Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004844.t1 | XP_003590848.2 | 98.9 | 464 | 5 | 0 | 1 | 464 | 1 | 464 | 2.70E-238 | 834.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004844.t1 | Q9LW62 | 72.0 | 464 | 107 | 5 | 2 | 464 | 1 | 442 | 2.9e-188 | 659.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004844.t1 | G7I4W3 | 98.9 | 464 | 5 | 0 | 1 | 464 | 1 | 464 | 1.9e-238 | 834.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004844.t1 | MTR_1g075870 | 98.922 | 464 | 5 | 0 | 1 | 464 | 1 | 464 | 0.0 | 945 |
MS.gene004844.t1 | MTR_1g042280 | 86.452 | 465 | 55 | 3 | 1 | 464 | 1 | 458 | 0.0 | 768 |
MS.gene004844.t1 | MTR_7g097160 | 76.840 | 462 | 101 | 5 | 2 | 458 | 1 | 461 | 0.0 | 703 |
MS.gene004844.t1 | MTR_1g075870 | 98.466 | 326 | 5 | 0 | 1 | 326 | 1 | 326 | 0.0 | 677 |
MS.gene004844.t1 | MTR_1g069720 | 72.451 | 461 | 114 | 8 | 2 | 458 | 1 | 452 | 0.0 | 671 |
MS.gene004844.t1 | MTR_1g042280 | 93.031 | 287 | 20 | 0 | 41 | 327 | 9 | 295 | 0.0 | 569 |
MS.gene004844.t1 | MTR_1g075870 | 98.889 | 270 | 3 | 0 | 58 | 327 | 1 | 270 | 0.0 | 566 |
MS.gene004844.t1 | MTR_0492s0030 | 75.000 | 368 | 84 | 3 | 2 | 366 | 1 | 363 | 0.0 | 560 |
MS.gene004844.t1 | MTR_0543s0020 | 75.000 | 368 | 84 | 3 | 2 | 366 | 1 | 363 | 0.0 | 560 |
MS.gene004844.t1 | MTR_2g099670 | 60.421 | 475 | 171 | 7 | 2 | 462 | 1 | 472 | 0.0 | 545 |
MS.gene004844.t1 | MTR_8g018310 | 59.916 | 479 | 158 | 9 | 2 | 458 | 1 | 467 | 0.0 | 536 |
MS.gene004844.t1 | MTR_4g126010 | 77.143 | 315 | 68 | 2 | 2 | 316 | 1 | 311 | 0.0 | 531 |
MS.gene004844.t1 | MTR_8g018310 | 80.471 | 297 | 57 | 1 | 2 | 298 | 1 | 296 | 0.0 | 518 |
MS.gene004844.t1 | MTR_8g102930 | 59.954 | 432 | 150 | 7 | 2 | 423 | 1 | 419 | 1.66e-179 | 509 |
MS.gene004844.t1 | MTR_6g087070 | 60.373 | 429 | 148 | 8 | 2 | 420 | 1 | 417 | 3.45e-179 | 508 |
MS.gene004844.t1 | MTR_2g039930 | 59.712 | 417 | 149 | 7 | 2 | 417 | 1 | 399 | 1.79e-173 | 495 |
MS.gene004844.t1 | MTR_1g004990 | 66.242 | 314 | 106 | 0 | 2 | 315 | 1 | 314 | 1.39e-160 | 461 |
MS.gene004844.t1 | MTR_3g110180 | 54.005 | 437 | 178 | 5 | 2 | 422 | 1 | 430 | 1.05e-159 | 459 |
MS.gene004844.t1 | MTR_3g110180 | 54.005 | 437 | 177 | 6 | 2 | 422 | 1 | 429 | 3.19e-158 | 455 |
MS.gene004844.t1 | MTR_2g099670 | 57.971 | 414 | 157 | 7 | 63 | 462 | 10 | 420 | 1.05e-155 | 448 |
MS.gene004844.t1 | MTR_7g097160 | 69.592 | 319 | 91 | 5 | 145 | 458 | 25 | 342 | 3.81e-145 | 418 |
MS.gene004844.t1 | MTR_2g039930 | 75.926 | 216 | 52 | 0 | 83 | 298 | 1 | 216 | 1.14e-128 | 378 |
MS.gene004844.t1 | MTR_7g006030 | 39.100 | 289 | 157 | 6 | 6 | 278 | 31 | 316 | 2.13e-58 | 202 |
MS.gene004844.t1 | MTR_3g110240 | 39.068 | 279 | 157 | 6 | 6 | 274 | 115 | 390 | 1.31e-55 | 196 |
MS.gene004844.t1 | MTR_1g007150 | 37.993 | 279 | 160 | 6 | 6 | 274 | 118 | 393 | 3.75e-55 | 195 |
MS.gene004844.t1 | MTR_7g085540 | 37.943 | 282 | 159 | 5 | 10 | 278 | 147 | 425 | 8.17e-55 | 194 |
MS.gene004844.t1 | MTR_1g116210 | 37.676 | 284 | 163 | 6 | 6 | 278 | 113 | 393 | 1.74e-54 | 193 |
MS.gene004844.t1 | MTR_8g014050 | 36.879 | 282 | 156 | 6 | 10 | 274 | 128 | 404 | 1.13e-49 | 180 |
MS.gene004844.t1 | MTR_7g116400 | 64.179 | 67 | 23 | 1 | 81 | 146 | 1 | 67 | 1.98e-21 | 89.0 |
MS.gene004844.t1 | MTR_5g007590 | 46.667 | 75 | 32 | 1 | 72 | 146 | 53 | 119 | 4.35e-14 | 69.3 |
MS.gene004844.t1 | MTR_5g022030 | 25.455 | 220 | 147 | 6 | 9 | 220 | 98 | 308 | 6.35e-13 | 71.2 |
MS.gene004844.t1 | MTR_5g022030 | 25.455 | 220 | 147 | 6 | 9 | 220 | 98 | 308 | 8.66e-13 | 70.9 |
MS.gene004844.t1 | MTR_7g106710 | 27.189 | 217 | 134 | 9 | 10 | 216 | 135 | 337 | 6.96e-12 | 67.4 |
MS.gene004844.t1 | MTR_7g106710 | 27.189 | 217 | 134 | 9 | 10 | 216 | 135 | 337 | 1.41e-11 | 67.0 |
MS.gene004844.t1 | MTR_7g106710 | 27.189 | 217 | 134 | 9 | 10 | 216 | 135 | 337 | 2.01e-11 | 66.6 |
MS.gene004844.t1 | MTR_7g106710 | 27.189 | 217 | 134 | 9 | 10 | 216 | 135 | 337 | 2.71e-11 | 66.2 |
MS.gene004844.t1 | MTR_3g099920 | 27.511 | 229 | 112 | 8 | 10 | 214 | 19 | 217 | 3.12e-11 | 65.9 |
MS.gene004844.t1 | MTR_4g132860 | 26.241 | 282 | 178 | 10 | 12 | 282 | 82 | 344 | 3.44e-11 | 65.1 |
MS.gene004844.t1 | MTR_1g101630 | 24.809 | 262 | 167 | 8 | 9 | 251 | 40 | 290 | 3.94e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004844.t1 | AT3G23340 | 75.862 | 464 | 89 | 6 | 2 | 464 | 1 | 442 | 0.0 | 713 |
MS.gene004844.t1 | AT4G14340 | 74.249 | 466 | 101 | 5 | 2 | 464 | 7 | 456 | 0.0 | 710 |
MS.gene004844.t1 | AT4G28540 | 73.950 | 476 | 102 | 9 | 2 | 458 | 5 | 477 | 0.0 | 687 |
MS.gene004844.t1 | AT5G43320 | 71.933 | 481 | 116 | 8 | 2 | 464 | 1 | 480 | 0.0 | 686 |
MS.gene004844.t1 | AT3G23340 | 73.276 | 464 | 87 | 7 | 2 | 464 | 1 | 428 | 0.0 | 679 |
MS.gene004844.t1 | AT1G04440 | 71.338 | 471 | 124 | 7 | 2 | 464 | 1 | 468 | 0.0 | 664 |
MS.gene004844.t1 | AT1G03930 | 73.093 | 472 | 109 | 4 | 2 | 458 | 1 | 469 | 0.0 | 657 |
MS.gene004844.t1 | AT5G44100 | 72.479 | 476 | 110 | 6 | 2 | 458 | 1 | 474 | 0.0 | 628 |
MS.gene004844.t1 | AT5G44100 | 72.479 | 476 | 110 | 6 | 2 | 458 | 1 | 474 | 0.0 | 628 |
MS.gene004844.t1 | AT4G14340 | 84.404 | 327 | 50 | 1 | 2 | 327 | 7 | 333 | 0.0 | 597 |
MS.gene004844.t1 | AT5G43320 | 80.655 | 336 | 54 | 2 | 2 | 329 | 1 | 333 | 0.0 | 567 |
MS.gene004844.t1 | AT5G43320 | 80.655 | 336 | 54 | 2 | 2 | 329 | 1 | 333 | 0.0 | 567 |
MS.gene004844.t1 | AT1G72710 | 69.474 | 380 | 106 | 4 | 2 | 374 | 1 | 377 | 0.0 | 544 |
MS.gene004844.t1 | AT4G26100 | 63.158 | 437 | 146 | 9 | 2 | 433 | 1 | 427 | 0.0 | 532 |
MS.gene004844.t1 | AT5G57015 | 72.619 | 336 | 87 | 3 | 2 | 337 | 1 | 331 | 0.0 | 521 |
MS.gene004844.t1 | AT2G19470 | 74.839 | 310 | 75 | 1 | 2 | 311 | 1 | 307 | 0.0 | 517 |
MS.gene004844.t1 | AT4G28880 | 60.386 | 414 | 139 | 6 | 2 | 395 | 1 | 409 | 2.50e-176 | 500 |
MS.gene004844.t1 | AT4G28880 | 60.386 | 414 | 139 | 6 | 2 | 395 | 1 | 409 | 2.50e-176 | 500 |
MS.gene004844.t1 | AT4G28880 | 60.386 | 414 | 139 | 6 | 2 | 395 | 1 | 409 | 2.50e-176 | 500 |
MS.gene004844.t1 | AT4G28880 | 60.386 | 414 | 139 | 6 | 2 | 395 | 1 | 409 | 2.50e-176 | 500 |
