GGG | + | chr8.2:19131421-19131440 | None:intergenic | 50.0% | |
TACATTGCCACCTCCCATCT+GGG | + | chr8.2:19131151-19131170 | None:intergenic | 50.0% | |
TATAGTGCAGCGACAATGGG+AGG | + | chr8.2:19135361-19135380 | None:intergenic | 50.0% | |
TCCACTCTCAGCAGTTCCTT+TGG | - | chr8.2:19132118-19132137 | MS.gene60344:intron | 50.0% | |
TCTCCGGTCAAGTATCAGTC+AGG | + | chr8.2:19130423-19130442 | None:intergenic | 50.0% | |
TTACATTGCCACCTCCCATC+TGG | + | chr8.2:19131152-19131171 | None:intergenic | 50.0% | |
TTTGGAAGCTGATCCTTCGG+TGG | + | chr8.2:19129885-19129904 | None:intergenic | 50.0% | |
! | AAGCGACAATTAGAGCGCCT+TGG | + | chr8.2:19131768-19131787 | None:intergenic | 50.0% |
! | AGCGACAATTAGAGCGCCTT+GGG | + | chr8.2:19131767-19131786 | None:intergenic | 50.0% |
! | TGGTCGATTCAATGACGAGC+CGG | - | chr8.2:19131477-19131496 | MS.gene60344:intron | 50.0% |
!! | GCGCTGGTTAATTTGGACTC+TGG | - | chr8.2:19130333-19130352 | MS.gene60344:CDS | 50.0% |
!! | GGTGTCGGCATTCTGTTATC+AGG | - | chr8.2:19134682-19134701 | MS.gene60344:intron | 50.0% |
!! | GGTTTTGGTCCAGTTCACAC+CGG | - | chr8.2:19135641-19135660 | MS.gene60344:intron | 50.0% |
!!! | CTTTTGGCTTTGACACGCGT+CGG | - | chr8.2:19134853-19134872 | MS.gene60344:intron | 50.0% |
ACACCGGAGCAAGATGGGTA+TGG | - | chr8.2:19135657-19135676 | MS.gene60344:intron | 55.0% | |
ACATTGCCACCTCCCATCTG+GGG | + | chr8.2:19131150-19131169 | None:intergenic | 55.0% | |
AGCCGATTGCCCGCAGTAAT+CGG | - | chr8.2:19131409-19131428 | MS.gene60344:CDS | 55.0% | |
AGCTGATCCTTCGGTGGATG+CGG | + | chr8.2:19129879-19129898 | None:intergenic | 55.0% | |
AGTAACTCACGCCAAGGTGG+AGG | + | chr8.2:19129930-19129949 | None:intergenic | 55.0% | |
CAGTTCACACCGGAGCAAGA+TGG | - | chr8.2:19135651-19135670 | MS.gene60344:intron | 55.0% | |
CATCTTGCTCCGGTGTGAAC+TGG | + | chr8.2:19135653-19135672 | None:intergenic | 55.0% | |
CCCCGACTAAGAATGGATGG+TGG | + | chr8.2:19134531-19134550 | None:intergenic | 55.0% | |
CTCCGATTACTGCGGGCAAT+CGG | + | chr8.2:19131414-19131433 | None:intergenic | 55.0% | |
GAGCCATACCCATCTTGCTC+CGG | + | chr8.2:19135663-19135682 | None:intergenic | 55.0% | |
GCAGCTGAGGCCATACTTCT+TGG | - | chr8.2:19131066-19131085 | MS.gene60344:intron | 55.0% | |
GGTGCCCCTTCATTTGATGC+AGG | - | chr8.2:19133479-19133498 | MS.gene60344:intron | 55.0% | |
GTACCCCATGTGCTCCATTC+AGG | - | chr8.2:19132473-19132492 | MS.gene60344:intron | 55.0% | |
TAGTGCAGCGACAATGGGAG+GGG | + | chr8.2:19135359-19135378 | None:intergenic | 55.0% | |
TCTCTTGTTCCCCAGATGGG+AGG | - | chr8.2:19131138-19131157 | MS.gene60344:intron | 55.0% | |
TGACGAGCCGGATCCTATAG+AGG | - | chr8.2:19131489-19131508 | MS.gene60344:intron | 55.0% | |
TGCAGCATAAGGCTTACCCC+AGG | + | chr8.2:19132182-19132201 | None:intergenic | 55.0% | |
TGCTGCTCCATGGTGAGTTG+TGG | - | chr8.2:19132643-19132662 | MS.gene60344:intron | 55.0% | |
! | ACCTGCCGCACTGATAGTTC+AGG | - | chr8.2:19132611-19132630 | MS.gene60344:intron | 55.0% |
!! | GAAGGGGCACCCCATTGAAA+TGG | + | chr8.2:19133470-19133489 | None:intergenic | 55.0% |
!! | GGGGCATTTTGATGCAGCTG+AGG | - | chr8.2:19131053-19131072 | MS.gene60344:CDS | 55.0% |
!! | TAGTCGGGGTATTGGTTGGC+AGG | - | chr8.2:19134542-19134561 | MS.gene60344:CDS | 55.0% |
ACCACAACCGCATCCACCGA+AGG | - | chr8.2:19129869-19129888 | MS.gene60344:CDS | 60.0% | |
AGCGACAATGGGAGGGGGAA+TGG | + | chr8.2:19135353-19135372 | None:intergenic | 60.0% | |
AGTGCAGCGACAATGGGAGG+GGG | + | chr8.2:19135358-19135377 | None:intergenic | 60.0% | |
CGATTGCCCGCAGTAATCGG+AGG | - | chr8.2:19131412-19131431 | MS.gene60344:CDS | 60.0% | |
CTTGTTCCCCAGATGGGAGG+TGG | - | chr8.2:19131141-19131160 | MS.gene60344:intron | 60.0% | |
