Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015069.t1 | XP_013461794.1 | 97.1 | 522 | 15 | 0 | 35 | 556 | 33 | 554 | 4.60E-293 | 1016.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015069.t1 | O04472 | 63.5 | 521 | 180 | 3 | 44 | 555 | 21 | 540 | 7.9e-201 | 701.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015069.t1 | A0A072V1F4 | 97.1 | 522 | 15 | 0 | 35 | 556 | 33 | 554 | 3.3e-293 | 1016.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene43290 | MS.gene015069 | PPI |
| MS.gene70604 | MS.gene015069 | PPI |
| MS.gene022275 | MS.gene015069 | PPI |
| MS.gene96701 | MS.gene015069 | PPI |
| MS.gene25932 | MS.gene015069 | PPI |
| MS.gene86930 | MS.gene015069 | PPI |
| MS.gene033221 | MS.gene015069 | PPI |
| MS.gene074377 | MS.gene015069 | PPI |
| MS.gene71606 | MS.gene015069 | PPI |
| MS.gene60344 | MS.gene015069 | PPI |
| MS.gene015069 | MS.gene91317 | PPI |
| MS.gene56947 | MS.gene015069 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015069.t1 | MTR_3g103230 | 96.942 | 556 | 15 | 1 | 1 | 556 | 1 | 554 | 0.0 | 1105 |
| MS.gene015069.t1 | MTR_5g022110 | 73.381 | 556 | 139 | 1 | 1 | 556 | 1 | 547 | 0.0 | 837 |
| MS.gene015069.t1 | MTR_8g063220 | 61.568 | 523 | 196 | 2 | 37 | 556 | 13 | 533 | 0.0 | 681 |
| MS.gene015069.t1 | MTR_3g078270 | 59.619 | 525 | 208 | 2 | 35 | 556 | 9 | 532 | 0.0 | 665 |
| MS.gene015069.t1 | MTR_4g106750 | 58.667 | 525 | 214 | 1 | 35 | 556 | 8 | 532 | 0.0 | 650 |
| MS.gene015069.t1 | MTR_5g035180 | 57.143 | 525 | 220 | 3 | 36 | 556 | 15 | 538 | 0.0 | 636 |
| MS.gene015069.t1 | MTR_1g106085 | 58.252 | 515 | 209 | 3 | 44 | 555 | 15 | 526 | 0.0 | 615 |
| MS.gene015069.t1 | MTR_4g106750 | 58.299 | 482 | 198 | 1 | 78 | 556 | 2 | 483 | 0.0 | 586 |
| MS.gene015069.t1 | MTR_8g086520 | 53.089 | 518 | 234 | 4 | 42 | 554 | 9 | 522 | 0.0 | 573 |
| MS.gene015069.t1 | MTR_2g016460 | 53.065 | 522 | 238 | 3 | 36 | 554 | 5 | 522 | 0.0 | 571 |
| MS.gene015069.t1 | MTR_3g080390 | 51.451 | 517 | 245 | 3 | 42 | 554 | 4 | 518 | 0.0 | 547 |
| MS.gene015069.t1 | MTR_8g086520 | 54.649 | 441 | 198 | 2 | 42 | 482 | 9 | 447 | 1.60e-178 | 512 |
| MS.gene015069.t1 | MTR_1g021120 | 49.808 | 520 | 251 | 4 | 41 | 555 | 32 | 546 | 5.94e-173 | 501 |
| MS.gene015069.t1 | MTR_8g086520 | 54.847 | 392 | 177 | 0 | 42 | 433 | 9 | 400 | 1.10e-160 | 464 |
| MS.gene015069.t1 | MTR_4g106750 | 58.421 | 380 | 152 | 2 | 183 | 556 | 1 | 380 | 7.34e-159 | 458 |
| MS.gene015069.t1 | MTR_8g086520 | 53.333 | 405 | 180 | 4 | 155 | 554 | 6 | 406 | 8.11e-152 | 441 |
| MS.gene015069.t1 | MTR_2g084895 | 33.589 | 521 | 303 | 6 | 70 | 553 | 164 | 678 | 4.40e-92 | 296 |
| MS.gene015069.t1 | MTR_8g068550 | 33.141 | 519 | 304 | 8 | 71 | 553 | 244 | 755 | 9.53e-91 | 295 |
| MS.gene015069.t1 | MTR_5g032020 | 34.496 | 516 | 295 | 8 | 70 | 549 | 185 | 693 | 4.67e-89 | 289 |
| MS.gene015069.t1 | MTR_2g103510 | 29.371 | 572 | 351 | 11 | 8 | 553 | 47 | 591 | 1.76e-84 | 274 |
| MS.gene015069.t1 | MTR_4g055290 | 32.054 | 521 | 306 | 7 | 70 | 553 | 171 | 680 | 1.16e-82 | 272 |
| MS.gene015069.t1 | MTR_8g086535 | 63.636 | 99 | 36 | 0 | 335 | 433 | 18 | 116 | 3.24e-34 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015069.t1 | AT1G65550 | 62.949 | 529 | 185 | 4 | 36 | 555 | 14 | 540 | 0.0 | 726 |
| MS.gene015069.t1 | AT5G62890 | 59.429 | 525 | 210 | 1 | 35 | 556 | 8 | 532 | 0.0 | 660 |
| MS.gene015069.t1 | AT5G62890 | 59.429 | 525 | 210 | 1 | 35 | 556 | 8 | 532 | 0.0 | 660 |
| MS.gene015069.t1 | AT5G62890 | 59.429 | 525 | 210 | 1 | 35 | 556 | 8 | 532 | 0.0 | 660 |
| MS.gene015069.t1 | AT1G60030 | 59.302 | 516 | 207 | 1 | 44 | 556 | 23 | 538 | 0.0 | 652 |
| MS.gene015069.t1 | AT5G49990 | 58.960 | 519 | 210 | 1 | 41 | 556 | 10 | 528 | 0.0 | 624 |
| MS.gene015069.t1 | AT5G49990 | 58.960 | 519 | 210 | 1 | 41 | 556 | 10 | 528 | 0.0 | 624 |
| MS.gene015069.t1 | AT5G49990 | 58.960 | 519 | 210 | 1 | 41 | 556 | 10 | 528 | 0.0 | 624 |
| MS.gene015069.t1 | AT5G49990 | 58.960 | 519 | 210 | 1 | 41 | 556 | 10 | 528 | 0.0 | 624 |
| MS.gene015069.t1 | AT1G10540 | 55.128 | 546 | 228 | 6 | 18 | 555 | 2 | 538 | 0.0 | 613 |
| MS.gene015069.t1 | AT1G49960 | 57.004 | 514 | 218 | 1 | 45 | 555 | 12 | 525 | 0.0 | 595 |
| MS.gene015069.t1 | AT5G62890 | 61.148 | 453 | 173 | 1 | 35 | 484 | 8 | 460 | 0.0 | 585 |
| MS.gene015069.t1 | AT2G34190 | 52.682 | 522 | 240 | 3 | 36 | 554 | 5 | 522 | 0.0 | 572 |
| MS.gene015069.t1 | AT2G05760 | 49.710 | 517 | 254 | 3 | 42 | 554 | 4 | 518 | 0.0 | 539 |
| MS.gene015069.t1 | AT5G25420 | 54.831 | 445 | 120 | 5 | 36 | 474 | 26 | 395 | 3.71e-167 | 481 |
| MS.gene015069.t1 | AT2G26510 | 47.810 | 525 | 266 | 3 | 35 | 554 | 26 | 547 | 2.94e-166 | 484 |