MS.gene004844.t1 | AT4G28860 | 70.717 | 321 | 89 | 2 | 2 | 322 | 1 | 316 | 6.54e-175 | 495 |
MS.gene004844.t1 | AT4G28860 | 70.717 | 321 | 89 | 2 | 2 | 322 | 1 | 316 | 3.28e-174 | 495 |
MS.gene004844.t1 | AT4G08800 | 64.430 | 298 | 74 | 2 | 2 | 299 | 1 | 266 | 2.76e-143 | 411 |
MS.gene004844.t1 | AT2G25760 | 40.000 | 280 | 153 | 4 | 10 | 274 | 107 | 386 | 3.92e-60 | 209 |
MS.gene004844.t1 | AT2G25760 | 39.643 | 280 | 151 | 5 | 10 | 274 | 107 | 383 | 2.08e-57 | 201 |
MS.gene004844.t1 | AT3G13670 | 36.678 | 289 | 164 | 6 | 6 | 278 | 131 | 416 | 2.12e-54 | 193 |
MS.gene004844.t1 | AT5G18190 | 37.234 | 282 | 161 | 5 | 10 | 278 | 130 | 408 | 4.43e-54 | 192 |
MS.gene004844.t1 | AT5G18190 | 37.234 | 282 | 161 | 5 | 10 | 278 | 130 | 408 | 4.43e-54 | 192 |
MS.gene004844.t1 | AT3G03940 | 37.234 | 282 | 161 | 5 | 10 | 278 | 140 | 418 | 4.67e-54 | 192 |
MS.gene004844.t1 | AT3G06030 | 25.926 | 216 | 141 | 5 | 9 | 214 | 67 | 273 | 1.19e-12 | 70.5 |
MS.gene004844.t1 | AT2G38910 | 26.667 | 285 | 156 | 10 | 2 | 246 | 119 | 390 | 3.83e-12 | 68.9 |
MS.gene004844.t1 | AT3G50530 | 26.872 | 227 | 143 | 7 | 6 | 220 | 144 | 359 | 4.03e-12 | 68.9 |
MS.gene004844.t1 | AT1G09000 | 25.581 | 215 | 141 | 4 | 10 | 214 | 69 | 274 | 3.67e-11 | 65.9 |
MS.gene004844.t1 | AT5G39440 | 27.354 | 223 | 147 | 6 | 10 | 228 | 19 | 230 | 3.75e-11 | 65.5 |
MS.gene004844.t1 | AT2G17890 | 23.423 | 222 | 149 | 7 | 9 | 220 | 107 | 317 | 4.24e-11 | 65.5 |
MS.gene004844.t1 | AT1G09000 | 25.581 | 215 | 141 | 4 | 10 | 214 | 69 | 274 | 8.36e-11 | 64.7 |
MS.gene004844.t1 | AT1G30270 | 28.049 | 246 | 139 | 12 | 8 | 237 | 29 | 252 | 8.69e-11 | 64.3 |
Find 122 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATTTAATAATCGTGCTTC+TGG | 0.214021 | 1.4:-62064408 | MS.gene004844:CDS |
TGTCACTTGGCACTGGAAAA+AGG | 0.247125 | 1.4:-62064341 | MS.gene004844:CDS |
GCTAGATAAGACAGGTCTTT+TGG | 0.256276 | 1.4:+62064548 | None:intergenic |
CGGGTATTCCCCATTTAAAA+TGG | 0.292102 | 1.4:-62068665 | MS.gene004844:CDS |
ATTATTAAATGATGATGATT+TGG | 0.313853 | 1.4:+62064419 | None:intergenic |
TTCAAGCTCGGAAGGAAAAT+TGG | 0.317743 | 1.4:-62070254 | MS.gene004844:CDS |
GTGATGATGGATCATGTAAT+TGG | 0.322381 | 1.4:-62070284 | MS.gene004844:CDS |
CTTGGTTCACCAGAAGAGTT+TGG | 0.328063 | 1.4:+62064519 | None:intergenic |
CACAAATTGGATCTAGTTCC+AGG | 0.331261 | 1.4:-62065298 | MS.gene004844:CDS |
AAAATTGGTGGTGGGTCATT+TGG | 0.338722 | 1.4:-62070239 | MS.gene004844:CDS |
AGAGGAAGTTGCTCTTAAAT+TGG | 0.345528 | 1.4:-62070079 | MS.gene004844:intron |
TTTAACCTTCTCGGATGAAT+AGG | 0.346286 | 1.4:+62065434 | None:intergenic |
AGCAGCCGTCCAAACTCTTC+TGG | 0.358357 | 1.4:-62064528 | MS.gene004844:CDS |
TAGATTCTCGGGTGCAGTTC+AGG | 0.359219 | 1.4:-62064811 | MS.gene004844:CDS |
ATTCCCCATTTAAAATGGTT+TGG | 0.360672 | 1.4:-62068660 | MS.gene004844:CDS |
GAATTCAAATTTAACCTTCT+CGG | 0.361148 | 1.4:+62065425 | None:intergenic |
ATATTGAAGTATCCACAAAT+TGG | 0.362130 | 1.4:-62065311 | MS.gene004844:CDS |
CATTTAATAATCGTGCTTCT+GGG | 0.365719 | 1.4:-62064407 | MS.gene004844:CDS |
GAGAGAGTAGAACGGCCTTC+AGG | 0.366937 | 1.4:-62065116 | MS.gene004844:intron |
ACTTGTTTAACTATTGCAAT+AGG | 0.374193 | 1.4:-62068581 | MS.gene004844:CDS |
TTCAGGTGGACCAGAGATTC+GGG | 0.376581 | 1.4:-62064835 | MS.gene004844:intron |
TGACCTCCTTGGACCAAGTC+TGG | 0.378575 | 1.4:-62068607 | MS.gene004844:CDS |
TTTCAGGTGGACCAGAGATT+CGG | 0.384714 | 1.4:-62064836 | MS.gene004844:intron |
GCGGGTTATAATACCTCTAT+AGG | 0.393119 | 1.4:+62065691 | None:intergenic |
GTCATAAATCCAGGACAATC+AGG | 0.401717 | 1.4:-62065140 | MS.gene004844:CDS |
ACTCTCTCTCCTGATTGTCC+TGG | 0.401749 | 1.4:+62065131 | None:intergenic |
AGTTTGATTATGTGTTTGAT+TGG | 0.406009 | 1.4:-62065337 | MS.gene004844:CDS |
ACAAAGCAGAAGAGATGATC+TGG | 0.417037 | 1.4:-62065908 | MS.gene004844:CDS |
AAATTGTACATGCTTCTTCA+AGG | 0.419496 | 1.4:-62069044 | MS.gene004844:CDS |
TTTAGGACGCAAAGCAAATC+AGG | 0.425650 | 1.4:-62068357 | MS.gene004844:intron |
TTTATGACTGGTTTCCCACT+TGG | 0.426175 | 1.4:+62065155 | None:intergenic |
TTTAAAATGGTTTGGAGTTG+AGG | 0.433665 | 1.4:-62068652 | MS.gene004844:CDS |
GTCATTTGGAGAGCTCTACT+TGG | 0.434739 | 1.4:-62070225 | MS.gene004844:CDS |
GATTGTCCTGGATTTATGAC+TGG | 0.439156 | 1.4:+62065143 | None:intergenic |
TTAAAATGGTTTGGAGTTGA+GGG | 0.440355 | 1.4:-62068651 | MS.gene004844:CDS |
GTAGTGAAGTTGAGGATGTT+TGG | 0.441312 | 1.4:+62069073 | None:intergenic |
CGGCTAGAGCGGCTTTCACT+TGG | 0.441375 | 1.4:+62064501 | None:intergenic |
GTGTGCATGGTGATCATTCC+AGG | 0.443890 | 1.4:-62064758 | MS.gene004844:CDS |
AACTGTTTCCCAGTCTCCCT+TGG | 0.448040 | 1.4:-62065780 | MS.gene004844:intron |
CTCTTGAGATACGAATAATC+AGG | 0.448532 | 1.4:+62065469 | None:intergenic |
GCAAGTGTTAATACTCATCT+AGG | 0.449215 | 1.4:-62066043 | MS.gene004844:CDS |
CAGGTATACATAATTGATTA+CGG | 0.449576 | 1.4:-62066709 | MS.gene004844:CDS |
ACCGCAACGATCGGCAGTAA+TGG | 0.450799 | 1.4:+62065503 | None:intergenic |
TCAGGTGTTAATGTACAAAC+TGG | 0.455615 | 1.4:-62070102 | MS.gene004844:intron |
TAAAGTACTCACCCGGGCCC+TGG | 0.463637 | 1.4:+62065280 | None:intergenic |
TGCTACTGCTCAAGAGCAAT+CGG | 0.463680 | 1.4:+62064481 | None:intergenic |
TGAGGATGTTTGGTCTTCAC+AGG | 0.466320 | 1.4:+62069083 | None:intergenic |
AGAGATTCGGGATAGATTCT+CGG | 0.471393 | 1.4:-62064823 | MS.gene004844:CDS |
GAGAATCTATCCCGAATCTC+TGG | 0.479581 | 1.4:+62064825 | None:intergenic |
TTAAACAAGTCTTCCAGACT+TGG | 0.485095 | 1.4:+62068594 | None:intergenic |
GAACTCCTGTCACTTGGCAC+TGG | 0.485260 | 1.4:-62064348 | MS.gene004844:CDS |
TTGGATCTAGTTCCAGGGCC+CGG | 0.486826 | 1.4:-62065292 | MS.gene004844:CDS |
CCTTGGCAAGGTTTGAAAGC+TGG | 0.488040 | 1.4:-62065763 | MS.gene004844:CDS |
CAGGCATTTGCAAGAAGGAA+TGG | 0.490425 | 1.4:-62064792 | MS.gene004844:CDS |
TGGATCTAGTTCCAGGGCCC+GGG | 0.493698 | 1.4:-62065291 | MS.gene004844:intron |
AGCTTTGAACTCCTGTCACT+TGG | 0.494711 | 1.4:-62064354 | MS.gene004844:CDS |
CAGTTCAGGCATTTGCAAGA+AGG | 0.496735 | 1.4:-62064797 | MS.gene004844:CDS |
TTTCCCAGTCTCCCTTGGCA+AGG | 0.501011 | 1.4:-62065775 | MS.gene004844:intron |
