Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34485.t1 | XP_013469675.1 | 94 | 854 | 50 | 1 | 1 | 854 | 1 | 853 | 5.3e-309 | 1070.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34485.t1 | A0A072VQJ7 | 94.0 | 854 | 50 | 1 | 1 | 854 | 1 | 853 | 3.8e-309 | 1070.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene34485 | 0.860105 | 2.60E-63 | -1.69E-46 |
| MS.gene049178 | MS.gene34485 | 0.814212 | 1.73E-51 | -1.69E-46 |
| MS.gene049368 | MS.gene34485 | 0.805802 | 1.12E-49 | -1.69E-46 |
| MS.gene049807 | MS.gene34485 | 0.807026 | 6.18E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene34485 | 0.840463 | 8.57E-58 | -1.69E-46 |
| MS.gene049983 | MS.gene34485 | 0.809131 | 2.20E-50 | -1.69E-46 |
| MS.gene050224 | MS.gene34485 | 0.813012 | 3.17E-51 | -1.69E-46 |
| MS.gene050359 | MS.gene34485 | 0.815671 | 8.20E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene34485 | 0.808701 | 2.72E-50 | -1.69E-46 |
| MS.gene050551 | MS.gene34485 | 0.81697 | 4.20E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene34485 | 0.843275 | 1.55E-58 | -1.69E-46 |
| MS.gene050654 | MS.gene34485 | 0.802633 | 5.11E-49 | -1.69E-46 |
| MS.gene050657 | MS.gene34485 | 0.800549 | 1.37E-48 | -1.69E-46 |
| MS.gene050838 | MS.gene34485 | 0.82872 | 7.68E-55 | -1.69E-46 |
| MS.gene050941 | MS.gene34485 | 0.806875 | 6.65E-50 | -1.69E-46 |
| MS.gene051102 | MS.gene34485 | 0.818458 | 1.94E-52 | -1.69E-46 |
| MS.gene051490 | MS.gene34485 | 0.806593 | 7.63E-50 | -1.69E-46 |
| MS.gene05224 | MS.gene34485 | 0.808493 | 3.02E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene34485 | 0.841015 | 6.14E-58 | -1.69E-46 |
| MS.gene052342 | MS.gene34485 | 0.800045 | 1.73E-48 | -1.69E-46 |
| MS.gene052463 | MS.gene34485 | 0.835862 | 1.31E-56 | -1.69E-46 |
| MS.gene052516 | MS.gene34485 | 0.808634 | 2.81E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene34485 | 0.856058 | 4.16E-62 | -1.69E-46 |
| MS.gene053079 | MS.gene34485 | 0.85797 | 1.14E-62 | -1.69E-46 |
| MS.gene053143 | MS.gene34485 | 0.812416 | 4.29E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene34485 | 0.820081 | 8.28E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene34485 | 0.811729 | 6.05E-51 | -1.69E-46 |
| MS.gene054824 | MS.gene34485 | 0.812833 | 3.47E-51 | -1.69E-46 |
| MS.gene055311 | MS.gene34485 | 0.806698 | 7.25E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene34485 | 0.815253 | 1.02E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene34485 | 0.823892 | 1.08E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene34485 | 0.815682 | 8.16E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene34485 | 0.819741 | 9.90E-53 | -1.69E-46 |
| MS.gene055469 | MS.gene34485 | 0.856531 | 3.02E-62 | -1.69E-46 |
| MS.gene055513 | MS.gene34485 | 0.85144 | 8.86E-61 | -1.69E-46 |
| MS.gene055864 | MS.gene34485 | 0.838845 | 2.26E-57 | -1.69E-46 |
| MS.gene056181 | MS.gene34485 | 0.812725 | 3.67E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene34485 | 0.835457 | 1.66E-56 | -1.69E-46 |
| MS.gene056390 | MS.gene34485 | 0.808726 | 2.69E-50 | -1.69E-46 |
| MS.gene056507 | MS.gene34485 | 0.813772 | 2.16E-51 | -1.69E-46 |
| MS.gene056522 | MS.gene34485 | -0.81103 | 8.58E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene34485 | 0.803221 | 3.87E-49 | -1.69E-46 |
| MS.gene057360 | MS.gene34485 | 0.801174 | 1.02E-48 | -1.69E-46 |
| MS.gene057915 | MS.gene34485 | 0.809459 | 1.87E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene34485 | 0.804107 | 2.53E-49 | -1.69E-46 |
| MS.gene058289 | MS.gene34485 | 0.800867 | 1.18E-48 | -1.69E-46 |
| MS.gene058638 | MS.gene34485 | 0.835238 | 1.89E-56 | -1.69E-46 |
| MS.gene058639 | MS.gene34485 | 0.838888 | 2.20E-57 | -1.69E-46 |
| MS.gene058647 | MS.gene34485 | 0.816263 | 6.05E-52 | -1.69E-46 |
| MS.gene058649 | MS.gene34485 | 0.817232 | 3.67E-52 | -1.69E-46 |
| MS.gene058758 | MS.gene34485 | 0.838291 | 3.14E-57 | -1.69E-46 |
| MS.gene058852 | MS.gene34485 | 0.819303 | 1.25E-52 | -1.69E-46 |
| MS.gene059170 | MS.gene34485 | 0.821756 | 3.41E-53 | -1.69E-46 |
| MS.gene059171 | MS.gene34485 | 0.836137 | 1.12E-56 | -1.69E-46 |
| MS.gene059283 | MS.gene34485 | 0.810271 | 1.25E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene34485 | 0.830827 | 2.36E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene34485 | 0.824261 | 8.88E-54 | -1.69E-46 |
| MS.gene059725 | MS.gene34485 | 0.816733 | 4.75E-52 | -1.69E-46 |
| MS.gene059852 | MS.gene34485 | 0.806684 | 7.30E-50 | -1.69E-46 |
| MS.gene060380 | MS.gene34485 | 0.818589 | 1.81E-52 | -1.69E-46 |
| MS.gene060400 | MS.gene34485 | 0.816953 | 4.24E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene34485 | 0.836316 | 1.01E-56 | -1.69E-46 |
| MS.gene060637 | MS.gene34485 | 0.825374 | 4.85E-54 | -1.69E-46 |
| MS.gene060932 | MS.gene34485 | 0.825046 | 5.80E-54 | -1.69E-46 |
| MS.gene061006 | MS.gene34485 | 0.831537 | 1.58E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene34485 | 0.838651 | 2.53E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050376 | MS.gene34485 | PPI |
| MS.gene34485 | MS.gene048780 | PPI |
