AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene015777

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015777.t1 MTR_8g102930 99.292 424 3 0 1 424 1 424 0.0 877
MS.gene015777.t1 MTR_6g087070 80.047 426 81 4 1 424 1 424 0.0 703
MS.gene015777.t1 MTR_4g126010 68.698 361 111 2 1 360 1 360 0.0 516
MS.gene015777.t1 MTR_3g110180 61.009 436 152 6 1 424 1 430 0.0 515
MS.gene015777.t1 MTR_2g099670 63.706 394 132 5 1 385 1 392 0.0 513
MS.gene015777.t1 MTR_1g042280 64.781 389 128 4 1 385 2 385 0.0 512
MS.gene015777.t1 MTR_3g110180 61.009 436 151 7 1 424 1 429 0.0 511
MS.gene015777.t1 MTR_1g069720 77.181 298 68 0 1 298 1 298 9.63e-178 504
MS.gene015777.t1 MTR_1g004990 58.372 430 162 5 1 422 1 421 4.07e-176 498
MS.gene015777.t1 MTR_1g075870 65.160 376 114 5 1 366 2 370 8.82e-176 499
MS.gene015777.t1 MTR_8g018310 76.589 299 69 1 1 299 1 298 2.62e-175 498
MS.gene015777.t1 MTR_1g075870 72.240 317 85 2 1 314 2 318 4.49e-175 492
MS.gene015777.t1 MTR_7g097160 75.758 297 72 0 1 297 1 297 1.73e-174 496
MS.gene015777.t1 MTR_8g018310 76.589 299 69 1 1 299 1 298 7.43e-174 492
MS.gene015777.t1 MTR_2g039930 57.466 442 159 6 1 423 1 432 2.21e-172 491
MS.gene015777.t1 MTR_1g042280 75.899 278 64 2 40 314 9 286 1.98e-159 452
MS.gene015777.t1 MTR_0492s0030 61.219 361 130 4 1 352 1 360 2.00e-157 449
MS.gene015777.t1 MTR_0543s0020 61.219 361 130 4 1 352 1 360 2.00e-157 449
MS.gene015777.t1 MTR_1g075870 74.231 260 64 2 58 314 2 261 3.82e-146 417
MS.gene015777.t1 MTR_2g099670 62.162 333 115 5 62 385 10 340 4.00e-146 422
MS.gene015777.t1 MTR_2g039930 58.951 324 109 4 82 386 1 319 4.97e-131 383
MS.gene015777.t1 MTR_7g097160 78.571 154 33 0 144 297 25 178 1.04e-87 270
MS.gene015777.t1 MTR_7g006030 36.735 294 166 7 2 278 27 317 3.99e-55 192
MS.gene015777.t1 MTR_1g116210 38.276 290 162 8 2 278 109 394 1.74e-54 192
MS.gene015777.t1 MTR_7g085540 37.543 293 162 8 2 277 137 425 2.18e-53 189
MS.gene015777.t1 MTR_1g007150 36.918 279 163 6 5 273 118 393 1.01e-52 187
MS.gene015777.t1 MTR_3g110240 37.634 279 161 6 5 273 115 390 2.54e-52 186
MS.gene015777.t1 MTR_8g014050 34.752 282 162 6 9 273 128 404 1.42e-47 173
MS.gene015777.t1 MTR_7g116400 55.224 67 29 1 80 145 1 67 2.41e-17 77.0
MS.gene015777.t1 MTR_7g073520 35.385 130 70 4 107 236 250 365 1.05e-13 73.2
MS.gene015777.t1 MTR_7g113490 27.064 218 134 6 9 213 68 273 9.05e-13 70.5
MS.gene015777.t1 MTR_5g009830 30.233 215 134 6 5 213 63 267 2.32e-12 68.9
MS.gene015777.t1 MTR_5g009830 28.372 215 138 5 5 213 63 267 3.58e-12 68.6
MS.gene015777.t1 MTR_2g049790 27.632 228 130 9 3 214 17 225 1.28e-11 66.6
MS.gene015777.t1 MTR_4g132860 28.824 170 104 4 100 269 178 330 1.72e-11 65.9
MS.gene015777.t1 MTR_3g099920 29.167 216 127 8 8 213 18 217 2.86e-11 65.5
MS.gene015777.t1 MTR_8g099095 30.189 212 130 8 9 213 66 266 4.10e-11 65.1
MS.gene015777.t1 MTR_5g007590 44.000 75 34 1 71 145 53 119 4.93e-11 60.5
MS.gene015777.t1 MTR_3g086530 24.895 237 136 8 9 214 93 318 5.44e-11 64.3
MS.gene015777.t1 MTR_3g086530 24.895 237 136 8 9 214 93 318 6.12e-11 64.3
MS.gene015777.t1 MTR_1g090917 27.966 236 155 8 9 236 51 279 6.88e-11 64.3
MS.gene015777.t1 MTR_1g090917 27.966 236 155 8 9 236 51 279 7.01e-11 64.3
MS.gene015777.t1 MTR_5g092815 26.840 231 150 6 9 233 91 308 7.64e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015777.t1 AT4G28880 73.286 423 94 4 1 415 1 412 0.0 644
MS.gene015777.t1 AT4G28880 73.286 423 94 4 1 415 1 412 0.0 644
MS.gene015777.t1 AT4G28880 73.286 423 94 4 1 415 1 412 0.0 644
MS.gene015777.t1 AT4G28880 73.286 423 94 4 1 415 1 412 0.0 644
MS.gene015777.t1 AT4G28860 72.471 425 93 7 1 415 1 411 0.0 624
MS.gene015777.t1 AT4G28860 77.929 367 69 3 1 359 1 363 0.0 603
MS.gene015777.t1 AT5G57015 73.270 318 79 1 1 312 1 318 1.38e-178 505
MS.gene015777.t1 AT4G26100 70.326 337 94 3 1 333 1 335 4.71e-178 504
MS.gene015777.t1 AT1G72710 69.591 342 102 2 1 341 1 341 6.39e-176 499
MS.gene015777.t1 AT3G23340 58.571 420 164 3 1 420 1 410 3.58e-175 497
MS.gene015777.t1 AT2G19470 59.653 404 131 4 1 389 1 387 1.23e-174 495
MS.gene015777.t1 AT1G03930 73.737 297 78 0 1 297 1 297 5.20e-173 493
MS.gene015777.t1 AT4G28540 74.161 298 77 0 1 298 5 302 1.42e-172 492
MS.gene015777.t1 AT5G44100 74.074 297 77 0 1 297 1 297 1.67e-172 491
MS.gene015777.t1 AT5G44100 74.074 297 77 0 1 297 1 297 1.67e-172 491
MS.gene015777.t1 AT5G43320 56.849 438 168 6 1 419 1 436 2.62e-171 488
MS.gene015777.t1 AT1G04440 64.345 359 114 4 1 346 1 358 4.68e-169 482
MS.gene015777.t1 AT5G43320 74.411 297 76 0 1 297 1 297 1.47e-168 477
MS.gene015777.t1 AT5G43320 74.411 297 76 0 1 297 1 297 1.47e-168 477
MS.gene015777.t1 AT4G14340 56.813 433 165 7 1 423 7 427 6.18e-167 476
MS.gene015777.t1 AT4G14340 68.111 323 97 2 1 318 7 328 5.91e-166 471
MS.gene015777.t1 AT3G23340 55.952 420 161 4 1 420 1 396 1.59e-162 464
MS.gene015777.t1 AT4G08800 62.585 294 78 2 1 294 1 262 8.64e-136 391
MS.gene015777.t1 AT2G25760 38.112 286 160 5 5 273 101 386 9.75e-56 195