GAAGATGCTTACTCCTATAG+AGG | 0.503426 | 1.4:-62065704 | MS.gene004844:intron |
GAGTATTAACACTTGCATAC+CGG | 0.504831 | 1.4:+62066050 | None:intergenic |
GAGATTCGGGATAGATTCTC+GGG | 0.507677 | 1.4:-62064822 | MS.gene004844:CDS |
CTGGAACTAGATCCAATTTG+TGG | 0.509685 | 1.4:+62065299 | None:intergenic |
CTCATCTGAAGATCTATGCC+TGG | 0.513835 | 1.4:+62064740 | None:intergenic |
AATTGTACATGCTTCTTCAA+GGG | 0.515160 | 1.4:-62069043 | MS.gene004844:CDS |
TTTGCAAGAAGGAATGGATC+TGG | 0.516230 | 1.4:-62064786 | MS.gene004844:CDS |
AAACAAACATGGTACCTGTA+TGG | 0.519200 | 1.4:+62066643 | None:intergenic |
TATCTTCAAACCGCAACGAT+CGG | 0.520589 | 1.4:+62065494 | None:intergenic |
CTAACCACGTCTTTAGAAGA+TGG | 0.525542 | 1.4:+62064717 | None:intergenic |
TTTGACTCGTAGTGAAGTTG+AGG | 0.532224 | 1.4:+62069065 | None:intergenic |
CCAGCTTTCAAACCTTGCCA+AGG | 0.533106 | 1.4:+62065763 | None:intergenic |
GTTAATACTCATCTAGGAGT+TGG | 0.534550 | 1.4:-62066037 | MS.gene004844:intron |
AGTATTAACACTTGCATACC+GGG | 0.534714 | 1.4:+62066051 | None:intergenic |
GGGAAACCAGTCATAAATCC+AGG | 0.534889 | 1.4:-62065149 | MS.gene004844:CDS |
TCCATTACTGCCGATCGTTG+CGG | 0.536213 | 1.4:-62065504 | MS.gene004844:CDS |
TCATTTGGAGAGCTCTACTT+GGG | 0.539914 | 1.4:-62070224 | MS.gene004844:intron |
CACACAAGCATATACCATAC+AGG | 0.541677 | 1.4:-62066657 | MS.gene004844:intron |
CTCGGAAGGAAAATTGGTGG+TGG | 0.543152 | 1.4:-62070248 | MS.gene004844:CDS |
CAGCTTTCAAACCTTGCCAA+GGG | 0.543251 | 1.4:+62065764 | None:intergenic |
CGTGACCTATTCATCCGAGA+AGG | 0.545158 | 1.4:-62065439 | MS.gene004844:intron |
TTTGTGCAAGGCACATCCGT+TGG | 0.545816 | 1.4:-62065542 | MS.gene004844:CDS |
GCCATGGCAATTGACCTCCT+TGG | 0.551055 | 1.4:-62068618 | MS.gene004844:CDS |
AGTTGTCAGGCTTTATATCA+CGG | 0.558010 | 1.4:+62068390 | None:intergenic |
ATTGTACATGCTTCTTCAAG+GGG | 0.562314 | 1.4:-62069042 | MS.gene004844:CDS |
AAAACCTCACTGGAACTGCC+CGG | 0.564841 | 1.4:-62066069 | MS.gene004844:CDS |
GGATCTGGCCATGGTGTGCA+TGG | 0.573110 | 1.4:-62064771 | MS.gene004844:CDS |
CGTGCTTCTGGGGCAAGAGG+TGG | 0.573464 | 1.4:-62064396 | MS.gene004844:CDS |
GTGGAAAATTCAAGCTCGGA+AGG | 0.575556 | 1.4:-62070262 | MS.gene004844:CDS |
GGACGGCTGCTAGATAAGAC+AGG | 0.584588 | 1.4:+62064540 | None:intergenic |
ATTGGTGGAAAATTCAAGCT+CGG | 0.586349 | 1.4:-62070266 | MS.gene004844:CDS |
AGAGATGATCTGGAATCACT+TGG | 0.587254 | 1.4:-62065898 | MS.gene004844:CDS |
AATCGTGCTTCTGGGGCAAG+AGG | 0.593465 | 1.4:-62064399 | MS.gene004844:CDS |
GTTCACCAGAAGAGTTTGGA+CGG | 0.595743 | 1.4:+62064523 | None:intergenic |
ATTTAATAATCGTGCTTCTG+GGG | 0.598016 | 1.4:-62064406 | MS.gene004844:CDS |
TCCAAGGAGGTCAATTGCCA+TGG | 0.600545 | 1.4:+62068617 | None:intergenic |
CAGGCTTTATATCACGGTGA+AGG | 0.608260 | 1.4:+62068396 | None:intergenic |
GCTTGTGTGTGTGAAGATCT+CGG | 0.612004 | 1.4:+62066671 | None:intergenic |
AAGTATGATGTAAATTCCAA+CGG | 0.613345 | 1.4:+62065526 | None:intergenic |
AGTCTTCCAGACTTGGTCCA+AGG | 0.617923 | 1.4:+62068601 | None:intergenic |
ACAAATTGGATCTAGTTCCA+GGG | 0.625877 | 1.4:-62065297 | MS.gene004844:CDS |
GTTGAGTACATGCACTCCCG+TGG | 0.629864 | 1.4:-62068422 | MS.gene004844:CDS |
ATGATGGATCATGTAATTGG+TGG | 0.630712 | 1.4:-62070281 | MS.gene004844:CDS |
AAGCTCGGAAGGAAAATTGG+TGG | 0.634557 | 1.4:-62070251 | MS.gene004844:CDS |
TCGGAAGGAAAATTGGTGGT+GGG | 0.637716 | 1.4:-62070247 | MS.gene004844:CDS |
AGAAGGAATGGATCTGGCCA+TGG | 0.643782 | 1.4:-62064780 | MS.gene004844:CDS |
TGAGGGTGACTACAATGCCA+TGG | 0.644969 | 1.4:-62068634 | MS.gene004844:CDS |
TGTTAATGTACAAACTGGAG+AGG | 0.648733 | 1.4:-62070097 | MS.gene004844:CDS |
ACTACTCAGAGGACTCAACC+AGG | 0.650293 | 1.4:-62064450 | MS.gene004844:CDS |
CCGCGTAGCTCTTCTCGTCA+CGG | 0.653072 | 1.4:-62064579 | MS.gene004844:CDS |
TGTAGCAAGCTGATTCTGAG+AGG | 0.654308 | 1.4:-62064602 | MS.gene004844:intron |
AATGATCACCATGCACACCA+TGG | 0.661002 | 1.4:+62064763 | None:intergenic |
GATGATTTGGACTCAAGACC+TGG | 0.661178 | 1.4:+62064432 | None:intergenic |
ATCACGGTGAAGGAAACCAC+GGG | 0.662401 | 1.4:+62068406 | None:intergenic |
TCAAGAGCAATCGGCTAGAG+CGG | 0.663121 | 1.4:+62064490 | None:intergenic |
AATCAGGAGAGAGAGTAGAA+CGG | 0.663172 | 1.4:-62065124 | MS.gene004844:CDS |
CATACCGGGCAGTTCCAGTG+AGG | 0.669824 | 1.4:+62066065 | None:intergenic |
TATCACGGTGAAGGAAACCA+CGG | 0.680680 | 1.4:+62068405 | None:intergenic |
CTTCCAGACTTGGTCCAAGG+AGG | 0.681469 | 1.4:+62068604 | None:intergenic |
TTGTACATGCTTCTTCAAGG+GGG | 0.696070 | 1.4:-62069041 | MS.gene004844:CDS |
GTGGTCGTGATGATACACTC+AGG | 0.697269 | 1.4:-62064377 | MS.gene004844:CDS |
TGAGCCATCTTCTAAAGACG+TGG | 0.710607 | 1.4:-62064721 | MS.gene004844:intron |
GCAGACTATCTACTACTCAG+AGG | 0.717657 | 1.4:-62064461 | MS.gene004844:CDS |
CCGTGACGAGAAGAGCTACG+CGG | 0.803013 | 1.4:+62064579 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACTAAATAAACATTAATT+TGG | + | chr1.4:62067087-62067106 | None:intergenic | 10.0% |
!! | AACTAAATAAACATTAATTT+GGG | + | chr1.4:62067086-62067105 | None:intergenic | 10.0% |
!! | TTAAATATTTAAGAAAATAC+AGG | + | chr1.4:62067582-62067601 | None:intergenic | 10.0% |
!!! | CTTTTTTTATTTTAATAACT+CGG | - | chr1.4:62068811-62068830 | MS.gene004844:intron | 10.0% |
!!! | TTTTTTTATTTTAATAACTC+GGG | - | chr1.4:62068812-62068831 | MS.gene004844:intron | 10.0% |
!!! | AAATTTTATAAGGATGTAAA+TGG | - | chr1.4:62068288-62068307 | MS.gene004844:intron | 15.0% |
!!! | AATTTTATAAGGATGTAAAT+GGG | - | chr1.4:62068289-62068308 | MS.gene004844:intron | 15.0% |
!!! | ATTATTAAATGATGATGATT+TGG | + | chr1.4:62070200-62070219 | None:intergenic | 15.0% |
!!! | TAAAAATTCCTTTCTTTTAA+AGG | + | chr1.4:62064928-62064947 | None:intergenic | 15.0% |
!!! | TAAATTTCATTCTTTAGTTT+AGG | + | chr1.4:62066682-62066701 | None:intergenic | 15.0% |
!!! | TATTATTTAGTTTTGATAGT+TGG | - | chr1.4:62067330-62067349 | MS.gene004844:intron | 15.0% |
!!! | TTAAAAGAAAGGAATTTTTA+AGG | - | chr1.4:62064928-62064947 | MS.gene004844:intron | 15.0% |
!! | AAAGATCAAGCTAATTAAAA+AGG | + | chr1.4:62065333-62065352 | None:intergenic | 20.0% |
!! | AAAGTAAATAATCTATCCTA+TGG | + | chr1.4:62066504-62066523 | None:intergenic | 20.0% |
