Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059592.t1 | XP_024641824.1 | 99.3 | 424 | 3 | 0 | 1 | 424 | 1 | 424 | 1.10E-241 | 845.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059592.t1 | Q93Z18 | 70.7 | 423 | 106 | 5 | 1 | 416 | 1 | 412 | 1.8e-168 | 593.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059592.t1 | G7KPU7 | 99.3 | 424 | 3 | 0 | 1 | 424 | 1 | 424 | 7.7e-242 | 845.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059592 | MS.gene06648 | 0.809709 | 1.66E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene059592 | MS.gene047966 | PPI |
| MS.gene059592 | MS.gene00843 | PPI |
| MS.gene059592 | MS.gene066046 | PPI |
| MS.gene059592 | MS.gene051853 | PPI |
| MS.gene01884 | MS.gene059592 | PPI |
| MS.gene059592 | MS.gene015841 | PPI |
| MS.gene059592 | MS.gene05967 | PPI |
| MS.gene20137 | MS.gene059592 | PPI |
| MS.gene67157 | MS.gene059592 | PPI |
| MS.gene063222 | MS.gene059592 | PPI |
| MS.gene059592 | MS.gene05889 | PPI |
| MS.gene059592 | MS.gene002926 | PPI |
| MS.gene049052 | MS.gene059592 | PPI |
| MS.gene059592 | MS.gene66388 | PPI |
| MS.gene059592 | MS.gene053363 | PPI |
| MS.gene059592 | MS.gene049051 | PPI |
| MS.gene059592 | MS.gene004844 | PPI |
| MS.gene059592 | MS.gene025139 | PPI |
| MS.gene57575 | MS.gene059592 | PPI |
| MS.gene061465 | MS.gene059592 | PPI |
| MS.gene059592 | MS.gene063343 | PPI |
| MS.gene059592 | MS.gene75024 | PPI |
| MS.gene049095 | MS.gene059592 | PPI |
| MS.gene015777 | MS.gene059592 | PPI |
| MS.gene012266 | MS.gene059592 | PPI |
| MS.gene04733 | MS.gene059592 | PPI |
| MS.gene059592 | MS.gene65463 | PPI |
| MS.gene030337 | MS.gene059592 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059592.t1 | MTR_6g087070 | 99.292 | 424 | 3 | 0 | 1 | 424 | 1 | 424 | 0.0 | 878 |
| MS.gene059592.t1 | MTR_8g102930 | 79.812 | 426 | 82 | 4 | 1 | 424 | 1 | 424 | 0.0 | 699 |
| MS.gene059592.t1 | MTR_3g110180 | 64.619 | 407 | 132 | 5 | 1 | 398 | 1 | 404 | 0.0 | 524 |
| MS.gene059592.t1 | MTR_3g110180 | 64.619 | 407 | 131 | 6 | 1 | 398 | 1 | 403 | 0.0 | 520 |
| MS.gene059592.t1 | MTR_2g099670 | 63.246 | 419 | 138 | 7 | 1 | 411 | 1 | 411 | 0.0 | 520 |
| MS.gene059592.t1 | MTR_4g126010 | 72.973 | 333 | 89 | 1 | 1 | 333 | 1 | 332 | 0.0 | 520 |
| MS.gene059592.t1 | MTR_1g042280 | 75.625 | 320 | 75 | 2 | 1 | 317 | 2 | 321 | 0.0 | 519 |
| MS.gene059592.t1 | MTR_1g069720 | 76.299 | 308 | 73 | 0 | 1 | 308 | 1 | 308 | 6.85e-179 | 507 |
| MS.gene059592.t1 | MTR_8g018310 | 77.926 | 299 | 65 | 1 | 1 | 299 | 1 | 298 | 9.46e-179 | 507 |
| MS.gene059592.t1 | MTR_8g018310 | 72.644 | 329 | 86 | 3 | 1 | 328 | 1 | 326 | 3.18e-177 | 501 |
| MS.gene059592.t1 | MTR_1g075870 | 72.586 | 321 | 85 | 2 | 1 | 318 | 2 | 322 | 3.73e-177 | 498 |
| MS.gene059592.t1 | MTR_1g004990 | 60.526 | 418 | 149 | 5 | 1 | 411 | 1 | 409 | 4.15e-177 | 501 |
| MS.gene059592.t1 | MTR_1g075870 | 72.586 | 321 | 85 | 2 | 1 | 318 | 2 | 322 | 1.47e-176 | 501 |
| MS.gene059592.t1 | MTR_7g097160 | 76.094 | 297 | 71 | 0 | 1 | 297 | 1 | 297 | 1.38e-174 | 496 |
| MS.gene059592.t1 | MTR_2g039930 | 73.579 | 299 | 79 | 0 | 1 | 299 | 1 | 299 | 1.54e-171 | 489 |
| MS.gene059592.t1 | MTR_1g042280 | 76.157 | 281 | 64 | 2 | 40 | 317 | 9 | 289 | 1.77e-162 | 459 |
| MS.gene059592.t1 | MTR_0492s0030 | 67.412 | 313 | 99 | 2 | 1 | 310 | 1 | 313 | 3.21e-156 | 446 |
| MS.gene059592.t1 | MTR_0543s0020 | 67.412 | 313 | 99 | 2 | 1 | 310 | 1 | 313 | 3.21e-156 | 446 |
| MS.gene059592.t1 | MTR_2g099670 | 61.453 | 358 | 122 | 7 | 62 | 411 | 10 | 359 | 1.20e-148 | 429 |
| MS.gene059592.t1 | MTR_1g075870 | 70.968 | 279 | 77 | 3 | 58 | 332 | 2 | 280 | 3.13e-147 | 420 |
| MS.gene059592.t1 | MTR_2g039930 | 76.606 | 218 | 51 | 0 | 82 | 299 | 1 | 218 | 2.85e-129 | 378 |
| MS.gene059592.t1 | MTR_7g097160 | 80.392 | 153 | 30 | 0 | 145 | 297 | 26 | 178 | 4.73e-89 | 274 |
| MS.gene059592.t1 | MTR_7g006030 | 36.268 | 284 | 164 | 5 | 9 | 278 | 37 | 317 | 1.46e-55 | 194 |
| MS.gene059592.t1 | MTR_1g116210 | 37.818 | 275 | 157 | 6 | 9 | 273 | 119 | 389 | 4.75e-54 | 191 |
| MS.gene059592.t1 | MTR_7g085540 | 36.749 | 283 | 161 | 6 | 9 | 277 | 147 | 425 | 2.33e-53 | 189 |
| MS.gene059592.t1 | MTR_1g007150 | 36.996 | 273 | 161 | 5 | 9 | 273 | 124 | 393 | 2.66e-53 | 189 |
| MS.gene059592.t1 | MTR_3g110240 | 36.264 | 273 | 163 | 5 | 9 | 273 | 121 | 390 | 7.80e-52 | 185 |
| MS.gene059592.t1 | MTR_8g014050 | 34.043 | 282 | 164 | 6 | 9 | 273 | 128 | 404 | 1.95e-47 | 172 |
| MS.gene059592.t1 | MTR_7g116400 | 46.429 | 84 | 42 | 2 | 82 | 162 | 3 | 86 | 5.11e-16 | 73.6 |
| MS.gene059592.t1 | MTR_7g073520 | 26.050 | 238 | 158 | 5 | 3 | 236 | 142 | 365 | 4.57e-13 | 71.2 |
| MS.gene059592.t1 | MTR_5g069000 | 25.000 | 288 | 151 | 9 | 2 | 249 | 756 | 1018 | 6.78e-13 | 71.2 |
| MS.gene059592.t1 | MTR_4g035835 | 25.091 | 275 | 147 | 8 | 2 | 236 | 752 | 1007 | 9.15e-13 | 70.9 |
| MS.gene059592.t1 | MTR_8g099095 | 31.132 | 212 | 128 | 8 | 9 | 213 | 66 | 266 | 1.46e-12 | 69.7 |
| MS.gene059592.t1 | MTR_5g009830 | 29.384 | 211 | 133 | 6 | 9 | 213 | 67 | 267 | 5.78e-12 | 67.4 |
| MS.gene059592.t1 | MTR_5g009830 | 29.384 | 211 | 133 | 6 | 9 | 213 | 67 | 267 | 7.69e-12 | 67.4 |
| MS.gene059592.t1 | MTR_1g105290 | 26.818 | 220 | 134 | 8 | 8 | 213 | 54 | 260 | 9.24e-12 | 67.4 |
| MS.gene059592.t1 | MTR_7g113490 | 26.364 | 220 | 135 | 7 | 8 | 213 | 67 | 273 | 1.08e-11 | 67.0 |
| MS.gene059592.t1 | MTR_1g105290 | 26.818 | 220 | 134 | 8 | 8 | 213 | 54 | 260 | 1.40e-11 | 66.6 |
| MS.gene059592.t1 | MTR_3g098090 | 28.017 | 232 | 148 | 6 | 9 | 234 | 32 | 250 | 1.77e-11 | 66.2 |
| MS.gene059592.t1 | MTR_1g105290 | 26.818 | 220 | 134 | 8 | 8 | 213 | 54 | 260 | 2.11e-11 | 65.9 |
| MS.gene059592.t1 | MTR_4g107490 | 30.968 | 155 | 100 | 4 | 5 | 153 | 69 | 222 | 2.64e-11 | 65.9 |
| MS.gene059592.t1 | MTR_4g132860 | 29.412 | 170 | 103 | 4 | 100 | 269 | 178 | 330 | 3.28e-11 | 65.1 |
| MS.gene059592.t1 | MTR_5g092815 | 26.407 | 231 | 151 | 8 | 9 | 233 | 91 | 308 | 4.04e-11 | 64.7 |
| MS.gene059592.t1 | MTR_8g079790 | 27.803 | 223 | 134 | 9 | 6 | 213 | 122 | 332 | 4.52e-11 | 65.1 |
| MS.gene059592.t1 | MTR_3g051770 | 26.754 | 228 | 148 | 6 | 9 | 230 | 84 | 298 | 5.24e-11 | 64.7 |
| MS.gene059592.t1 | MTR_3g092230 | 28.767 | 219 | 134 | 7 | 6 | 213 | 135 | 342 | 7.09e-11 | 64.7 |