MS.gene015777.t1 AT3G13670 36.735 294 166 7 2 278 127 417 4.86e-55 194
MS.gene015777.t1 AT3G03940 38.225 293 160 8 2 277 130 418 2.21e-54 192
MS.gene015777.t1 AT2G25760 37.762 286 158 6 5 273 101 383 1.70e-53 189
MS.gene015777.t1 AT5G18190 37.288 295 164 8 2 279 120 410 8.49e-53 187
MS.gene015777.t1 AT5G18190 37.288 295 164 8 2 279 120 410 8.49e-53 187
MS.gene015777.t1 AT4G23650 30.374 214 133 6 8 215 77 280 1.02e-13 73.2
MS.gene015777.t1 AT3G06030 27.189 217 135 7 9 213 68 273 4.14e-13 71.6
MS.gene015777.t1 AT4G24400 27.381 252 131 9 7 236 7 228 1.42e-11 66.6
MS.gene015777.t1 AT4G24400 27.381 252 131 9 7 236 7 228 1.94e-11 65.9
MS.gene015777.t1 AT3G23000 28.182 220 137 8 3 213 19 226 2.11e-11 65.9
MS.gene015777.t1 AT3G10540 27.542 236 156 8 9 236 45 273 4.74e-11 65.1
MS.gene015777.t1 AT4G13020 28.261 184 118 4 5 180 8 185 4.97e-11 64.7
MS.gene015777.t1 AT4G13020 28.261 184 118 4 5 180 8 185 4.98e-11 64.7
MS.gene015777.t1 AT4G13020 28.723 188 115 5 1 180 1 177 5.23e-11 64.7
MS.gene015777.t1 AT4G13020 28.723 188 115 5 1 180 1 177 5.28e-11 64.7
MS.gene015777.t1 AT3G49370 29.412 221 132 9 7 215 140 348 5.99e-11 64.7
MS.gene015777.t1 AT4G13020 28.723 188 115 5 1 180 1 177 6.03e-11 64.3
MS.gene015777.t1 AT4G13020 28.723 188 115 5 1 180 1 177 6.23e-11 64.3
MS.gene015777.t1 AT1G51660 26.772 254 155 9 12 255 82 314 6.31e-11 63.9
MS.gene015777.t1 AT2G46700 25.571 219 141 6 6 213 140 347 7.03e-11 64.7
MS.gene015777.t1 AT2G41860 28.436 211 135 6 9 213 54 254 9.82e-11 63.9

Find 106 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAGACAAGGCAAGGTTTA+AGG 0.159140 4.3:-2392642 None:intergenic
CTTGGTGCAGGTGGCATTCC+AGG 0.196530 4.3:+2389762 MS.gene015777:intron
CAGGTTTACATAATTGATTT+TGG 0.206036 4.3:+2390348 MS.gene015777:intron
GCCTTCCTTGGCAAGGTCTA+AGG 0.233807 4.3:+2390901 MS.gene015777:intron
TTTGATCAGCGGCCTGATTA+TGG 0.242360 4.3:+2391148 MS.gene015777:CDS
CATGGGCAAGCCAGTAAAAT+TGG 0.281681 4.3:+2392683 MS.gene015777:CDS
AGGGAGAACAAAAGCTTAAC+AGG 0.296533 4.3:+2390569 MS.gene015777:intron
TCAGGAAATGCTACTGGTTC+TGG 0.311321 4.3:+2392359 MS.gene015777:CDS
GTGGCATTCCAGGCTTAAAA+TGG 0.316285 4.3:+2389772 MS.gene015777:CDS
TCTTTACCACAGCCAGTTCC+TGG 0.326468 4.3:+2391974 MS.gene015777:intron
GTACTTCTGTACTTCCTTAG+AGG 0.327253 4.3:+2390756 MS.gene015777:CDS
CTCCTGCTGGTACTTCAAAA+AGG 0.340286 4.3:+2392615 MS.gene015777:CDS
TAAAATGGTTTGGCATAGAT+AGG 0.351034 4.3:+2389787 MS.gene015777:CDS
GCAAAGTAGACGGGATGATT+TGG 0.359030 4.3:+2390719 MS.gene015777:CDS
TACCATGCTTGACATTCATT+TGG 0.370830 4.3:-2392750 None:intergenic
GAATGCCATACCTTCCTCTA+AGG 0.375079 4.3:-2390770 None:intergenic
GCAAGTTGCAATACTCATCT+TGG 0.379672 4.3:+2390605 MS.gene015777:CDS
TGATTGCTGATACTTTAAAA+TGG 0.383962 4.3:-2391789 None:intergenic
GCAGACAAGGCAAGGTTTAA+GGG 0.391099 4.3:-2392641 None:intergenic
CGGTTACTTGCACCAGGAAC+TGG 0.392308 4.3:-2391986 None:intergenic
GTGCTTGCTATCGATTTACT+TGG 0.395396 4.3:+2389819 MS.gene015777:CDS
CGCTTCAAGAATCCATAATC+AGG 0.403903 4.3:-2391160 None:intergenic
ATTCCAGGCTTAAAATGGTT+TGG 0.408195 4.3:+2389777 MS.gene015777:CDS
CCAATCGCCACATCCCTTAC+AGG 0.410603 4.3:+2390400 MS.gene015777:CDS
AGGGATGTGGCGATTGGTTG+TGG 0.418253 4.3:-2390394 None:intergenic
GATGACATCCAGCTACTTGA+AGG 0.432963 4.3:-2392707 None:intergenic
TGGGCTAGCAAAACGGTATC+GGG 0.438977 4.3:+2390368 MS.gene015777:CDS
AAGTCCCATGAGGAAGTTAT+CGG 0.450800 4.3:-2390083 None:intergenic
TGCAATACTCATCTTGGGAT+TGG 0.451960 4.3:+2390611 MS.gene015777:CDS
CAAGTTGCAATACTCATCTT+GGG 0.453718 4.3:+2390606 MS.gene015777:CDS
AAGTATGAAGCAAACTCTAC+TGG 0.459456 4.3:-2391103 None:intergenic
AAGCTCTACAATATTCTTCA+AGG 0.460096 4.3:+2389648 MS.gene015777:CDS
GAACCTTCCAACACTGGACA+TGG 0.461334 4.3:+2392665 MS.gene015777:CDS
AATCACCTTCACGAGCAAAT+AGG 0.462598 4.3:-2391195 None:intergenic
CCTTCCTTGGCAAGGTCTAA+GGG 0.464110 4.3:+2390902 MS.gene015777:CDS
TTGGGCTAGCAAAACGGTAT+CGG 0.464581 4.3:+2390367 MS.gene015777:CDS
ATTGAATATGTGCATTCTAA+AGG 0.468242 4.3:+2390037 MS.gene015777:CDS
TTCATGCATATTCAGGGCAT+GGG 0.474995 4.3:+2392321 MS.gene015777:intron
TCTGCTTCTTATGCTCCTGC+TGG 0.479546 4.3:+2392602 MS.gene015777:CDS
ATCAAATATACTCACAGATA+AGG 0.481086 4.3:-2391834 None:intergenic
TTGAAGAATATTGTAGAGCT+TGG 0.482642 4.3:-2389646 None:intergenic
GTCAGAACTCAAGTTTCTAC+CGG 0.488889 4.3:-2392408 None:intergenic
AAATTGGACCTTCAAGTAGC+TGG 0.490531 4.3:+2392699 MS.gene015777:CDS
TACAAGCTTGGCCGCAAGAT+CGG 0.497439 4.3:+2389271 MS.gene015777:CDS
TTGTTTAGCCTTCCTTGGCA+AGG 0.498778 4.3:+2390894 MS.gene015777:intron
TGCCCATGTCCAGTGTTGGA+AGG 0.501193 4.3:-2392668 None:intergenic
CTTGGCCGCAAGATCGGAAG+TGG 0.502438 4.3:+2389277 MS.gene015777:CDS
TGCTTGCTATCGATTTACTT+GGG 0.508590 4.3:+2389820 MS.gene015777:CDS
ATGTCAATGAGTGGCAGTAA+TGG 0.510047 4.3:-2391126 None:intergenic
GGGGAAGAGCGAATTAGATC+AGG 0.520235 4.3:+2392341 MS.gene015777:CDS
ACACTGTAGAACTACCTGTA+AGG 0.520596 4.3:-2390414 None:intergenic
AACATGGAGCGCATCGTTGG+CGG 0.520716 4.3:+2389244 None:intergenic