!! | AATATGCCATTATTATTAGA+GGG | + | chr1.4:62069565-62069584 | None:intergenic | 20.0% |
!! | AGAATACCTAAAAATCAAAA+TGG | + | chr1.4:62067494-62067513 | None:intergenic | 20.0% |
!! | CAAAAGTAATCATAATATCA+AGG | + | chr1.4:62067267-62067286 | None:intergenic | 20.0% |
!! | GTATTAAAAAAACACTAAGT+TGG | - | chr1.4:62067778-62067797 | MS.gene004844:intron | 20.0% |
!! | GTGAAAAATATGAAAAGTAA+AGG | - | chr1.4:62066650-62066669 | MS.gene004844:intron | 20.0% |
!! | TAAAGTTCTATTGTTCTTTA+TGG | - | chr1.4:62069594-62069613 | MS.gene004844:intron | 20.0% |
!! | TAAATAATCCCAATAAATAG+AGG | + | chr1.4:62066605-62066624 | None:intergenic | 20.0% |
!! | TAATAAATGGAAAGATCATA+TGG | - | chr1.4:62065071-62065090 | MS.gene004844:intron | 20.0% |
!! | TAATCAAAACAATCACATAA+AGG | + | chr1.4:62068961-62068980 | None:intergenic | 20.0% |
!! | TAATTTGGGTATATCAATAT+TGG | + | chr1.4:62067072-62067091 | None:intergenic | 20.0% |
!! | TGATTCCTTAAATCTATAAA+AGG | + | chr1.4:62066973-62066992 | None:intergenic | 20.0% |
!! | TGCTACAAAAATTAAGAATT+AGG | + | chr1.4:62070001-62070020 | None:intergenic | 20.0% |
!! | TTAGAGACATAACTAATAAA+TGG | - | chr1.4:62065058-62065077 | MS.gene004844:intron | 20.0% |
!! | TTCTTTGCAACATATATAAT+TGG | + | chr1.4:62069027-62069046 | None:intergenic | 20.0% |
!!! | AATTGTTTTTAATACATTGC+AGG | - | chr1.4:62067888-62067907 | MS.gene004844:intron | 20.0% |
!!! | AGCTTTCTTTTAAAAGTATA+GGG | + | chr1.4:62066128-62066147 | None:intergenic | 20.0% |
!!! | AGTTTAAAAACATTGTTTTG+TGG | - | chr1.4:62068065-62068084 | MS.gene004844:intron | 20.0% |
!!! | ATTTTACTACTTTTTCTACT+TGG | - | chr1.4:62067441-62067460 | MS.gene004844:intron | 20.0% |
!!! | ATTTTTACTTATAAGCAACT+CGG | - | chr1.4:62066153-62066172 | MS.gene004844:intron | 20.0% |
!!! | ATTTTTCCCTCTAATAATAA+TGG | - | chr1.4:62069556-62069575 | MS.gene004844:intron | 20.0% |
!!! | CAATGTTTTTAAACTTCAAA+AGG | + | chr1.4:62068060-62068079 | None:intergenic | 20.0% |
!!! | CTTGATATTATGATTACTTT+TGG | - | chr1.4:62067265-62067284 | MS.gene004844:intron | 20.0% |
!!! | GTTGCTATATTTTTGTTTAT+TGG | - | chr1.4:62064826-62064845 | MS.gene004844:CDS | 20.0% |
!!! | TAGGATTTTTATGAACTAAT+TGG | - | chr1.4:62067384-62067403 | MS.gene004844:intron | 20.0% |
!!! | TTACTTCCATTTTGATTTTT+AGG | - | chr1.4:62067485-62067504 | MS.gene004844:intron | 20.0% |
!!! | TTATTTTAACATAAATGAGC+TGG | + | chr1.4:62068162-62068181 | None:intergenic | 20.0% |
!!! | TTTTATAGATTTAAGGAATC+AGG | - | chr1.4:62066972-62066991 | MS.gene004844:intron | 20.0% |
!!! | TTTTGATTACTAGAATACTT+GGG | - | chr1.4:62068972-62068991 | MS.gene004844:intron | 20.0% |
! | AAACAATATGCATGTCAATA+AGG | - | chr1.4:62064676-62064695 | MS.gene004844:intron | 25.0% |
! | AACGATAAATAAACAAGTGA+TGG | + | chr1.4:62068442-62068461 | None:intergenic | 25.0% |
! | AAGTATGATGTAAATTCCAA+CGG | + | chr1.4:62069093-62069112 | None:intergenic | 25.0% |
! | AATCACAACTGAAACTAATT+CGG | + | chr1.4:62066362-62066381 | None:intergenic | 25.0% |
! | ACTTGTTTAACTATTGCAAT+AGG | - | chr1.4:62066035-62066054 | MS.gene004844:intron | 25.0% |
! | AGAAAAACAGAGAAAACAAA+TGG | - | chr1.4:62065229-62065248 | MS.gene004844:intron | 25.0% |
! | AGTTTGATTATGTGTTTGAT+TGG | - | chr1.4:62069279-62069298 | MS.gene004844:intron | 25.0% |
! | ATATTCTTCCATATATATCG+AGG | + | chr1.4:62066753-62066772 | None:intergenic | 25.0% |
! | ATCATTATGTATTCAAGACA+AGG | + | chr1.4:62068229-62068248 | None:intergenic | 25.0% |
! | ATTTAGTAATGTTTCTTCAC+AGG | - | chr1.4:62069251-62069270 | MS.gene004844:intron | 25.0% |
! | ATTTGACAATGAAAAACCTA+AGG | - | chr1.4:62064969-62064988 | MS.gene004844:intron | 25.0% |
! | CAGGTATACATAATTGATTA+CGG | - | chr1.4:62067907-62067926 | MS.gene004844:intron | 25.0% |
! | GAATATGCCATTATTATTAG+AGG | + | chr1.4:62069566-62069585 | None:intergenic | 25.0% |
! | GAATTCAAATTTAACCTTCT+CGG | + | chr1.4:62069194-62069213 | None:intergenic | 25.0% |
! | GAGATCATTAGGAAATTATT+AGG | + | chr1.4:62066461-62066480 | None:intergenic | 25.0% |
! | GATTGTTATGCTTATATTTC+AGG | - | chr1.4:62069764-62069783 | MS.gene004844:intron | 25.0% |
! | TATACACAATTCAACTATGT+AGG | - | chr1.4:62067365-62067384 | MS.gene004844:intron | 25.0% |
! | TATTCTTCCATATATATCGA+GGG | + | chr1.4:62066752-62066771 | None:intergenic | 25.0% |
! | TCCTAGCAAAACAATATATA+AGG | + | chr1.4:62064435-62064454 | None:intergenic | 25.0% |
! | TTAAACTTCAAAAGGTGAAA+AGG | + | chr1.4:62068052-62068071 | None:intergenic | 25.0% |
! | TTCCTTAAATCTATAAAAGG+AGG | + | chr1.4:62066970-62066989 | None:intergenic | 25.0% |
! | TTGAGGGGAAAAATAATAAA+AGG | + | chr1.4:62065614-62065633 | None:intergenic | 25.0% |
! | TTTGACAATGAAAAACCTAA+GGG | - | chr1.4:62064970-62064989 | MS.gene004844:intron | 25.0% |
!! | AAAGTATTAAAGGAAAAGCA+AGG | + | chr1.4:62066556-62066575 | None:intergenic | 25.0% |
!! | AACTCCAAACCATTTTAAAT+GGG | + | chr1.4:62065963-62065982 | None:intergenic | 25.0% |
!! | ATATTGAAGTATCCACAAAT+TGG | - | chr1.4:62069305-62069324 | MS.gene004844:intron | 25.0% |
!! | ATCCTCCTTTTATAGATTTA+AGG | - | chr1.4:62066965-62066984 | MS.gene004844:intron | 25.0% |
!! | ATTTCATTCTTTAGTTTAGG+AGG | + | chr1.4:62066679-62066698 | None:intergenic | 25.0% |
!! | CAAGTTTGGGAATATTATTT+TGG | + | chr1.4:62068359-62068378 | None:intergenic | 25.0% |
!! | CAGACAGGTTAAATTTTATA+AGG | - | chr1.4:62068278-62068297 | MS.gene004844:intron | 25.0% |
!!! | ACCTTATATATTGTTTTGCT+AGG | - | chr1.4:62064431-62064450 | MS.gene004844:CDS | 25.0% |
!!! | ATGTTATGTTTTGAATGGAA+GGG | - | chr1.4:62066928-62066947 | MS.gene004844:intron | 25.0% |
!!! | CTAAGATGTTATGTTTTGAA+TGG | - | chr1.4:62066923-62066942 | MS.gene004844:intron | 25.0% |
!!! | CTGTTTTTCTATTTTTCCAA+TGG | + | chr1.4:62065219-62065238 | None:intergenic | 25.0% |
!!! | GAGCTTTCTTTTAAAAGTAT+AGG | + | chr1.4:62066129-62066148 | None:intergenic | 25.0% |
!!! | GATTTTTAGGTATTCTTTTC+AGG | - | chr1.4:62067498-62067517 | MS.gene004844:intron | 25.0% |
!!! | GCATAGATGGTTTTTTTTTT+TGG | - | chr1.4:62064616-62064635 | MS.gene004844:intron | 25.0% |