| MS.gene34485 | MS.gene035588 | PPI |
| MS.gene019289 | MS.gene34485 | PPI |
| MS.gene34485 | MS.gene072801 | PPI |
| MS.gene34485 | MS.gene030426 | PPI |
| MS.gene34485 | MS.gene72170 | PPI |
| MS.gene015570 | MS.gene34485 | PPI |
| MS.gene34485 | MS.gene070339 | PPI |
| MS.gene012563 | MS.gene34485 | PPI |
| MS.gene048777 | MS.gene34485 | PPI |
| MS.gene34485 | MS.gene57758 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34485.t1 | MTR_1g100633 | 97.892 | 854 | 17 | 1 | 1 | 854 | 1 | 853 | 0.0 | 1691 |
| MS.gene34485.t1 | MTR_1g100633 | 97.719 | 789 | 17 | 1 | 1 | 789 | 1 | 788 | 0.0 | 1565 |
| MS.gene34485.t1 | MTR_1g100633 | 97.677 | 775 | 17 | 1 | 1 | 775 | 1 | 774 | 0.0 | 1536 |
| MS.gene34485.t1 | MTR_8g097350 | 37.940 | 767 | 395 | 12 | 1 | 698 | 1 | 755 | 3.33e-141 | 444 |
| MS.gene34485.t1 | MTR_8g097350 | 35.938 | 192 | 92 | 4 | 691 | 853 | 842 | 1031 | 2.57e-17 | 87.4 |
| MS.gene34485.t1 | MTR_8g097350 | 37.662 | 770 | 396 | 11 | 1 | 698 | 1 | 758 | 5.73e-141 | 442 |
| MS.gene34485.t1 | MTR_5g010520 | 36.763 | 797 | 426 | 14 | 1 | 727 | 1 | 789 | 6.20e-140 | 439 |
| MS.gene34485.t1 | MTR_5g010520 | 36.763 | 797 | 426 | 14 | 1 | 727 | 1 | 789 | 8.47e-139 | 439 |
| MS.gene34485.t1 | MTR_5g010520 | 72.727 | 55 | 15 | 0 | 799 | 853 | 1007 | 1061 | 5.12e-15 | 80.1 |
| MS.gene34485.t1 | MTR_0415s0010 | 42.128 | 235 | 118 | 6 | 191 | 419 | 51 | 273 | 5.16e-38 | 144 |
| MS.gene34485.t1 | MTR_3g073620 | 27.930 | 401 | 218 | 10 | 5 | 342 | 7 | 399 | 5.23e-37 | 151 |
| MS.gene34485.t1 | MTR_0415s0020 | 40.000 | 210 | 126 | 0 | 489 | 698 | 18 | 227 | 1.10e-34 | 136 |
| MS.gene34485.t1 | MTR_1g062200 | 26.809 | 470 | 255 | 12 | 1 | 413 | 1 | 438 | 7.38e-25 | 112 |
| MS.gene34485.t1 | MTR_1g062200 | 26.809 | 470 | 255 | 12 | 1 | 413 | 1 | 438 | 7.91e-25 | 112 |
| MS.gene34485.t1 | MTR_1g090807 | 31.387 | 137 | 78 | 7 | 15 | 145 | 42 | 168 | 8.30e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34485.t1 | AT5G52280 | 43.407 | 910 | 400 | 20 | 1 | 853 | 1 | 852 | 0.0 | 597 |
| MS.gene34485.t1 | AT5G41140 | 36.673 | 998 | 471 | 25 | 1 | 853 | 1 | 982 | 3.00e-157 | 485 |
| MS.gene34485.t1 | AT5G41140 | 36.575 | 987 | 480 | 23 | 1 | 853 | 1 | 975 | 4.66e-154 | 477 |
| MS.gene34485.t1 | AT1G63300 | 39.258 | 782 | 420 | 16 | 1 | 732 | 1 | 777 | 4.66e-139 | 439 |
| MS.gene34485.t1 | AT1G22060 | 26.239 | 686 | 404 | 16 | 5 | 617 | 7 | 663 | 2.92e-40 | 162 |
| MS.gene34485.t1 | AT1G22060 | 26.239 | 686 | 404 | 16 | 5 | 617 | 7 | 663 | 2.92e-40 | 162 |
Find 135 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGCTCTTGATTGCATTTC+TGG | 0.028652 | 1.2:+75396167 | None:intergenic |
| CTCAAATTCTGAACTTCTTT+TGG | 0.164026 | 1.2:-75396905 | MS.gene34485:CDS |
| TTCAAGATGGGACTTGTTTA+TGG | 0.179533 | 1.2:-75398742 | MS.gene34485:CDS |
| GCCCTTGAAATTTGCAAATT+CGG | 0.204924 | 1.2:-75398448 | MS.gene34485:CDS |
| TGAAAATCAAGTTAAGTCTT+TGG | 0.245483 | 1.2:-75396467 | MS.gene34485:CDS |
| TATTCGTGTTCCTTTCCTTT+AGG | 0.262189 | 1.2:+75394959 | None:intergenic |
| CCCTTGAAATTTGCAAATTC+GGG | 0.262697 | 1.2:-75398447 | MS.gene34485:CDS |
| TTGAATCTGTTAAACTTGTT+AGG | 0.276431 | 1.2:-75398706 | MS.gene34485:CDS |
| CAGGGACTCTTCTGCTTGAA+TGG | 0.294165 | 1.2:+75396360 | None:intergenic |
| GATCAAAGCTGTATTCAAAT+TGG | 0.298730 | 1.2:-75399098 | MS.gene34485:CDS |
| AATTCTCTATTTCACTATTC+TGG | 0.302012 | 1.2:+75396743 | None:intergenic |
| ACAAAAGAATAAGGAAATAT+TGG | 0.304705 | 1.2:-75396854 | MS.gene34485:CDS |
| CTTGTTAGGGATTCAAAATC+AGG | 0.313625 | 1.2:-75398692 | MS.gene34485:CDS |
| TTGTAGGGTTCTTCAAAATC+TGG | 0.322934 | 1.2:-75398540 | MS.gene34485:intron |
| TATTGTGTCTCGTCTTTCTC+AGG | 0.325981 | 1.2:+75396341 | None:intergenic |
| AAAGGAAAGGAACACGAATA+TGG | 0.334534 | 1.2:-75394956 | MS.gene34485:CDS |
| GAGTTCTGTCTGAAGCTATA+GGG | 0.337641 | 1.2:+75397456 | None:intergenic |
| GAATGCATTGATGGTATCTT+TGG | 0.340165 | 1.2:-75398813 | MS.gene34485:CDS |
| AAGGGCAGAGAAACAGTAAT+TGG | 0.340819 | 1.2:+75398465 | None:intergenic |
| AATGCTAGAACAAAAGAATA+AGG | 0.342812 | 1.2:-75396863 | MS.gene34485:CDS |
| CTGTACTGCCATAGCTCAAT+TGG | 0.348542 | 1.2:+75397778 | None:intergenic |
| TTCTTCAAAATCTGGCTACT+TGG | 0.349811 | 1.2:-75398532 | MS.gene34485:CDS |
| TCAGCATCAGATGGAAGTTT+AGG | 0.361910 | 1.2:-75397351 | MS.gene34485:CDS |
| TCAGTCCTGGGGTAGCTTCA+TGG | 0.364313 | 1.2:-75397485 | MS.gene34485:CDS |
| CATTCAATAATTCCTTTGTA+AGG | 0.376479 | 1.2:+75394992 | None:intergenic |
| CAGATGGAAGTTTAGGTGAT+TGG | 0.379221 | 1.2:-75397344 | MS.gene34485:CDS |
| TCAAGATGGGACTTGTTTAT+GGG | 0.381612 | 1.2:-75398741 | MS.gene34485:CDS |
| GCCTCAACTGTTCCTCTTGG+TGG | 0.382303 | 1.2:+75397429 | None:intergenic |
| TATCGCATCTGAGCAGCTTC+AGG | 0.385097 | 1.2:-75396314 | MS.gene34485:CDS |
| CACAAAATCAAGTGCATAAG+AGG | 0.388926 | 1.2:-75397398 | MS.gene34485:CDS |
| TGAGTTCTGTCTGAAGCTAT+AGG | 0.391702 | 1.2:+75397455 | None:intergenic |
| GCTTCAGTTAGATGCAATAA+AGG | 0.391713 | 1.2:-75396992 | MS.gene34485:CDS |
| GAAGAGGCAGGCAGAATTAT+CGG | 0.394976 | 1.2:-75397223 | MS.gene34485:CDS |