| MS.gene059592.t1 | MTR_4g128820 | 28.936 | 235 | 132 | 10 | 8 | 229 | 9 | 221 | 8.35e-11 | 63.9 |
| MS.gene059592.t1 | MTR_4g086660 | 26.977 | 215 | 139 | 5 | 8 | 213 | 136 | 341 | 8.80e-11 | 64.3 |
| MS.gene059592.t1 | MTR_3g099920 | 28.899 | 218 | 129 | 8 | 9 | 216 | 19 | 220 | 8.97e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059592.t1 | AT4G28880 | 70.883 | 419 | 107 | 4 | 1 | 410 | 1 | 413 | 0.0 | 612 |
| MS.gene059592.t1 | AT4G28880 | 70.883 | 419 | 107 | 4 | 1 | 410 | 1 | 413 | 0.0 | 612 |
| MS.gene059592.t1 | AT4G28880 | 70.883 | 419 | 107 | 4 | 1 | 410 | 1 | 413 | 0.0 | 612 |
| MS.gene059592.t1 | AT4G28880 | 70.883 | 419 | 107 | 4 | 1 | 410 | 1 | 413 | 0.0 | 612 |
| MS.gene059592.t1 | AT4G28860 | 71.801 | 422 | 102 | 7 | 1 | 416 | 1 | 411 | 0.0 | 607 |
| MS.gene059592.t1 | AT4G28860 | 79.339 | 363 | 68 | 3 | 1 | 358 | 1 | 361 | 0.0 | 602 |
| MS.gene059592.t1 | AT4G26100 | 72.000 | 325 | 90 | 1 | 1 | 325 | 1 | 324 | 7.34e-180 | 509 |
| MS.gene059592.t1 | AT5G57015 | 71.875 | 320 | 90 | 0 | 1 | 320 | 1 | 320 | 8.31e-178 | 503 |
| MS.gene059592.t1 | AT1G72710 | 69.275 | 345 | 103 | 3 | 1 | 345 | 1 | 342 | 3.04e-177 | 503 |
| MS.gene059592.t1 | AT2G19470 | 68.452 | 336 | 96 | 3 | 1 | 327 | 1 | 335 | 1.14e-175 | 498 |
| MS.gene059592.t1 | AT1G03930 | 75.084 | 297 | 74 | 0 | 1 | 297 | 1 | 297 | 5.02e-175 | 498 |
| MS.gene059592.t1 | AT4G28540 | 75.503 | 298 | 73 | 0 | 1 | 298 | 5 | 302 | 8.32e-175 | 497 |
| MS.gene059592.t1 | AT5G44100 | 69.394 | 330 | 90 | 1 | 1 | 319 | 1 | 330 | 2.97e-174 | 496 |
| MS.gene059592.t1 | AT5G44100 | 69.394 | 330 | 90 | 1 | 1 | 319 | 1 | 330 | 2.97e-174 | 496 |
| MS.gene059592.t1 | AT3G23340 | 72.756 | 312 | 84 | 1 | 1 | 312 | 1 | 311 | 6.75e-174 | 494 |
| MS.gene059592.t1 | AT5G43320 | 73.737 | 297 | 78 | 0 | 1 | 297 | 1 | 297 | 2.20e-170 | 486 |
| MS.gene059592.t1 | AT4G14340 | 71.474 | 312 | 88 | 1 | 1 | 312 | 7 | 317 | 6.97e-170 | 484 |
| MS.gene059592.t1 | AT1G04440 | 69.018 | 326 | 93 | 2 | 1 | 318 | 1 | 326 | 2.93e-169 | 483 |
| MS.gene059592.t1 | AT4G14340 | 71.474 | 312 | 88 | 1 | 1 | 312 | 7 | 317 | 3.24e-169 | 479 |
| MS.gene059592.t1 | AT5G43320 | 73.737 | 297 | 78 | 0 | 1 | 297 | 1 | 297 | 2.70e-168 | 476 |
| MS.gene059592.t1 | AT5G43320 | 73.737 | 297 | 78 | 0 | 1 | 297 | 1 | 297 | 2.70e-168 | 476 |
| MS.gene059592.t1 | AT3G23340 | 69.231 | 312 | 81 | 2 | 1 | 312 | 1 | 297 | 4.10e-161 | 461 |
| MS.gene059592.t1 | AT4G08800 | 62.585 | 294 | 78 | 2 | 1 | 294 | 1 | 262 | 3.69e-135 | 389 |
| MS.gene059592.t1 | AT2G25760 | 38.214 | 280 | 158 | 4 | 9 | 273 | 107 | 386 | 4.81e-57 | 199 |
| MS.gene059592.t1 | AT3G03940 | 37.809 | 283 | 158 | 6 | 9 | 277 | 140 | 418 | 1.59e-55 | 195 |
| MS.gene059592.t1 | AT2G25760 | 37.857 | 280 | 156 | 5 | 9 | 273 | 107 | 383 | 7.54e-55 | 193 |
| MS.gene059592.t1 | AT5G18190 | 36.842 | 285 | 162 | 6 | 9 | 279 | 130 | 410 | 5.83e-54 | 191 |
| MS.gene059592.t1 | AT5G18190 | 36.842 | 285 | 162 | 6 | 9 | 279 | 130 | 410 | 5.83e-54 | 191 |
| MS.gene059592.t1 | AT3G13670 | 35.211 | 284 | 167 | 5 | 9 | 278 | 137 | 417 | 2.19e-53 | 189 |
| MS.gene059592.t1 | AT4G23650 | 29.384 | 211 | 133 | 6 | 9 | 213 | 78 | 278 | 6.02e-13 | 70.9 |
| MS.gene059592.t1 | AT1G54960 | 27.064 | 218 | 136 | 7 | 8 | 213 | 67 | 273 | 1.35e-12 | 70.1 |
| MS.gene059592.t1 | AT1G54960 | 27.064 | 218 | 136 | 7 | 8 | 213 | 67 | 273 | 1.35e-12 | 70.1 |
| MS.gene059592.t1 | AT3G23000 | 30.303 | 231 | 140 | 9 | 3 | 224 | 19 | 237 | 2.67e-12 | 68.6 |
| MS.gene059592.t1 | AT3G06030 | 26.147 | 218 | 138 | 7 | 8 | 213 | 67 | 273 | 2.83e-12 | 68.9 |
| MS.gene059592.t1 | AT2G46700 | 26.267 | 217 | 142 | 4 | 6 | 213 | 140 | 347 | 5.97e-12 | 67.8 |
| MS.gene059592.t1 | AT3G08720 | 24.370 | 238 | 160 | 6 | 4 | 236 | 134 | 356 | 6.98e-12 | 67.4 |
| MS.gene059592.t1 | AT3G08720 | 24.370 | 238 | 160 | 6 | 4 | 236 | 134 | 356 | 6.98e-12 | 67.4 |
| MS.gene059592.t1 | AT3G08720 | 24.370 | 238 | 160 | 6 | 4 | 236 | 134 | 356 | 6.98e-12 | 67.4 |
| MS.gene059592.t1 | AT3G08720 | 24.370 | 238 | 160 | 6 | 4 | 236 | 134 | 356 | 6.98e-12 | 67.4 |
| MS.gene059592.t1 | AT2G41860 | 27.907 | 215 | 139 | 6 | 5 | 213 | 50 | 254 | 7.26e-12 | 67.4 |
| MS.gene059592.t1 | AT3G50530 | 26.941 | 219 | 140 | 7 | 5 | 213 | 144 | 352 | 9.70e-12 | 67.4 |
| MS.gene059592.t1 | AT1G09000 | 27.189 | 217 | 135 | 7 | 9 | 213 | 69 | 274 | 1.15e-11 | 67.0 |
| MS.gene059592.t1 | AT2G41860 | 27.907 | 215 | 139 | 6 | 5 | 213 | 50 | 254 | 1.18e-11 | 67.0 |
| MS.gene059592.t1 | AT1G09000 | 27.189 | 217 | 135 | 7 | 9 | 213 | 69 | 274 | 1.64e-11 | 66.6 |
| MS.gene059592.t1 | AT3G17850 | 24.254 | 268 | 159 | 8 | 2 | 236 | 875 | 1131 | 1.66e-11 | 67.0 |
| MS.gene059592.t1 | AT1G74740 | 27.442 | 215 | 140 | 6 | 5 | 213 | 55 | 259 | 1.67e-11 | 66.6 |
| MS.gene059592.t1 | AT3G08730 | 23.790 | 248 | 169 | 6 | 4 | 246 | 128 | 360 | 1.92e-11 | 66.2 |
| MS.gene059592.t1 | AT3G08730 | 23.790 | 248 | 169 | 6 | 4 | 246 | 128 | 360 | 1.92e-11 | 66.2 |
| MS.gene059592.t1 | AT3G20410 | 27.193 | 228 | 147 | 6 | 9 | 230 | 91 | 305 | 2.14e-11 | 66.2 |
| MS.gene059592.t1 | AT3G20410 | 27.193 | 228 | 147 | 6 | 9 | 230 | 91 | 305 | 2.14e-11 | 66.2 |
| MS.gene059592.t1 | AT2G17890 | 25.116 | 215 | 145 | 5 | 8 | 215 | 107 | 312 | 2.85e-11 | 65.9 |
| MS.gene059592.t1 | AT4G24400 | 27.686 | 242 | 126 | 9 | 8 | 227 | 8 | 222 | 4.45e-11 | 65.1 |
| MS.gene059592.t1 | AT4G24400 | 27.686 | 242 | 126 | 9 | 8 | 227 | 8 | 222 | 5.56e-11 | 64.3 |
| MS.gene059592.t1 | AT1G18890 | 28.182 | 220 | 132 | 7 | 5 | 213 | 59 | 263 | 5.80e-11 | 64.7 |
| MS.gene059592.t1 | AT3G49370 | 28.571 | 217 | 133 | 7 | 8 | 213 | 141 | 346 | 6.15e-11 | 64.7 |
| MS.gene059592.t1 | AT1G50700 | 27.273 | 231 | 149 | 7 | 9 | 233 | 73 | 290 | 8.14e-11 | 64.3 |
| MS.gene059592.t1 | AT1G50700 | 27.273 | 231 | 149 | 7 | 9 | 233 | 73 | 290 | 8.88e-11 | 64.3 |
| MS.gene059592.t1 | AT1G50700 | 27.273 | 231 | 149 | 7 | 9 | 233 | 73 | 290 | 9.02e-11 | 64.3 |
Find 114 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGTATATGTAATTGATTT+TGG | 0.199306 | 6.4:+61146315 | MS.gene059592:intron |
| ATTCTTGAGGCGCCTATTTC+GGG | 0.201735 | 6.4:+61147157 | MS.gene059592:CDS |
| GATTCTTGAGGCGCCTATTT+CGG | 0.235818 | 6.4:+61147156 | MS.gene059592:CDS |
| TTTGATCAGCGACCTGATTA+TGG | 0.244829 | 6.4:+61147134 | MS.gene059592:CDS |