CCCTTAGACCTTGCCAAGGA+AGG 0.522544 4.3:-2390902 None:intergenic
ATTCTAAAGGATATTTGCAT+AGG 0.523357 4.3:+2390050 MS.gene015777:CDS
CAAAACATGGAGCGCATCGT+TGG 0.523862 4.3:+2389241 None:intergenic
GAACTCAAGTTTCTACCGGC+TGG 0.525103 4.3:-2392404 None:intergenic
AAGATCGGAAGTGGATCCTT+CGG 0.526716 4.3:+2389286 MS.gene015777:CDS
ACTTGGTCGGAAGGCCAACC+AGG 0.527701 4.3:+2390102 MS.gene015777:CDS
ATTAGATCAGGAAATGCTAC+TGG 0.537963 4.3:+2392353 MS.gene015777:CDS
GATAACTTCCTCATGGGACT+TGG 0.538752 4.3:+2390085 MS.gene015777:CDS
GTTGGCGGCAGCTACAAGCT+TGG 0.539526 4.3:+2389259 MS.gene015777:CDS
GGCTTGCCCATGTCCAGTGT+TGG 0.544697 4.3:-2392672 None:intergenic
GCTTAAATACTGACCTCGAT+AGG 0.544757 4.3:-2390978 None:intergenic
TTCTAAAGGATATTTGCATA+GGG 0.547650 4.3:+2390051 MS.gene015777:CDS
ATGGATGTTGACAATCATCA+AGG 0.547757 4.3:+2392022 MS.gene015777:CDS
AAAATGGTTTGGCATAGATA+GGG 0.551435 4.3:+2389788 MS.gene015777:CDS
GTTAATGTTAGCTGATCAAA+TGG 0.552458 4.3:+2389899 MS.gene015777:CDS
AAGGTTCAGCAGACAAGGCA+AGG 0.552755 4.3:-2392649 None:intergenic
TCTGCTGAACCTTCCAACAC+TGG 0.553667 4.3:+2392659 MS.gene015777:CDS
CCTCATGGGACTTGGTCGGA+AGG 0.562643 4.3:+2390093 MS.gene015777:CDS
CAGACAAGGCAAGGTTTAAG+GGG 0.566654 4.3:-2392640 None:intergenic
TTCTGTACTTCCTTAGAGGA+AGG 0.567077 4.3:+2390760 MS.gene015777:CDS
CACTGTAGAACTACCTGTAA+GGG 0.569854 4.3:-2390413 None:intergenic
AGTCCCATGAGGAAGTTATC+GGG 0.570424 4.3:-2390082 None:intergenic
CGGGATGATTTGGAATCACT+AGG 0.571323 4.3:+2390729 MS.gene015777:CDS
TAAACCCGATAACTTCCTCA+TGG 0.571460 4.3:+2390078 MS.gene015777:CDS
AGAGACCTATTTGCTCGTGA+AGG 0.573148 4.3:+2391190 MS.gene015777:CDS
GTTGGAAGGTTCAGCAGACA+AGG 0.573265 4.3:-2392654 None:intergenic
TAACCGTCATGCAGTAGCAA+TGG 0.576648 4.3:+2392003 MS.gene015777:CDS
AAACCCGATAACTTCCTCAT+GGG 0.582601 4.3:+2390079 MS.gene015777:CDS
TTTGACGGCGACGATTTCGA+AGG 0.585931 4.3:-2389431 None:intergenic
AACCTTCCAACACTGGACAT+GGG 0.589719 4.3:+2392666 MS.gene015777:CDS
AGGATCCACTTCCGATCTTG+CGG 0.593120 4.3:-2389282 None:intergenic
CCTGTAAGGGATGTGGCGAT+TGG 0.601182 4.3:-2390400 None:intergenic
ATGGTTTGGCATAGATAGGG+AGG 0.602024 4.3:+2389791 MS.gene015777:CDS
AGCAGGAGCATAAGAAGCAG+AGG 0.604520 4.3:-2392600 None:intergenic
AGAACTACCTGTAAGGGATG+TGG 0.605784 4.3:-2390407 None:intergenic
TAATAAGACAGTTACCTGGT+TGG 0.606730 4.3:-2390116 None:intergenic
AATATACTCACAGATAAGGA+AGG 0.613072 4.3:-2391830 None:intergenic
GCATGACGGTTACTTGCACC+AGG 0.618520 4.3:-2391992 None:intergenic
TCCTTCGGTGAAATTTACCT+CGG 0.620087 4.3:+2389301 MS.gene015777:CDS
GTTCAGTTCAAATCACCAGC+CGG 0.624880 4.3:+2392389 MS.gene015777:CDS
TCATGCATATTCAGGGCATG+GGG 0.625170 4.3:+2392322 MS.gene015777:intron
ACTCATTGACATTTGATCAG+CGG 0.629606 4.3:+2391137 MS.gene015777:CDS
ACCGAGGTAAATTTCACCGA+AGG 0.633578 4.3:-2389302 None:intergenic
ACTTCCTCATGGGACTTGGT+CGG 0.634675 4.3:+2390089 MS.gene015777:CDS
TGTCTTACATTCTTGTCACG+AGG 0.637274 4.3:-2392434 None:intergenic
GCATCCACAGTTGCTTTACG+AGG 0.642435 4.3:+2389623 MS.gene015777:CDS
GCAGCCCTTAGACCTTGCCA+AGG 0.650628 4.3:-2390906 None:intergenic
CTCTACAATATTCTTCAAGG+AGG 0.657190 4.3:+2389651 MS.gene015777:CDS
GCTGATCAAATGTCAATGAG+TGG 0.657329 4.3:-2391135 None:intergenic
CATCCATTGCTACTGCATGA+CGG 0.662544 4.3:-2392006 None:intergenic
GAAGGTATCGACTCCTATCG+AGG 0.668216 4.3:+2390965 MS.gene015777:CDS
GGGAGAACAAAAGCTTAACA+GGG 0.678093 4.3:+2390570 MS.gene015777:intron
TTGGCCTCGTAAAGCAACTG+TGG 0.692532 4.3:-2389627 None:intergenic
CCTTCCGACCAAGTCCCATG+AGG 0.721487 4.3:-2390093 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATAATATTAAAAGTAAAAT+TGG - chr4.3:2389510-2389529 None:intergenic 10.0%
!! ATAAAAGAATGAAACAAAAA+TGG - chr4.3:2390440-2390459 None:intergenic 15.0%
!! TACCCATATAATTAAAAATT+TGG - chr4.3:2391456-2391475 None:intergenic 15.0%
!!! TGCCAAATTTTTAATTATAT+GGG + chr4.3:2391451-2391470 MS.gene015777:intron 15.0%
!!! TTTAGTAATTATTCTCTTTT+TGG + chr4.3:2392552-2392571 MS.gene015777:intron 15.0%
!! TTTAATATTATCAGAAGCAA+GGG - chr4.3:2391950-2391969 None:intergenic 20.0%
!!! AATTATTTTAAACACATGCA+TGG + chr4.3:2391664-2391683 MS.gene015777:intron 20.0%
!!! AATTTGATTTCGTTTTTGAT+TGG + chr4.3:2391765-2391784 MS.gene015777:CDS 20.0%
!!! AGGTTTACATAATTGATTTT+GGG + chr4.3:2390349-2390368 MS.gene015777:intron 20.0%
!!! AGTTATTTTACTTTATTCAG+GGG - chr4.3:2391033-2391052 None:intergenic 20.0%
!!! CAGTTATTTTACTTTATTCA+GGG - chr4.3:2391034-2391053 None:intergenic 20.0%
!!! CTGCCAAATTTTTAATTATA+TGG + chr4.3:2391450-2391469 MS.gene015777:intron 20.0%
!!! GGTATAAAATGTTTTGATTT+TGG + chr4.3:2391472-2391491 MS.gene015777:intron 20.0%
!!! TTCTATCATAAACCATATTT+TGG + chr4.3:2390294-2390313 MS.gene015777:intron 20.0%
!!! TTTAAGGAATAGTATTTTAG+AGG + chr4.3:2391521-2391540 MS.gene015777:intron 20.0%
!!! TTTTAATATTATCAGAAGCA+AGG - chr4.3:2391951-2391970 None:intergenic 20.0%
! AAACATTTATTCAAGCTGAA+AGG - chr4.3:2390665-2390684 None:intergenic 25.0%
! ACTAACAAATATATCCTACA+GGG + chr4.3:2390550-2390569 MS.gene015777:intron 25.0%