| MS.gene015069.t1 | AT1G10540 | 55.584 | 394 | 165 | 4 | 18 | 408 | 2 | 388 | 1.88e-153 | 445 |
| MS.gene015069.t1 | AT2G26510 | 49.451 | 364 | 184 | 0 | 45 | 408 | 36 | 399 | 7.47e-117 | 352 |
| MS.gene015069.t1 | AT2G26510 | 48.718 | 351 | 180 | 0 | 45 | 395 | 36 | 386 | 1.59e-109 | 334 |
| MS.gene015069.t1 | AT2G27810 | 30.084 | 595 | 366 | 10 | 1 | 553 | 115 | 701 | 1.29e-79 | 264 |
| MS.gene015069.t1 | AT2G27810 | 28.964 | 618 | 367 | 9 | 1 | 553 | 115 | 725 | 1.62e-77 | 259 |
| MS.gene015069.t1 | AT4G38050 | 31.308 | 543 | 318 | 8 | 53 | 553 | 175 | 704 | 1.96e-76 | 256 |
| MS.gene015069.t1 | AT2G27810 | 31.799 | 478 | 301 | 5 | 1 | 456 | 115 | 589 | 5.49e-71 | 238 |
| MS.gene015069.t1 | AT2G27810 | 31.787 | 431 | 269 | 5 | 1 | 409 | 115 | 542 | 3.41e-61 | 211 |
Find 134 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCTTGGTTGCTTTCATTT+TGG | 0.169248 | 3.2:+85660733 | MS.gene015069:CDS |
| ACATTTCTTCAATCTTTATT+TGG | 0.205778 | 3.2:+85658403 | MS.gene015069:CDS |
| CAGAGTACGTTGTTTGTTTC+CGG | 0.207698 | 3.2:+85658373 | MS.gene015069:CDS |
| TTATGGGATTCTTGGGATTA+TGG | 0.208045 | 3.2:+85658705 | MS.gene015069:CDS |
| TTTCAGAACCAAATTTGTTT+TGG | 0.241303 | 3.2:+85660471 | MS.gene015069:CDS |
| TGAGAAGCCCAAAACAAATT+TGG | 0.250863 | 3.2:-85660479 | None:intergenic |
| GCATTATACTGTGTATTCTT+TGG | 0.261773 | 3.2:+85660293 | MS.gene015069:CDS |
| CCAAATGGTTATGGGATTCT+TGG | 0.270090 | 3.2:+85658697 | MS.gene015069:CDS |
| TCATAAAACCAGCTGATATC+TGG | 0.294816 | 3.2:-85660023 | None:intergenic |
| GGCATGTTTGGTTCTGTAAC+AGG | 0.296118 | 3.2:+85659853 | MS.gene015069:CDS |
| TCTTTGCTCAATGGCATGTT+TGG | 0.302794 | 3.2:+85659841 | MS.gene015069:CDS |
| GTTAGAAGCAATGAATTCTA+TGG | 0.305839 | 3.2:+85660842 | MS.gene015069:CDS |
| GCTTGAACAGCTGACATAAT+TGG | 0.308881 | 3.2:-85658472 | None:intergenic |
| GGAAGTCCTACCTTCAACTA+TGG | 0.318637 | 3.2:+85659500 | MS.gene015069:CDS |
| TGCATGTTTCCAAATGGTTA+TGG | 0.320849 | 3.2:+85658688 | MS.gene015069:CDS |
| AACTATTGAGATTACAGAAT+TGG | 0.325604 | 3.2:-85660450 | None:intergenic |
| AACTATAGTTGTTCCTCAAA+TGG | 0.329633 | 3.2:+85658211 | MS.gene015069:CDS |
| GCTTCCAGCACTACTTGTTA+TGG | 0.334174 | 3.2:+85659004 | MS.gene015069:CDS |
| CAGGGAAAACGCTGGACTAT+TGG | 0.360278 | 3.2:+85659969 | MS.gene015069:intron |
| TATGCAGCTTCTGCAGGTCT+TGG | 0.365022 | 3.2:+85660421 | MS.gene015069:intron |
| GCATGTTTCCAAATGGTTAT+GGG | 0.366673 | 3.2:+85658689 | MS.gene015069:CDS |
| GGACTTGGTCTCTATCATCT+TGG | 0.375669 | 3.2:+85658785 | MS.gene015069:CDS |
| CAAATGGTTATGGGATTCTT+GGG | 0.379964 | 3.2:+85658698 | MS.gene015069:CDS |
| TGGGAGAAGTTCAGTATCTA+TGG | 0.388930 | 3.2:+85660812 | MS.gene015069:CDS |
| CCAGGTAATTGCTCTTTAGC+TGG | 0.392454 | 3.2:-85657892 | None:intergenic |
| TCTGTTATCAGCCGCGGAAC+TGG | 0.392882 | 3.2:+85659711 | MS.gene015069:CDS |
| TCTTTAGCTGGGTGTGCTAC+TGG | 0.394583 | 3.2:-85657880 | None:intergenic |
| TTCCATACCTTTGCCAATCA+TGG | 0.396450 | 3.2:+85660268 | MS.gene015069:CDS |
| AGGAACATGCAGGTCCTAGA+TGG | 0.397588 | 3.2:+85660557 | MS.gene015069:CDS |
| CGCCAAAGAGACTGGTTAAA+GGG | 0.402830 | 3.2:-85660897 | None:intergenic |
| ACACACAATGGTGGCTGCCT+TGG | 0.409130 | 3.2:+85660718 | MS.gene015069:CDS |
| CAGTATAATGCTGCCATGAT+TGG | 0.416838 | 3.2:-85660281 | None:intergenic |
| GAGATTCACTCAGACAATTA+CGG | 0.420412 | 3.2:+85658640 | MS.gene015069:intron |
| CAGCATTACATTCTGACTCT+TGG | 0.422869 | 3.2:+85658170 | MS.gene015069:CDS |
| CTGATATCTGGATGACTCTT+CGG | 0.422907 | 3.2:-85660011 | None:intergenic |
| CCAAGAATCCCATAACCATT+TGG | 0.423135 | 3.2:-85658697 | None:intergenic |
| CGATTGCCAACTGTAGTTGT+TGG | 0.425209 | 3.2:+85658430 | MS.gene015069:CDS |
| CAACAACTACAGTTGGCAAT+CGG | 0.429632 | 3.2:-85658429 | None:intergenic |
| GTCCCTTATGTAACATTCAC+TGG | 0.434961 | 3.2:+85658764 | MS.gene015069:CDS |
| TGAATATTATCAAGTAAAAC+AGG | 0.437037 | 3.2:+85660537 | MS.gene015069:CDS |
| AGATTCACTCAGACAATTAC+GGG | 0.439047 | 3.2:+85658641 | MS.gene015069:CDS |
| ATTTGAGGAACAACTATAGT+TGG | 0.440677 | 3.2:-85658209 | None:intergenic |
| AAGTACACATCGACCTCATA+AGG | 0.441893 | 3.2:-85658520 | None:intergenic |
| CACGGGCTGCATCATCTTCA+CGG | 0.441998 | 3.2:-85660769 | None:intergenic |
| AAAAGTTTCCCCATAGTTGA+AGG | 0.447309 | 3.2:-85659510 | None:intergenic |
| TTGGGCTTCTCATTCTTCCT+CGG | 0.448057 | 3.2:+85660490 | MS.gene015069:CDS |
| GGAGTAGCTTCTTTGCTCAA+TGG | 0.454916 | 3.2:+85659832 | MS.gene015069:CDS |
| CATATTTGCATGTAGTCTAC+TGG | 0.455099 | 3.2:+85659639 | MS.gene015069:intron |
| GAAACATGCACTTATAATCA+AGG | 0.460770 | 3.2:-85658675 | None:intergenic |
| ACATTGTTTCCACCCATTTG+AGG | 0.466873 | 3.2:-85658224 | None:intergenic |