| GCGGAACCACAACAGGCTTA+TGG | 0.395493 | 1.2:-75396200 | MS.gene34485:CDS |
| TGAATCTGTTAAACTTGTTA+GGG | 0.399721 | 1.2:-75398705 | MS.gene34485:CDS |
| GGAAACTGAACTGAAAGAAA+TGG | 0.401729 | 1.2:-75394935 | MS.gene34485:CDS |
| ATCGTCATTGGTTTCTATCA+AGG | 0.402580 | 1.2:-75396494 | MS.gene34485:CDS |
| GAAAGATTACAGGAGGCTTC+AGG | 0.405465 | 1.2:-75397291 | MS.gene34485:CDS |
| TATTGGATCTATCTTCCAAT+AGG | 0.408356 | 1.2:-75396837 | MS.gene34485:CDS |
| CAAGACAAATCAATGGTCTC+AGG | 0.409972 | 1.2:-75397137 | MS.gene34485:CDS |
| TTTCTTCTAGTCTCTTCACT+TGG | 0.412470 | 1.2:+75396545 | None:intergenic |
| AAACATATATCTCAATTAGA+AGG | 0.412778 | 1.2:-75395899 | MS.gene34485:CDS |
| GCCCGAATTTGCAAATTTCA+AGG | 0.415467 | 1.2:+75398446 | None:intergenic |
| GCATCAAATGGCATCAGTCC+TGG | 0.418524 | 1.2:-75397498 | MS.gene34485:CDS |
| TGTGTTTCATTTCATTGTGC+TGG | 0.418901 | 1.2:+75395960 | None:intergenic |
| TGCAGAAATGGGGAAGATAA+TGG | 0.433442 | 1.2:-75397837 | MS.gene34485:intron |
| CTCATTGTCTCTTGAGGTCA+TGG | 0.434335 | 1.2:+75395802 | None:intergenic |
| ATTATTATTGAAGTTCTGTT+GGG | 0.435565 | 1.2:+75397071 | None:intergenic |
| TTACAGTTGCAACAATGAAA+TGG | 0.436006 | 1.2:+75398648 | None:intergenic |
| ATGAATTGCGGAACCACAAC+AGG | 0.437283 | 1.2:-75396207 | MS.gene34485:CDS |
| GTCAAATACAGGCTGGTCAA+TGG | 0.441874 | 1.2:-75397376 | MS.gene34485:CDS |
| CAGTCCTGGGGTAGCTTCAT+GGG | 0.444592 | 1.2:-75397484 | MS.gene34485:CDS |
| GTTGGTTTCCCAACATCATC+TGG | 0.444751 | 1.2:+75398788 | None:intergenic |
| TTGGCCTCAACTGTTCCTCT+TGG | 0.447378 | 1.2:+75397426 | None:intergenic |
| TATTATTATTGAAGTTCTGT+TGG | 0.451599 | 1.2:+75397070 | None:intergenic |
| TTCTTCTAGTCTCTTCACTT+GGG | 0.467384 | 1.2:+75396546 | None:intergenic |
| GGAGAAAGAACTGAGAATAC+AGG | 0.469997 | 1.2:-75396446 | MS.gene34485:CDS |
| GCTGTACGTAATCTCAAGAA+TGG | 0.473934 | 1.2:-75394844 | MS.gene34485:CDS |
| AGAAGAAAAGATAGAGATGC+AGG | 0.477881 | 1.2:-75396530 | MS.gene34485:CDS |
| AGAAGCAGAATTAAATGCTA+TGG | 0.479810 | 1.2:-75395861 | MS.gene34485:CDS |
| TCAAATACAGGCTGGTCAAT+GGG | 0.480928 | 1.2:-75397375 | MS.gene34485:CDS |
| CATCAAATGGCATCAGTCCT+GGG | 0.483449 | 1.2:-75397497 | MS.gene34485:CDS |
| ATCAAAATCAGAAATGCATA+AGG | 0.483727 | 1.2:-75395756 | MS.gene34485:intron |
| GAATGAAGTGGCAGTCCTAA+AGG | 0.485055 | 1.2:-75394974 | MS.gene34485:CDS |
| ACAAAGGCACAGGGATGAAA+AGG | 0.486938 | 1.2:-75396020 | MS.gene34485:CDS |
| TGATGCATCGGATCTACTCT+TGG | 0.487712 | 1.2:+75397515 | None:intergenic |
| TCTGAAATTTGCAGAGGTAG+AGG | 0.487867 | 1.2:-75394890 | MS.gene34485:CDS |
| GTTACAAGCACTTCGGAAGC+AGG | 0.487924 | 1.2:-75397193 | MS.gene34485:CDS |
| AGTTTAGGTGATTGGACAAA+CGG | 0.490146 | 1.2:-75397336 | MS.gene34485:CDS |
| GTGAGATTGTTTCTCTGAAG+AGG | 0.495168 | 1.2:-75397239 | MS.gene34485:CDS |
| GAGAAAACTGCTGTTCAAGA+TGG | 0.500999 | 1.2:-75398755 | MS.gene34485:CDS |
| TCTTCAAAATCTGGCTACTT+GGG | 0.505506 | 1.2:-75398531 | MS.gene34485:CDS |
| TAAATTTGAAGATGAACTCC+AGG | 0.505676 | 1.2:-75396419 | MS.gene34485:CDS |
| AAGAGACAATGAGGCTGCTA+AGG | 0.508811 | 1.2:-75395792 | MS.gene34485:CDS |
| AGCAGCCTCATTGTCTCTTG+AGG | 0.509235 | 1.2:+75395796 | None:intergenic |
| TTGAAGATGCACAAAGGCAC+AGG | 0.510046 | 1.2:-75396030 | MS.gene34485:CDS |
| ATTGTGTCTCGTCTTTCTCA+GGG | 0.510679 | 1.2:+75396342 | None:intergenic |
| GCTGTGGAAATTTATAATGA+TGG | 0.510768 | 1.2:-75397813 | MS.gene34485:CDS |
| CTTTGGTGCCAGATGATGTT+GGG | 0.511310 | 1.2:-75398796 | MS.gene34485:CDS |
| ACACAGTTTGCAGAAAGAAC+AGG | 0.512040 | 1.2:-75395942 | MS.gene34485:CDS |
| TTTCTTCCATAAGCCTGTTG+TGG | 0.519288 | 1.2:+75396194 | None:intergenic |
| AGATCAACATGAATTGAAAG+TGG | 0.519867 | 1.2:-75396134 | MS.gene34485:CDS |
| AGTAGATCCGATGCATCAAA+TGG | 0.520711 | 1.2:-75397510 | MS.gene34485:CDS |
| CCCGAATTTGCAAATTTCAA+GGG | 0.521489 | 1.2:+75398447 | None:intergenic |
| CTGAAATTTGCAGAGGTAGA+GGG | 0.524057 | 1.2:-75394889 | MS.gene34485:CDS |
| AGAAAGACAACAGCTTGTTA+TGG | 0.526698 | 1.2:-75394866 | MS.gene34485:CDS |
| TTACAGGAGGCTTCAGGCAA+TGG | 0.529567 | 1.2:-75397285 | MS.gene34485:CDS |
| AAAGGAATTATTGAATGAAG+TGG | 0.532662 | 1.2:-75394986 | MS.gene34485:CDS |
| AGAAATGCAATCAAGAGCTC+AGG | 0.533105 | 1.2:-75396165 | MS.gene34485:CDS |
| AGTCTGATATTGATAATACT+AGG | 0.533275 | 1.2:-75397014 | MS.gene34485:CDS |
| CTGAAAACATGTTCAAGTCA+TGG | 0.540034 | 1.2:-75399135 | None:intergenic |
| ATTGGAATTTCAAGCAACTC+AGG | 0.543027 | 1.2:-75399080 | MS.gene34485:intron |
| AGAAAACTGCTGTTCAAGAT+GGG | 0.543774 | 1.2:-75398754 | MS.gene34485:CDS |
| GATTGTTTCTCTGAAGAGGC+AGG | 0.546222 | 1.2:-75397235 | MS.gene34485:CDS |
| GCCTCCTGTAATCTTTCTCT+CGG | 0.547618 | 1.2:+75397297 | None:intergenic |
| GGAATGGATGCTGCAAGCAC+TGG | 0.552828 | 1.2:-75395223 | MS.gene34485:CDS |
| CTCAAGAATAACAGAGGACG+AGG | 0.553689 | 1.2:-75395830 | MS.gene34485:CDS |
| ACTGATGCCATTTGATGCAT+CGG | 0.558366 | 1.2:+75397503 | None:intergenic |
| GTGCATAAGAGGTCAAATAC+AGG | 0.566002 | 1.2:-75397387 | MS.gene34485:CDS |
| TATCTTACAGAATAGCAACT+TGG | 0.568025 | 1.2:-75397538 | MS.gene34485:intron |