! ATACATAAAGGAAAAACAGA+GGG - chr4.3:2391734-2391753 None:intergenic 25.0%
! ATCAAATATACTCACAGATA+AGG - chr4.3:2391837-2391856 None:intergenic 25.0%
! ATTGAATATGTGCATTCTAA+AGG + chr4.3:2390037-2390056 MS.gene015777:CDS 25.0%
! CCTGAATAAAGTAAAATAAC+TGG + chr4.3:2391032-2391051 MS.gene015777:intron 25.0%
! TGAAAAAATATGTCAGAAGA+AGG + chr4.3:2390947-2390966 MS.gene015777:CDS 25.0%
! TTATGAATTGGACCAAAATA+TGG - chr4.3:2390309-2390328 None:intergenic 25.0%
! TTTGTTAGTCACAAAAACTA+AGG - chr4.3:2390539-2390558 None:intergenic 25.0%
!! AAGATTTTCATGCATATTCA+GGG + chr4.3:2392315-2392334 MS.gene015777:intron 25.0%
!! ATTCTAAAGGATATTTGCAT+AGG + chr4.3:2390050-2390069 MS.gene015777:CDS 25.0%
!! TGATTGCTGATACTTTAAAA+TGG - chr4.3:2391792-2391811 None:intergenic 25.0%
!! TTCTAAAGGATATTTGCATA+GGG + chr4.3:2390051-2390070 MS.gene015777:CDS 25.0%
!!! ATCTTTTTGTTTATTGTGGA+AGG + chr4.3:2389856-2389875 MS.gene015777:CDS 25.0%
!!! CAGGTTTACATAATTGATTT+TGG + chr4.3:2390348-2390367 MS.gene015777:intron 25.0%
!!! CCAGTTATTTTACTTTATTC+AGG - chr4.3:2391035-2391054 None:intergenic 25.0%
!!! CTACTTGTTGCTATTTATTA+TGG + chr4.3:2390171-2390190 MS.gene015777:intron 25.0%
!!! GAAGATCTTTTTGTTTATTG+TGG + chr4.3:2389852-2389871 MS.gene015777:CDS 25.0%
!!! GTTATTTTACTTTATTCAGG+GGG - chr4.3:2391032-2391051 None:intergenic 25.0%
!!! GTTGTTTTTGTATTGTTCTA+AGG + chr4.3:2389700-2389719 MS.gene015777:intron 25.0%
!!! TTATTTTACTTTATTCAGGG+GGG - chr4.3:2391031-2391050 None:intergenic 25.0%
!!! TTCCTTGTCATTTATTTTGT+GGG + chr4.3:2391887-2391906 MS.gene015777:intron 25.0%
!!! TTCTCTTTTTGGTAGATTTT+TGG + chr4.3:2392563-2392582 MS.gene015777:intron 25.0%
!!! TTTTTTTAGAGCAAAGTAGA+CGG + chr4.3:2390709-2390728 MS.gene015777:intron 25.0%
!!! TTTTTTTTTCCCTTTCCAAA+AGG + chr4.3:2391063-2391082 MS.gene015777:intron 25.0%
AAGCTCTACAATATTCTTCA+AGG + chr4.3:2389648-2389667 MS.gene015777:CDS 30.0%
AATATACTCACAGATAAGGA+AGG - chr4.3:2391833-2391852 None:intergenic 30.0%
ACAAAAAGATCTTCAAGACT+AGG - chr4.3:2389846-2389865 None:intergenic 30.0%
ATTATTGTCTTGAGAAACAG+CGG - chr4.3:2390835-2390854 None:intergenic 30.0%
CAAATTAGAGAGTGAGTATT+AGG - chr4.3:2389481-2389500 None:intergenic 30.0%
CAAGAAGTAATAATGTCTGT+TGG + chr4.3:2392103-2392122 MS.gene015777:intron 30.0%
CACAAAATAAATGACAAGGA+AGG - chr4.3:2391888-2391907 None:intergenic 30.0%
CAGCACATAGATTTATGAAT+TGG - chr4.3:2390321-2390340 None:intergenic 30.0%
CATACATAAAGGAAAAACAG+AGG - chr4.3:2391735-2391754 None:intergenic 30.0%
CCTTAAATTTAGCCAATCAT+AGG - chr4.3:2391508-2391527 None:intergenic 30.0%
GACTAACAAATATATCCTAC+AGG + chr4.3:2390549-2390568 MS.gene015777:intron 30.0%
GCAAAAGCAATCAAATGATA+TGG - chr4.3:2391258-2391277 None:intergenic 30.0%
GCTAGAAAAAGTCATTGTAA+AGG + chr4.3:2392128-2392147 MS.gene015777:intron 30.0%
GTTAATGTTAGCTGATCAAA+TGG + chr4.3:2389899-2389918 MS.gene015777:CDS 30.0%
GTTGTGAATGAAAAGAAGAA+CGG - chr4.3:2389344-2389363 None:intergenic 30.0%
TAAATTCAATGTTGCATCAC+AGG - chr4.3:2392484-2392503 None:intergenic 30.0%
TATCCTTCTTGATTTCAAAG+AGG + chr4.3:2391554-2391573 MS.gene015777:intron 30.0%
TGCATGAAAATCTTCCAATT+AGG - chr4.3:2392309-2392328 None:intergenic 30.0%
TGGTTTATGATAGAACTGTA+TGG - chr4.3:2390289-2390308 None:intergenic 30.0%
TTACATTGCTAATTCGTTAC+AGG + chr4.3:2389584-2389603 MS.gene015777:intron 30.0%
TTGAAGAATATTGTAGAGCT+TGG - chr4.3:2389649-2389668 None:intergenic 30.0%
! AAAATGGTTTGGCATAGATA+GGG + chr4.3:2389788-2389807 MS.gene015777:CDS 30.0%
! AGCAATGTAACGTTAAGTTT+TGG - chr4.3:2389574-2389593 None:intergenic 30.0%
! ATGTCTAAAACTGAGTAGAT+CGG + chr4.3:2392527-2392546 MS.gene015777:intron 30.0%
! CCTATGATTGGCTAAATTTA+AGG + chr4.3:2391505-2391524 MS.gene015777:intron 30.0%
! GAAGATTTTCATGCATATTC+AGG + chr4.3:2392314-2392333 MS.gene015777:intron 30.0%
! GTTTTTCCTTTATGTATGTC+AGG + chr4.3:2391737-2391756 MS.gene015777:intron 30.0%
! TAAAATGGTTTGGCATAGAT+AGG + chr4.3:2389787-2389806 MS.gene015777:CDS 30.0%
!! AATGTAACGTTAAGTTTTGG+TGG - chr4.3:2389571-2389590 None:intergenic 30.0%
!! CTTGTTTGTTATGACCTAAT+TGG + chr4.3:2392292-2392311 MS.gene015777:intron 30.0%
!! GATTTTTGGAGAAGCAAATA+TGG + chr4.3:2392577-2392596 MS.gene015777:intron 30.0%
!! TATTTTTGTTTAGCCTTCCT+TGG + chr4.3:2390889-2390908 MS.gene015777:intron 30.0%
!! TGCTTTTGCAATTGTTTCTT+GGG + chr4.3:2391269-2391288 MS.gene015777:intron 30.0%
!! TTGCTTTTGCAATTGTTTCT+TGG + chr4.3:2391268-2391287 MS.gene015777:intron 30.0%
!!! CTTCCTTGTCATTTATTTTG+TGG + chr4.3:2391886-2391905 MS.gene015777:intron 30.0%
!!! GTTTTTGTATTGTTCTAAGG+AGG + chr4.3:2389703-2389722 MS.gene015777:intron 30.0%
!!! TTTTTTAGAGCAAAGTAGAC+GGG + chr4.3:2390710-2390729 MS.gene015777:intron 30.0%
AAGTATGAAGCAAACTCTAC+TGG - chr4.3:2391106-2391125 None:intergenic 35.0%
AAGTTAGCAAGGTATACCTT+CGG - chr4.3:2391345-2391364 None:intergenic 35.0%
ACATCTGCGAAATAATGAGT+AGG + chr4.3:2391365-2391384 MS.gene015777:intron 35.0%
ACTCATTGACATTTGATCAG+CGG + chr4.3:2391137-2391156 MS.gene015777:CDS 35.0%
ATACTTCAGGAAAGATCATG+TGG - chr4.3:2390800-2390819 None:intergenic 35.0%