| TCAGATAATCTCACCCATCT+AGG | 0.467136 | 3.2:-85660571 | None:intergenic |
| CTTCCCCATTGAAAAGGATA+AGG | 0.469030 | 3.2:-85659482 | None:intergenic |
| ACTATAGTTGTTCCTCAAAT+GGG | 0.470243 | 3.2:+85658212 | MS.gene015069:CDS |
| GTCTTATTAGTTCTGCTCCA+TGG | 0.472828 | 3.2:+85659289 | MS.gene015069:CDS |
| AGTCCAGTGAATGTTACATA+AGG | 0.473008 | 3.2:-85658767 | None:intergenic |
| TTATCAGCCGCGGAACTGGC+TGG | 0.474227 | 3.2:+85659715 | MS.gene015069:CDS |
| CTGGCAACATGTGTTGAAGT+TGG | 0.474802 | 3.2:+85658981 | MS.gene015069:CDS |
| GGAAATAATGCTGGCGGTGG+CGG | 0.475933 | 3.2:+85657793 | MS.gene015069:CDS |
| AATGCTGGCGGTGGCGGTGA+TGG | 0.476328 | 3.2:+85657799 | MS.gene015069:CDS |
| AAAGAGACTGGTTAAAGGGC+TGG | 0.481224 | 3.2:-85660893 | None:intergenic |
| TATAAGTGCATGTTTCCAAA+TGG | 0.482279 | 3.2:+85658682 | MS.gene015069:CDS |
| TTGGGATATGCAGCTTCTGC+AGG | 0.486729 | 3.2:+85660415 | MS.gene015069:intron |
| CAGCCGCGGAACTGGCTGGC+TGG | 0.489535 | 3.2:+85659719 | MS.gene015069:CDS |
| TTGAAGAAATGTGCTTAGTC+CGG | 0.498808 | 3.2:-85658392 | None:intergenic |
| CAACATATGGCTCAAAATGA+AGG | 0.499264 | 3.2:+85657754 | None:intergenic |
| GAAGGTGGAGATGGTGGGAA+TGG | 0.499508 | 3.2:+85657772 | MS.gene015069:CDS |
| AACAACTACAGTTGGCAATC+GGG | 0.501292 | 3.2:-85658428 | None:intergenic |
| GAAGTCCTACCTTCAACTAT+GGG | 0.504820 | 3.2:+85659501 | MS.gene015069:CDS |
| TGGCAACATGTGTTGAAGTT+GGG | 0.508157 | 3.2:+85658982 | MS.gene015069:CDS |
| GTAGGACTTCCCCATTGAAA+AGG | 0.513415 | 3.2:-85659488 | None:intergenic |
| CAGACAATTACGGGAATACA+AGG | 0.519299 | 3.2:+85658650 | MS.gene015069:CDS |
| AAAACCATAACAAGTAGTGC+TGG | 0.520610 | 3.2:-85659008 | None:intergenic |
| TGGAAAACAAAACTGCAAAT+CGG | 0.523327 | 3.2:-85659167 | None:intergenic |
| GTCCAGTGAATGTTACATAA+GGG | 0.527838 | 3.2:-85658766 | None:intergenic |
| GCTGGCGGTGGCGGTGATGG+CGG | 0.532310 | 3.2:+85657802 | MS.gene015069:CDS |
| CAAAATGAAGGTGGAGATGG+TGG | 0.533623 | 3.2:+85657766 | MS.gene015069:CDS |
| CAGGTAATTGCTCTTTAGCT+GGG | 0.537966 | 3.2:-85657891 | None:intergenic |
| TATGTAACATTCACTGGACT+TGG | 0.538442 | 3.2:+85658770 | MS.gene015069:CDS |
| ACTGCAAATCGGTCAAATGT+AGG | 0.543952 | 3.2:-85659156 | None:intergenic |
| GATTATGGAGAAATGCTGTC+AGG | 0.547810 | 3.2:+85658720 | MS.gene015069:CDS |
| TGTTTCAACTCAGTTGGAGA+AGG | 0.550204 | 3.2:+85658339 | MS.gene015069:intron |
| ATTTCAATCCACTGTCATCA+CGG | 0.551720 | 3.2:-85660787 | None:intergenic |
| GGTGGGAATGGAAATAATGC+TGG | 0.552918 | 3.2:+85657784 | MS.gene015069:CDS |
| CTGATAACAGAAGGTGGCAC+GGG | 0.553647 | 3.2:-85659699 | None:intergenic |
| AAATACTAACGCCAAGGTGG+AGG | 0.555562 | 3.2:-85657937 | None:intergenic |
| AGAGTCATCCAGATATCAGC+TGG | 0.558329 | 3.2:+85660015 | MS.gene015069:CDS |
| GTTTCCCCATAGTTGAAGGT+AGG | 0.565886 | 3.2:-85659506 | None:intergenic |
| GGAACATGCAGGTCCTAGAT+GGG | 0.568067 | 3.2:+85660558 | MS.gene015069:CDS |
| AGTTGCCGCACTGACCGTGC+TGG | 0.569095 | 3.2:+85659267 | MS.gene015069:CDS |
| AACTCAGTTGGAGAAGGCCA+AGG | 0.569555 | 3.2:+85658345 | MS.gene015069:intron |
| TTTCAATCCACTGTCATCAC+GGG | 0.569622 | 3.2:-85660786 | None:intergenic |
| GGACAACACAAAGTGGGCTA+AGG | 0.572132 | 3.2:-85658745 | None:intergenic |
| ACGGGCTGCATCATCTTCAC+GGG | 0.573702 | 3.2:-85660768 | None:intergenic |
| TGCCATGATTGGCAAAGGTA+TGG | 0.573927 | 3.2:-85660270 | None:intergenic |
| CAAGTAAAACAGGAACATGC+AGG | 0.574966 | 3.2:+85660547 | MS.gene015069:CDS |
| TTCATATACAGATCCTTATG+AGG | 0.584344 | 3.2:+85658507 | MS.gene015069:CDS |
| CTATTGGCATTGACAAGAGT+GGG | 0.584625 | 3.2:+85659985 | MS.gene015069:CDS |
| CAAGAGTCAGAATGTAATGC+TGG | 0.586166 | 3.2:-85658169 | None:intergenic |
| CCAGCTAAAGAGCAATTACC+TGG | 0.592250 | 3.2:+85657892 | MS.gene015069:CDS |
| ATAGTTGTTCCTCAAATGGG+TGG | 0.593855 | 3.2:+85658215 | MS.gene015069:CDS |
| ACTATTGGCATTGACAAGAG+TGG | 0.602157 | 3.2:+85659984 | MS.gene015069:CDS |
| AATGGAAATAATGCTGGCGG+TGG | 0.605700 | 3.2:+85657790 | MS.gene015069:CDS |
| GCTCAAAATGAAGGTGGAGA+TGG | 0.606475 | 3.2:+85657763 | MS.gene015069:CDS |
| AAATAACCATGCACTTGCAA+TGG | 0.607464 | 3.2:-85659187 | None:intergenic |
| CAACGTACTCTGAATCACCT+TGG | 0.609774 | 3.2:-85658362 | None:intergenic |
| GCTGATAACAGAAGGTGGCA+CGG | 0.610840 | 3.2:-85659700 | None:intergenic |
| ATGACAGTGGATTGAAATGG+TGG | 0.613573 | 3.2:+85660792 | MS.gene015069:CDS |
| CATATTCGCTTCACACACAA+TGG | 0.614250 | 3.2:+85660706 | MS.gene015069:CDS |
| AATGCTGCCATGATTGGCAA+AGG | 0.615074 | 3.2:-85660275 | None:intergenic |
| GCATAAATAGTCCTCCACCT+TGG | 0.616612 | 3.2:+85657926 | MS.gene015069:CDS |
| TAATATTCAGTGAAATATTG+CGG | 0.617054 | 3.2:-85660523 | None:intergenic |