| AGTTCTGTCTGAAGCTATAG+GGG | 0.571501 | 1.2:+75397457 | None:intergenic |
| TCATCCCATGAAGCTACCCC+AGG | 0.575983 | 1.2:+75397480 | None:intergenic |
| CATGTTACAAAATGAACACT+CGG | 0.582030 | 1.2:-75396599 | MS.gene34485:CDS |
| TCTTTGGTGCCAGATGATGT+TGG | 0.584848 | 1.2:-75398797 | MS.gene34485:CDS |
| TCCGAGAGAAAGATTACAGG+AGG | 0.587723 | 1.2:-75397298 | MS.gene34485:CDS |
| TTGAAACACCAATTGAGCTA+TGG | 0.589258 | 1.2:-75397786 | MS.gene34485:CDS |
| TATATCTCAATTAGAAGGAG+AGG | 0.593443 | 1.2:-75395894 | MS.gene34485:CDS |
| ACAGGTAACTATTCAGAATG+TGG | 0.594916 | 1.2:-75397973 | MS.gene34485:intron |
| CGCATCTGAGCAGCTTCAGG+AGG | 0.596198 | 1.2:-75396311 | MS.gene34485:CDS |
| GTAACTATTCAGAATGTGGA+AGG | 0.605000 | 1.2:-75397969 | MS.gene34485:CDS |
| CTACCTTATTTGCAGAAATG+GGG | 0.605496 | 1.2:-75397847 | MS.gene34485:intron |
| AAGTGGCAGTCCTAAAGGAA+AGG | 0.605693 | 1.2:-75394969 | MS.gene34485:CDS |
| AATTTATCAAGACAAATCAA+TGG | 0.606801 | 1.2:-75397144 | MS.gene34485:CDS |
| TCGAAGAAGCTGATGAATTG+CGG | 0.607639 | 1.2:-75396219 | MS.gene34485:CDS |
| TCTTCTTAAGAATGAAAATG+TGG | 0.611817 | 1.2:-75396662 | MS.gene34485:CDS |
| GATTAGTCTGAAATTTGCAG+AGG | 0.613349 | 1.2:-75394896 | MS.gene34485:CDS |
| TCAATGGGTTCAGCATCAGA+TGG | 0.615920 | 1.2:-75397360 | MS.gene34485:CDS |
| AAGACAAATCAATGGTCTCA+GGG | 0.617123 | 1.2:-75397136 | MS.gene34485:CDS |
| TGGGGAAGATAATGGTGCTG+TGG | 0.626676 | 1.2:-75397829 | MS.gene34485:CDS |
| ATAAGAGGTCAAATACAGGC+TGG | 0.635907 | 1.2:-75397383 | MS.gene34485:CDS |
| AACTAGAGTTACAAGCACTT+CGG | 0.636170 | 1.2:-75397200 | MS.gene34485:CDS |
| ACTGGTATTAGCAAGTCTGA+AGG | 0.642094 | 1.2:-75395205 | MS.gene34485:CDS |
| TGAAGATGCACAAAGGCACA+GGG | 0.646468 | 1.2:-75396029 | MS.gene34485:CDS |
| CAGTTTGCAGAAAGAACAGG+TGG | 0.646491 | 1.2:-75395939 | MS.gene34485:CDS |
| TGATGCTGAACGCCTTACAA+AGG | 0.649461 | 1.2:-75395004 | MS.gene34485:CDS |
| GTATTAGCAAGTCTGAAGGA+AGG | 0.654276 | 1.2:-75395201 | MS.gene34485:intron |
| CATGACCTCAAGAGACAATG+AGG | 0.664100 | 1.2:-75395801 | MS.gene34485:CDS |
| ATCAAATGGCATCAGTCCTG+GGG | 0.667145 | 1.2:-75397496 | MS.gene34485:CDS |
| TGGAAGGATATACTGCCGAA+AGG | 0.668488 | 1.2:-75397953 | MS.gene34485:intron |
| CAGAACTCAATGCCACCAAG+AGG | 0.670351 | 1.2:-75397441 | MS.gene34485:CDS |
| AAGAAGCTCAAGAATAACAG+AGG | 0.670995 | 1.2:-75395836 | MS.gene34485:CDS |
| GCCACCAAGAGGAACAGTTG+AGG | 0.674754 | 1.2:-75397430 | MS.gene34485:CDS |
| AAGAACTTGAAGATGCACAA+AGG | 0.694127 | 1.2:-75396036 | MS.gene34485:CDS |
| GAATTGTTATAAGCAACGCG+AGG | 0.741429 | 1.2:-75396725 | MS.gene34485:CDS |
| GCTTATAAAAGAGCTCACAG+TGG | 0.747992 | 1.2:-75396692 | MS.gene34485:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCAACAAAATATATTA+TGG | + | chr1.2:75398701-75398720 | None:intergenic | 10.0% |
| !!! | AAACTAACTTTTATTATTTT+TGG | - | chr1.2:75398914-75398933 | MS.gene34485:intron | 10.0% |
| !!! | AAAGTTTAAATCTTTTTTTA+TGG | - | chr1.2:75395391-75395410 | MS.gene34485:intron | 10.0% |
| !!! | AAATAATAAAAGTTAGTTTT+TGG | + | chr1.2:75398913-75398932 | None:intergenic | 10.0% |
| !!! | GTAAATATAATTTTATTCAA+TGG | + | chr1.2:75396385-75396404 | None:intergenic | 10.0% |
| !!! | TACAATAACATTTTTTATTT+TGG | - | chr1.2:75398439-75398458 | MS.gene34485:CDS | 10.0% |
| !! | AATGTAAAATGATTTATGTT+TGG | - | chr1.2:75395704-75395723 | MS.gene34485:intron | 15.0% |
| !! | TTAATATCTGATAATAAGTA+TGG | + | chr1.2:75398242-75398261 | None:intergenic | 15.0% |
| !!! | ATGATCAAATATTTTCTTTT+AGG | + | chr1.2:75398626-75398645 | None:intergenic | 15.0% |
| !!! | TGATTTTGTAAAATTGATTA+TGG | - | chr1.2:75395668-75395687 | MS.gene34485:intron | 15.0% |
| !!! | TTTTTCATTATACAACAATT+AGG | + | chr1.2:75394967-75394986 | None:intergenic | 15.0% |
| !! | AAACATATATCTCAATTAGA+AGG | - | chr1.2:75398059-75398078 | MS.gene34485:intron | 20.0% |
| !! | AAGTACAAAAGAAAAAACAA+TGG | - | chr1.2:75397866-75397885 | MS.gene34485:intron | 20.0% |
| !! | AATTTATCAAGACAAATCAA+TGG | - | chr1.2:75396814-75396833 | MS.gene34485:CDS | 20.0% |
| !! | ACAAAAGAATAAGGAAATAT+TGG | - | chr1.2:75397104-75397123 | MS.gene34485:CDS | 20.0% |
| !! | AGTTTAACAGATTCAAAAAT+TGG | + | chr1.2:75395248-75395267 | None:intergenic | 20.0% |
| !! | ATTAAATTAACTGTAGGTTA+TGG | + | chr1.2:75396041-75396060 | None:intergenic | 20.0% |
| !! | ATTATTATTGAAGTTCTGTT+GGG | + | chr1.2:75396890-75396909 | None:intergenic | 20.0% |
| !! | TATTATTATTGAAGTTCTGT+TGG | + | chr1.2:75396891-75396910 | None:intergenic | 20.0% |
| !!! | ATTGTTTTGTACTTAAAAGA+AGG | - | chr1.2:75395355-75395374 | MS.gene34485:intron | 20.0% |
| !!! | TTTTTTTATGGATTCTTGTA+GGG | - | chr1.2:75395403-75395422 | MS.gene34485:intron | 20.0% |
| ! | AAAGGAATTATTGAATGAAG+TGG | - | chr1.2:75398972-75398991 | MS.gene34485:intron | 25.0% |
| ! | AATGCTAGAACAAAAGAATA+AGG | - | chr1.2:75397095-75397114 | MS.gene34485:CDS | 25.0% |
| ! | AATTCTCTATTTCACTATTC+TGG | + | chr1.2:75397218-75397237 | None:intergenic | 25.0% |
| ! | ACACTATCAAATCTGAAAAT+GGG | - | chr1.2:75394935-75394954 | MS.gene34485:CDS | 25.0% |
| ! | AGTAATAACCTTAGAATCTA+AGG | - | chr1.2:75398376-75398395 | MS.gene34485:intron | 25.0% |