| GAGCAAATAACTCCCGAAAT+AGG | 0.299908 | 6.4:-61147169 | None:intergenic |
| GCTTCTTTGTCGCAGCCTTT+AGG | 0.310608 | 6.4:-61146919 | None:intergenic |
| AGAATGCACATACTCTATTC+TGG | 0.314521 | 6.4:-61146102 | None:intergenic |
| ACAAAGCCGCCGGGATGATT+TGG | 0.324631 | 6.4:+61146728 | MS.gene059592:CDS |
| AATTTGATTATGTATTTGAT+TGG | 0.332820 | 6.4:+61147683 | MS.gene059592:CDS |
| TTGGGCTTGCAAAACGATAT+CGG | 0.336257 | 6.4:+61146334 | MS.gene059592:CDS |
| TACCGCCTGATGATTTAAAC+TGG | 0.353819 | 6.4:-61148049 | None:intergenic |
| TCAGACAATGCCGCTTCTTC+CGG | 0.363687 | 6.4:+61148017 | MS.gene059592:CDS |
| TCGAAAGAGTGTGAAGTAGA+AGG | 0.370593 | 6.4:-61148287 | None:intergenic |
| GTGCTTGTTATGGATTTGTT+GGG | 0.373490 | 6.4:+61145827 | MS.gene059592:CDS |
| GGAAGACAATGTGCTTGTTA+TGG | 0.374985 | 6.4:+61145817 | MS.gene059592:CDS |
| AAGTTCCAGTTTAAATCATC+AGG | 0.379006 | 6.4:+61148044 | MS.gene059592:CDS |
| GCAAGCTGCAATACTCATCT+TGG | 0.385425 | 6.4:+61146614 | MS.gene059592:CDS |
| TGCTCCCTTGCCCATGCCTA+TGG | 0.400254 | 6.4:-61148361 | None:intergenic |
| GCCCGATTGTTGCTCGCTAC+AGG | 0.409927 | 6.4:-61147852 | None:intergenic |
| TGTGCTTGTTATGGATTTGT+TGG | 0.413619 | 6.4:+61145826 | MS.gene059592:CDS |
| TTCCTGTAGCGAGCAACAAT+CGG | 0.414919 | 6.4:+61147850 | MS.gene059592:CDS |
| TTGGCTTCTGAGAATCATCT+TGG | 0.415195 | 6.4:+61148077 | MS.gene059592:CDS |
| GGGCAGATGCTTACCTCAAT+AGG | 0.418445 | 6.4:-61146980 | None:intergenic |
| CGCCTCAAGAATCCATAATC+AGG | 0.420387 | 6.4:-61147146 | None:intergenic |
| TAGAAAGTTCAAAACCTGTA+TGG | 0.426001 | 6.4:-61146381 | None:intergenic |
| ATCGGTGATAAATTCAAGTT+AGG | 0.432066 | 6.4:+61144289 | MS.gene059592:CDS |
| CGGGATGATTTGGAGTCTCT+TGG | 0.432361 | 6.4:+61146738 | MS.gene059592:CDS |
| TGGGCTTGCAAAACGATATC+GGG | 0.435539 | 6.4:+61146335 | MS.gene059592:CDS |
| TGGGATGTGGCGATTGGTTG+TGG | 0.437079 | 6.4:-61146361 | None:intergenic |
| GGGCAAGGGAGCAGTAAAAT+TGG | 0.439859 | 6.4:+61148371 | MS.gene059592:CDS |
| CACCACTCCATCTTATGCTT+GGG | 0.449410 | 6.4:-61145787 | None:intergenic |
| ATAGAGTATGTGCATTCTAA+AGG | 0.458276 | 6.4:+61146107 | MS.gene059592:CDS |
| CTTGATGTTGGCTGATCAAA+TGG | 0.461622 | 6.4:+61145907 | MS.gene059592:CDS |
| TACTTACGGATATGTGAGGC+TGG | 0.464438 | 6.4:-61147744 | None:intergenic |
| ACATTCATCCGACTACTTGA+AGG | 0.474136 | 6.4:-61148395 | None:intergenic |
| GGTTCAAGCACCAACCTTGT+TGG | 0.476423 | 6.4:-61147896 | None:intergenic |
| CCTCCATAGGGATATAAAAC+CGG | 0.477649 | 6.4:+61146133 | MS.gene059592:CDS |
| ATTCTAAAGGGTTCCTCCAT+AGG | 0.479961 | 6.4:+61146120 | MS.gene059592:CDS |
| TGCAATACTCATCTTGGGAT+TGG | 0.480350 | 6.4:+61146620 | MS.gene059592:CDS |
| TCTGTTGTGTTGCAGGAGAC+TGG | 0.481529 | 6.4:+61145168 | MS.gene059592:intron |
| CAAGCTGCAATACTCATCTT+GGG | 0.484146 | 6.4:+61146615 | MS.gene059592:CDS |
| AAGCTCTATAATATTCTTCA+AGG | 0.485336 | 6.4:+61145225 | MS.gene059592:CDS |
| TAAGATGGAGTGGTGTAGAC+GGG | 0.495163 | 6.4:+61145795 | MS.gene059592:CDS |
| AGTGGACGCGGAAGGCTTCA+AGG | 0.495368 | 6.4:-61148327 | None:intergenic |
| ACACCACTCCATCTTATGCT+TGG | 0.495604 | 6.4:-61145788 | None:intergenic |
| TTGTTGGTTATCAATATCCA+TGG | 0.497091 | 6.4:-61147880 | None:intergenic |
| AGGTCAAAGAATGGCAGTAA+TGG | 0.499416 | 6.4:-61147112 | None:intergenic |
| TCCTGTAGCGAGCAACAATC+GGG | 0.501671 | 6.4:+61147851 | MS.gene059592:CDS |
| TTGTTGCTCGCTACAGGAAC+CGG | 0.502364 | 6.4:-61147846 | None:intergenic |
| GCTTGCATAACGCGCAGTCC+CGG | 0.502927 | 6.4:-61146597 | None:intergenic |
| TAGAGTATGTGCATTCTAAA+GGG | 0.503360 | 6.4:+61146108 | MS.gene059592:CDS |
| CCTTCCCTGGCAAAACCTAA+AGG | 0.504434 | 6.4:+61146904 | MS.gene059592:CDS |
| TAATTGTGTTTAGCCTTCCC+TGG | 0.508361 | 6.4:+61146891 | MS.gene059592:intron |
| CCTCAAAACTGTCTTGATGT+TGG | 0.516363 | 6.4:+61145895 | MS.gene059592:CDS |
| GAAAGTATCAACTCCTATTG+AGG | 0.519371 | 6.4:+61146967 | MS.gene059592:CDS |
| ACTTGGTCGGAAGGCAAACC+TGG | 0.520669 | 6.4:+61146172 | MS.gene059592:CDS |
| TTAGGACGCAAGATCGGAAG+TGG | 0.521534 | 6.4:+61144307 | MS.gene059592:CDS |
| TTCTAAAGGGTTCCTCCATA+GGG | 0.522924 | 6.4:+61146121 | MS.gene059592:CDS |
| AAGATCGGAAGTGGATCCTT+CGG | 0.526716 | 6.4:+61144316 | MS.gene059592:CDS |
| AGAAAGTTCAAAACCTGTAT+GGG | 0.527700 | 6.4:-61146380 | None:intergenic |
| CGGGAGTTATTTGCTCGAGA+AGG | 0.530876 | 6.4:+61147176 | MS.gene059592:CDS |
| GTGGTATCCCAAGCATAAGA+TGG | 0.531050 | 6.4:+61145780 | MS.gene059592:CDS |
| CCAATCGCCACATCCCATAC+AGG | 0.535975 | 6.4:+61146367 | MS.gene059592:CDS |
| CGAAAGAGTGTGAAGTAGAA+GGG | 0.539972 | 6.4:-61148286 | None:intergenic |
| GATAACTTTCTCATGGGACT+TGG | 0.540360 | 6.4:+61146155 | MS.gene059592:CDS |
| AAGTACGAAGCAAACTCTAC+AGG | 0.544026 | 6.4:-61147089 | None:intergenic |
| CCTATGGTTTGCAGCTTCAG+TGG | 0.548768 | 6.4:-61148345 | None:intergenic |
| TCCTTCGGTGAAATCTATCT+CGG | 0.549980 | 6.4:+61144331 | MS.gene059592:CDS |
| TTCAAGTTAGGACGCAAGAT+CGG | 0.551617 | 6.4:+61144301 | MS.gene059592:CDS |
| TTTGTTGGGGCCTAGTCTTG+AGG | 0.553272 | 6.4:+61145841 | MS.gene059592:CDS |
| TTCAAAACCTGTATGGGATG+TGG | 0.553955 | 6.4:-61146374 | None:intergenic |
| TTAGCTTCATAAAGCAATTG+TGG | 0.553963 | 6.4:-61145204 | None:intergenic |
| CAACAATCGGGCAATGCCCA+TGG | 0.556507 | 6.4:+61147863 | MS.gene059592:CDS |
| AAACCGGATAACTTTCTCAT+GGG | 0.561522 | 6.4:+61146149 | MS.gene059592:CDS |
| GCAAACCATAGGCATGGGCA+AGG | 0.564524 | 6.4:+61148356 | MS.gene059592:CDS |
| TCTCATGGGACTTGGTCGGA+AGG | 0.565028 | 6.4:+61146163 | MS.gene059592:CDS |
| GAAGCTGCAAACCATAGGCA+TGG | 0.565598 | 6.4:+61148350 | MS.gene059592:CDS |
| AGATTCATGGATCGAATCAT+CGG | 0.566316 | 6.4:+61144271 | None:intergenic |
| GCAGCTTCAGTGGACGCGGA+AGG | 0.566995 | 6.4:-61148335 | None:intergenic |
| ATAAGATGGAGTGGTGTAGA+CGG | 0.572946 | 6.4:+61145794 | MS.gene059592:CDS |
| ATAATCAGGTCGCTGATCAA+AGG | 0.572957 | 6.4:-61147132 | None:intergenic |
| AAAACCGGATAACTTTCTCA+TGG | 0.575825 | 6.4:+61146148 | MS.gene059592:CDS |
| CCACTGAAGCTGCAAACCAT+AGG | 0.576164 | 6.4:+61148345 | MS.gene059592:CDS |
| AGTCCCATGAGAAAGTTATC+CGG | 0.577140 | 6.4:-61146152 | None:intergenic |
| TGCTTGTTATGGATTTGTTG+GGG | 0.580128 | 6.4:+61145828 | MS.gene059592:CDS |
| GTTTGCAGCTTCAGTGGACG+CGG | 0.581258 | 6.4:-61148339 | None:intergenic |
| GCTGATCAAAGGTCAAAGAA+TGG | 0.590024 | 6.4:-61147121 | None:intergenic |