ATGGATGTTGACAATCATCA+AGG + chr4.3:2392022-2392041 MS.gene015777:CDS 35.0%
ATTAGATCAGGAAATGCTAC+TGG + chr4.3:2392353-2392372 MS.gene015777:CDS 35.0%
ATTCCAGGCTTAAAATGGTT+TGG + chr4.3:2389777-2389796 MS.gene015777:CDS 35.0%
CAAGTTGCAATACTCATCTT+GGG + chr4.3:2390606-2390625 MS.gene015777:CDS 35.0%
CAGGAAGAGTGAGTTTATTA+AGG - chr4.3:2392465-2392484 None:intergenic 35.0%
CTCTACAATATTCTTCAAGG+AGG + chr4.3:2389651-2389670 MS.gene015777:CDS 35.0%
GCAATAATAAGACAGTTACC+TGG - chr4.3:2390123-2390142 None:intergenic 35.0%
GGGAGAGGAAAAGTTATATT+TGG - chr4.3:2391714-2391733 None:intergenic 35.0%
GGTAACTGAAAACCTATGAT+TGG + chr4.3:2391493-2391512 MS.gene015777:intron 35.0%
GTCCCACAAAATAAATGACA+AGG - chr4.3:2391892-2391911 None:intergenic 35.0%
GTTAGTCACAAAAACTAAGG+AGG - chr4.3:2390536-2390555 None:intergenic 35.0%
TAATAAGACAGTTACCTGGT+TGG - chr4.3:2390119-2390138 None:intergenic 35.0%
TCATAGCCTGACATACATAA+AGG - chr4.3:2391746-2391765 None:intergenic 35.0%
TTATTGTCTTGAGAAACAGC+GGG - chr4.3:2390834-2390853 None:intergenic 35.0%
TTGATTTCAAAGAGGTCATG+TGG + chr4.3:2391562-2391581 MS.gene015777:intron 35.0%
TTGTGTGCAGTGTCTTAAAT+AGG + chr4.3:2392046-2392065 MS.gene015777:intron 35.0%
! ACTTGAAGGTCCAATTTTAC+TGG - chr4.3:2392696-2392715 None:intergenic 35.0%
! AGTCCTCATTTTCTCAAGAA+TGG + chr4.3:2391615-2391634 MS.gene015777:intron 35.0%
! GAGATTTGCATAGTACCTTT+TGG - chr4.3:2391081-2391100 None:intergenic 35.0%
! GCAGAAACTTACGATTTTGA+CGG - chr4.3:2389449-2389468 None:intergenic 35.0%
! GTCCTCATTTTCTCAAGAAT+GGG + chr4.3:2391616-2391635 MS.gene015777:intron 35.0%
! GTTTGAGATTTCGTGTTTCT+TGG + chr4.3:2389744-2389763 MS.gene015777:intron 35.0%
! TCCTCATTTTCTCAAGAATG+GGG + chr4.3:2391617-2391636 MS.gene015777:intron 35.0%
!! CTTTTGCAATTGTTTCTTGG+GGG + chr4.3:2391271-2391290 MS.gene015777:intron 35.0%
!! GCTTTTGCAATTGTTTCTTG+GGG + chr4.3:2391270-2391289 MS.gene015777:intron 35.0%
!! GGTTCTGGAAAAAATACTTC+AGG - chr4.3:2390813-2390832 None:intergenic 35.0%
!! TGACCTCTTTGAAATCAAGA+AGG - chr4.3:2391560-2391579 None:intergenic 35.0%
!! TGCATAGTACCTTTTGGAAA+GGG - chr4.3:2391075-2391094 None:intergenic 35.0%
!! TGCTTGCTATCGATTTACTT+GGG + chr4.3:2389820-2389839 MS.gene015777:CDS 35.0%
!! TTGCATAGTACCTTTTGGAA+AGG - chr4.3:2391076-2391095 None:intergenic 35.0%
!!! ATCTATGTGCTGTTTTTGTC+AGG + chr4.3:2390329-2390348 MS.gene015777:intron 35.0%
!!! ATTTATTTTGTGGGACTGAG+GGG + chr4.3:2391896-2391915 MS.gene015777:intron 35.0%
!!! CATTTATTTTGTGGGACTGA+GGG + chr4.3:2391895-2391914 MS.gene015777:intron 35.0%
!!! TCATTTATTTTGTGGGACTG+AGG + chr4.3:2391894-2391913 MS.gene015777:intron 35.0%
!!! TTGATTTTGGGCTAGCAAAA+CGG + chr4.3:2390361-2390380 MS.gene015777:CDS 35.0%
AAAAGAAGAACGGAAGAGAG+AGG - chr4.3:2389334-2389353 None:intergenic 40.0%
AAACCCGATAACTTCCTCAT+GGG + chr4.3:2390079-2390098 MS.gene015777:CDS 40.0%
AAATTGGACCTTCAAGTAGC+TGG + chr4.3:2392699-2392718 MS.gene015777:CDS 40.0%
AAGTCCCATGAGGAAGTTAT+CGG - chr4.3:2390086-2390105 None:intergenic 40.0%
AATCACCTTCACGAGCAAAT+AGG - chr4.3:2391198-2391217 None:intergenic 40.0%
AATTTGTCGAATACACCCGA+AGG + chr4.3:2391326-2391345 MS.gene015777:intron 40.0%
ACACTGTAGAACTACCTGTA+AGG - chr4.3:2390417-2390436 None:intergenic 40.0%
AGACAGGACTAAGACACAAA+AGG - chr4.3:2392203-2392222 None:intergenic 40.0%
AGCAACAAGTAGTTGACTGA+CGG - chr4.3:2390163-2390182 None:intergenic 40.0%
AGGGAGAACAAAAGCTTAAC+AGG + chr4.3:2390569-2390588 MS.gene015777:intron 40.0%
AGTAAGCAAGTTACGTCTTC+AGG - chr4.3:2391427-2391446 None:intergenic 40.0%
AGTCACAAAAACTAAGGAGG+TGG - chr4.3:2390533-2390552 None:intergenic 40.0%
AGTTAGCAAGGTATACCTTC+GGG - chr4.3:2391344-2391363 None:intergenic 40.0%
ATGTCAATGAGTGGCAGTAA+TGG - chr4.3:2391129-2391148 None:intergenic 40.0%
CACTGTAGAACTACCTGTAA+GGG - chr4.3:2390416-2390435 None:intergenic 40.0%
CGCTTCAAGAATCCATAATC+AGG - chr4.3:2391163-2391182 None:intergenic 40.0%
CTTAGTCCTGTCTTAGAAGA+TGG + chr4.3:2392210-2392229 MS.gene015777:intron 40.0%
GACATTGAGGAGGTTAGATT+AGG + chr4.3:2391589-2391608 MS.gene015777:intron 40.0%
GCAAGTTGCAATACTCATCT+TGG + chr4.3:2390605-2390624 MS.gene015777:CDS 40.0%
GCTGATCAAATGTCAATGAG+TGG - chr4.3:2391138-2391157 None:intergenic 40.0%
GCTTAAATACTGACCTCGAT+AGG - chr4.3:2390981-2391000 None:intergenic 40.0%
GGGAGAACAAAAGCTTAACA+GGG + chr4.3:2390570-2390589 MS.gene015777:intron 40.0%
GTACTTCTGTACTTCCTTAG+AGG + chr4.3:2390756-2390775 MS.gene015777:CDS 40.0%
GTCACAAAAACTAAGGAGGT+GGG - chr4.3:2390532-2390551 None:intergenic 40.0%
GTCAGAACTCAAGTTTCTAC+CGG - chr4.3:2392411-2392430 None:intergenic 40.0%
TAAACCCGATAACTTCCTCA+TGG + chr4.3:2390078-2390097 MS.gene015777:CDS 40.0%
TAAAGGAAAAACAGAGGGAG+AGG - chr4.3:2391729-2391748 None:intergenic 40.0%
TACTTCCTTAGAGGAAGGTA+TGG + chr4.3:2390765-2390784 MS.gene015777:intron 40.0%
TCACAAAAACTAAGGAGGTG+GGG - chr4.3:2390531-2390550 None:intergenic 40.0%
TCCCCATTCTTGAGAAAATG+AGG - chr4.3:2391621-2391640 None:intergenic 40.0%
TCCTTCGGTGAAATTTACCT+CGG + chr4.3:2389301-2389320 MS.gene015777:CDS 40.0%