| ! | AGTTATCACTCACAATAAAA+AGG | - | chr1.2:75398342-75398361 | MS.gene34485:intron | 25.0% |
| ! | ATCAAAATCAGAAATGCATA+AGG | - | chr1.2:75398202-75398221 | MS.gene34485:intron | 25.0% |
| ! | ATGAAAAAAACATGTTTCCT+AGG | - | chr1.2:75394979-75394998 | MS.gene34485:CDS | 25.0% |
| ! | CATCCATATAACAAAACATT+TGG | - | chr1.2:75398848-75398867 | MS.gene34485:intron | 25.0% |
| ! | CATTCAATAATTCCTTTGTA+AGG | + | chr1.2:75398969-75398988 | None:intergenic | 25.0% |
| ! | GCAATGATTAAATTAACTGT+AGG | + | chr1.2:75396047-75396066 | None:intergenic | 25.0% |
| ! | GTTTATGAAAAAGAAATGAG+TGG | - | chr1.2:75396997-75397016 | MS.gene34485:CDS | 25.0% |
| ! | TAAAAGAAGGATATGTTGAT+TGG | - | chr1.2:75395368-75395387 | MS.gene34485:intron | 25.0% |
| ! | TACACTATCAAATCTGAAAA+TGG | - | chr1.2:75394934-75394953 | MS.gene34485:CDS | 25.0% |
| ! | TCAAATGAATAAATCCAAAC+AGG | + | chr1.2:75396277-75396296 | None:intergenic | 25.0% |
| ! | TCTTCTTAAGAATGAAAATG+TGG | - | chr1.2:75397296-75397315 | MS.gene34485:CDS | 25.0% |
| ! | TGAAAATCAAGTTAAGTCTT+TGG | - | chr1.2:75397491-75397510 | MS.gene34485:CDS | 25.0% |
| !! | AATTTTATCTCCTTCAAAAG+TGG | - | chr1.2:75395818-75395837 | MS.gene34485:CDS | 25.0% |
| !! | ACACAGAATTAAATGTTTTG+CGG | - | chr1.2:75397178-75397197 | MS.gene34485:CDS | 25.0% |
| !! | AGTCTGATATTGATAATACT+AGG | - | chr1.2:75396944-75396963 | MS.gene34485:CDS | 25.0% |
| !! | TGATTTTTGCAACATGAAAA+GGG | - | chr1.2:75398714-75398733 | MS.gene34485:CDS | 25.0% |
| !! | TTGAATCTGTTAAACTTGTT+AGG | - | chr1.2:75395252-75395271 | MS.gene34485:intron | 25.0% |
| !! | TTGATTTTTGCAACATGAAA+AGG | - | chr1.2:75398713-75398732 | MS.gene34485:CDS | 25.0% |
| !!! | AATCTCACTTTTGAGATTTT+CGG | + | chr1.2:75396707-75396726 | None:intergenic | 25.0% |
| !!! | AATCTTTTGAGATTTCCTAT+TGG | + | chr1.2:75397139-75397158 | None:intergenic | 25.0% |
| !!! | AATGCATTCTTTTTCATCTT+TGG | + | chr1.2:75395134-75395153 | None:intergenic | 25.0% |
| !!! | CAAATGTTTTGTTATATGGA+TGG | + | chr1.2:75398850-75398869 | None:intergenic | 25.0% |
| !!! | CTTTTTTTATGGATTCTTGT+AGG | - | chr1.2:75395402-75395421 | MS.gene34485:intron | 25.0% |
| !!! | GAAAAGTGTACATATCATTT+TGG | + | chr1.2:75398412-75398431 | None:intergenic | 25.0% |
| !!! | GTATGAATCTGATTTTGATT+AGG | - | chr1.2:75395106-75395125 | MS.gene34485:intron | 25.0% |
| !!! | TGAATCTGTTAAACTTGTTA+GGG | - | chr1.2:75395253-75395272 | MS.gene34485:intron | 25.0% |
| AAATTCAACTGTAATGAGTG+AGG | - | chr1.2:75398540-75398559 | MS.gene34485:intron | 30.0% | |
| AAGAAAGTAAGAGAGATAGA+GGG | + | chr1.2:75395557-75395576 | None:intergenic | 30.0% | |
| AATTCAACTGTAATGAGTGA+GGG | - | chr1.2:75398541-75398560 | MS.gene34485:intron | 30.0% | |
| AGAAGCAGAATTAAATGCTA+TGG | - | chr1.2:75398097-75398116 | MS.gene34485:intron | 30.0% | |
| AGATCAACATGAATTGAAAG+TGG | - | chr1.2:75397824-75397843 | MS.gene34485:CDS | 30.0% | |
| AGATTAGGAGATGAATAATG+TGG | + | chr1.2:75395616-75395635 | None:intergenic | 30.0% | |
| ATACACTAAGAATCAGTGTT+TGG | - | chr1.2:75395849-75395868 | MS.gene34485:CDS | 30.0% | |
| CACTATCAAATCTGAAAATG+GGG | - | chr1.2:75394936-75394955 | MS.gene34485:CDS | 30.0% | |
| CATGTTACAAAATGAACACT+CGG | - | chr1.2:75397359-75397378 | MS.gene34485:CDS | 30.0% | |
| CTAAACAGAAACTTCTAACA+AGG | - | chr1.2:75396339-75396358 | MS.gene34485:CDS | 30.0% | |
| CTTAAGTAGTGCTAAAGATT+AGG | + | chr1.2:75395631-75395650 | None:intergenic | 30.0% | |
| GATCAAAGCTGTATTCAAAT+TGG | - | chr1.2:75394860-75394879 | MS.gene34485:CDS | 30.0% | |
| GATGAAAAAGAATGCATTGA+TGG | - | chr1.2:75395136-75395155 | MS.gene34485:intron | 30.0% | |
| GCTGTGGAAATTTATAATGA+TGG | - | chr1.2:75396145-75396164 | MS.gene34485:CDS | 30.0% | |
| GTGTAAATTTCAAACATCCT+AGG | + | chr1.2:75394999-75395018 | None:intergenic | 30.0% | |
| GTTACAATCTTGATGAAGTA+AGG | - | chr1.2:75396209-75396228 | MS.gene34485:CDS | 30.0% | |
| TAAATTTGAAGATGAACTCC+AGG | - | chr1.2:75397539-75397558 | MS.gene34485:intron | 30.0% | |
| TATATCTCAATTAGAAGGAG+AGG | - | chr1.2:75398064-75398083 | MS.gene34485:intron | 30.0% | |
| TATCTTACAGAATAGCAACT+TGG | - | chr1.2:75396420-75396439 | MS.gene34485:CDS | 30.0% | |
| TATTGGATCTATCTTCCAAT+AGG | - | chr1.2:75397121-75397140 | MS.gene34485:CDS | 30.0% | |
| TTACAGTTGCAACAATGAAA+TGG | + | chr1.2:75395313-75395332 | None:intergenic | 30.0% | |
| TTGTTATATGGATGGTAAGA+GGG | + | chr1.2:75398842-75398861 | None:intergenic | 30.0% | |
| ! | AGATGAATTTTCATCGTCAT+TGG | - | chr1.2:75397452-75397471 | MS.gene34485:CDS | 30.0% |
| ! | CTCAAATTCTGAACTTCTTT+TGG | - | chr1.2:75397053-75397072 | MS.gene34485:CDS | 30.0% |
| ! | GAAGGAGATAAAATTGATTC+TGG | + | chr1.2:75395813-75395832 | None:intergenic | 30.0% |
| ! | TCTACCTTATTTGCAGAAAT+GGG | - | chr1.2:75396110-75396129 | MS.gene34485:CDS | 30.0% |
| ! | TTTGTTATATGGATGGTAAG+AGG | + | chr1.2:75398843-75398862 | None:intergenic | 30.0% |
| !! | GCACCAAATGTTTTGTTATA+TGG | + | chr1.2:75398854-75398873 | None:intergenic | 30.0% |
| !!! | GTAGAGTTTTTAGTGCATTT+AGG | + | chr1.2:75396095-75396114 | None:intergenic | 30.0% |