| ACTTTCTCATGGGACTTGGT+CGG | 0.592057 | 6.4:+61146159 | MS.gene059592:CDS |
| ACGAAGCAAACTCTACAGGA+TGG | 0.592572 | 6.4:-61147085 | None:intergenic |
| AAGCTGCAAACCATAGGCAT+GGG | 0.597512 | 6.4:+61148351 | MS.gene059592:CDS |
| ATTTGTAGAACAAAGCCGCC+GGG | 0.602617 | 6.4:+61146719 | MS.gene059592:intron |
| CCTGTATGGGATGTGGCGAT+TGG | 0.602796 | 6.4:-61146367 | None:intergenic |
| TGTTGGTTATCAATATCCAT+GGG | 0.604040 | 6.4:-61147879 | None:intergenic |
| GAACTTAACACCGGAAGAAG+CGG | 0.606399 | 6.4:-61148027 | None:intergenic |
| AAATTGGTCCTTCAAGTAGT+CGG | 0.607497 | 6.4:+61148387 | MS.gene059592:CDS |
| ACTCTTTCGAAGCATCAAGA+AGG | 0.609101 | 6.4:+61148300 | MS.gene059592:CDS |
| CGAAGCAAACTCTACAGGAT+GGG | 0.611082 | 6.4:-61147084 | None:intergenic |
| ATCCCAAGCATAAGATGGAG+TGG | 0.620505 | 6.4:+61145785 | MS.gene059592:CDS |
| ACCGAGATAGATTTCACCGA+AGG | 0.620573 | 6.4:-61144332 | None:intergenic |
| CAAGAGACTCCAAATCATCC+CGG | 0.622494 | 6.4:-61146737 | None:intergenic |
| TTTAAACTGGAACTTAACAC+CGG | 0.623764 | 6.4:-61148036 | None:intergenic |
| TTCCAGTTTAAATCATCAGG+CGG | 0.630569 | 6.4:+61148047 | MS.gene059592:CDS |
| ACTTACGGATATGTGAGGCT+GGG | 0.634330 | 6.4:-61147743 | None:intergenic |
| CTCTATAATATTCTTCAAGG+AGG | 0.636528 | 6.4:+61145228 | MS.gene059592:CDS |
| TATTTGTAGAACAAAGCCGC+CGG | 0.642128 | 6.4:+61146718 | MS.gene059592:intron |
| CAAACCATAGGCATGGGCAA+GGG | 0.646006 | 6.4:+61148357 | MS.gene059592:CDS |
| CTTGACAGCAACGATCTCGA+AGG | 0.646641 | 6.4:-61144466 | None:intergenic |
| AATATACTTACGGATATGTG+AGG | 0.660737 | 6.4:-61147748 | None:intergenic |
| AAGATGGAGTGGTGTAGACG+GGG | 0.662328 | 6.4:+61145796 | MS.gene059592:CDS |
| GACCTGATTATGGATTCTTG+AGG | 0.667363 | 6.4:+61147144 | MS.gene059592:CDS |
| GAATGCCATACCTTCCTCTG+AGG | 0.704652 | 6.4:-61146779 | None:intergenic |
| ATGGATATTGATAACCAACA+AGG | 0.718739 | 6.4:+61147882 | MS.gene059592:CDS |
| TTATACAGGGGATGTCTCAG+CGG | 0.724472 | 6.4:+61147983 | MS.gene059592:intron |
| GAGACTCCAAATCATCCCGG+CGG | 0.750112 | 6.4:-61146734 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAAAAAAAAAAAGAAA+TGG | - | chr6.4:61144506-61144525 | None:intergenic | 10.0% |
| !! | ATAAACAACATATTAAAATT+TGG | - | chr6.4:61148235-61148254 | None:intergenic | 10.0% |
| !!! | AAAAAATTAATATTTTCAGA+TGG | - | chr6.4:61147816-61147835 | None:intergenic | 10.0% |
| !!! | AATTCATTAAGTATTAATTT+TGG | - | chr6.4:61146549-61146568 | None:intergenic | 10.0% |
| !!! | ACATGTTTTTTTATTTTATT+TGG | + | chr6.4:61146069-61146088 | MS.gene059592:intron | 10.0% |
| !!! | ATTCATTAAGTATTAATTTT+GGG | - | chr6.4:61146548-61146567 | None:intergenic | 10.0% |
| !!! | CATGTTTTTTTATTTTATTT+GGG | + | chr6.4:61146070-61146089 | MS.gene059592:intron | 10.0% |
| !!! | TTATTATTTTTGTAGATTTT+TGG | + | chr6.4:61148251-61148270 | MS.gene059592:intron | 10.0% |
| !! | AATTTGATTATGTATTTGAT+TGG | + | chr6.4:61147683-61147702 | MS.gene059592:CDS | 15.0% |
| !! | ATAAGAAAATTGATGTTAAA+TGG | + | chr6.4:61147516-61147535 | MS.gene059592:intron | 15.0% |
| !! | TAAGAAAATTGATGTTAAAT+GGG | + | chr6.4:61147517-61147536 | MS.gene059592:intron | 15.0% |
| !!! | AAATTTGTTGAAATTATGTT+TGG | - | chr6.4:61144790-61144809 | None:intergenic | 15.0% |
| !!! | CAGTAAAAATACAATTTTTA+GGG | + | chr6.4:61145380-61145399 | MS.gene059592:intron | 15.0% |
| !!! | TCAGTAAAAATACAATTTTT+AGG | + | chr6.4:61145379-61145398 | MS.gene059592:intron | 15.0% |
| !!! | TTTTTTTATGAATGAAGTTT+AGG | - | chr6.4:61147479-61147498 | None:intergenic | 15.0% |
| !! | ACAACAATGAAAATAATGAA+AGG | - | chr6.4:61145274-61145293 | None:intergenic | 20.0% |
| !! | ATAACAAAGAAATAAGCATT+TGG | - | chr6.4:61147017-61147036 | None:intergenic | 20.0% |
| !! | ATCTTGTTCATTATTACTAA+TGG | + | chr6.4:61147946-61147965 | MS.gene059592:intron | 20.0% |
| !! | TAAAGTGAATGAATTAACAA+TGG | - | chr6.4:61146417-61146436 | None:intergenic | 20.0% |
| !! | TTATGCAGAAGAAAAAAATA+TGG | - | chr6.4:61147920-61147939 | None:intergenic | 20.0% |
| !!! | AGGTATATGTAATTGATTTT+GGG | + | chr6.4:61146316-61146335 | MS.gene059592:intron | 20.0% |
| !!! | AGTATATGTTCTGATTTTTA+CGG | + | chr6.4:61146861-61146880 | MS.gene059592:intron | 20.0% |
| !!! | ATTAATATTTTCAGATGGAT+TGG | - | chr6.4:61147811-61147830 | None:intergenic | 20.0% |
| !!! | ATTAATTTTGGGTATTTCTA+AGG | - | chr6.4:61146537-61146556 | None:intergenic | 20.0% |
| !!! | GAATTAACAATGGATTATAA+TGG | - | chr6.4:61146407-61146426 | None:intergenic | 20.0% |
| !!! | TAGTGTATGTTTTTTTATCA+CGG | + | chr6.4:61144564-61144583 | MS.gene059592:intron | 20.0% |
| !!! | TCATCTAAAATGTCAAATAT+CGG | - | chr6.4:61145432-61145451 | None:intergenic | 20.0% |
| !!! | TTAATGAATTTTACAACACA+GGG | + | chr6.4:61146559-61146578 | MS.gene059592:intron | 20.0% |
| !!! | TTAATTTTGGGTATTTCTAA+GGG | - | chr6.4:61146536-61146555 | None:intergenic | 20.0% |
| !!! | TTCATTATTTTCATTGTTGT+GGG | + | chr6.4:61145274-61145293 | MS.gene059592:intron | 20.0% |
| !!! | TTTCATTATTTTCATTGTTG+TGG | + | chr6.4:61145273-61145292 | MS.gene059592:intron | 20.0% |
| ! | AAACTTTCTTTAAGCATGTT+TGG | - | chr6.4:61144652-61144671 | None:intergenic | 25.0% |
| ! | AAGAGAATTTGATTGATTGA+AGG | - | chr6.4:61144363-61144382 | None:intergenic | 25.0% |
| ! | AAGCTCTATAATATTCTTCA+AGG | + | chr6.4:61145225-61145244 | MS.gene059592:CDS | 25.0% |
| ! | AATGATTAATGCTTATACAG+GGG | + | chr6.4:61147971-61147990 | MS.gene059592:intron | 25.0% |
| ! | ACAATGATTAATGCTTATAC+AGG | + | chr6.4:61147969-61147988 | MS.gene059592:intron | 25.0% |
| ! | ACTGACTAAAAAACATCATA+AGG | - | chr6.4:61145967-61145986 | None:intergenic | 25.0% |
| ! | AGAAATGAAATGTGTCAATT+TGG | + | chr6.4:61145336-61145355 | MS.gene059592:intron | 25.0% |
| ! | CAATGATTAATGCTTATACA+GGG | + | chr6.4:61147970-61147989 | MS.gene059592:intron | 25.0% |
| ! | CACACACATAAATATACTTA+CGG | - | chr6.4:61147761-61147780 | None:intergenic | 25.0% |
| ! | TAACTGTATATTCATTTACC+AGG | - | chr6.4:61146193-61146212 | None:intergenic | 25.0% |
| ! | TCATTTCTTAAGGATCAAAT+AGG | + | chr6.4:61145467-61145486 | MS.gene059592:intron | 25.0% |
| ! | TGGGATTTAATTGAAAATGT+TGG | + | chr6.4:61145737-61145756 | MS.gene059592:intron | 25.0% |
| ! | TTCAACATTAACATCAAATC+CGG | - | chr6.4:61146460-61146479 | None:intergenic | 25.0% |