GCCTGAACTATCAGTGCGGC+AGG | + | chr8.2:19132615-19132634 | None:intergenic | 60.0% | |
GGTTCATCTGCTTTCGGCGC+CGG | + | chr8.2:19129852-19129871 | None:intergenic | 60.0% | |
TCCTTCGGTGGATGCGGTTG+TGG | + | chr8.2:19129873-19129892 | None:intergenic | 60.0% | |
! | ACGCGTCGGCAGTCGAAGAG+TGG | - | chr8.2:19134867-19134886 | MS.gene60344:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 19129831 | 19136081 | 19129831 | ID=MS.gene60344 |
chr8.2 | mRNA | 19129831 | 19136081 | 19129831 | ID=MS.gene60344.t1;Parent=MS.gene60344 |
chr8.2 | exon | 19135973 | 19136081 | 19135973 | ID=MS.gene60344.t1.exon1;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19135973 | 19136081 | 19135973 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
chr8.2 | exon | 19134745 | 19134842 | 19134745 | ID=MS.gene60344.t1.exon2;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19134745 | 19134842 | 19134745 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
chr8.2 | exon | 19134402 | 19134578 | 19134402 | ID=MS.gene60344.t1.exon3;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19134402 | 19134578 | 19134402 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
chr8.2 | exon | 19134073 | 19134173 | 19134073 | ID=MS.gene60344.t1.exon4;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19134073 | 19134173 | 19134073 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
chr8.2 | exon | 19133728 | 19133803 | 19133728 | ID=MS.gene60344.t1.exon5;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19133728 | 19133803 | 19133728 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
chr8.2 | exon | 19133577 | 19133636 | 19133577 | ID=MS.gene60344.t1.exon6;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19133577 | 19133636 | 19133577 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
chr8.2 | exon | 19133258 | 19133442 | 19133258 | ID=MS.gene60344.t1.exon7;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19133258 | 19133442 | 19133258 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
chr8.2 | exon | 19132365 | 19132461 | 19132365 | ID=MS.gene60344.t1.exon8;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19132365 | 19132461 | 19132365 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
chr8.2 | exon | 19131349 | 19131435 | 19131349 | ID=MS.gene60344.t1.exon9;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19131349 | 19131435 | 19131349 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
chr8.2 | exon | 19131172 | 19131230 | 19131172 | ID=MS.gene60344.t1.exon10;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19131172 | 19131230 | 19131172 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
chr8.2 | exon | 19130981 | 19131072 | 19130981 | ID=MS.gene60344.t1.exon11;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19130981 | 19131072 | 19130981 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
chr8.2 | exon | 19130509 | 19130586 | 19130509 | ID=MS.gene60344.t1.exon12;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19130509 | 19130586 | 19130509 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
chr8.2 | exon | 19130239 | 19130399 | 19130239 | ID=MS.gene60344.t1.exon13;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19130239 | 19130399 | 19130239 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
chr8.2 | exon | 19129831 | 19130049 | 19129831 | ID=MS.gene60344.t1.exon14;Parent=MS.gene60344.t1 |
chr8.2 | CDS | 19129831 | 19130049 | 19129831 | ID=cds.MS.gene60344.t1;Parent=MS.gene60344.t1 |
Gene Sequence |
Protein sequence |