| AAAAAACTGAGCAGGAAGAA+CGG | - | chr1.2:75397574-75397593 | MS.gene34485:intron | 35.0% | |
| AAAGGAAAGGAACACGAATA+TGG | - | chr1.2:75399002-75399021 | MS.gene34485:intron | 35.0% | |
| AACTAGAGTTACAAGCACTT+CGG | - | chr1.2:75396758-75396777 | MS.gene34485:CDS | 35.0% | |
| AAGAACTTGAAGATGCACAA+AGG | - | chr1.2:75397922-75397941 | MS.gene34485:intron | 35.0% | |
| AAGAAGCTCAAGAATAACAG+AGG | - | chr1.2:75398122-75398141 | MS.gene34485:intron | 35.0% | |
| AAGAATCAGTGTTTGGACAT+TGG | - | chr1.2:75395856-75395875 | MS.gene34485:CDS | 35.0% | |
| AAGACAAATCAATGGTCTCA+GGG | - | chr1.2:75396822-75396841 | MS.gene34485:CDS | 35.0% | |
| AATGCATAAGGTAATTGCTC+AGG | - | chr1.2:75398214-75398233 | MS.gene34485:intron | 35.0% | |
| AATTCTATTAAGCGCCTGTT+TGG | - | chr1.2:75396260-75396279 | MS.gene34485:CDS | 35.0% | |
| ACAGGTAACTATTCAGAATG+TGG | - | chr1.2:75395985-75396004 | MS.gene34485:CDS | 35.0% | |
| ACTGAACTCCTTAGATTCTA+AGG | + | chr1.2:75398387-75398406 | None:intergenic | 35.0% | |
| ACTTATTGACGTCGCATATT+AGG | - | chr1.2:75398268-75398287 | MS.gene34485:intron | 35.0% | |
| AGAAAACTGCTGTTCAAGAT+GGG | - | chr1.2:75395204-75395223 | MS.gene34485:CDS | 35.0% | |
| AGAAGAAAAGATAGAGATGC+AGG | - | chr1.2:75397428-75397447 | MS.gene34485:CDS | 35.0% | |
| AGGTAGAAAAAGAAAGCAGT+CGG | - | chr1.2:75396785-75396804 | MS.gene34485:CDS | 35.0% | |
| AGTTTAGGTGATTGGACAAA+CGG | - | chr1.2:75396622-75396641 | MS.gene34485:CDS | 35.0% | |
| ATAACTCAAATACGACGTTG+TGG | + | chr1.2:75398876-75398895 | None:intergenic | 35.0% | |
| ATTGGAATTTCAAGCAACTC+AGG | - | chr1.2:75394878-75394897 | MS.gene34485:CDS | 35.0% | |
| CAAGAAAGTAAGAGAGATAG+AGG | + | chr1.2:75395558-75395577 | None:intergenic | 35.0% | |
| CACAAAATCAAGTGCATAAG+AGG | - | chr1.2:75396560-75396579 | MS.gene34485:CDS | 35.0% | |
| CACATAAGAATTGTCGAAAC+AGG | - | chr1.2:75395967-75395986 | MS.gene34485:CDS | 35.0% | |
| CATTTAGGAGAGAAAGTCAA+AGG | + | chr1.2:75396080-75396099 | None:intergenic | 35.0% | |
| CCCGAATTTGCAAATTTCAA+GGG | + | chr1.2:75395514-75395533 | None:intergenic | 35.0% | |
| CCCTTGAAATTTGCAAATTC+GGG | - | chr1.2:75395511-75395530 | MS.gene34485:intron | 35.0% | |
| CTTGTTAGGGATTCAAAATC+AGG | - | chr1.2:75395266-75395285 | MS.gene34485:intron | 35.0% | |
| GCATATTAGGACAGGTTAAA+TGG | - | chr1.2:75398281-75398300 | MS.gene34485:intron | 35.0% | |
| GCCCTTGAAATTTGCAAATT+CGG | - | chr1.2:75395510-75395529 | MS.gene34485:intron | 35.0% | |
| GCTTCAGTTAGATGCAATAA+AGG | - | chr1.2:75396966-75396985 | MS.gene34485:CDS | 35.0% | |
| GGAAACTGAACTGAAAGAAA+TGG | - | chr1.2:75399023-75399042 | MS.gene34485:intron | 35.0% | |
| GTAACTATTCAGAATGTGGA+AGG | - | chr1.2:75395989-75396008 | MS.gene34485:CDS | 35.0% | |
| TATGGTTCATCTTCACCTTT+CGG | + | chr1.2:75396023-75396042 | None:intergenic | 35.0% | |
| TATTCGTGTTCCTTTCCTTT+AGG | + | chr1.2:75399002-75399021 | None:intergenic | 35.0% | |
| TCTTCAAAATCTGGCTACTT+GGG | - | chr1.2:75395427-75395446 | MS.gene34485:intron | 35.0% | |
| TGTGTTTCATTTCATTGTGC+TGG | + | chr1.2:75398001-75398020 | None:intergenic | 35.0% | |
| TTCTTCAAAATCTGGCTACT+TGG | - | chr1.2:75395426-75395445 | MS.gene34485:intron | 35.0% | |
| TTCTTCTAGTCTCTTCACTT+GGG | + | chr1.2:75397415-75397434 | None:intergenic | 35.0% | |
| TTGAAACACCAATTGAGCTA+TGG | - | chr1.2:75396172-75396191 | MS.gene34485:CDS | 35.0% | |
| TTGTAGGGTTCTTCAAAATC+TGG | - | chr1.2:75395418-75395437 | MS.gene34485:intron | 35.0% | |
| TTTCTTCTAGTCTCTTCACT+TGG | + | chr1.2:75397416-75397435 | None:intergenic | 35.0% | |
| TTTGCAACATGAAAAGGGAA+TGG | - | chr1.2:75398719-75398738 | MS.gene34485:CDS | 35.0% | |
| ! | ATCAGACTTCAAGCTTTTAG+AGG | + | chr1.2:75396932-75396951 | None:intergenic | 35.0% |
| ! | CACTTGATTTTGTGTTGCAT+TGG | + | chr1.2:75396554-75396573 | None:intergenic | 35.0% |
| ! | CTACCTTATTTGCAGAAATG+GGG | - | chr1.2:75396111-75396130 | MS.gene34485:CDS | 35.0% |
| ! | CTCTACCTTATTTGCAGAAA+TGG | - | chr1.2:75396109-75396128 | MS.gene34485:CDS | 35.0% |
| ! | GAATGCATTGATGGTATCTT+TGG | - | chr1.2:75395145-75395164 | MS.gene34485:intron | 35.0% |
| ! | GGAGATAAAATTGATTCTGG+AGG | + | chr1.2:75395810-75395829 | None:intergenic | 35.0% |
| ! | TCAAGATGGGACTTGTTTAT+GGG | - | chr1.2:75395217-75395236 | MS.gene34485:CDS | 35.0% |
| ! | TTCAAGATGGGACTTGTTTA+TGG | - | chr1.2:75395216-75395235 | MS.gene34485:CDS | 35.0% |
| ! | TTTTCCGAGAGAAAGATTAC+AGG | - | chr1.2:75396657-75396676 | MS.gene34485:CDS | 35.0% |
| !! | AACAGTTTTGTAGTGAGTGA+GGG | - | chr1.2:75398481-75398500 | MS.gene34485:CDS | 35.0% |
| !! | AGAAAGACAACAGCTTGTTA+TGG | - | chr1.2:75399092-75399111 | MS.gene34485:CDS | 35.0% |
| !! | ATCGTCATTGGTTTCTATCA+AGG | - | chr1.2:75397464-75397483 | MS.gene34485:CDS | 35.0% |
| !! | ATGTGAAGTTCCACTTTTGA+AGG | + | chr1.2:75395831-75395850 | None:intergenic | 35.0% |
| !! | GATTAGTCTGAAATTTGCAG+AGG | - | chr1.2:75399062-75399081 | MS.gene34485:intron | 35.0% |
| !! | GTTTTCTCTAGTTTCACTGT+TGG | + | chr1.2:75395191-75395210 | None:intergenic | 35.0% |
| !!! | TTTTTTCACTTTGCATAGCC+TGG | + | chr1.2:75397560-75397579 | None:intergenic | 35.0% |