| !! | AAGCATTTGGAATAGTTATA+TGG | - | chr6.4:61147004-61147023 | None:intergenic | 25.0% |
| !! | AGCATTTGGAATAGTTATAT+GGG | - | chr6.4:61147003-61147022 | None:intergenic | 25.0% |
| !! | CTTAATGAATTTTACAACAC+AGG | + | chr6.4:61146558-61146577 | MS.gene059592:intron | 25.0% |
| !! | GACATTTTAGATGATTGAAT+CGG | + | chr6.4:61145438-61145457 | MS.gene059592:intron | 25.0% |
| !! | TTCACAAGTTTGAAACATAA+AGG | - | chr6.4:61148193-61148212 | None:intergenic | 25.0% |
| !! | TTTTATGAATGAAGTTTAGG+TGG | - | chr6.4:61147476-61147495 | None:intergenic | 25.0% |
| !!! | ATGAACTATATTGATTTGCA+TGG | + | chr6.4:61145067-61145086 | MS.gene059592:intron | 25.0% |
| !!! | CAGGTATATGTAATTGATTT+TGG | + | chr6.4:61146315-61146334 | MS.gene059592:intron | 25.0% |
| !!! | GGATTTTGTTTAATTAATGC+AGG | + | chr6.4:61145758-61145777 | MS.gene059592:intron | 25.0% |
| !!! | TAATTTTTTCTTATTGCAGC+CGG | + | chr6.4:61147827-61147846 | MS.gene059592:intron | 25.0% |
| !!! | TTTTGTTTAATTAATGCAGG+TGG | + | chr6.4:61145761-61145780 | MS.gene059592:intron | 25.0% |
| AAATCCGGTAAAAAAAAGAG+GGG | - | chr6.4:61146445-61146464 | None:intergenic | 30.0% | |
| AAGTTCCAGTTTAAATCATC+AGG | + | chr6.4:61148044-61148063 | MS.gene059592:CDS | 30.0% | |
| AATATACTTACGGATATGTG+AGG | - | chr6.4:61147751-61147770 | None:intergenic | 30.0% | |
| AATCGGTCAATTCTAAATGT+AGG | - | chr6.4:61146227-61146246 | None:intergenic | 30.0% | |
| AGAAAGTTCAAAACCTGTAT+GGG | - | chr6.4:61146383-61146402 | None:intergenic | 30.0% | |
| ATACTTATGTTGCTCTCAAT+AGG | - | chr6.4:61146846-61146865 | None:intergenic | 30.0% | |
| ATAGAGTATGTGCATTCTAA+AGG | + | chr6.4:61146107-61146126 | MS.gene059592:CDS | 30.0% | |
| ATCGGTCAATTCTAAATGTA+GGG | - | chr6.4:61146226-61146245 | None:intergenic | 30.0% | |
| CAAATCCGGTAAAAAAAAGA+GGG | - | chr6.4:61146446-61146465 | None:intergenic | 30.0% | |
| CTCTATAATATTCTTCAAGG+AGG | + | chr6.4:61145228-61145247 | MS.gene059592:CDS | 30.0% | |
| GCAAAATTCATATTCTGTTG+TGG | + | chr6.4:61147576-61147595 | MS.gene059592:intron | 30.0% | |
| GCACAAATAACATATACTCT+GGG | - | chr6.4:61145990-61146009 | None:intergenic | 30.0% | |
| GGCATTCTTATCTAGTTATT+TGG | + | chr6.4:61146795-61146814 | MS.gene059592:intron | 30.0% | |
| TACCAAACATGACAATAACA+TGG | - | chr6.4:61144699-61144718 | None:intergenic | 30.0% | |
| TAGAAAGTTCAAAACCTGTA+TGG | - | chr6.4:61146384-61146403 | None:intergenic | 30.0% | |
| TAGAGTATGTGCATTCTAAA+GGG | + | chr6.4:61146108-61146127 | MS.gene059592:CDS | 30.0% | |
| TATTGTCATGTTTGGTATCA+TGG | + | chr6.4:61144702-61144721 | MS.gene059592:intron | 30.0% | |
| TCAAATCCGGTAAAAAAAAG+AGG | - | chr6.4:61146447-61146466 | None:intergenic | 30.0% | |
| TTAGCTTCATAAAGCAATTG+TGG | - | chr6.4:61145207-61145226 | None:intergenic | 30.0% | |
| TTCAAACTTGTGAAATAGAC+TGG | + | chr6.4:61148199-61148218 | MS.gene059592:intron | 30.0% | |
| TTTAAACTGGAACTTAACAC+CGG | - | chr6.4:61148039-61148058 | None:intergenic | 30.0% | |
| TTTACTGACAATTGAGATGT+TGG | - | chr6.4:61145367-61145386 | None:intergenic | 30.0% | |
| ! | AATATGAATTTTGCGTATGG+AGG | - | chr6.4:61147570-61147589 | None:intergenic | 30.0% |
| ! | ATATTGATAACCAACAAGGT+TGG | + | chr6.4:61147886-61147905 | MS.gene059592:intron | 30.0% |
| ! | ATCGGTGATAAATTCAAGTT+AGG | + | chr6.4:61144289-61144308 | MS.gene059592:CDS | 30.0% |
| ! | ATGGATATTGATAACCAACA+AGG | + | chr6.4:61147882-61147901 | MS.gene059592:CDS | 30.0% |
| ! | CAAAAGTATGTTTGGTATCA+CGG | - | chr6.4:61145117-61145136 | None:intergenic | 30.0% |
| ! | CAGAATATGAATTTTGCGTA+TGG | - | chr6.4:61147573-61147592 | None:intergenic | 30.0% |
| ! | GCTAAAACCAAAAGTATGTT+TGG | - | chr6.4:61145125-61145144 | None:intergenic | 30.0% |
| ! | TCGGCATTTTTCATTTCTTA+AGG | + | chr6.4:61145457-61145476 | MS.gene059592:intron | 30.0% |
| ! | TGCAATTTGTTTGATGTGAA+GGG | - | chr6.4:61146669-61146688 | None:intergenic | 30.0% |
| ! | TGTTGGTTATCAATATCCAT+GGG | - | chr6.4:61147882-61147901 | None:intergenic | 30.0% |
| ! | TTGCAATTTGTTTGATGTGA+AGG | - | chr6.4:61146670-61146689 | None:intergenic | 30.0% |
| ! | TTGCTATTGTTATTGTTGCT+GGG | + | chr6.4:61145718-61145737 | MS.gene059592:intron | 30.0% |
| ! | TTGTTGGTTATCAATATCCA+TGG | - | chr6.4:61147883-61147902 | None:intergenic | 30.0% |
| !!! | ATTTGTCTGTTGTTTTGTGT+AGG | + | chr6.4:61147049-61147068 | MS.gene059592:intron | 30.0% |
| AAAACCGGATAACTTTCTCA+TGG | + | chr6.4:61146148-61146167 | MS.gene059592:CDS | 35.0% | |
| AAACCGGATAACTTTCTCAT+GGG | + | chr6.4:61146149-61146168 | MS.gene059592:CDS | 35.0% | |
| AAATTGGTCCTTCAAGTAGT+CGG | + | chr6.4:61148387-61148406 | MS.gene059592:CDS | 35.0% | |
| AATGTTGTCAATCGCAGATT+GGG | - | chr6.4:61145647-61145666 | None:intergenic | 35.0% | |
| AATTATGTTTGGTATCCCAG+TGG | - | chr6.4:61144779-61144798 | None:intergenic | 35.0% | |
| ACAAAAAGATCCTCAAGACT+AGG | - | chr6.4:61145854-61145873 | None:intergenic | 35.0% | |
| AGAATGCACATACTCTATTC+TGG | - | chr6.4:61146105-61146124 | None:intergenic | 35.0% | |
| AGAATGTAAGTCGTCTTACT+TGG | + | chr6.4:61148102-61148121 | MS.gene059592:intron | 35.0% | |
| AGCCATGTTATTGTCATGTT+TGG | + | chr6.4:61144694-61144713 | MS.gene059592:intron | 35.0% | |
| AGGGAGAACAAAAACTTAAC+CGG | + | chr6.4:61146578-61146597 | MS.gene059592:intron | 35.0% | |
| ATAATCACATGACAAGACAG+TGG | - | chr6.4:61146012-61146031 | None:intergenic | 35.0% | |
| ATCATCAGGCGGTAAAAATT+TGG | + | chr6.4:61148058-61148077 | MS.gene059592:CDS | 35.0% | |
| ATTCCATTCCACAAAGATGT+GGG | + | chr6.4:61147333-61147352 | MS.gene059592:intron | 35.0% | |
| GGCACAAATAACATATACTC+TGG | - | chr6.4:61145991-61146010 | None:intergenic | 35.0% | |
| GTCATAAACCAGAAATGAGT+GGG | - | chr6.4:61147655-61147674 | None:intergenic | 35.0% | |
| TACGAAAGCCAGAACTAAAA+GGG | - | chr6.4:61145943-61145962 | None:intergenic | 35.0% | |
| TATTCCATTCCACAAAGATG+TGG | + | chr6.4:61147332-61147351 | MS.gene059592:intron | 35.0% | |
| TCATAAACCAGAAATGAGTG+GGG | - | chr6.4:61147654-61147673 | None:intergenic | 35.0% | |
| TCGTCTTACTTGGAGTAAAA+AGG | + | chr6.4:61148112-61148131 | MS.gene059592:intron | 35.0% | |
| TGTCATAAACCAGAAATGAG+TGG | - | chr6.4:61147656-61147675 | None:intergenic | 35.0% | |
| TTCCAGTTTAAATCATCAGG+CGG | + | chr6.4:61148047-61148066 | MS.gene059592:CDS | 35.0% | |
| TTGTCAAGTATCTGCTATAG+CGG | + | chr6.4:61145512-61145531 | MS.gene059592:intron | 35.0% | |