| CCACCTTCTGTTATCAGCCG+CGG | 0.618128 | 3.2:+85659705 | MS.gene015069:CDS |
| TATGAACCAACAACTACAGT+TGG | 0.620524 | 3.2:-85658436 | None:intergenic |
| ACATAAGGGACAACACAAAG+TGG | 0.621509 | 3.2:-85658752 | None:intergenic |
| CTATCATCTTGGTTTCCCTG+TGG | 0.623629 | 3.2:+85658796 | MS.gene015069:CDS |
| GTGATGACAGTGGATTGAAA+TGG | 0.630250 | 3.2:+85660789 | MS.gene015069:CDS |
| TTTATGCAATATTGAACACC+AGG | 0.630678 | 3.2:-85657910 | None:intergenic |
| ATCCAAAATGAAAGCAACCA+AGG | 0.632215 | 3.2:-85660735 | None:intergenic |
| GTTCCGCGGCTGATAACAGA+AGG | 0.632250 | 3.2:-85659708 | None:intergenic |
| CATATGGCTCAAAATGAAGG+TGG | 0.633129 | 3.2:+85657757 | None:intergenic |
| TGAAAATACTAACGCCAAGG+TGG | 0.634498 | 3.2:-85657940 | None:intergenic |
| CATAAGGGACAACACAAAGT+GGG | 0.647050 | 3.2:-85658751 | None:intergenic |
| TTACCAGCCAGCCAGTTCCG+CGG | 0.648530 | 3.2:-85659722 | None:intergenic |
| TGACAGTGGATTGAAATGGT+GGG | 0.657332 | 3.2:+85660793 | MS.gene015069:CDS |
| CCGCGGCTGATAACAGAAGG+TGG | 0.657716 | 3.2:-85659705 | None:intergenic |
| GCTTATTTCAGGGAAAACGC+TGG | 0.661694 | 3.2:+85659961 | MS.gene015069:intron |
| ATTCGCTTCACACACAATGG+TGG | 0.666772 | 3.2:+85660709 | MS.gene015069:CDS |
| AAAATGAAGGTGGAGATGGT+GGG | 0.674832 | 3.2:+85657767 | MS.gene015069:CDS |
| GATGCAGCCCGTGATGACAG+TGG | 0.686042 | 3.2:+85660779 | MS.gene015069:CDS |
| AAGTCCTACCTTCAACTATG+GGG | 0.694616 | 3.2:+85659502 | MS.gene015069:CDS |
| TAAGACCAGCACGGTCAGTG+CGG | 0.712401 | 3.2:-85659272 | None:intergenic |
| GGGAATGGAAATAATGCTGG+CGG | 0.720922 | 3.2:+85657787 | MS.gene015069:CDS |
| CAGAACTAATAAGACCAGCA+CGG | 0.727218 | 3.2:-85659281 | None:intergenic |
| ATTGCGGTATTGAGACACCG+AGG | 0.806570 | 3.2:-85660507 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCAAATTAAAAAAGTTG+AGG | - | chr3.2:85658111-85658130 | None:intergenic | 15.0% |
| !! | AATCAAAACAAAAAATATTG+TGG | - | chr3.2:85659600-85659619 | None:intergenic | 15.0% |
| !! | AGAATAACAACATTAAAAAT+AGG | - | chr3.2:85660185-85660204 | None:intergenic | 15.0% |
| !! | TTTGTATTATAAGCTATAAA+CGG | + | chr3.2:85659380-85659399 | MS.gene015069:intron | 15.0% |
| !!! | GATTTATTTTTCTTAAATTC+TGG | + | chr3.2:85659066-85659085 | MS.gene015069:intron | 15.0% |
| !! | AATCAGCATTAAAATAAACA+TGG | - | chr3.2:85658594-85658613 | None:intergenic | 20.0% |
| !! | ACAGTGATTGAAAAAATTAA+AGG | - | chr3.2:85658956-85658975 | None:intergenic | 20.0% |
| !! | ACATTTCTTCAATCTTTATT+TGG | + | chr3.2:85658403-85658422 | MS.gene015069:CDS | 20.0% |
| !! | AGTGATTGAAAAAATTAAAG+GGG | - | chr3.2:85658954-85658973 | None:intergenic | 20.0% |
| !! | CAGTGATTGAAAAAATTAAA+GGG | - | chr3.2:85658955-85658974 | None:intergenic | 20.0% |
| !! | TAATATTCAGTGAAATATTG+CGG | - | chr3.2:85660526-85660545 | None:intergenic | 20.0% |
| !! | TACAAAATTCGATTCAAAAA+AGG | - | chr3.2:85659366-85659385 | None:intergenic | 20.0% |
| !! | TGAAAATGCATTGAAAAATT+AGG | - | chr3.2:85660665-85660684 | None:intergenic | 20.0% |
| !! | TGAATATTATCAAGTAAAAC+AGG | + | chr3.2:85660537-85660556 | MS.gene015069:CDS | 20.0% |
| !!! | ATGATTTTCTTTTCTGTATT+TGG | + | chr3.2:85660042-85660061 | MS.gene015069:CDS | 20.0% |
| !!! | CATTATCTTTGTAAGATTTT+TGG | + | chr3.2:85660341-85660360 | MS.gene015069:intron | 20.0% |
| !!! | TATGTTTGTTTGTTTGTTTT+TGG | + | chr3.2:85658051-85658070 | MS.gene015069:intron | 20.0% |
| ! | AACTATTGAGATTACAGAAT+TGG | - | chr3.2:85660453-85660472 | None:intergenic | 25.0% |
| ! | AATTCAGCTTCTATAAGTTA+AGG | + | chr3.2:85658892-85658911 | MS.gene015069:intron | 25.0% |
| ! | ACTTATGATTGAATTTCATG+TGG | + | chr3.2:85659789-85659808 | MS.gene015069:intron | 25.0% |
| ! | ATTGATTGCGTTATTTATAC+AGG | + | chr3.2:85659450-85659469 | MS.gene015069:intron | 25.0% |
| ! | CTACACTTTGTAATTATTTC+TGG | + | chr3.2:85659751-85659770 | MS.gene015069:intron | 25.0% |
| ! | TGAAATCATTTCACATTTGT+CGG | - | chr3.2:85658019-85658038 | None:intergenic | 25.0% |
| ! | TGACAAGATTTATGTAACTT+GGG | + | chr3.2:85660397-85660416 | MS.gene015069:intron | 25.0% |
| ! | TTCAGATTTGACATTTCTAA+AGG | + | chr3.2:85660152-85660171 | MS.gene015069:intron | 25.0% |
| ! | TTGACAAGATTTATGTAACT+TGG | + | chr3.2:85660396-85660415 | MS.gene015069:intron | 25.0% |
| ! | TTGATTGCGTTATTTATACA+GGG | + | chr3.2:85659451-85659470 | MS.gene015069:intron | 25.0% |
| !! | ATCACGAAATTTTCAACAAT+TGG | - | chr3.2:85660604-85660623 | None:intergenic | 25.0% |
| !! | ATTTTCCTTATCCTTTTCAA+TGG | + | chr3.2:85659477-85659496 | MS.gene015069:CDS | 25.0% |
| !! | TTTTATGACAAAGAGATATG+AGG | - | chr3.2:85659903-85659922 | None:intergenic | 25.0% |