!!! | GTTTTGATTACTAGAATACT+TGG | - | chr1.4:62068971-62068990 | MS.gene004844:intron | 25.0% |
!!! | TAGACTTCATATTCCTTTTT+TGG | - | chr1.4:62068184-62068203 | MS.gene004844:intron | 25.0% |
!!! | TATGTGTTTCTGGAAATAAA+AGG | + | chr1.4:62067014-62067033 | None:intergenic | 25.0% |
!!! | TCAACTTAATTGATTTGATG+AGG | - | chr1.4:62066414-62066433 | MS.gene004844:intron | 25.0% |
!!! | TCTTGCTTTAAGATAGAAAA+TGG | + | chr1.4:62067219-62067238 | None:intergenic | 25.0% |
!!! | TGAAGTTATTGACTTCTATT+GGG | - | chr1.4:62064564-62064583 | MS.gene004844:CDS | 25.0% |
!!! | TGTATTTCTAGCAAAACTAA+AGG | - | chr1.4:62069400-62069419 | MS.gene004844:intron | 25.0% |
!!! | TTCTGTGCTGATTTTTTTTT+TGG | - | chr1.4:62067850-62067869 | MS.gene004844:intron | 25.0% |
!!! | TTTAACTTGATTTCCAAGAA+TGG | + | chr1.4:62067697-62067716 | None:intergenic | 25.0% |
AAACCCATTAAAAAGTTGTC+AGG | + | chr1.4:62066242-62066261 | None:intergenic | 30.0% | |
AAATTGTACATGCTTCTTCA+AGG | - | chr1.4:62065572-62065591 | MS.gene004844:intron | 30.0% | |
AACAGAACTCAATGAATCAA+AGG | + | chr1.4:62067467-62067486 | None:intergenic | 30.0% | |
AAGCTAATTAAAAAGGATGC+TGG | + | chr1.4:62065326-62065345 | None:intergenic | 30.0% | |
AATCGTACTCGTATTTATTG+AGG | - | chr1.4:62066628-62066647 | MS.gene004844:intron | 30.0% | |
AATTGTACATGCTTCTTCAA+GGG | - | chr1.4:62065573-62065592 | MS.gene004844:intron | 30.0% | |
ATAATATCAAGGCTGACAAA+TGG | + | chr1.4:62067256-62067275 | None:intergenic | 30.0% | |
ATAATCTATCCTATGGATAG+TGG | + | chr1.4:62066497-62066516 | None:intergenic | 30.0% | |
ATGGCTATAGTATGATCAAA+TGG | - | chr1.4:62065090-62065109 | MS.gene004844:intron | 30.0% | |
ATTTAATAATCGTGCTTCTG+GGG | - | chr1.4:62070210-62070229 | MS.gene004844:intron | 30.0% | |
CAGACTATATTTGTAACCAT+TGG | - | chr1.4:62065200-62065219 | MS.gene004844:intron | 30.0% | |
CATTTAATAATCGTGCTTCT+GGG | - | chr1.4:62070209-62070228 | MS.gene004844:intron | 30.0% | |
GAATTAGATGTAACTACAGA+AGG | + | chr1.4:62067558-62067577 | None:intergenic | 30.0% | |
GAATTGAAAAATTGTACTCC+TGG | - | chr1.4:62067612-62067631 | MS.gene004844:intron | 30.0% | |
GGAAATCAAGTTAAACATGA+AGG | - | chr1.4:62067702-62067721 | MS.gene004844:intron | 30.0% | |
TAATATCAAGGCTGACAAAT+GGG | + | chr1.4:62067255-62067274 | None:intergenic | 30.0% | |
TATTAAAGGAAAAGCAAGGT+CGG | + | chr1.4:62066552-62066571 | None:intergenic | 30.0% | |
TCATTTAATAATCGTGCTTC+TGG | - | chr1.4:62070208-62070227 | MS.gene004844:intron | 30.0% | |
TGAATGCAGAAATGAAAATC+TGG | + | chr1.4:62065419-62065438 | None:intergenic | 30.0% | |
TGACAAACAAAGGAAGAAAA+AGG | + | chr1.4:62065509-62065528 | None:intergenic | 30.0% | |
TGGTTACTTGAATTTCAGTT+AGG | - | chr1.4:62064846-62064865 | MS.gene004844:intron | 30.0% | |
TGTTATGCTTATATTTCAGG+TGG | - | chr1.4:62069767-62069786 | MS.gene004844:intron | 30.0% | |
TTCAGTGTAATTACAAGTGT+CGG | + | chr1.4:62065746-62065765 | None:intergenic | 30.0% | |
TTTAAGGATAACGATTGAGT+TGG | - | chr1.4:62064944-62064963 | MS.gene004844:intron | 30.0% | |
TTTCCAAGAATGGCTTATTA+TGG | + | chr1.4:62067687-62067706 | None:intergenic | 30.0% | |
TTTCCAATTATTAGCTGTGT+CGG | - | chr1.4:62065777-62065796 | MS.gene004844:intron | 30.0% | |
! | AAAGCCTGACAACTTTTTAA+TGG | - | chr1.4:62066235-62066254 | MS.gene004844:intron | 30.0% |
! | AACTGCAATGAAGTTTTACA+TGG | + | chr1.4:62067120-62067139 | None:intergenic | 30.0% |
! | AAGCCTGACAACTTTTTAAT+GGG | - | chr1.4:62066236-62066255 | MS.gene004844:intron | 30.0% |
! | AATTGGACAGTATTTCTACT+AGG | - | chr1.4:62067401-62067420 | MS.gene004844:intron | 30.0% |
! | ACATGTTGCCTTTAAAAGAA+AGG | - | chr1.4:62064917-62064936 | MS.gene004844:intron | 30.0% |
! | ACTCCAAACCATTTTAAATG+GGG | + | chr1.4:62065962-62065981 | None:intergenic | 30.0% |
! | AGATGAAGAAGCATAATTTG+AGG | + | chr1.4:62065631-62065650 | None:intergenic | 30.0% |
! | AGCTTGATCTTTTAAACAAC+TGG | - | chr1.4:62065341-62065360 | MS.gene004844:CDS | 30.0% |
! | ATCTTTTTGTTAAGATGCCA+TGG | + | chr1.4:62066855-62066874 | None:intergenic | 30.0% |
! | ATGAAGAAGCATAATTTGAG+GGG | + | chr1.4:62065629-62065648 | None:intergenic | 30.0% |
! | ATTCCCCATTTAAAATGGTT+TGG | - | chr1.4:62065956-62065975 | MS.gene004844:intron | 30.0% |
! | CAACTCCAAACCATTTTAAA+TGG | + | chr1.4:62065964-62065983 | None:intergenic | 30.0% |
! | CCTTCAAAACTTTGTTATGA+AGG | - | chr1.4:62069951-62069970 | MS.gene004844:intron | 30.0% |
! | CTAAATTTGTTCCTTGAGTA+CGG | - | chr1.4:62068009-62068028 | MS.gene004844:intron | 30.0% |
! | GATGAAGAAGCATAATTTGA+GGG | + | chr1.4:62065630-62065649 | None:intergenic | 30.0% |
! | TAAATTTGTTCCTTGAGTAC+GGG | - | chr1.4:62068010-62068029 | MS.gene004844:intron | 30.0% |
! | TACTAGGAGTTTGTTTATTG+AGG | - | chr1.4:62067417-62067436 | MS.gene004844:intron | 30.0% |
! | TCGTTTTCTATGCTTTTGTT+TGG | - | chr1.4:62064490-62064509 | MS.gene004844:CDS | 30.0% |
! | TGGGTGAGATAAAGTATTAA+AGG | + | chr1.4:62066566-62066585 | None:intergenic | 30.0% |
! | TGTTTGAGTCTGAATTTGTT+TGG | + | chr1.4:62067731-62067750 | None:intergenic | 30.0% |
! | TTAAAATGGTTTGGAGTTGA+GGG | - | chr1.4:62065965-62065984 | MS.gene004844:intron | 30.0% |
! | TTCATGTCTCTAATTTTGAG+AGG | - | chr1.4:62067167-62067186 | MS.gene004844:intron | 30.0% |
! | TTGTGCTAATCAACTCTTTT+CGG | - | chr1.4:62069424-62069443 | MS.gene004844:intron | 30.0% |
! | TTTAAAATGGTTTGGAGTTG+AGG | - | chr1.4:62065964-62065983 | MS.gene004844:intron | 30.0% |
!! | CCTTCATAACAAAGTTTTGA+AGG | + | chr1.4:62069954-62069973 | None:intergenic | 30.0% |
!! | GATGTTATGTTTTGAATGGA+AGG | - | chr1.4:62066927-62066946 | MS.gene004844:intron | 30.0% |
!! | GTGAAGTTATTGACTTCTAT+TGG | - | chr1.4:62064563-62064582 | MS.gene004844:CDS | 30.0% |
!! | TGTTATGTTTTGAATGGAAG+GGG | - | chr1.4:62066929-62066948 | MS.gene004844:intron | 30.0% |
!! | TTCCTCTTTTCTTTTTGAAG+CGG | - | chr1.4:62065931-62065950 | MS.gene004844:intron | 30.0% |
!! | TTTTTCTTCCTTTGTTTGTC+AGG | - | chr1.4:62065508-62065527 | MS.gene004844:CDS | 30.0% |
!!! | AGGAATGTTGATTTTTCTAC+TGG | - | chr1.4:62064592-62064611 | MS.gene004844:CDS | 30.0% |