| ! | CGTGATACCAAACATACTTT+TGG | + | chr6.4:61145115-61145134 | MS.gene059592:intron | 35.0% |
| ! | TGCATGGTTTACTGTGATTT+TGG | + | chr6.4:61145083-61145102 | MS.gene059592:intron | 35.0% |
| ! | TTGATTTTCTGTTGTGTTGC+AGG | + | chr6.4:61145161-61145180 | MS.gene059592:intron | 35.0% |
| !! | ACTCATTTCTGGTTTATGAC+AGG | + | chr6.4:61147655-61147674 | MS.gene059592:intron | 35.0% |
| !! | CAACATCAAGACAGTTTTGA+GGG | - | chr6.4:61145897-61145916 | None:intergenic | 35.0% |
| !! | CTTGCTATTGTTATTGTTGC+TGG | + | chr6.4:61145717-61145736 | MS.gene059592:intron | 35.0% |
| !! | GAAAGTATCAACTCCTATTG+AGG | + | chr6.4:61146967-61146986 | MS.gene059592:CDS | 35.0% |
| !! | GAATGTTGGTTCATTTGGTA+TGG | + | chr6.4:61147299-61147318 | MS.gene059592:intron | 35.0% |
| !! | GAGGATCTTTTTGTTTACTG+TGG | + | chr6.4:61145860-61145879 | MS.gene059592:CDS | 35.0% |
| !! | GTGCTTGTTATGGATTTGTT+GGG | + | chr6.4:61145827-61145846 | MS.gene059592:CDS | 35.0% |
| !! | TATCCGGTTTTATATCCCTA+TGG | - | chr6.4:61146139-61146158 | None:intergenic | 35.0% |
| !! | TGCTTGTTATGGATTTGTTG+GGG | + | chr6.4:61145828-61145847 | MS.gene059592:CDS | 35.0% |
| !! | TGTGCTTGTTATGGATTTGT+TGG | + | chr6.4:61145826-61145845 | MS.gene059592:CDS | 35.0% |
| !!! | TTCTCCCCTCTTTTTTTTAC+CGG | + | chr6.4:61146438-61146457 | MS.gene059592:intron | 35.0% |
| AAAGCCAGAACTAAAAGGGA+TGG | - | chr6.4:61145939-61145958 | None:intergenic | 40.0% | |
| AAGCATGTTTGGTATCACCA+TGG | - | chr6.4:61144641-61144660 | None:intergenic | 40.0% | |
| AAGCCAGAACTAAAAGGGAT+GGG | - | chr6.4:61145938-61145957 | None:intergenic | 40.0% | |
| AAGTACGAAGCAAACTCTAC+AGG | - | chr6.4:61147092-61147111 | None:intergenic | 40.0% | |
| ACATTCATCCGACTACTTGA+AGG | - | chr6.4:61148398-61148417 | None:intergenic | 40.0% | |
| ACCAGAATCACAGTATCTTG+AGG | - | chr6.4:61144614-61144633 | None:intergenic | 40.0% | |
| ACCATGAGATACTGTGATTC+TGG | + | chr6.4:61144748-61144767 | MS.gene059592:intron | 40.0% | |
| ACCTCAAGATACTGTGATTC+TGG | + | chr6.4:61144610-61144629 | MS.gene059592:intron | 40.0% | |
| AGCTCAAGGAATGACAGAAT+CGG | - | chr6.4:61146244-61146263 | None:intergenic | 40.0% | |
| AGGTCAAAGAATGGCAGTAA+TGG | - | chr6.4:61147115-61147134 | None:intergenic | 40.0% | |
| AGGTGTTCCTGTATTTACTC+TGG | + | chr6.4:61145487-61145506 | MS.gene059592:intron | 40.0% | |
| AGTCCCATGAGAAAGTTATC+CGG | - | chr6.4:61146155-61146174 | None:intergenic | 40.0% | |
| ATAACACATATTGAGCCTGC+GGG | + | chr6.4:61147443-61147462 | MS.gene059592:intron | 40.0% | |
| ATAAGATGGAGTGGTGTAGA+CGG | + | chr6.4:61145794-61145813 | MS.gene059592:CDS | 40.0% | |
| ATAATCAGGTCGCTGATCAA+AGG | - | chr6.4:61147135-61147154 | None:intergenic | 40.0% | |
| ATGTGATTATGATGCCAAGC+GGG | + | chr6.4:61146022-61146041 | MS.gene059592:intron | 40.0% | |
| ATGTGTTATGGAAAGCCTCA+AGG | - | chr6.4:61147432-61147451 | None:intergenic | 40.0% | |
| CAAGCTGCAATACTCATCTT+GGG | + | chr6.4:61146615-61146634 | MS.gene059592:CDS | 40.0% | |
| CAATGTTGTCAATCGCAGAT+TGG | - | chr6.4:61145648-61145667 | None:intergenic | 40.0% | |
| CATAACACATATTGAGCCTG+CGG | + | chr6.4:61147442-61147461 | MS.gene059592:intron | 40.0% | |
| CATGTGATTATGATGCCAAG+CGG | + | chr6.4:61146021-61146040 | MS.gene059592:intron | 40.0% | |
| CCAAATGAACCAACATTCGT+TGG | - | chr6.4:61147297-61147316 | None:intergenic | 40.0% | |
| CCTCAAAACTGTCTTGATGT+TGG | + | chr6.4:61145895-61145914 | MS.gene059592:CDS | 40.0% | |
| CCTCCATAGGGATATAAAAC+CGG | + | chr6.4:61146133-61146152 | MS.gene059592:CDS | 40.0% | |
| CTACGAAAGCCAGAACTAAA+AGG | - | chr6.4:61145944-61145963 | None:intergenic | 40.0% | |
| CTGTGATTCTGGTATATCCA+TGG | + | chr6.4:61144621-61144640 | MS.gene059592:intron | 40.0% | |
| CTTGAGGTTCACTGTAATTC+TGG | - | chr6.4:61144598-61144617 | None:intergenic | 40.0% | |
| GACAACACCAGAGTAAATAC+AGG | - | chr6.4:61145497-61145516 | None:intergenic | 40.0% | |
| GACCTGATTATGGATTCTTG+AGG | + | chr6.4:61147144-61147163 | MS.gene059592:CDS | 40.0% | |
| GAGCAAATAACTCCCGAAAT+AGG | - | chr6.4:61147172-61147191 | None:intergenic | 40.0% | |
| GATAACTTTCTCATGGGACT+TGG | + | chr6.4:61146155-61146174 | MS.gene059592:CDS | 40.0% | |
| GATTTGAGGACTCTGATAGT+GGG | + | chr6.4:61147372-61147391 | MS.gene059592:intron | 40.0% | |
| GCTGATCAAAGGTCAAAGAA+TGG | - | chr6.4:61147124-61147143 | None:intergenic | 40.0% | |
| GGGAGAACAAAAACTTAACC+GGG | + | chr6.4:61146579-61146598 | MS.gene059592:intron | 40.0% | |
| TACCGCCTGATGATTTAAAC+TGG | - | chr6.4:61148052-61148071 | None:intergenic | 40.0% | |
| TATTTGTAGAACAAAGCCGC+CGG | + | chr6.4:61146718-61146737 | MS.gene059592:intron | 40.0% | |
| TCCTTCGGTGAAATCTATCT+CGG | + | chr6.4:61144331-61144350 | MS.gene059592:CDS | 40.0% | |
| TGAGTGGGGATGTTACATTT+CGG | - | chr6.4:61147640-61147659 | None:intergenic | 40.0% | |
| TGATTTGAGGACTCTGATAG+TGG | + | chr6.4:61147371-61147390 | MS.gene059592:intron | 40.0% | |
| TGCAATACTCATCTTGGGAT+TGG | + | chr6.4:61146620-61146639 | MS.gene059592:CDS | 40.0% | |
| TTCAAAACCTGTATGGGATG+TGG | - | chr6.4:61146377-61146396 | None:intergenic | 40.0% | |
| TTGGGCTTGCAAAACGATAT+CGG | + | chr6.4:61146334-61146353 | MS.gene059592:CDS | 40.0% | |
| TTTGATCAGCGACCTGATTA+TGG | + | chr6.4:61147134-61147153 | MS.gene059592:CDS | 40.0% | |
| ! | ACTCTTTCGAAGCATCAAGA+AGG | + | chr6.4:61148300-61148319 | MS.gene059592:CDS | 40.0% |
| ! | ATTCTAAAGGGTTCCTCCAT+AGG | + | chr6.4:61146120-61146139 | MS.gene059592:CDS | 40.0% |
| ! | CCAACATCAAGACAGTTTTG+AGG | - | chr6.4:61145898-61145917 | None:intergenic | 40.0% |
| ! | CGAAAGAGTGTGAAGTAGAA+GGG | - | chr6.4:61148289-61148308 | None:intergenic | 40.0% |
| ! | CGGGAAGTGTGCATTTATAA+AGG | + | chr6.4:61146041-61146060 | MS.gene059592:intron | 40.0% |
| ! | CTTGATGTTGGCTGATCAAA+TGG | + | chr6.4:61145907-61145926 | MS.gene059592:CDS | 40.0% |
| ! | GGAAGACAATGTGCTTGTTA+TGG | + | chr6.4:61145817-61145836 | MS.gene059592:CDS | 40.0% |
| ! | TAATTGTGTTTAGCCTTCCC+TGG | + | chr6.4:61146891-61146910 | MS.gene059592:intron | 40.0% |
| ! | TCGAAAGAGTGTGAAGTAGA+AGG | - | chr6.4:61148290-61148309 | None:intergenic | 40.0% |
| ! | TTCAAGTTAGGACGCAAGAT+CGG | + | chr6.4:61144301-61144320 | MS.gene059592:CDS | 40.0% |
| ! | TTCTAAAGGGTTCCTCCATA+GGG | + | chr6.4:61146121-61146140 | MS.gene059592:CDS | 40.0% |