| !! | TTTTCCTTATCCTTTTCAAT+GGG | + | chr3.2:85659478-85659497 | MS.gene015069:CDS | 25.0% |
| !! | TTTTCTGTATTTGGTATGAT+AGG | + | chr3.2:85660051-85660070 | MS.gene015069:intron | 25.0% |
| !!! | ATGCTGATTTGATTCATATA+TGG | + | chr3.2:85658605-85658624 | MS.gene015069:intron | 25.0% |
| !!! | TCTTTGTAAGATTTTTGGTT+AGG | + | chr3.2:85660346-85660365 | MS.gene015069:intron | 25.0% |
| !!! | TGCTGATTTGATTCATATAT+GGG | + | chr3.2:85658606-85658625 | MS.gene015069:intron | 25.0% |
| !!! | TGTAATTATTTCTGGAATCA+TGG | + | chr3.2:85659759-85659778 | MS.gene015069:intron | 25.0% |
| !!! | TTCAGAACCAAATTTGTTTT+GGG | + | chr3.2:85660472-85660491 | MS.gene015069:CDS | 25.0% |
| !!! | TTCTTTTGTTTCTCTTTTTG+AGG | + | chr3.2:85659547-85659566 | MS.gene015069:CDS | 25.0% |
| !!! | TTTCAGAACCAAATTTGTTT+TGG | + | chr3.2:85660471-85660490 | MS.gene015069:CDS | 25.0% |
| AACTATAGTTGTTCCTCAAA+TGG | + | chr3.2:85658211-85658230 | MS.gene015069:CDS | 30.0% | |
| AAGTAGGAATTTATACCACA+GGG | - | chr3.2:85658814-85658833 | None:intergenic | 30.0% | |
| ACTATAGTTGTTCCTCAAAT+GGG | + | chr3.2:85658212-85658231 | MS.gene015069:CDS | 30.0% | |
| ATATTGTGGAGATTCTATCA+AGG | - | chr3.2:85659586-85659605 | None:intergenic | 30.0% | |
| ATTTGAGGAACAACTATAGT+TGG | - | chr3.2:85658212-85658231 | None:intergenic | 30.0% | |
| GAAACATGCACTTATAATCA+AGG | - | chr3.2:85658678-85658697 | None:intergenic | 30.0% | |
| GCATAATGCAGAAAATGAAT+AGG | - | chr3.2:85659936-85659955 | None:intergenic | 30.0% | |
| GCATTATACTGTGTATTCTT+TGG | + | chr3.2:85660293-85660312 | MS.gene015069:CDS | 30.0% | |
| GTTAGAAGCAATGAATTCTA+TGG | + | chr3.2:85660842-85660861 | MS.gene015069:CDS | 30.0% | |
| TAAGTAGGAATTTATACCAC+AGG | - | chr3.2:85658815-85658834 | None:intergenic | 30.0% | |
| TATAAGTGCATGTTTCCAAA+TGG | + | chr3.2:85658682-85658701 | MS.gene015069:CDS | 30.0% | |
| TATTGTGGAGATTCTATCAA+GGG | - | chr3.2:85659585-85659604 | None:intergenic | 30.0% | |
| TGGAAAACAAAACTGCAAAT+CGG | - | chr3.2:85659170-85659189 | None:intergenic | 30.0% | |
| TTAAGGACTTGAGGATATAT+AGG | + | chr3.2:85658909-85658928 | MS.gene015069:intron | 30.0% | |
| TTCATATACAGATCCTTATG+AGG | + | chr3.2:85658507-85658526 | MS.gene015069:CDS | 30.0% | |
| TTCTATAAGTTAAGGACTTG+AGG | + | chr3.2:85658900-85658919 | MS.gene015069:intron | 30.0% | |
| TTTATGCAATATTGAACACC+AGG | - | chr3.2:85657913-85657932 | None:intergenic | 30.0% | |
| ! | AAAAATGCTCCAAATTTTCC+TGG | - | chr3.2:85660245-85660264 | None:intergenic | 30.0% |
| ! | AATCTTTGTTTCAACTCAGT+TGG | + | chr3.2:85658333-85658352 | MS.gene015069:intron | 30.0% |
| ! | CAAATTTTCCTGGTTGAAAA+GGG | - | chr3.2:85660235-85660254 | None:intergenic | 30.0% |
| ! | TATGCAGCTTTTCATTCAAA+GGG | + | chr3.2:85658833-85658852 | MS.gene015069:intron | 30.0% |
| ! | TTATGCAGCTTTTCATTCAA+AGG | + | chr3.2:85658832-85658851 | MS.gene015069:intron | 30.0% |
| ! | TTTCCTTATCCTTTTCAATG+GGG | + | chr3.2:85659479-85659498 | MS.gene015069:CDS | 30.0% |
| !!! | TTGTTCTTGTTTTGCATCTT+TGG | - | chr3.2:85657857-85657876 | None:intergenic | 30.0% |
| AAAACCATAACAAGTAGTGC+TGG | - | chr3.2:85659011-85659030 | None:intergenic | 35.0% | |
| AAAAGTTTCCCCATAGTTGA+AGG | - | chr3.2:85659513-85659532 | None:intergenic | 35.0% | |
| AAATAACCATGCACTTGCAA+TGG | - | chr3.2:85659190-85659209 | None:intergenic | 35.0% | |
| AGATTCACTCAGACAATTAC+GGG | + | chr3.2:85658641-85658660 | MS.gene015069:CDS | 35.0% | |
| AGCAACACCAACAACAAAAA+TGG | - | chr3.2:85658560-85658579 | None:intergenic | 35.0% | |
| AGTCCAGTGAATGTTACATA+AGG | - | chr3.2:85658770-85658789 | None:intergenic | 35.0% | |
| ATCCAAAATGAAAGCAACCA+AGG | - | chr3.2:85660738-85660757 | None:intergenic | 35.0% | |
| ATTTCAATCCACTGTCATCA+CGG | - | chr3.2:85660790-85660809 | None:intergenic | 35.0% | |
| CAAATGGTTATGGGATTCTT+GGG | + | chr3.2:85658698-85658717 | MS.gene015069:CDS | 35.0% | |
| CATATTTGCATGTAGTCTAC+TGG | + | chr3.2:85659639-85659658 | MS.gene015069:intron | 35.0% | |
| GAATGAAAAGCTGCATAAGT+AGG | - | chr3.2:85658830-85658849 | None:intergenic | 35.0% | |
| GAATGAAAATACTAACGCCA+AGG | - | chr3.2:85657946-85657965 | None:intergenic | 35.0% | |
| GAGATTCACTCAGACAATTA+CGG | + | chr3.2:85658640-85658659 | MS.gene015069:intron | 35.0% | |
| GCACTCTCATTGTTATCTTA+GGG | + | chr3.2:85659811-85659830 | MS.gene015069:intron | 35.0% | |
| GCATGTTTCCAAATGGTTAT+GGG | + | chr3.2:85658689-85658708 | MS.gene015069:CDS | 35.0% | |
| GTCCAGTGAATGTTACATAA+GGG | - | chr3.2:85658769-85658788 | None:intergenic | 35.0% | |
| TATGAACCAACAACTACAGT+TGG | - | chr3.2:85658439-85658458 | None:intergenic | 35.0% | |
| TATGTAACATTCACTGGACT+TGG | + | chr3.2:85658770-85658789 | MS.gene015069:CDS | 35.0% | |