!!! | ATTATTTTGGATGCTGATTC+AGG | + | chr1.4:62068346-62068365 | None:intergenic | 30.0% |
!!! | ATTCCTTTTTTGGATTCCTT+GGG | - | chr1.4:62068194-62068213 | MS.gene004844:intron | 30.0% |
!!! | GACAACTTTTTAATGGGTTT+AGG | - | chr1.4:62066242-62066261 | MS.gene004844:intron | 30.0% |
!!! | TATTCCTTTTTTGGATTCCT+TGG | - | chr1.4:62068193-62068212 | MS.gene004844:intron | 30.0% |
AAACAAACATGGTACCTGTA+TGG | + | chr1.4:62067976-62067995 | None:intergenic | 35.0% | |
AATAAACAAGTGATGGCTTC+AGG | + | chr1.4:62068435-62068454 | None:intergenic | 35.0% | |
AATAAATAGAGGCTACACAC+AGG | + | chr1.4:62066594-62066613 | None:intergenic | 35.0% | |
AATATCAAGGCTGACAAATG+GGG | + | chr1.4:62067254-62067273 | None:intergenic | 35.0% | |
ACACAACACTTCACAAAATG+AGG | + | chr1.4:62069373-62069392 | None:intergenic | 35.0% | |
ACAGAAGCAAACAACATACT+GGG | + | chr1.4:62068098-62068117 | None:intergenic | 35.0% | |
ACATAATGTACCTAGAGTCT+TGG | - | chr1.4:62065139-62065158 | MS.gene004844:CDS | 35.0% | |
ACTACACACTAGAGATCATT+AGG | + | chr1.4:62066472-62066491 | None:intergenic | 35.0% | |
AGACCATAATAAGCCATTCT+TGG | - | chr1.4:62067681-62067700 | MS.gene004844:intron | 35.0% | |
AGAGGAAGTTGCTCTTAAAT+TGG | - | chr1.4:62064537-62064556 | MS.gene004844:CDS | 35.0% | |
AGTATTAACACTTGCATACC+GGG | + | chr1.4:62068568-62068587 | None:intergenic | 35.0% | |
AGTTGAAAGCTATGTGTTTC+TGG | + | chr1.4:62067024-62067043 | None:intergenic | 35.0% | |
ATGAAAAACCTAAGGGAGAT+TGG | - | chr1.4:62064977-62064996 | MS.gene004844:intron | 35.0% | |
ATGGTCATTCACAGAAGAAA+AGG | + | chr1.4:62068504-62068523 | None:intergenic | 35.0% | |
ATTGGTGGAAAATTCAAGCT+CGG | - | chr1.4:62064350-62064369 | MS.gene004844:CDS | 35.0% | |
ATTGTACATGCTTCTTCAAG+GGG | - | chr1.4:62065574-62065593 | MS.gene004844:intron | 35.0% | |
ATTTCAGTCCTACAGTTGTA+TGG | - | chr1.4:62069713-62069732 | MS.gene004844:intron | 35.0% | |
CAATATCTATCCACATCTGT+TGG | - | chr1.4:62065299-62065318 | MS.gene004844:CDS | 35.0% | |
CAATGCATTGCAATATGAAG+GGG | + | chr1.4:62064754-62064773 | None:intergenic | 35.0% | |
CATAAATGACCAACCAGATA+AGG | + | chr1.4:62066319-62066338 | None:intergenic | 35.0% | |
CATAATGATTGTTGTGTTGC+TGG | - | chr1.4:62068240-62068259 | MS.gene004844:intron | 35.0% | |
CATGCTACAGTAAACAAACA+TGG | + | chr1.4:62067987-62068006 | None:intergenic | 35.0% | |
CCAAATAACATTCTCTGTCT+TGG | - | chr1.4:62066884-62066903 | MS.gene004844:intron | 35.0% | |
CCAAGACAGAGAATGTTATT+TGG | + | chr1.4:62066887-62066906 | None:intergenic | 35.0% | |
CTCTTGAGATACGAATAATC+AGG | + | chr1.4:62069150-62069169 | None:intergenic | 35.0% | |
CTTCAGGTAATGACACATAT+GGG | + | chr1.4:62068419-62068438 | None:intergenic | 35.0% | |
GAGTATTAACACTTGCATAC+CGG | + | chr1.4:62068569-62068588 | None:intergenic | 35.0% | |
GCAAGTGTTAATACTCATCT+AGG | - | chr1.4:62068573-62068592 | MS.gene004844:CDS | 35.0% | |
GCAATGCATTGCAATATGAA+GGG | + | chr1.4:62064755-62064774 | None:intergenic | 35.0% | |
GGTGAAAAGGAAACATGATA+TGG | + | chr1.4:62068039-62068058 | None:intergenic | 35.0% | |
GTGTGTAGCCTCTATTTATT+GGG | - | chr1.4:62066594-62066613 | MS.gene004844:intron | 35.0% | |
GTTAATACTCATCTAGGAGT+TGG | - | chr1.4:62068579-62068598 | MS.gene004844:CDS | 35.0% | |
GTTTACATCATTTGACATGC+TGG | - | chr1.4:62065267-62065286 | MS.gene004844:intron | 35.0% | |
TACAGAAGCAAACAACATAC+TGG | + | chr1.4:62068099-62068118 | None:intergenic | 35.0% | |
TAGATGTAACTACAGAAGGT+GGG | + | chr1.4:62067554-62067573 | None:intergenic | 35.0% | |
TCAGACTCAAACAATGTCAT+AGG | - | chr1.4:62067738-62067757 | MS.gene004844:intron | 35.0% | |
TCAGGTGTTAATGTACAAAC+TGG | - | chr1.4:62064514-62064533 | MS.gene004844:CDS | 35.0% | |
TCCTACAGTTGTATGGTAAA+AGG | - | chr1.4:62069720-62069739 | MS.gene004844:intron | 35.0% | |
TGTGTGTAGCCTCTATTTAT+TGG | - | chr1.4:62066593-62066612 | MS.gene004844:intron | 35.0% | |
TGTTAATGTACAAACTGGAG+AGG | - | chr1.4:62064519-62064538 | MS.gene004844:CDS | 35.0% | |
TGTTTGTCAGTTTGTGTGTT+GGG | - | chr1.4:62069926-62069945 | MS.gene004844:intron | 35.0% | |
TTAAACAAGTCTTCCAGACT+TGG | + | chr1.4:62066025-62066044 | None:intergenic | 35.0% | |
TTAGATGTAACTACAGAAGG+TGG | + | chr1.4:62067555-62067574 | None:intergenic | 35.0% | |
TTCCATATATATCGAGGGAA+TGG | + | chr1.4:62066747-62066766 | None:intergenic | 35.0% | |
TTCCATTCCCTCGATATATA+TGG | - | chr1.4:62066742-62066761 | MS.gene004844:intron | 35.0% | |
TTGTTTGTCAGTTTGTGTGT+TGG | - | chr1.4:62069925-62069944 | MS.gene004844:intron | 35.0% | |
TTTAACCTTCTCGGATGAAT+AGG | + | chr1.4:62069185-62069204 | None:intergenic | 35.0% | |
! | AAATTTGTTCCTTGAGTACG+GGG | - | chr1.4:62068011-62068030 | MS.gene004844:intron | 35.0% |
! | ACAAATTGGATCTAGTTCCA+GGG | - | chr1.4:62069319-62069338 | MS.gene004844:intron | 35.0% |
! | AGTTGTCAGGCTTTATATCA+CGG | + | chr1.4:62066229-62066248 | None:intergenic | 35.0% |
! | ATAGTGTGTAGTTGGTTCTT+AGG | + | chr1.4:62067643-62067662 | None:intergenic | 35.0% |
! | ATTGTTGTGTTGCTGGATTT+GGG | - | chr1.4:62068247-62068266 | MS.gene004844:intron | 35.0% |
! | TTTTCTTCTGTGAATGACCA+TGG | - | chr1.4:62068503-62068522 | MS.gene004844:intron | 35.0% |
! | TTTTTCTACTGGTGCATAGA+TGG | - | chr1.4:62064603-62064622 | MS.gene004844:intron | 35.0% |
!! | ACAACATGGCTTTATCAGAT+CGG | + | chr1.4:62066806-62066825 | None:intergenic | 35.0% |
!! | AGCTTAACTTTGAAACAGCT+AGG | + | chr1.4:62065469-62065488 | None:intergenic | 35.0% |
!! | ATGATGGATCATGTAATTGG+TGG | - | chr1.4:62064335-62064354 | MS.gene004844:CDS | 35.0% |
!! | GTACTCATGTACTTTTTGAG+AGG | - | chr1.4:62068745-62068764 | MS.gene004844:intron | 35.0% |
!! | TCATGTACTTTTTGAGAGGA+AGG | - | chr1.4:62068749-62068768 | MS.gene004844:intron | 35.0% |
!! | TCTATGCTTTTGTTTGGTTC+AGG | - | chr1.4:62064496-62064515 | MS.gene004844:CDS | 35.0% |
!!! | TCCTCTTTTCTTTTTGAAGC+GGG | - | chr1.4:62065932-62065951 | MS.gene004844:intron | 35.0% |
!!! | TTCTTTTTCAACAGCCAAGT+GGG | - | chr1.4:62069447-62069466 | MS.gene004844:intron | 35.0% |
AATCAGGAGAGAGAGTAGAA+CGG | - | chr1.4:62069492-62069511 | MS.gene004844:intron | 40.0% | |
ACAAAGCAGAAGAGATGATC+TGG | - | chr1.4:62068708-62068727 | MS.gene004844:intron | 40.0% | |