TGCAATACTCATCTTGGGAT+TGG + chr4.3:2390611-2390630 MS.gene015777:CDS 40.0%
TGTCTTACATTCTTGTCACG+AGG - chr4.3:2392437-2392456 None:intergenic 40.0%
TTCATGCATATTCAGGGCAT+GGG + chr4.3:2392321-2392340 MS.gene015777:intron 40.0%
TTCGCAGATGTAAGTTAGCA+AGG - chr4.3:2391356-2391375 None:intergenic 40.0%
TTCTGTACTTCCTTAGAGGA+AGG + chr4.3:2390760-2390779 MS.gene015777:CDS 40.0%
TTTACTTTATTCAGGGGGGA+GGG - chr4.3:2391027-2391046 None:intergenic 40.0%
TTTCATGCATATTCAGGGCA+TGG + chr4.3:2392320-2392339 MS.gene015777:intron 40.0%
! ATGCCAAACCATTTTAAGCC+TGG - chr4.3:2389783-2389802 None:intergenic 40.0%
! ATTTGGTACCGAAGATCAGA+GGG - chr4.3:2391697-2391716 None:intergenic 40.0%
! GTTTTTCTCCCTCTGATCTT+CGG + chr4.3:2391686-2391705 MS.gene015777:intron 40.0%
! TAAGCTTTTGTTCTCCCTGT+AGG - chr4.3:2390567-2390586 None:intergenic 40.0%
! TATTTGGTACCGAAGATCAG+AGG - chr4.3:2391698-2391717 None:intergenic 40.0%
! TTTTACTTTATTCAGGGGGG+AGG - chr4.3:2391028-2391047 None:intergenic 40.0%
!! AAGCCTTATTCCACTAAGTG+GGG + chr4.3:2390240-2390259 MS.gene015777:intron 40.0%
!! CAAGCCTTATTCCACTAAGT+GGG + chr4.3:2390239-2390258 MS.gene015777:intron 40.0%
!! GTATTGTTCTAAGGAGGTAG+TGG + chr4.3:2389709-2389728 MS.gene015777:intron 40.0%
!! GTGCTTGCTATCGATTTACT+TGG + chr4.3:2389819-2389838 MS.gene015777:CDS 40.0%
!! TTCCATCCATCTTCTAAGAC+AGG - chr4.3:2392219-2392238 None:intergenic 40.0%
!!! AGTTTTGTTGACAACCTGCA+AGG + chr4.3:2392162-2392181 MS.gene015777:intron 40.0%
!!! TTCCTTTTTGAAGTACCAGC+AGG - chr4.3:2392620-2392639 None:intergenic 40.0%
AACCTTCCAACACTGGACAT+GGG + chr4.3:2392666-2392685 MS.gene015777:CDS 45.0%
AAGATCGGAAGTGGATCCTT+CGG + chr4.3:2389286-2389305 MS.gene015777:CDS 45.0%
ACCGAGGTAAATTTCACCGA+AGG - chr4.3:2389305-2389324 None:intergenic 45.0%
AGAACTACCTGTAAGGGATG+TGG - chr4.3:2390410-2390429 None:intergenic 45.0%
AGAGACCTATTTGCTCGTGA+AGG + chr4.3:2391190-2391209 MS.gene015777:CDS 45.0%
AGCAGACAAGGCAAGGTTTA+AGG - chr4.3:2392645-2392664 None:intergenic 45.0%
AGTCCCATGAGGAAGTTATC+GGG - chr4.3:2390085-2390104 None:intergenic 45.0%
CAGACAAGGCAAGGTTTAAG+GGG - chr4.3:2392643-2392662 None:intergenic 45.0%
CATCCATTGCTACTGCATGA+CGG - chr4.3:2392009-2392028 None:intergenic 45.0%
CATGGGCAAGCCAGTAAAAT+TGG + chr4.3:2392683-2392702 MS.gene015777:CDS 45.0%
CCACTTAGTGGAATAAGGCT+TGG - chr4.3:2390241-2390260 None:intergenic 45.0%
CTCCTGCTGGTACTTCAAAA+AGG + chr4.3:2392615-2392634 MS.gene015777:CDS 45.0%
CTTATTCCACTAAGTGGGGT+CGG + chr4.3:2390244-2390263 MS.gene015777:intron 45.0%
GAATGCCATACCTTCCTCTA+AGG - chr4.3:2390773-2390792 None:intergenic 45.0%
GATAACTTCCTCATGGGACT+TGG + chr4.3:2390085-2390104 MS.gene015777:CDS 45.0%
GATGACATCCAGCTACTTGA+AGG - chr4.3:2392710-2392729 None:intergenic 45.0%
GCAAAGTAGACGGGATGATT+TGG + chr4.3:2390719-2390738 MS.gene015777:CDS 45.0%
GCAACAAGTAGTTGACTGAC+GGG - chr4.3:2390162-2390181 None:intergenic 45.0%
GCAGACAAGGCAAGGTTTAA+GGG - chr4.3:2392644-2392663 None:intergenic 45.0%
GGTATCAATATGCGTAGCTG+CGG - chr4.3:2389413-2389432 None:intergenic 45.0%
GTCCTGTCTTAGAAGATGGA+TGG + chr4.3:2392214-2392233 MS.gene015777:intron 45.0%
GTGGCATTCCAGGCTTAAAA+TGG + chr4.3:2389772-2389791 MS.gene015777:CDS 45.0%
GTTCAGTTCAAATCACCAGC+CGG + chr4.3:2392389-2392408 MS.gene015777:CDS 45.0%
TAACCGTCATGCAGTAGCAA+TGG + chr4.3:2392003-2392022 MS.gene015777:CDS 45.0%
TCATGCATATTCAGGGCATG+GGG + chr4.3:2392322-2392341 MS.gene015777:intron 45.0%
TTACTTTATTCAGGGGGGAG+GGG - chr4.3:2391026-2391045 None:intergenic 45.0%
TTCAAAGAGGTCATGTGGCA+AGG + chr4.3:2391567-2391586 MS.gene015777:intron 45.0%
TTGTTGACAACCTGCAAGGT+TGG + chr4.3:2392166-2392185 MS.gene015777:intron 45.0%
TTTGATCAGCGGCCTGATTA+TGG + chr4.3:2391148-2391167 MS.gene015777:CDS 45.0%
! ATGGTTTGGCATAGATAGGG+AGG + chr4.3:2389791-2389810 MS.gene015777:CDS 45.0%
! CGGGATGATTTGGAATCACT+AGG + chr4.3:2390729-2390748 MS.gene015777:CDS 45.0%
! GATTTCGTGTTTCTTGGTGC+AGG + chr4.3:2389750-2389769 MS.gene015777:intron 45.0%
! TTGTTTAGCCTTCCTTGGCA+AGG + chr4.3:2390894-2390913 MS.gene015777:intron 45.0%
!! CCAAGCCTTATTCCACTAAG+TGG + chr4.3:2390238-2390257 MS.gene015777:intron 45.0%
!! TCAGGAAATGCTACTGGTTC+TGG + chr4.3:2392359-2392378 MS.gene015777:CDS 45.0%
!! TTGGGCTAGCAAAACGGTAT+CGG + chr4.3:2390367-2390386 MS.gene015777:CDS 45.0%
AAGAGAGAGGATAGTCACCG+AGG - chr4.3:2389321-2389340 None:intergenic 50.0%
AAGGTTCAGCAGACAAGGCA+AGG - chr4.3:2392652-2392671 None:intergenic 50.0%
AGGATCCACTTCCGATCTTG+CGG - chr4.3:2389285-2389304 None:intergenic 50.0%
ATGTGGCAAGGACATTGAGG+AGG + chr4.3:2391579-2391598 MS.gene015777:intron 50.0%
CCTTCCTTGGCAAGGTCTAA+GGG + chr4.3:2390902-2390921 MS.gene015777:CDS 50.0%
CGACCCCACTTAGTGGAATA+AGG - chr4.3:2390246-2390265 None:intergenic 50.0%
GAACCTTCCAACACTGGACA+TGG + chr4.3:2392665-2392684 MS.gene015777:CDS 50.0%
GAACTCAAGTTTCTACCGGC+TGG - chr4.3:2392407-2392426 None:intergenic 50.0%
GGGGAAGAGCGAATTAGATC+AGG + chr4.3:2392341-2392360 MS.gene015777:CDS 50.0%