| ! | TTGGCTTCTGAGAATCATCT+TGG | + | chr6.4:61148077-61148096 | MS.gene059592:CDS | 40.0% |
| ! | TTTTGTACTTCCTCAGAGGA+AGG | + | chr6.4:61146769-61146788 | MS.gene059592:CDS | 40.0% |
| !! | CCAACGAATGTTGGTTCATT+TGG | + | chr6.4:61147294-61147313 | MS.gene059592:intron | 40.0% |
| !! | TGCATGTTTGGTGTCAGAAA+TGG | + | chr6.4:61145029-61145048 | MS.gene059592:intron | 40.0% |
| AAGATCGGAAGTGGATCCTT+CGG | + | chr6.4:61144316-61144335 | MS.gene059592:CDS | 45.0% | |
| AAGCTGCAAACCATAGGCAT+GGG | + | chr6.4:61148351-61148370 | MS.gene059592:CDS | 45.0% | |
| AATCACCAGCCAACGAATGT+TGG | + | chr6.4:61147285-61147304 | MS.gene059592:intron | 45.0% | |
| ACACCACTCCATCTTATGCT+TGG | - | chr6.4:61145791-61145810 | None:intergenic | 45.0% | |
| ACCGAGATAGATTTCACCGA+AGG | - | chr6.4:61144335-61144354 | None:intergenic | 45.0% | |
| ACGAAGCAAACTCTACAGGA+TGG | - | chr6.4:61147088-61147107 | None:intergenic | 45.0% | |
| ACTTACGGATATGTGAGGCT+GGG | - | chr6.4:61147746-61147765 | None:intergenic | 45.0% | |
| AGCCAGAACTAAAAGGGATG+GGG | - | chr6.4:61145937-61145956 | None:intergenic | 45.0% | |
| ATAAATGCACACTTCCCGCT+TGG | - | chr6.4:61146039-61146058 | None:intergenic | 45.0% | |
| ATCCCAAGCATAAGATGGAG+TGG | + | chr6.4:61145785-61145804 | MS.gene059592:CDS | 45.0% | |
| ATGAACCAACATTCGTTGGC+TGG | - | chr6.4:61147293-61147312 | None:intergenic | 45.0% | |
| ATGCCTTGCTACTGAATCTG+CGG | + | chr6.4:61148139-61148158 | MS.gene059592:intron | 45.0% | |
| ATTTGTAGAACAAAGCCGCC+GGG | + | chr6.4:61146719-61146738 | MS.gene059592:intron | 45.0% | |
| CAAGAGACTCCAAATCATCC+CGG | - | chr6.4:61146740-61146759 | None:intergenic | 45.0% | |
| CACCACTCCATCTTATGCTT+GGG | - | chr6.4:61145790-61145809 | None:intergenic | 45.0% | |
| CATTCGAACCCACATCTTTG+TGG | - | chr6.4:61147344-61147363 | None:intergenic | 45.0% | |
| CGAAGCAAACTCTACAGGAT+GGG | - | chr6.4:61147087-61147106 | None:intergenic | 45.0% | |
| CGCAGGCTCAATATGTGTTA+TGG | - | chr6.4:61147444-61147463 | None:intergenic | 45.0% | |
| CGCCTCAAGAATCCATAATC+AGG | - | chr6.4:61147149-61147168 | None:intergenic | 45.0% | |
| CTCATGGTTCACTGTGATTC+TGG | - | chr6.4:61144736-61144755 | None:intergenic | 45.0% | |
| GAACCCACATCTTTGTGGAA+TGG | - | chr6.4:61147339-61147358 | None:intergenic | 45.0% | |
| GAACTTAACACCGGAAGAAG+CGG | - | chr6.4:61148030-61148049 | None:intergenic | 45.0% | |
| GATGAGAAGAGCAGAGGTAA+AGG | - | chr6.4:61146514-61146533 | None:intergenic | 45.0% | |
| GATTCTGTCATTCCTTGAGC+TGG | + | chr6.4:61146243-61146262 | MS.gene059592:intron | 45.0% | |
| GCAAGCTGCAATACTCATCT+TGG | + | chr6.4:61146614-61146633 | MS.gene059592:CDS | 45.0% | |
| GCCAGAATCACAGTATCTCA+TGG | - | chr6.4:61144752-61144771 | None:intergenic | 45.0% | |
| GGCTCAATAAGCGCTTATAG+AGG | - | chr6.4:61147411-61147430 | None:intergenic | 45.0% | |
| GTAACATCCCCACTCATTTC+TGG | + | chr6.4:61147644-61147663 | MS.gene059592:intron | 45.0% | |
| GTGATTCTGGCATATCCACT+GGG | + | chr6.4:61144761-61144780 | MS.gene059592:intron | 45.0% | |
| GTGCTTGTGTTGTACATGTC+AGG | + | chr6.4:61146296-61146315 | MS.gene059592:intron | 45.0% | |
| GTGGTATCCCAAGCATAAGA+TGG | + | chr6.4:61145780-61145799 | MS.gene059592:CDS | 45.0% | |
| GTGTGTGTGTGTGTGTAGAT+TGG | + | chr6.4:61147774-61147793 | MS.gene059592:intron | 45.0% | |
| TAAGATGGAGTGGTGTAGAC+GGG | + | chr6.4:61145795-61145814 | MS.gene059592:CDS | 45.0% | |
| TAAGCGCTTATTGAGCCTTG+AGG | + | chr6.4:61147414-61147433 | MS.gene059592:intron | 45.0% | |
| TACTTACGGATATGTGAGGC+TGG | - | chr6.4:61147747-61147766 | None:intergenic | 45.0% | |
| TACTTCCTCAGAGGAAGGTA+TGG | + | chr6.4:61146774-61146793 | MS.gene059592:intron | 45.0% | |
| TCGATGAAACAACCAGCTCA+AGG | - | chr6.4:61146258-61146277 | None:intergenic | 45.0% | |
| TGGGCTTGCAAAACGATATC+GGG | + | chr6.4:61146335-61146354 | MS.gene059592:CDS | 45.0% | |
| TGTGATTCTGGCATATCCAC+TGG | + | chr6.4:61144760-61144779 | MS.gene059592:intron | 45.0% | |
| TTATACAGGGGATGTCTCAG+CGG | + | chr6.4:61147983-61148002 | MS.gene059592:intron | 45.0% | |
| TTCCTGTAGCGAGCAACAAT+CGG | + | chr6.4:61147850-61147869 | MS.gene059592:CDS | 45.0% | |
| TTGTTACCGCAGTGCATGTT+TGG | + | chr6.4:61145017-61145036 | MS.gene059592:intron | 45.0% | |
| ! | ACTTTCTCATGGGACTTGGT+CGG | + | chr6.4:61146159-61146178 | MS.gene059592:CDS | 45.0% |
| ! | ATTCTTGAGGCGCCTATTTC+GGG | + | chr6.4:61147157-61147176 | MS.gene059592:CDS | 45.0% |
| ! | CATTCGTTGGCTGGTGATTT+AGG | - | chr6.4:61147284-61147303 | None:intergenic | 45.0% |
| ! | CTCTACTCTTTTGTGACTGC+TGG | - | chr6.4:61147723-61147742 | None:intergenic | 45.0% |
| ! | GATTCTTGAGGCGCCTATTT+CGG | + | chr6.4:61147156-61147175 | MS.gene059592:CDS | 45.0% |
| ! | GTGCTTTTGTACTTCCTCAG+AGG | + | chr6.4:61146765-61146784 | MS.gene059592:CDS | 45.0% |
| !! | CCGGTTTTATATCCCTATGG+AGG | - | chr6.4:61146136-61146155 | None:intergenic | 45.0% |
| !! | AAATTATTTATTTATGTTAT+TGG | + | chr6.4:61144822-61144841 | MS.gene059592:intron | 5.0% |
| !!! | TTCATTTTTTTTATTATTAT+TGG | + | chr6.4:61144383-61144402 | MS.gene059592:intron | 5.0% |
| AAGATGGAGTGGTGTAGACG+GGG | + | chr6.4:61145796-61145815 | MS.gene059592:CDS | 50.0% | |
| CAAACCATAGGCATGGGCAA+GGG | + | chr6.4:61148357-61148376 | MS.gene059592:CDS | 50.0% | |
| CAGAGTCCTCAAATCAGCCA+CGG | - | chr6.4:61147367-61147386 | None:intergenic | 50.0% | |
| CCACTGAAGCTGCAAACCAT+AGG | + | chr6.4:61148345-61148364 | MS.gene059592:CDS | 50.0% | |
| CCTTCCCTGGCAAAACCTAA+AGG | + | chr6.4:61146904-61146923 | MS.gene059592:CDS | 50.0% | |
| CGGGAGTTATTTGCTCGAGA+AGG | + | chr6.4:61147176-61147195 | MS.gene059592:CDS | 50.0% | |
| CTAAGGGATGAGAAGAGCAG+AGG | - | chr6.4:61146520-61146539 | None:intergenic | 50.0% | |
| CTGACACCAAACATGCACTG+CGG | - | chr6.4:61145026-61145045 | None:intergenic | 50.0% | |
| CTTGACAGCAACGATCTCGA+AGG | - | chr6.4:61144469-61144488 | None:intergenic | 50.0% | |
| GAAGCTGCAAACCATAGGCA+TGG | + | chr6.4:61148350-61148369 | MS.gene059592:CDS | 50.0% | |
| GAATGCCATACCTTCCTCTG+AGG | - | chr6.4:61146782-61146801 | None:intergenic | 50.0% | |
| GCCAGAACTAAAAGGGATGG+GGG | - | chr6.4:61145936-61145955 | None:intergenic | 50.0% | |
| GCTTCTTTGTCGCAGCCTTT+AGG | - | chr6.4:61146922-61146941 | None:intergenic | 50.0% | |
| GGGCAAGGGAGCAGTAAAAT+TGG | + | chr6.4:61148371-61148390 | MS.gene059592:CDS | 50.0% | |