| TCATAAAACCAGCTGATATC+TGG | - | chr3.2:85660026-85660045 | None:intergenic | 35.0% | |
| TGAGAAGCCCAAAACAAATT+TGG | - | chr3.2:85660482-85660501 | None:intergenic | 35.0% | |
| TGCATGTTTCCAAATGGTTA+TGG | + | chr3.2:85658688-85658707 | MS.gene015069:CDS | 35.0% | |
| TTATGGGATTCTTGGGATTA+TGG | + | chr3.2:85658705-85658724 | MS.gene015069:CDS | 35.0% | |
| TTGAAGAAATGTGCTTAGTC+CGG | - | chr3.2:85658395-85658414 | None:intergenic | 35.0% | |
| ! | CAACTATTTTGTGTGCTTTC+TGG | - | chr3.2:85659252-85659271 | None:intergenic | 35.0% |
| ! | CCAAATTTTCCTGGTTGAAA+AGG | - | chr3.2:85660236-85660255 | None:intergenic | 35.0% |
| ! | CCTTTTCAACCAGGAAAATT+TGG | + | chr3.2:85660233-85660252 | MS.gene015069:intron | 35.0% |
| ! | TACTGGTACATTTTATGCTG+CGG | + | chr3.2:85659656-85659675 | MS.gene015069:CDS | 35.0% |
| ! | TGTTATGGTTTTCATCTCTC+AGG | + | chr3.2:85659019-85659038 | MS.gene015069:CDS | 35.0% |
| !! | TCATGCTCCATTTTTGTTGT+TGG | + | chr3.2:85658550-85658569 | MS.gene015069:intron | 35.0% |
| !!! | CTCTTTTTGAGGTAAGCAAT+AGG | + | chr3.2:85659558-85659577 | MS.gene015069:intron | 35.0% |
| AAAAACTCGTTGAGTCTGCA+TGG | - | chr3.2:85660872-85660891 | None:intergenic | 40.0% | |
| AAAATGAAGGTGGAGATGGT+GGG | + | chr3.2:85657767-85657786 | MS.gene015069:CDS | 40.0% | |
| AACAACTACAGTTGGCAATC+GGG | - | chr3.2:85658431-85658450 | None:intergenic | 40.0% | |
| AAGTACACATCGACCTCATA+AGG | - | chr3.2:85658523-85658542 | None:intergenic | 40.0% | |
| AAGTCCTACCTTCAACTATG+GGG | + | chr3.2:85659502-85659521 | MS.gene015069:CDS | 40.0% | |
| ACATAAGGGACAACACAAAG+TGG | - | chr3.2:85658755-85658774 | None:intergenic | 40.0% | |
| ACATTGTTTCCACCCATTTG+AGG | - | chr3.2:85658227-85658246 | None:intergenic | 40.0% | |
| ACTGCAAATCGGTCAAATGT+AGG | - | chr3.2:85659159-85659178 | None:intergenic | 40.0% | |
| ATAGTTGTTCCTCAAATGGG+TGG | + | chr3.2:85658215-85658234 | MS.gene015069:CDS | 40.0% | |
| CAACAACTACAGTTGGCAAT+CGG | - | chr3.2:85658432-85658451 | None:intergenic | 40.0% | |
| CAAGAGTCAGAATGTAATGC+TGG | - | chr3.2:85658172-85658191 | None:intergenic | 40.0% | |
| CAAGTAAAACAGGAACATGC+AGG | + | chr3.2:85660547-85660566 | MS.gene015069:CDS | 40.0% | |
| CAGAACTAATAAGACCAGCA+CGG | - | chr3.2:85659284-85659303 | None:intergenic | 40.0% | |
| CAGACAATTACGGGAATACA+AGG | + | chr3.2:85658650-85658669 | MS.gene015069:CDS | 40.0% | |
| CAGAGTACGTTGTTTGTTTC+CGG | + | chr3.2:85658373-85658392 | MS.gene015069:CDS | 40.0% | |
| CAGCATTACATTCTGACTCT+TGG | + | chr3.2:85658170-85658189 | MS.gene015069:CDS | 40.0% | |
| CAGGTAATTGCTCTTTAGCT+GGG | - | chr3.2:85657894-85657913 | None:intergenic | 40.0% | |
| CAGTATAATGCTGCCATGAT+TGG | - | chr3.2:85660284-85660303 | None:intergenic | 40.0% | |
| CATAAGGGACAACACAAAGT+GGG | - | chr3.2:85658754-85658773 | None:intergenic | 40.0% | |
| CATATTCGCTTCACACACAA+TGG | + | chr3.2:85660706-85660725 | MS.gene015069:CDS | 40.0% | |
| CCAAATGGTTATGGGATTCT+TGG | + | chr3.2:85658697-85658716 | MS.gene015069:CDS | 40.0% | |
| CCAAGAATCCCATAACCATT+TGG | - | chr3.2:85658700-85658719 | None:intergenic | 40.0% | |
| CTGATATCTGGATGACTCTT+CGG | - | chr3.2:85660014-85660033 | None:intergenic | 40.0% | |
| CTTCCCCATTGAAAAGGATA+AGG | - | chr3.2:85659485-85659504 | None:intergenic | 40.0% | |
| GAAGTCCTACCTTCAACTAT+GGG | + | chr3.2:85659501-85659520 | MS.gene015069:CDS | 40.0% | |
| GATTATGGAGAAATGCTGTC+AGG | + | chr3.2:85658720-85658739 | MS.gene015069:CDS | 40.0% | |
| GCTTGAACAGCTGACATAAT+TGG | - | chr3.2:85658475-85658494 | None:intergenic | 40.0% | |
| GGCACTCTCATTGTTATCTT+AGG | + | chr3.2:85659810-85659829 | MS.gene015069:intron | 40.0% | |
| GTCCCTTATGTAACATTCAC+TGG | + | chr3.2:85658764-85658783 | MS.gene015069:CDS | 40.0% | |
| TATGCACTGCGCTTATTTCA+GGG | + | chr3.2:85659951-85659970 | MS.gene015069:intron | 40.0% | |
| TCAGATAATCTCACCCATCT+AGG | - | chr3.2:85660574-85660593 | None:intergenic | 40.0% | |
| TCTTTGCTCAATGGCATGTT+TGG | + | chr3.2:85659841-85659860 | MS.gene015069:CDS | 40.0% | |
| TGAAAATACTAACGCCAAGG+TGG | - | chr3.2:85657943-85657962 | None:intergenic | 40.0% | |
| TGGCAACATGTGTTGAAGTT+GGG | + | chr3.2:85658982-85659001 | MS.gene015069:CDS | 40.0% | |
| TGGGAGAAGTTCAGTATCTA+TGG | + | chr3.2:85660812-85660831 | MS.gene015069:CDS | 40.0% | |
| TGTTTCAACTCAGTTGGAGA+AGG | + | chr3.2:85658339-85658358 | MS.gene015069:intron | 40.0% | |
| TTATGCACTGCGCTTATTTC+AGG | + | chr3.2:85659950-85659969 | MS.gene015069:intron | 40.0% | |
| TTCCATACCTTTGCCAATCA+TGG | + | chr3.2:85660268-85660287 | MS.gene015069:CDS | 40.0% | |
| TTTCAATCCACTGTCATCAC+GGG | - | chr3.2:85660789-85660808 | None:intergenic | 40.0% | |