| AAAAACTGAGCAGGAAGAAC+GGG | - | chr1.2:75397575-75397594 | MS.gene34485:intron | 40.0% | |
| AAGGGCAGAGAAACAGTAAT+TGG | + | chr1.2:75395496-75395515 | None:intergenic | 40.0% | |
| AATCAGTGTTTGGACATTGG+TGG | - | chr1.2:75395859-75395878 | MS.gene34485:CDS | 40.0% | |
| ACACAGTTTGCAGAAAGAAC+AGG | - | chr1.2:75398016-75398035 | MS.gene34485:intron | 40.0% | |
| ACTGGTATTAGCAAGTCTGA+AGG | - | chr1.2:75398753-75398772 | MS.gene34485:CDS | 40.0% | |
| AGAAATGCAATCAAGAGCTC+AGG | - | chr1.2:75397793-75397812 | MS.gene34485:CDS | 40.0% | |
| AGTAGATCCGATGCATCAAA+TGG | - | chr1.2:75396448-75396467 | MS.gene34485:CDS | 40.0% | |
| ATAAGAGGTCAAATACAGGC+TGG | - | chr1.2:75396575-75396594 | MS.gene34485:CDS | 40.0% | |
| ATCAGTGTTTGGACATTGGT+GGG | - | chr1.2:75395860-75395879 | MS.gene34485:CDS | 40.0% | |
| ATTGTGTCTCGTCTTTCTCA+GGG | + | chr1.2:75397619-75397638 | None:intergenic | 40.0% | |
| CAAGACAAATCAATGGTCTC+AGG | - | chr1.2:75396821-75396840 | MS.gene34485:CDS | 40.0% | |
| CAGATGGAAGTTTAGGTGAT+TGG | - | chr1.2:75396614-75396633 | MS.gene34485:CDS | 40.0% | |
| CTGAAATTTGCAGAGGTAGA+GGG | - | chr1.2:75399069-75399088 | MS.gene34485:intron | 40.0% | |
| CTTCCCCATTTCTGCAAATA+AGG | + | chr1.2:75396117-75396136 | None:intergenic | 40.0% | |
| GAATTGTTATAAGCAACGCG+AGG | - | chr1.2:75397233-75397252 | MS.gene34485:CDS | 40.0% | |
| GAGAAAACTGCTGTTCAAGA+TGG | - | chr1.2:75395203-75395222 | MS.gene34485:CDS | 40.0% | |
| GCAAAGTGAAAAAACTGAGC+AGG | - | chr1.2:75397566-75397585 | MS.gene34485:intron | 40.0% | |
| GCCCGAATTTGCAAATTTCA+AGG | + | chr1.2:75395515-75395534 | None:intergenic | 40.0% | |
| GCTGTACGTAATCTCAAGAA+TGG | - | chr1.2:75399114-75399133 | MS.gene34485:CDS | 40.0% | |
| GCTTATAAAAGAGCTCACAG+TGG | - | chr1.2:75397266-75397285 | MS.gene34485:CDS | 40.0% | |
| GGAGAAAGAACTGAGAATAC+AGG | - | chr1.2:75397512-75397531 | MS.gene34485:CDS | 40.0% | |
| GGGTTAACGTTAGAATCTCA+TGG | - | chr1.2:75398501-75398520 | MS.gene34485:CDS | 40.0% | |
| GGTAGAAAAAGAAAGCAGTC+GGG | - | chr1.2:75396786-75396805 | MS.gene34485:CDS | 40.0% | |
| GTAATGAGTGAGGGTTAATG+TGG | - | chr1.2:75398550-75398569 | MS.gene34485:intron | 40.0% | |
| GTAGAAAAAGAAAGCAGTCG+GGG | - | chr1.2:75396787-75396806 | MS.gene34485:CDS | 40.0% | |
| GTATTAGCAAGTCTGAAGGA+AGG | - | chr1.2:75398757-75398776 | MS.gene34485:CDS | 40.0% | |
| GTGCATAAGAGGTCAAATAC+AGG | - | chr1.2:75396571-75396590 | MS.gene34485:CDS | 40.0% | |
| TATTGTGTCTCGTCTTTCTC+AGG | + | chr1.2:75397620-75397639 | None:intergenic | 40.0% | |
| TCAGCATCACTGTCAGAATT+AGG | + | chr1.2:75398943-75398962 | None:intergenic | 40.0% | |
| TCAGCATCAGATGGAAGTTT+AGG | - | chr1.2:75396607-75396626 | MS.gene34485:CDS | 40.0% | |
| TCGAAGAAGCTGATGAATTG+CGG | - | chr1.2:75397739-75397758 | MS.gene34485:intron | 40.0% | |
| TGAGCTCTTGATTGCATTTC+TGG | + | chr1.2:75397794-75397813 | None:intergenic | 40.0% | |
| TGCAGAAATGGGGAAGATAA+TGG | - | chr1.2:75396121-75396140 | MS.gene34485:CDS | 40.0% | |
| TTTCTTCCATAAGCCTGTTG+TGG | + | chr1.2:75397767-75397786 | None:intergenic | 40.0% | |
| ! | ACTGATGCCATTTGATGCAT+CGG | + | chr1.2:75396458-75396477 | None:intergenic | 40.0% |
| ! | AGTTCTGTCTGAAGCTATAG+GGG | + | chr1.2:75396504-75396523 | None:intergenic | 40.0% |
| ! | GAGTTCTGTCTGAAGCTATA+GGG | + | chr1.2:75396505-75396524 | None:intergenic | 40.0% |
| ! | GTGAGATTGTTTCTCTGAAG+AGG | - | chr1.2:75396719-75396738 | MS.gene34485:CDS | 40.0% |
| ! | TCAAATACAGGCTGGTCAAT+GGG | - | chr1.2:75396583-75396602 | MS.gene34485:CDS | 40.0% |
| ! | TCTGAAATTTGCAGAGGTAG+AGG | - | chr1.2:75399068-75399087 | MS.gene34485:intron | 40.0% |
| ! | TGAGTTCTGTCTGAAGCTAT+AGG | + | chr1.2:75396506-75396525 | None:intergenic | 40.0% |
| !! | CTTCAAGCTTTTAGAGGTCT+TGG | + | chr1.2:75396926-75396945 | None:intergenic | 40.0% |
| !! | GAACAGTTTTGTAGTGAGTG+AGG | - | chr1.2:75398480-75398499 | MS.gene34485:CDS | 40.0% |
| !!! | CTCACTTTTGAGATTTTCGG+TGG | + | chr1.2:75396704-75396723 | None:intergenic | 40.0% |
| AAGAGACAATGAGGCTGCTA+AGG | - | chr1.2:75398166-75398185 | MS.gene34485:intron | 45.0% | |
| AAGGGAACAAGGGATTCAGA+TGG | + | chr1.2:75398804-75398823 | None:intergenic | 45.0% | |
| AAGTGGCAGTCCTAAAGGAA+AGG | - | chr1.2:75398989-75399008 | MS.gene34485:intron | 45.0% | |
| ATCAAATGGCATCAGTCCTG+GGG | - | chr1.2:75396462-75396481 | MS.gene34485:CDS | 45.0% | |
| ATGAATTGCGGAACCACAAC+AGG | - | chr1.2:75397751-75397770 | MS.gene34485:intron | 45.0% | |
| CAGTTTGCAGAAAGAACAGG+TGG | - | chr1.2:75398019-75398038 | MS.gene34485:intron | 45.0% | |
| CATCAAATGGCATCAGTCCT+GGG | - | chr1.2:75396461-75396480 | MS.gene34485:CDS | 45.0% | |
| CATGACCTCAAGAGACAATG+AGG | - | chr1.2:75398157-75398176 | MS.gene34485:intron | 45.0% | |
| CTCAAGAATAACAGAGGACG+AGG | - | chr1.2:75398128-75398147 | MS.gene34485:intron | 45.0% | |
| CTCATTGTCTCTTGAGGTCA+TGG | + | chr1.2:75398159-75398178 | None:intergenic | 45.0% | |
| CTGTACTGCCATAGCTCAAT+TGG | + | chr1.2:75396183-75396202 | None:intergenic | 45.0% | |
| GAAAGATTACAGGAGGCTTC+AGG | - | chr1.2:75396667-75396686 | MS.gene34485:CDS | 45.0% | |