GTCATGTGGCAAGGACATTG+AGG + chr4.3:2391576-2391595 MS.gene015777:intron 50.0%
GTTGGAAGGTTCAGCAGACA+AGG - chr4.3:2392657-2392676 None:intergenic 50.0%
TACAAGCTTGGCCGCAAGAT+CGG + chr4.3:2389271-2389290 MS.gene015777:CDS 50.0%
TACTTTATTCAGGGGGGAGG+GGG - chr4.3:2391025-2391044 None:intergenic 50.0%
TCTGCTGAACCTTCCAACAC+TGG + chr4.3:2392659-2392678 MS.gene015777:CDS 50.0%
TCTGCTTCTTATGCTCCTGC+TGG + chr4.3:2392602-2392621 MS.gene015777:CDS 50.0%
TCTTTACCACAGCCAGTTCC+TGG + chr4.3:2391974-2391993 MS.gene015777:intron 50.0%
TGGGACTGAGGGGTTACTAA+TGG + chr4.3:2391906-2391925 MS.gene015777:intron 50.0%
TTGGCCTCGTAAAGCAACTG+TGG - chr4.3:2389630-2389649 None:intergenic 50.0%
TTTGACGGCGACGATTTCGA+AGG - chr4.3:2389434-2389453 None:intergenic 50.0%
! ACCTGCAAGGTTGGCTGAAT+CGG + chr4.3:2392175-2392194 MS.gene015777:intron 50.0%
! ACTGACGGGCAAGTTCAACT+GGG - chr4.3:2390148-2390167 None:intergenic 50.0%
! ACTTCCTCATGGGACTTGGT+CGG + chr4.3:2390089-2390108 MS.gene015777:CDS 50.0%
! AGCAGGAGCATAAGAAGCAG+AGG - chr4.3:2392603-2392622 None:intergenic 50.0%
! GCAATTGTTTCTTGGGGGCA+TGG + chr4.3:2391276-2391295 MS.gene015777:intron 50.0%
! GCATCCACAGTTGCTTTACG+AGG + chr4.3:2389623-2389642 MS.gene015777:CDS 50.0%
! TCTTGAGAAACAGCGGGTTC+TGG - chr4.3:2390828-2390847 None:intergenic 50.0%
! TTCGTGTTTCTTGGTGCAGG+TGG + chr4.3:2389753-2389772 MS.gene015777:intron 50.0%
!! GAAGGTATCGACTCCTATCG+AGG + chr4.3:2390965-2390984 MS.gene015777:CDS 50.0%
!! TGGGCTAGCAAAACGGTATC+GGG + chr4.3:2390368-2390387 MS.gene015777:CDS 50.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr4.3:2390252-2390271 MS.gene015777:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr4.3:2390253-2390272 None:intergenic 55.0%
CCAATCGCCACATCCCTTAC+AGG + chr4.3:2390400-2390419 MS.gene015777:CDS 55.0%
CCCTTAGACCTTGCCAAGGA+AGG - chr4.3:2390905-2390924 None:intergenic 55.0%
CCTGTAAGGGATGTGGCGAT+TGG - chr4.3:2390403-2390422 None:intergenic 55.0%
CGGTTACTTGCACCAGGAAC+TGG - chr4.3:2391989-2392008 None:intergenic 55.0%
GCATGACGGTTACTTGCACC+AGG - chr4.3:2391995-2392014 None:intergenic 55.0%
GCCTTCCTTGGCAAGGTCTA+AGG + chr4.3:2390901-2390920 MS.gene015777:intron 55.0%
TCCGATTCAGCCAACCTTGC+AGG - chr4.3:2392179-2392198 None:intergenic 55.0%
! AGGGATGTGGCGATTGGTTG+TGG - chr4.3:2390397-2390416 None:intergenic 55.0%
! GACTGACGGGCAAGTTCAAC+TGG - chr4.3:2390149-2390168 None:intergenic 55.0%
! TGCCCATGTCCAGTGTTGGA+AGG - chr4.3:2392671-2392690 None:intergenic 55.0%
ACTTGGTCGGAAGGCCAACC+AGG + chr4.3:2390102-2390121 MS.gene015777:CDS 60.0%
CCTTCCGACCAAGTCCCATG+AGG - chr4.3:2390096-2390115 None:intergenic 60.0%
CTTGCACCAGGAACTGGCTG+TGG - chr4.3:2391983-2392002 None:intergenic 60.0%
CTTGGCCGCAAGATCGGAAG+TGG + chr4.3:2389277-2389296 MS.gene015777:CDS 60.0%
GACGGGCAAGTTCAACTGGG+TGG - chr4.3:2390145-2390164 None:intergenic 60.0%
GCAGCCCTTAGACCTTGCCA+AGG - chr4.3:2390909-2390928 None:intergenic 60.0%
GGCTTGCCCATGTCCAGTGT+TGG - chr4.3:2392675-2392694 None:intergenic 60.0%
GTTGGCGGCAGCTACAAGCT+TGG + chr4.3:2389259-2389278 MS.gene015777:CDS 60.0%
! CCTCATGGGACTTGGTCGGA+AGG + chr4.3:2390093-2390112 MS.gene015777:CDS 60.0%
! CTTGGTGCAGGTGGCATTCC+AGG + chr4.3:2389762-2389781 MS.gene015777:intron 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 2389247 2392757 2389247 ID=MS.gene015777
chr4.3 mRNA 2389247 2392757 2389247 ID=MS.gene015777.t1;Parent=MS.gene015777
chr4.3 exon 2389247 2389322 2389247 ID=MS.gene015777.t1.exon1;Parent=MS.gene015777.t1
chr4.3 CDS 2389247 2389322 2389247 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
chr4.3 exon 2389416 2389456 2389416 ID=MS.gene015777.t1.exon2;Parent=MS.gene015777.t1
chr4.3 CDS 2389416 2389456 2389416 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
chr4.3 exon 2389606 2389675 2389606 ID=MS.gene015777.t1.exon3;Parent=MS.gene015777.t1
chr4.3 CDS 2389606 2389675 2389606 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
chr4.3 exon 2389772 2389920 2389772 ID=MS.gene015777.t1.exon4;Parent=MS.gene015777.t1
chr4.3 CDS 2389772 2389920 2389772 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
chr4.3 exon 2390028 2390123 2390028 ID=MS.gene015777.t1.exon5;Parent=MS.gene015777.t1
chr4.3 CDS 2390028 2390123 2390028 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
chr4.3 exon 2390351 2390421 2390351 ID=MS.gene015777.t1.exon6;Parent=MS.gene015777.t1
chr4.3 CDS 2390351 2390421 2390351 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
chr4.3 exon 2390571 2390632 2390571 ID=MS.gene015777.t1.exon7;Parent=MS.gene015777.t1
chr4.3 CDS 2390571 2390632 2390571 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
chr4.3 exon 2390718 2390781 2390718 ID=MS.gene015777.t1.exon8;Parent=MS.gene015777.t1
chr4.3 CDS 2390718 2390781 2390718 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
chr4.3 exon 2390902 2390986 2390902 ID=MS.gene015777.t1.exon9;Parent=MS.gene015777.t1
chr4.3 CDS 2390902 2390986 2390902 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