| GGGCAGATGCTTACCTCAAT+AGG | - | chr6.4:61146983-61147002 | None:intergenic | 50.0% | |
| GGTTCAAGCACCAACCTTGT+TGG | - | chr6.4:61147899-61147918 | None:intergenic | 50.0% | |
| GTTCCGCAGATTCAGTAGCA+AGG | - | chr6.4:61148145-61148164 | None:intergenic | 50.0% | |
| TCCTGTAGCGAGCAACAATC+GGG | + | chr6.4:61147851-61147870 | MS.gene059592:CDS | 50.0% | |
| TCTGTTGTGTTGCAGGAGAC+TGG | + | chr6.4:61145168-61145187 | MS.gene059592:intron | 50.0% | |
| TTAGGACGCAAGATCGGAAG+TGG | + | chr6.4:61144307-61144326 | MS.gene059592:CDS | 50.0% | |
| TTGTTGCTCGCTACAGGAAC+CGG | - | chr6.4:61147849-61147868 | None:intergenic | 50.0% | |
| ! | CCTATGGTTTGCAGCTTCAG+TGG | - | chr6.4:61148348-61148367 | None:intergenic | 50.0% |
| ! | CGGGATGATTTGGAGTCTCT+TGG | + | chr6.4:61146738-61146757 | MS.gene059592:CDS | 50.0% |
| ! | TCAGACAATGCCGCTTCTTC+CGG | + | chr6.4:61148017-61148036 | MS.gene059592:CDS | 50.0% |
| !! | CCTTTAGGTTTTGCCAGGGA+AGG | - | chr6.4:61146907-61146926 | None:intergenic | 50.0% |
| !! | GCAGCCTTTAGGTTTTGCCA+GGG | - | chr6.4:61146911-61146930 | None:intergenic | 50.0% |
| !! | TTTGTTGGGGCCTAGTCTTG+AGG | + | chr6.4:61145841-61145860 | MS.gene059592:CDS | 50.0% |
| !!! | ACCCCCATCCCTTTTAGTTC+TGG | + | chr6.4:61145932-61145951 | MS.gene059592:intron | 50.0% |
| ACAAAGCCGCCGGGATGATT+TGG | + | chr6.4:61146728-61146747 | MS.gene059592:CDS | 55.0% | |
| ACTTGGTCGGAAGGCAAACC+TGG | + | chr6.4:61146172-61146191 | MS.gene059592:CDS | 55.0% | |
| AGATGTGGGTTCGAATGCCG+TGG | + | chr6.4:61147347-61147366 | MS.gene059592:intron | 55.0% | |
| CAACAATCGGGCAATGCCCA+TGG | + | chr6.4:61147863-61147882 | MS.gene059592:CDS | 55.0% | |
| CCAATCGCCACATCCCATAC+AGG | + | chr6.4:61146367-61146386 | MS.gene059592:CDS | 55.0% | |
| CCTGTATGGGATGTGGCGAT+TGG | - | chr6.4:61146370-61146389 | None:intergenic | 55.0% | |
| GAGACTCCAAATCATCCCGG+CGG | - | chr6.4:61146737-61146756 | None:intergenic | 55.0% | |
| GCAAACCATAGGCATGGGCA+AGG | + | chr6.4:61148356-61148375 | MS.gene059592:CDS | 55.0% | |
| GTTTGCAGCTTCAGTGGACG+CGG | - | chr6.4:61148342-61148361 | None:intergenic | 55.0% | |
| ! | TCTCATGGGACTTGGTCGGA+AGG | + | chr6.4:61146163-61146182 | MS.gene059592:CDS | 55.0% |
| ! | TGGGATGTGGCGATTGGTTG+TGG | - | chr6.4:61146364-61146383 | None:intergenic | 55.0% |
| !! | CGAATGCCGTGGCTGATTTG+AGG | + | chr6.4:61147358-61147377 | MS.gene059592:intron | 55.0% |
| !! | CGCAGCCTTTAGGTTTTGCC+AGG | - | chr6.4:61146912-61146931 | None:intergenic | 55.0% |
| !! | CTATAGCGGTGCTATAGCGC+TGG | + | chr6.4:61145526-61145545 | MS.gene059592:intron | 55.0% |
| !! | TTAGGTGGATTGAGTCCCGC+AGG | - | chr6.4:61147461-61147480 | None:intergenic | 55.0% |
| AGTGGACGCGGAAGGCTTCA+AGG | - | chr6.4:61148330-61148349 | None:intergenic | 60.0% | |
| GCCCGATTGTTGCTCGCTAC+AGG | - | chr6.4:61147855-61147874 | None:intergenic | 60.0% | |
| GCTTGCATAACGCGCAGTCC+CGG | - | chr6.4:61146600-61146619 | None:intergenic | 60.0% | |
| TGCTCCCTTGCCCATGCCTA+TGG | - | chr6.4:61148364-61148383 | None:intergenic | 60.0% | |
| GCAGCTTCAGTGGACGCGGA+AGG | - | chr6.4:61148338-61148357 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 61144277 | 61148442 | 61144277 | ID=MS.gene059592 |
| chr6.4 | mRNA | 61144277 | 61148442 | 61144277 | ID=MS.gene059592.t1;Parent=MS.gene059592 |
| chr6.4 | exon | 61144277 | 61144352 | 61144277 | ID=MS.gene059592.t1.exon1;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61144277 | 61144352 | 61144277 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| chr6.4 | exon | 61144451 | 61144491 | 61144451 | ID=MS.gene059592.t1.exon2;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61144451 | 61144491 | 61144451 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| chr6.4 | exon | 61145183 | 61145252 | 61145183 | ID=MS.gene059592.t1.exon3;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61145183 | 61145252 | 61145183 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| chr6.4 | exon | 61145780 | 61145928 | 61145780 | ID=MS.gene059592.t1.exon4;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61145780 | 61145928 | 61145780 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| chr6.4 | exon | 61146098 | 61146193 | 61146098 | ID=MS.gene059592.t1.exon5;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61146098 | 61146193 | 61146098 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| chr6.4 | exon | 61146318 | 61146388 | 61146318 | ID=MS.gene059592.t1.exon6;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61146318 | 61146388 | 61146318 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| chr6.4 | exon | 61146580 | 61146641 | 61146580 | ID=MS.gene059592.t1.exon7;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61146580 | 61146641 | 61146580 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| chr6.4 | exon | 61146727 | 61146790 | 61146727 | ID=MS.gene059592.t1.exon8;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61146727 | 61146790 | 61146727 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| chr6.4 | exon | 61146904 | 61146988 | 61146904 | ID=MS.gene059592.t1.exon9;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61146904 | 61146988 | 61146904 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| chr6.4 | exon | 61147071 | 61147197 | 61147071 | ID=MS.gene059592.t1.exon10;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61147071 | 61147197 | 61147071 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| chr6.4 | exon | 61147677 | 61147759 | 61147677 | ID=MS.gene059592.t1.exon11;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61147677 | 61147759 | 61147677 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| chr6.4 | exon | 61147846 | 61147903 | 61147846 | ID=MS.gene059592.t1.exon12;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61147846 | 61147903 | 61147846 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| chr6.4 | exon | 61147991 | 61148106 | 61147991 | ID=MS.gene059592.t1.exon13;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61147991 | 61148106 | 61147991 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| chr6.4 | exon | 61148266 | 61148442 | 61148266 | ID=MS.gene059592.t1.exon14;Parent=MS.gene059592.t1 |
| chr6.4 | CDS | 61148266 | 61148442 | 61148266 | ID=cds.MS.gene059592.t1;Parent=MS.gene059592.t1 |
| Gene Sequence |
| Protein sequence |