| GAAGAGGCAGGCAGAATTAT+CGG | - | chr1.2:75396735-75396754 | MS.gene34485:CDS | 45.0% | |
| GAATGAAGTGGCAGTCCTAA+AGG | - | chr1.2:75398984-75399003 | MS.gene34485:intron | 45.0% | |
| GCCTCCTGTAATCTTTCTCT+CGG | + | chr1.2:75396664-75396683 | None:intergenic | 45.0% | |
| GGAGATGAATAATGTGGCTG+TGG | + | chr1.2:75395610-75395629 | None:intergenic | 45.0% | |
| TCCGAGAGAAAGATTACAGG+AGG | - | chr1.2:75396660-75396679 | MS.gene34485:CDS | 45.0% | |
| TGATGCATCGGATCTACTCT+TGG | + | chr1.2:75396446-75396465 | None:intergenic | 45.0% | |
| TGATGCTGAACGCCTTACAA+AGG | - | chr1.2:75398954-75398973 | MS.gene34485:intron | 45.0% | |
| TGGAAGGATATACTGCCGAA+AGG | - | chr1.2:75396005-75396024 | MS.gene34485:CDS | 45.0% | |
| TGGCTGTGGTTGTTGAGAAT+TGG | + | chr1.2:75395596-75395615 | None:intergenic | 45.0% | |
| TTGACGTCGCATATTAGGAC+AGG | - | chr1.2:75398273-75398292 | MS.gene34485:intron | 45.0% | |
| ! | ACAAAGGCACAGGGATGAAA+AGG | - | chr1.2:75397938-75397957 | MS.gene34485:intron | 45.0% |
| ! | GATTGTTTCTCTGAAGAGGC+AGG | - | chr1.2:75396723-75396742 | MS.gene34485:CDS | 45.0% |
| ! | GTCAAATACAGGCTGGTCAA+TGG | - | chr1.2:75396582-75396601 | MS.gene34485:CDS | 45.0% |
| ! | GTTGGTTTCCCAACATCATC+TGG | + | chr1.2:75395173-75395192 | None:intergenic | 45.0% |
| ! | TCAATGGGTTCAGCATCAGA+TGG | - | chr1.2:75396598-75396617 | MS.gene34485:CDS | 45.0% |
| ! | TGAAGATGCACAAAGGCACA+GGG | - | chr1.2:75397929-75397948 | MS.gene34485:intron | 45.0% |
| ! | TTGAAGATGCACAAAGGCAC+AGG | - | chr1.2:75397928-75397947 | MS.gene34485:intron | 45.0% |
| !! | CTTTGGTGCCAGATGATGTT+GGG | - | chr1.2:75395162-75395181 | MS.gene34485:intron | 45.0% |
| !! | TCTTTGGTGCCAGATGATGT+TGG | - | chr1.2:75395161-75395180 | MS.gene34485:intron | 45.0% |
| AGCAGCCTCATTGTCTCTTG+AGG | + | chr1.2:75398165-75398184 | None:intergenic | 50.0% | |
| CAGAACTCAATGCCACCAAG+AGG | - | chr1.2:75396517-75396536 | MS.gene34485:CDS | 50.0% | |
| CAGGGACTCTTCTGCTTGAA+TGG | + | chr1.2:75397601-75397620 | None:intergenic | 50.0% | |
| GCATCAAATGGCATCAGTCC+TGG | - | chr1.2:75396460-75396479 | MS.gene34485:CDS | 50.0% | |
| GTTACAAGCACTTCGGAAGC+AGG | - | chr1.2:75396765-75396784 | MS.gene34485:CDS | 50.0% | |
| TATCGCATCTGAGCAGCTTC+AGG | - | chr1.2:75397644-75397663 | MS.gene34485:intron | 50.0% | |
| TTACAGGAGGCTTCAGGCAA+TGG | - | chr1.2:75396673-75396692 | MS.gene34485:CDS | 50.0% | |
| TTGGCCTCAACTGTTCCTCT+TGG | + | chr1.2:75396535-75396554 | None:intergenic | 50.0% | |
| ! | TGGGGAAGATAATGGTGCTG+TGG | - | chr1.2:75396129-75396148 | MS.gene34485:CDS | 50.0% |
| CAGTCCTGGGGTAGCTTCAT+GGG | - | chr1.2:75396474-75396493 | MS.gene34485:CDS | 55.0% | |
| GCCACCAAGAGGAACAGTTG+AGG | - | chr1.2:75396528-75396547 | MS.gene34485:CDS | 55.0% | |
| GCCTCAACTGTTCCTCTTGG+TGG | + | chr1.2:75396532-75396551 | None:intergenic | 55.0% | |
| GCGGAACCACAACAGGCTTA+TGG | - | chr1.2:75397758-75397777 | MS.gene34485:CDS | 55.0% | |
| GGAATGGATGCTGCAAGCAC+TGG | - | chr1.2:75398735-75398754 | MS.gene34485:CDS | 55.0% | |
| TCAGTCCTGGGGTAGCTTCA+TGG | - | chr1.2:75396473-75396492 | MS.gene34485:CDS | 55.0% | |
| TCATCCCATGAAGCTACCCC+AGG | + | chr1.2:75396481-75396500 | None:intergenic | 55.0% | |
| CGCATCTGAGCAGCTTCAGG+AGG | - | chr1.2:75397647-75397666 | MS.gene34485:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 75394831 | 75399149 | 75394831 | ID=MS.gene34485 |
| chr1.2 | mRNA | 75394831 | 75399149 | 75394831 | ID=MS.gene34485.t1;Parent=MS.gene34485 |
| chr1.2 | exon | 75399081 | 75399149 | 75399081 | ID=MS.gene34485.t1.exon1;Parent=MS.gene34485.t1 |
| chr1.2 | CDS | 75399081 | 75399149 | 75399081 | ID=cds.MS.gene34485.t1;Parent=MS.gene34485.t1 |
| chr1.2 | exon | 75398652 | 75398852 | 75398652 | ID=MS.gene34485.t1.exon2;Parent=MS.gene34485.t1 |
| chr1.2 | CDS | 75398652 | 75398852 | 75398652 | ID=cds.MS.gene34485.t1;Parent=MS.gene34485.t1 |
| chr1.2 | exon | 75398434 | 75398556 | 75398434 | ID=MS.gene34485.t1.exon3;Parent=MS.gene34485.t1 |
| chr1.2 | CDS | 75398434 | 75398556 | 75398434 | ID=cds.MS.gene34485.t1;Parent=MS.gene34485.t1 |
| chr1.2 | exon | 75397954 | 75397991 | 75397954 | ID=MS.gene34485.t1.exon4;Parent=MS.gene34485.t1 |
| chr1.2 | CDS | 75397954 | 75397991 | 75397954 | ID=cds.MS.gene34485.t1;Parent=MS.gene34485.t1 |
| chr1.2 | exon | 75397755 | 75397854 | 75397755 | ID=MS.gene34485.t1.exon5;Parent=MS.gene34485.t1 |
| chr1.2 | CDS | 75397755 | 75397854 | 75397755 | ID=cds.MS.gene34485.t1;Parent=MS.gene34485.t1 |
| chr1.2 | exon | 75395757 | 75397550 | 75395757 | ID=MS.gene34485.t1.exon6;Parent=MS.gene34485.t1 |
| chr1.2 | CDS | 75395757 | 75397550 | 75395757 | ID=cds.MS.gene34485.t1;Parent=MS.gene34485.t1 |
| chr1.2 | exon | 75395202 | 75395245 | 75395202 | ID=MS.gene34485.t1.exon7;Parent=MS.gene34485.t1 |
| chr1.2 | CDS | 75395202 | 75395245 | 75395202 | ID=cds.MS.gene34485.t1;Parent=MS.gene34485.t1 |
| chr1.2 | exon | 75394831 | 75395026 | 75394831 | ID=MS.gene34485.t1.exon8;Parent=MS.gene34485.t1 |
| chr1.2 | CDS | 75394831 | 75395026 | 75394831 | ID=cds.MS.gene34485.t1;Parent=MS.gene34485.t1 |
| Gene Sequence |
| Protein sequence |