| ! | TCACATTTCCCTTTTCAACC+AGG | + | chr3.2:85660224-85660243 | MS.gene015069:intron | 40.0% |
| ! | TGTTTTCCATTGCAAGTGCA+TGG | + | chr3.2:85659181-85659200 | MS.gene015069:CDS | 40.0% |
| ! | TTTTATGCTGCGGCTAGATA+TGG | + | chr3.2:85659666-85659685 | MS.gene015069:CDS | 40.0% |
| ! | TTTTCAATCACTGTTGCAGC+TGG | + | chr3.2:85658962-85658981 | MS.gene015069:intron | 40.0% |
| !! | ACTATTGGCATTGACAAGAG+TGG | + | chr3.2:85659984-85660003 | MS.gene015069:CDS | 40.0% |
| !! | ATGACAGTGGATTGAAATGG+TGG | + | chr3.2:85660792-85660811 | MS.gene015069:CDS | 40.0% |
| !! | CAGCTGAAGCACTTTTATTG+GGG | + | chr3.2:85658144-85658163 | MS.gene015069:intron | 40.0% |
| !! | CTATTGGCATTGACAAGAGT+GGG | + | chr3.2:85659985-85660004 | MS.gene015069:CDS | 40.0% |
| !! | GCAGCTGAAGCACTTTTATT+GGG | + | chr3.2:85658143-85658162 | MS.gene015069:intron | 40.0% |
| !! | GTCTTATTAGTTCTGCTCCA+TGG | + | chr3.2:85659289-85659308 | MS.gene015069:CDS | 40.0% |
| !! | GTGATGACAGTGGATTGAAA+TGG | + | chr3.2:85660789-85660808 | MS.gene015069:CDS | 40.0% |
| !! | TGACAGTGGATTGAAATGGT+GGG | + | chr3.2:85660793-85660812 | MS.gene015069:CDS | 40.0% |
| !! | TGCAGCTGAAGCACTTTTAT+TGG | + | chr3.2:85658142-85658161 | MS.gene015069:intron | 40.0% |
| !! | TGCCTTGGTTGCTTTCATTT+TGG | + | chr3.2:85660733-85660752 | MS.gene015069:CDS | 40.0% |
| AAATACTAACGCCAAGGTGG+AGG | - | chr3.2:85657940-85657959 | None:intergenic | 45.0% | |
| AATGCTGCCATGATTGGCAA+AGG | - | chr3.2:85660278-85660297 | None:intergenic | 45.0% | |
| AATGGAAATAATGCTGGCGG+TGG | + | chr3.2:85657790-85657809 | MS.gene015069:CDS | 45.0% | |
| AGAGTCATCCAGATATCAGC+TGG | + | chr3.2:85660015-85660034 | MS.gene015069:CDS | 45.0% | |
| ATTCGCTTCACACACAATGG+TGG | + | chr3.2:85660709-85660728 | MS.gene015069:CDS | 45.0% | |
| CAAAATGAAGGTGGAGATGG+TGG | + | chr3.2:85657766-85657785 | MS.gene015069:CDS | 45.0% | |
| CAACGTACTCTGAATCACCT+TGG | - | chr3.2:85658365-85658384 | None:intergenic | 45.0% | |
| CCAGCTAAAGAGCAATTACC+TGG | + | chr3.2:85657892-85657911 | MS.gene015069:CDS | 45.0% | |
| CCAGGTAATTGCTCTTTAGC+TGG | - | chr3.2:85657895-85657914 | None:intergenic | 45.0% | |
| CGATTGCCAACTGTAGTTGT+TGG | + | chr3.2:85658430-85658449 | MS.gene015069:CDS | 45.0% | |
| CTATCATCTTGGTTTCCCTG+TGG | + | chr3.2:85658796-85658815 | MS.gene015069:CDS | 45.0% | |
| CTGCTCCATGGTAAGATTGT+CGG | + | chr3.2:85659301-85659320 | MS.gene015069:intron | 45.0% | |
| CTGGCAACATGTGTTGAAGT+TGG | + | chr3.2:85658981-85659000 | MS.gene015069:CDS | 45.0% | |
| GCATAAATAGTCCTCCACCT+TGG | + | chr3.2:85657926-85657945 | MS.gene015069:CDS | 45.0% | |
| GCTCAAAATGAAGGTGGAGA+TGG | + | chr3.2:85657763-85657782 | MS.gene015069:CDS | 45.0% | |
| GCTTATTTCAGGGAAAACGC+TGG | + | chr3.2:85659961-85659980 | MS.gene015069:intron | 45.0% | |
| GGAAGTCCTACCTTCAACTA+TGG | + | chr3.2:85659500-85659519 | MS.gene015069:CDS | 45.0% | |
| GGAGTAGCTTCTTTGCTCAA+TGG | + | chr3.2:85659832-85659851 | MS.gene015069:CDS | 45.0% | |
| GGGAATGGAAATAATGCTGG+CGG | + | chr3.2:85657787-85657806 | MS.gene015069:CDS | 45.0% | |
| GGTGGGAATGGAAATAATGC+TGG | + | chr3.2:85657784-85657803 | MS.gene015069:CDS | 45.0% | |
| GTAGGACTTCCCCATTGAAA+AGG | - | chr3.2:85659491-85659510 | None:intergenic | 45.0% | |
| GTTTCCCCATAGTTGAAGGT+AGG | - | chr3.2:85659509-85659528 | None:intergenic | 45.0% | |
| TGCCATGATTGGCAAAGGTA+TGG | - | chr3.2:85660273-85660292 | None:intergenic | 45.0% | |
| TTGGGCTTCTCATTCTTCCT+CGG | + | chr3.2:85660490-85660509 | MS.gene015069:CDS | 45.0% | |
| ! | ATGTGCCGACAATCTTACCA+TGG | - | chr3.2:85659309-85659328 | None:intergenic | 45.0% |
| ! | GCTTCCAGCACTACTTGTTA+TGG | + | chr3.2:85659004-85659023 | MS.gene015069:CDS | 45.0% |
| ! | GGACTTGGTCTCTATCATCT+TGG | + | chr3.2:85658785-85658804 | MS.gene015069:CDS | 45.0% |
| !! | GGCATGTTTGGTTCTGTAAC+AGG | + | chr3.2:85659853-85659872 | MS.gene015069:CDS | 45.0% |
| AACTCAGTTGGAGAAGGCCA+AGG | + | chr3.2:85658345-85658364 | MS.gene015069:intron | 50.0% | |
| AGGAACATGCAGGTCCTAGA+TGG | + | chr3.2:85660557-85660576 | MS.gene015069:CDS | 50.0% | |
| CAGGGAAAACGCTGGACTAT+TGG | + | chr3.2:85659969-85659988 | MS.gene015069:intron | 50.0% | |
| CTGATAACAGAAGGTGGCAC+GGG | - | chr3.2:85659702-85659721 | None:intergenic | 50.0% | |
| GCTGATAACAGAAGGTGGCA+CGG | - | chr3.2:85659703-85659722 | None:intergenic | 50.0% | |
| GGAACATGCAGGTCCTAGAT+GGG | + | chr3.2:85660558-85660577 | MS.gene015069:CDS | 50.0% | |
| TATGCAGCTTCTGCAGGTCT+TGG | + | chr3.2:85660421-85660440 | MS.gene015069:intron | 50.0% | |
| TCTTTAGCTGGGTGTGCTAC+TGG | - | chr3.2:85657883-85657902 | None:intergenic | 50.0% | |
| TTGGGATATGCAGCTTCTGC+AGG | + | chr3.2:85660415-85660434 | MS.gene015069:intron | 50.0% | |