chr4.3 exon 2391085 2391211 2391085 ID=MS.gene015777.t1.exon10;Parent=MS.gene015777.t1
chr4.3 CDS 2391085 2391211 2391085 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
chr4.3 exon 2391759 2391841 2391759 ID=MS.gene015777.t1.exon11;Parent=MS.gene015777.t1
chr4.3 CDS 2391759 2391841 2391759 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
chr4.3 exon 2391986 2392043 2391986 ID=MS.gene015777.t1.exon12;Parent=MS.gene015777.t1
chr4.3 CDS 2391986 2392043 2391986 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
chr4.3 exon 2392336 2392448 2392336 ID=MS.gene015777.t1.exon13;Parent=MS.gene015777.t1
chr4.3 CDS 2392336 2392448 2392336 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
chr4.3 exon 2392578 2392757 2392578 ID=MS.gene015777.t1.exon14;Parent=MS.gene015777.t1
chr4.3 CDS 2392578 2392757 2392578 ID=cds.MS.gene015777.t1;Parent=MS.gene015777.t1
Gene Sequence

>MS.gene015777

ATGGAGCGCATCGTTGGCGGCAGCTACAAGCTTGGCCGCAAGATCGGAAGTGGATCCTTCGGTGAAATTTACCTCGGTGACTATCCTCTCTCTTCCGTTCTTCTTTTCATTCACAACGATTCTTTCTTTATTCTTATCACTCTTTTAACGTTTTCATTTCTCTCCGCAGCTACGCATATTGATACCTTCGAAATCGTCGCCGTCAAAATCGTAAGTTTCTGCTACGCTTTTCCTAATACTCACTCTCTAATTTGCATATTCCAATTTTACTTTTAATATTATCATTCAATTATCTATTATTTTGCTAATTTGCTTCTTAATCCACCAAAACTTAACGTTACATTGCTAATTCGTTACAGGAGAATAGTAAAACAAAGCATCCACAGTTGCTTTACGAGGCCAAGCTCTACAATATTCTTCAAGGAGGAAGTATGCATTTTGCAATATTCAGTAGTTGTTTTTGTATTGTTCTAAGGAGGTAGTGGTTAGAGTCATGAGTTTGAGATTTCGTGTTTCTTGGTGCAGGTGGCATTCCAGGCTTAAAATGGTTTGGCATAGATAGGGAGGATAACGTGCTTGCTATCGATTTACTTGGGCCTAGTCTTGAAGATCTTTTTGTTTATTGTGGAAGGAAGTTTTCGTTGAAGACTGTGTTAATGTTAGCTGATCAAATGGTATATGCTTACTGACTTGTATGTTTTTCACAAAACTATATGCTTATTTCATATATTTGATGCTAATTCGTTCAATTTATCTCTTTTTTCATATTTTTTATGTGCAGATCACTAGAATTGAATATGTGCATTCTAAAGGATATTTGCATAGGGATATTAAACCCGATAACTTCCTCATGGGACTTGGTCGGAAGGCCAACCAGGTAACTGTCTTATTATTGCCACCCAGTTGAACTTGCCCGTCAGTCAACTACTTGTTGCTATTTATTATGGTTTCACTTGTGTGTGTAATTTTGTTGTTCTTGTCACAACAACAACCAAGCCTTATTCCACTAAGTGGGGTCGGCTACATGGATCAAATTACACCATACAGTTCTATCATAAACCATATTTTGGTCCAATTCATAAATCTATGTGCTGTTTTTGTCAGGTTTACATAATTGATTTTGGGCTAGCAAAACGGTATCGGGAATCCACAACCAATCGCCACATCCCTTACAGGTAGTTCTACAGTGTCCATTTTTGTTTCATTCTTTTATTTTTGTTTTCATTTTCGACATTTATATCTTGTAAGTTGCATTCATCTAATTATGAATTATTTTCACATCCCCACCTCCTTAGTTTTTGTGACTAACAAATATATCCTACAGGGAGAACAAAAGCTTAACAGGGACTGCTCGATATGCAAGTTGCAATACTCATCTTGGGATTGGTAAGTCTTAAGTTAGAAGAATATATTAACCTTTCAGCTTGAATAAATGTTTACACATTCTCATTCACTATATTTTTTTTTTTAGAGCAAAGTAGACGGGATGATTTGGAATCACTAGGATATGTACTTCTGTACTTCCTTAGAGGAAGGTATGGCATTCTGTTCCACATGATCTTTCCTGAAGTATTTTTTCCAGAACCCGCTGTTTCTCAAGACAATAATGAAATGTCATGACTTATAGTTTTAAATTTGTAACTATTTTTGTTTAGCCTTCCTTGGCAAGGTCTAAGGGCTGCAACAAAGAAACAGAAGTATGAAAAAATATGTCAGAAGAAGGTATCGACTCCTATCGAGGTCAGTATTTAAGCATTTATGTGTGTTGTGAAGCACCCCCTCCCCCCTGAATAAAGTAAAATAACTGGCATACTAATTTTTTTTTCCCTTTCCAAAAGGTACTATGCAAATCTCATCCAGTAGAGTTTGCTTCATACTTCCATTACTGCCACTCATTGACATTTGATCAGCGGCCTGATTATGGATTCTTGAAGCGCTTATTTAGAGACCTATTTGCTCGTGAAGGTGATTGTTTTTCATTTTTCAAATAATATAAAAAACGATTGAACCATATCATTTGATTGCTTTTGCAATTGTTTCTTGGGGGCATGGACATTATTTTCAACTTTTATAACTACAAATTTGTCGAATACACCCGAAGGTATACCTTGCTAACTTACATCTGCGAAATAATGAGTAGGTGTAAGCTAGCAAGTTATAACTAAAAATTTCACACACCTGAAGACGTAACTTGCTTACTTATCTGCCAAATTTTTAATTATATGGGTATAAAATGTTTTGATTTTGGTAACTGAAAACCTATGATTGGCTAAATTTAAGGAATAGTATTTTAGAGGAATAAAAAAATATCCTTCTTGATTTCAAAGAGGTCATGTGGCAAGGACATTGAGGAGGTTAGATTAGGAGAAGTCCTCATTTTCTCAAGAATGGGGACTCAAATTTAATACATAGTTGTTAATTATTTTAAACACATGCATGGTTTTTCTCCCTCTGATCTTCGGTACCAAATATAACTTTTCCTCTCCCTCTGTTTTTCCTTTATGTATGTCAGGCTATGAATTTGATTTCGTTTTTGATTGGACCATTTTAAAGTATCAGCAATCACAGAAGAATTTAGTTCAGCCTTCCTTATCTGTGAGTATATTTGATTTTTAGTCTCTGTGCATACATCTTTGAGCCTTCCTTGTCATTTATTTTGTGGGACTGAGGGGTTACTAATGGTTTTGCAACTTGAATCTTCCCTTGCTTCTGATAATATTAAAATTGTCTTTACCACAGCCAGTTCCTGGTGCAAGTAACCGTCATGCAGTAGCAATGGATGTTGACAATCATCAAGGTTTGTGTGCAGTGTCTTAAATAGGTTATGTGATTTTATAAATTATAGATGTTTCTTATCAAGAAGTAATAATGTCTGTTGGTTGCTAGAAAAAGTCATTGTAAAGGCAACAAAATTAAGTTTTGTTGACAACCTGCAAGGTTGGCTGAATCGGATCCTTTTGTGTCTTAGTCCTGTCTTAGAAGATGGATGGAATGACGTTTAGTTTTCTACTTTATGAATATTATTATTTTTTTAAAACAAAATATCTTGTTTGTTATGACCTAATTGGAAGATTTTCATGCATATTCAGGGCATGGGGAAGAGCGAATTAGATCAGGAAATGCTACTGGTTCTGGTGTTAAAGTTCAGTTCAAATCACCAGCCGGTAGAAACTTGAGTTCTGACAATCCTCGTGACAAGAATGTAAGACATCTTGCCTTAATAAACTCACTCTTCCTGTGATGCAACATTGAATTTACTGTTCAGAGATCACACAACATTATGTCTAAAACTGAGTAGATCGGTATTTAGTAATTATTCTCTTTTTGGTAGATTTTTGGAGAAGCAAATATGGCCTCTGCTTCTTATGCTCCTGCTGGTACTTCAAAAAGGAACCCCTTAAACCTTGCCTTGTCTGCTGAACCTTCCAACACTGGACATGGGCAAGCCAGTAAAATTGGACCTTCAAGTAGCTGGATGTCATCTCTGCAGCGCATATCTTCTTCCAAATGA
Protein sequence

>MS.gene015777.t1

MERIVGGSYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSKTKHPQLLYEAKLYNILQGGSGIPGLKWFGIDREDNVLAIDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGYLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRESTTNRHIPYRENKSLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLRAATKKQKYEKICQKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFAREGYEFDFVFDWTILKYQQSQKNLVQPSLSPVPGASNRHAVAMDVDNHQGHGEERIRSGNATGSGVKVQFKSPAGRNLSSDNPRDKNIFGEANMASASYAPAGTSKRNPLNLALSAEPSNTGHGQASKIGPSSSWMSSLQRISSSK