ACCCGCTTCAAAAAGAAAAG+AGG | + | chr1.4:62065936-62065955 | None:intergenic | 40.0% | |
AGAAAAGGAGACGAATGTGT+AGG | + | chr1.4:62068489-62068508 | None:intergenic | 40.0% | |
AGAGATTCGGGATAGATTCT+CGG | - | chr1.4:62069793-62069812 | MS.gene004844:intron | 40.0% | |
AGGCTACACACAGGTTTATT+GGG | + | chr1.4:62066585-62066604 | None:intergenic | 40.0% | |
AGGGAAAACAAAAACCTCAC+TGG | - | chr1.4:62068537-62068556 | MS.gene004844:intron | 40.0% | |
AGTCAATGCTGGATATGTAG+TGG | + | chr1.4:62066287-62066306 | None:intergenic | 40.0% | |
CAACCCAAGGAATCCAAAAA+AGG | + | chr1.4:62068200-62068219 | None:intergenic | 40.0% | |
CAATGTCATAGGAACTTGAC+AGG | - | chr1.4:62067749-62067768 | MS.gene004844:intron | 40.0% | |
CACACAAGCATATACCATAC+AGG | - | chr1.4:62067959-62067978 | MS.gene004844:intron | 40.0% | |
CAGCACAGAATTTCAGCTAT+TGG | + | chr1.4:62067840-62067859 | None:intergenic | 40.0% | |
CGGGTATTCCCCATTTAAAA+TGG | - | chr1.4:62065951-62065970 | MS.gene004844:intron | 40.0% | |
CTGGAACTAGATCCAATTTG+TGG | + | chr1.4:62069320-62069339 | None:intergenic | 40.0% | |
GAAAAGGAGACGAATGTGTA+GGG | + | chr1.4:62068488-62068507 | None:intergenic | 40.0% | |
GAAGATGCTTACTCCTATAG+AGG | - | chr1.4:62068912-62068931 | MS.gene004844:intron | 40.0% | |
GATTGTCCTGGATTTATGAC+TGG | + | chr1.4:62069476-62069495 | None:intergenic | 40.0% | |
GCATTCAGTCAGTCTTAGTT+TGG | - | chr1.4:62065432-62065451 | MS.gene004844:intron | 40.0% | |
GCTTCAGGTAATGACACATA+TGG | + | chr1.4:62068420-62068439 | None:intergenic | 40.0% | |
GGCAATGCATTGCAATATGA+AGG | + | chr1.4:62064756-62064775 | None:intergenic | 40.0% | |
GGTCTCAGCTTAAATTGACT+AGG | + | chr1.4:62067666-62067685 | None:intergenic | 40.0% | |
GTACAATATGCCAAGACTCT+AGG | + | chr1.4:62065152-62065171 | None:intergenic | 40.0% | |
GTAGTGAAGTTGAGGATGTT+TGG | + | chr1.4:62065546-62065565 | None:intergenic | 40.0% | |
GTCATAAATCCAGGACAATC+AGG | - | chr1.4:62069476-62069495 | MS.gene004844:intron | 40.0% | |
GTGTAGTATCCACTATCCAT+AGG | - | chr1.4:62066485-62066504 | MS.gene004844:intron | 40.0% | |
TACCAACTTAGCTATGCTCA+CGG | - | chr1.4:62064781-62064800 | MS.gene004844:CDS | 40.0% | |
TATCTTCAAACCGCAACGAT+CGG | + | chr1.4:62069125-62069144 | None:intergenic | 40.0% | |
TCATTTGGAGAGCTCTACTT+GGG | - | chr1.4:62064392-62064411 | MS.gene004844:CDS | 40.0% | |
TGACTAGGATAGTGTGTAGT+TGG | + | chr1.4:62067651-62067670 | None:intergenic | 40.0% | |
TGCAGATCAGCTAGTAAGTA+TGG | - | chr1.4:62066087-62066106 | MS.gene004844:intron | 40.0% | |
TGTTGAAGGAAGAAACCTGA+AGG | + | chr1.4:62069518-62069537 | None:intergenic | 40.0% | |
TTAAGATGCCATGGCTTGAA+TGG | + | chr1.4:62066846-62066865 | None:intergenic | 40.0% | |
TTCAAGCTCGGAAGGAAAAT+TGG | - | chr1.4:62064362-62064381 | MS.gene004844:CDS | 40.0% | |
TTGACTTCTATTGGGTGCTT+AGG | - | chr1.4:62064572-62064591 | MS.gene004844:CDS | 40.0% | |
TTGTACATGCTTCTTCAAGG+GGG | - | chr1.4:62065575-62065594 | MS.gene004844:intron | 40.0% | |
TTGTCAGAACCTATGAAGCA+CGG | - | chr1.4:62065657-62065676 | MS.gene004844:intron | 40.0% | |
TTTGCAAGAAGGAATGGATC+TGG | - | chr1.4:62069830-62069849 | MS.gene004844:intron | 40.0% | |
! | AGAGATGATCTGGAATCACT+TGG | - | chr1.4:62068718-62068737 | MS.gene004844:intron | 40.0% |
! | AGTTGTATGGTAAAAGGCGT+TGG | - | chr1.4:62069726-62069745 | MS.gene004844:intron | 40.0% |
! | CACAAATTGGATCTAGTTCC+AGG | - | chr1.4:62069318-62069337 | MS.gene004844:intron | 40.0% |
! | CTAACCACGTCTTTAGAAGA+TGG | + | chr1.4:62069902-62069921 | None:intergenic | 40.0% |
! | GACCATGGTACTTTTGTTCA+GGG | - | chr1.4:62068518-62068537 | MS.gene004844:intron | 40.0% |
! | GACTTGAATTCAGCCTTATC+TGG | - | chr1.4:62066303-62066322 | MS.gene004844:intron | 40.0% |
! | GAGGATTTTCTTGCATATGC+AGG | + | chr1.4:62068397-62068416 | None:intergenic | 40.0% |
! | GATTGTTGTGTTGCTGGATT+TGG | - | chr1.4:62068246-62068265 | MS.gene004844:intron | 40.0% |
! | GCCTTTTACCATACAACTGT+AGG | + | chr1.4:62069724-62069743 | None:intergenic | 40.0% |
! | GCGGGTTATAATACCTCTAT+AGG | + | chr1.4:62068928-62068947 | None:intergenic | 40.0% |
! | GCTAGATAAGACAGGTCTTT+TGG | + | chr1.4:62070071-62070090 | None:intergenic | 40.0% |
! | GGAGAGAAGCTTTAACAACA+TGG | + | chr1.4:62066820-62066839 | None:intergenic | 40.0% |
! | GTGCTATTAAAGTACTCACC+CGG | + | chr1.4:62069346-62069365 | None:intergenic | 40.0% |
! | GTTGGTTCTTAGGAAATACC+AGG | + | chr1.4:62067633-62067652 | None:intergenic | 40.0% |
! | TGAATTCAGCCTTATCTGGT+TGG | - | chr1.4:62066307-62066326 | MS.gene004844:intron | 40.0% |
! | TGACCATGGTACTTTTGTTC+AGG | - | chr1.4:62068517-62068536 | MS.gene004844:intron | 40.0% |
! | TGCTATTAAAGTACTCACCC+GGG | + | chr1.4:62069345-62069364 | None:intergenic | 40.0% |
! | TTTAGGACGCAAAGCAAATC+AGG | - | chr1.4:62066259-62066278 | MS.gene004844:intron | 40.0% |
! | TTTGACTCGTAGTGAAGTTG+AGG | + | chr1.4:62065554-62065573 | None:intergenic | 40.0% |
!! | AAAATTGGTGGTGGGTCATT+TGG | - | chr1.4:62064377-62064396 | MS.gene004844:CDS | 40.0% |
!! | AGCATAGCTAAGTTGGTACT+AGG | + | chr1.4:62064779-62064798 | None:intergenic | 40.0% |
!! | ATTCCAGATCTTGCTGTTGA+AGG | + | chr1.4:62069532-62069551 | None:intergenic | 40.0% |
!! | CATAGCTAAGTTGGTACTAG+GGG | + | chr1.4:62064777-62064796 | None:intergenic | 40.0% |
!! | GCATAGCTAAGTTGGTACTA+GGG | + | chr1.4:62064778-62064797 | None:intergenic | 40.0% |
!! | TTCCCTGAACAAAAGTACCA+TGG | + | chr1.4:62068523-62068542 | None:intergenic | 40.0% |
!! | TTTATGACTGGTTTCCCACT+TGG | + | chr1.4:62069464-62069483 | None:intergenic | 40.0% |
!!! | GATCTCGGAACTTTTTTGCA+AGG | + | chr1.4:62067933-62067952 | None:intergenic | 40.0% |
!!! | GTTCTTTTTCAACAGCCAAG+TGG | - | chr1.4:62069446-62069465 | MS.gene004844:intron | 40.0% |
AAGCAAACAACATACTGGGC+AGG | + | chr1.4:62068094-62068113 | None:intergenic | 45.0% | |
AAGCTCGGAAGGAAAATTGG+TGG | - | chr1.4:62064365-62064384 | MS.gene004844:CDS | 45.0% | |
AATGATCACCATGCACACCA+TGG | + | chr1.4:62069856-62069875 | None:intergenic | 45.0% | |
ACATAAAGGCTGCTTGCAAG+CGG | + | chr1.4:62068947-62068966 | None:intergenic | 45.0% | |