| ! | ATTGCGGTATTGAGACACCG+AGG | - | chr3.2:85660510-85660529 | None:intergenic | 50.0% |
| !! | GGACAACACAAAGTGGGCTA+AGG | - | chr3.2:85658748-85658767 | None:intergenic | 50.0% |
| ACACACAATGGTGGCTGCCT+TGG | + | chr3.2:85660718-85660737 | MS.gene015069:CDS | 55.0% | |
| CCACCTTCTGTTATCAGCCG+CGG | + | chr3.2:85659705-85659724 | MS.gene015069:CDS | 55.0% | |
| GGAAATAATGCTGGCGGTGG+CGG | + | chr3.2:85657793-85657812 | MS.gene015069:CDS | 55.0% | |
| GTTCCGCGGCTGATAACAGA+AGG | - | chr3.2:85659711-85659730 | None:intergenic | 55.0% | |
| TAAGACCAGCACGGTCAGTG+CGG | - | chr3.2:85659275-85659294 | None:intergenic | 55.0% | |
| TCTGTTATCAGCCGCGGAAC+TGG | + | chr3.2:85659711-85659730 | MS.gene015069:CDS | 55.0% | |
| ! | ACGGGCTGCATCATCTTCAC+GGG | - | chr3.2:85660771-85660790 | None:intergenic | 55.0% |
| ! | CACGGGCTGCATCATCTTCA+CGG | - | chr3.2:85660772-85660791 | None:intergenic | 55.0% |
| !! | GAAGGTGGAGATGGTGGGAA+TGG | + | chr3.2:85657772-85657791 | MS.gene015069:CDS | 55.0% |
| CCGCGGCTGATAACAGAAGG+TGG | - | chr3.2:85659708-85659727 | None:intergenic | 60.0% | |
| GATGCAGCCCGTGATGACAG+TGG | + | chr3.2:85660779-85660798 | MS.gene015069:CDS | 60.0% | |
| TTACCAGCCAGCCAGTTCCG+CGG | - | chr3.2:85659725-85659744 | None:intergenic | 60.0% | |
| TTATCAGCCGCGGAACTGGC+TGG | + | chr3.2:85659715-85659734 | MS.gene015069:CDS | 60.0% | |
| ! | AATGCTGGCGGTGGCGGTGA+TGG | + | chr3.2:85657799-85657818 | MS.gene015069:CDS | 65.0% |
| ! | AGTTGCCGCACTGACCGTGC+TGG | + | chr3.2:85659267-85659286 | MS.gene015069:CDS | 65.0% |
| CAGCCGCGGAACTGGCTGGC+TGG | + | chr3.2:85659719-85659738 | MS.gene015069:CDS | 75.0% | |
| ! | GCTGGCGGTGGCGGTGATGG+CGG | + | chr3.2:85657802-85657821 | MS.gene015069:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 85657760 | 85660904 | 85657760 | ID=MS.gene015069 |
| chr3.2 | mRNA | 85657760 | 85660904 | 85657760 | ID=MS.gene015069.t1;Parent=MS.gene015069 |
| chr3.2 | exon | 85657760 | 85657949 | 85657760 | ID=MS.gene015069.t1.exon1;Parent=MS.gene015069.t1 |
| chr3.2 | CDS | 85657760 | 85657949 | 85657760 | ID=cds.MS.gene015069.t1;Parent=MS.gene015069.t1 |
| chr3.2 | exon | 85658147 | 85658244 | 85658147 | ID=MS.gene015069.t1.exon2;Parent=MS.gene015069.t1 |
| chr3.2 | CDS | 85658147 | 85658244 | 85658147 | ID=cds.MS.gene015069.t1;Parent=MS.gene015069.t1 |
| chr3.2 | exon | 85658352 | 85658528 | 85658352 | ID=MS.gene015069.t1.exon3;Parent=MS.gene015069.t1 |
| chr3.2 | CDS | 85658352 | 85658528 | 85658352 | ID=cds.MS.gene015069.t1;Parent=MS.gene015069.t1 |
| chr3.2 | exon | 85658641 | 85658817 | 85658641 | ID=MS.gene015069.t1.exon4;Parent=MS.gene015069.t1 |
| chr3.2 | CDS | 85658641 | 85658817 | 85658641 | ID=cds.MS.gene015069.t1;Parent=MS.gene015069.t1 |
| chr3.2 | exon | 85658981 | 85659040 | 85658981 | ID=MS.gene015069.t1.exon5;Parent=MS.gene015069.t1 |
| chr3.2 | CDS | 85658981 | 85659040 | 85658981 | ID=cds.MS.gene015069.t1;Parent=MS.gene015069.t1 |
| chr3.2 | exon | 85659126 | 85659310 | 85659126 | ID=MS.gene015069.t1.exon6;Parent=MS.gene015069.t1 |
| chr3.2 | CDS | 85659126 | 85659310 | 85659126 | ID=cds.MS.gene015069.t1;Parent=MS.gene015069.t1 |
| chr3.2 | exon | 85659472 | 85659568 | 85659472 | ID=MS.gene015069.t1.exon7;Parent=MS.gene015069.t1 |
| chr3.2 | CDS | 85659472 | 85659568 | 85659472 | ID=cds.MS.gene015069.t1;Parent=MS.gene015069.t1 |
| chr3.2 | exon | 85659654 | 85659740 | 85659654 | ID=MS.gene015069.t1.exon8;Parent=MS.gene015069.t1 |
| chr3.2 | CDS | 85659654 | 85659740 | 85659654 | ID=cds.MS.gene015069.t1;Parent=MS.gene015069.t1 |
| chr3.2 | exon | 85659832 | 85659890 | 85659832 | ID=MS.gene015069.t1.exon9;Parent=MS.gene015069.t1 |
| chr3.2 | CDS | 85659832 | 85659890 | 85659832 | ID=cds.MS.gene015069.t1;Parent=MS.gene015069.t1 |
| chr3.2 | exon | 85659972 | 85660063 | 85659972 | ID=MS.gene015069.t1.exon10;Parent=MS.gene015069.t1 |
| chr3.2 | CDS | 85659972 | 85660063 | 85659972 | ID=cds.MS.gene015069.t1;Parent=MS.gene015069.t1 |
| chr3.2 | exon | 85660246 | 85660323 | 85660246 | ID=MS.gene015069.t1.exon11;Parent=MS.gene015069.t1 |
| chr3.2 | CDS | 85660246 | 85660323 | 85660246 | ID=cds.MS.gene015069.t1;Parent=MS.gene015069.t1 |
| chr3.2 | exon | 85660428 | 85660579 | 85660428 | ID=MS.gene015069.t1.exon12;Parent=MS.gene015069.t1 |
| chr3.2 | CDS | 85660428 | 85660579 | 85660428 | ID=cds.MS.gene015069.t1;Parent=MS.gene015069.t1 |
| chr3.2 | exon | 85660686 | 85660904 | 85660686 | ID=MS.gene015069.t1.exon13;Parent=MS.gene015069.t1 |
| chr3.2 | CDS | 85660686 | 85660904 | 85660686 | ID=cds.MS.gene015069.t1;Parent=MS.gene015069.t1 |
| Gene Sequence |
| Protein sequence |