ACCAACTTAGCTATGCTCAC+GGG | - | chr1.4:62064782-62064801 | MS.gene004844:CDS | 45.0% | |
ACCTAAGGGAGATTGGTACT+TGG | - | chr1.4:62064984-62065003 | MS.gene004844:intron | 45.0% | |
ACGCCGACACAGCTAATAAT+TGG | + | chr1.4:62065783-62065802 | None:intergenic | 45.0% | |
AGCAAACAACATACTGGGCA+GGG | + | chr1.4:62068093-62068112 | None:intergenic | 45.0% | |
ATTGCATGAGTTTCTGCGTC+AGG | - | chr1.4:62069050-62069069 | MS.gene004844:CDS | 45.0% | |
CACAGGTTCCTGACAAACAA+AGG | + | chr1.4:62065519-62065538 | None:intergenic | 45.0% | |
CAGCTTTCAAACCTTGCCAA+GGG | + | chr1.4:62068855-62068874 | None:intergenic | 45.0% | |
CAGGCATTTGCAAGAAGGAA+TGG | - | chr1.4:62069824-62069843 | MS.gene004844:intron | 45.0% | |
CAGGTAATGACACATATGGG+AGG | + | chr1.4:62068416-62068435 | None:intergenic | 45.0% | |
CAGTTCAGGCATTTGCAAGA+AGG | - | chr1.4:62069819-62069838 | MS.gene004844:intron | 45.0% | |
CGGTGTAAAGCTTTCTTGCA+GGG | + | chr1.4:62066786-62066805 | None:intergenic | 45.0% | |
CTCATCTGAAGATCTATGCC+TGG | + | chr1.4:62069879-62069898 | None:intergenic | 45.0% | |
CTGTTCTGACCTATGAAGCA+CGG | + | chr1.4:62065844-62065863 | None:intergenic | 45.0% | |
CTTCCTTCAACAGCAAGATC+TGG | - | chr1.4:62069526-62069545 | MS.gene004844:intron | 45.0% | |
CTTGGTTCACCAGAAGAGTT+TGG | + | chr1.4:62070100-62070119 | None:intergenic | 45.0% | |
GAGAATCTATCCCGAATCTC+TGG | + | chr1.4:62069794-62069813 | None:intergenic | 45.0% | |
GAGATTCGGGATAGATTCTC+GGG | - | chr1.4:62069794-62069813 | MS.gene004844:intron | 45.0% | |
GAGGCTACACACAGGTTTAT+TGG | + | chr1.4:62066586-62066605 | None:intergenic | 45.0% | |
GCAGACTATCTACTACTCAG+AGG | - | chr1.4:62070155-62070174 | MS.gene004844:intron | 45.0% | |
GCTTGTGTGTGTGAAGATCT+CGG | + | chr1.4:62067948-62067967 | None:intergenic | 45.0% | |
GGCTGAATTCAAGTCAATGC+TGG | + | chr1.4:62066298-62066317 | None:intergenic | 45.0% | |
GGGAAACCAGTCATAAATCC+AGG | - | chr1.4:62069467-62069486 | MS.gene004844:intron | 45.0% | |
GTCATTTGGAGAGCTCTACT+TGG | - | chr1.4:62064391-62064410 | MS.gene004844:CDS | 45.0% | |
GTGGAAAATTCAAGCTCGGA+AGG | - | chr1.4:62064354-62064373 | MS.gene004844:CDS | 45.0% | |
GTTCACCAGAAGAGTTTGGA+CGG | + | chr1.4:62070096-62070115 | None:intergenic | 45.0% | |
TATCACGGTGAAGGAAACCA+CGG | + | chr1.4:62066214-62066233 | None:intergenic | 45.0% | |
TCGGTGTAAAGCTTTCTTGC+AGG | + | chr1.4:62066787-62066806 | None:intergenic | 45.0% | |
TGACCTATGAAGCACGGATA+CGG | + | chr1.4:62065838-62065857 | None:intergenic | 45.0% | |
TGCTACTGCTCAAGAGCAAT+CGG | + | chr1.4:62070138-62070157 | None:intergenic | 45.0% | |
! | AGCAGGTGAAGGTTCAAGTT+TGG | + | chr1.4:62068373-62068392 | None:intergenic | 45.0% |
! | ATTTGGGATAACTGGCAGAC+AGG | - | chr1.4:62068263-62068282 | MS.gene004844:intron | 45.0% |
! | CAGGCTTTATATCACGGTGA+AGG | + | chr1.4:62066223-62066242 | None:intergenic | 45.0% |
! | GATGATTTGGACTCAAGACC+TGG | + | chr1.4:62070187-62070206 | None:intergenic | 45.0% |
! | GCAGGTGAAGGTTCAAGTTT+GGG | + | chr1.4:62068372-62068391 | None:intergenic | 45.0% |
! | GCGTTGGTCAAGTTCAACTA+AGG | - | chr1.4:62069742-62069761 | MS.gene004844:intron | 45.0% |
! | GTTGCTGGATTTGGGATAAC+TGG | - | chr1.4:62068255-62068274 | MS.gene004844:intron | 45.0% |
! | TCGGAAGGAAAATTGGTGGT+GGG | - | chr1.4:62064369-62064388 | MS.gene004844:CDS | 45.0% |
! | TGAGCCATCTTCTAAAGACG+TGG | - | chr1.4:62069895-62069914 | MS.gene004844:intron | 45.0% |
! | TGAGGATGTTTGGTCTTCAC+AGG | + | chr1.4:62065536-62065555 | None:intergenic | 45.0% |
! | TGTAGCAAGCTGATTCTGAG+AGG | - | chr1.4:62070014-62070033 | MS.gene004844:intron | 45.0% |
! | TGTCACTTGGCACTGGAAAA+AGG | - | chr1.4:62070275-62070294 | MS.gene004844:CDS | 45.0% |
! | TTTCAGGTGGACCAGAGATT+CGG | - | chr1.4:62069780-62069799 | MS.gene004844:intron | 45.0% |
! | TTTTTCCAGTGCCAAGTGAC+AGG | + | chr1.4:62070276-62070295 | None:intergenic | 45.0% |
!! | AGCTTTGAACTCCTGTCACT+TGG | - | chr1.4:62070262-62070281 | MS.gene004844:CDS | 45.0% |
!! | TGTTTTGAATGGAAGGGGAC+TGG | - | chr1.4:62066934-62066953 | MS.gene004844:intron | 45.0% |
!!! | ATATATATATATATTTTTTG+TGG | - | chr1.4:62064709-62064728 | MS.gene004844:intron | 5.0% |
AAAACCTCACTGGAACTGCC+CGG | - | chr1.4:62068547-62068566 | MS.gene004844:CDS | 50.0% | |
AAACCTTGCCAAGGGAGACT+GGG | + | chr1.4:62068847-62068866 | None:intergenic | 50.0% | |
AACTGTTTCCCAGTCTCCCT+TGG | - | chr1.4:62068836-62068855 | MS.gene004844:intron | 50.0% | |
ACTACTCAGAGGACTCAACC+AGG | - | chr1.4:62070166-62070185 | MS.gene004844:intron | 50.0% | |
ACTCTCTCTCCTGATTGTCC+TGG | + | chr1.4:62069488-62069507 | None:intergenic | 50.0% | |
AGAAGGAATGGATCTGGCCA+TGG | - | chr1.4:62069836-62069855 | MS.gene004844:intron | 50.0% | |
AGATGCCATGGCTTGAATGG+AGG | + | chr1.4:62066843-62066862 | None:intergenic | 50.0% | |
ATCACGGTGAAGGAAACCAC+GGG | + | chr1.4:62066213-62066232 | None:intergenic | 50.0% | |
ATCAGAAGTCACCGTCGCAA+AGG | + | chr1.4:62065016-62065035 | None:intergenic | 50.0% | |
ATGAAGCACGGATACGGACA+CGG | + | chr1.4:62065832-62065851 | None:intergenic | 50.0% | |
ATGCCATGGCTTGAATGGAG+GGG | + | chr1.4:62066841-62066860 | None:intergenic | 50.0% | |
CATAAAGGCTGCTTGCAAGC+GGG | + | chr1.4:62068946-62068965 | None:intergenic | 50.0% | |
CCAACTTAGCTATGCTCACG+GGG | - | chr1.4:62064783-62064802 | MS.gene004844:CDS | 50.0% | |
CCAGCTTTCAAACCTTGCCA+AGG | + | chr1.4:62068856-62068875 | None:intergenic | 50.0% | |
CCTTGGCAAGGTTTGAAAGC+TGG | - | chr1.4:62068853-62068872 | MS.gene004844:intron | 50.0% | |
CGTGACCTATTCATCCGAGA+AGG | - | chr1.4:62069177-62069196 | MS.gene004844:intron | 50.0% | |
CTCGGAAGGAAAATTGGTGG+TGG | - | chr1.4:62064368-62064387 | MS.gene004844:CDS | 50.0% | |
GACAAGGTGAAGACAACCCA+AGG | + | chr1.4:62068213-62068232 | None:intergenic | 50.0% | |
GATATGGAACCCCGTACTCA+AGG | + | chr1.4:62068023-62068042 | None:intergenic | 50.0% | |
GATGCCATGGCTTGAATGGA+GGG | + | chr1.4:62066842-62066861 | None:intergenic | 50.0% | |
GCCAAGTACCAATCTCCCTT+AGG | + | chr1.4:62064988-62065007 | None:intergenic | 50.0% | |
GTGGTCAAGTAGTAGCCTAG+TGG | - | chr1.4:62064728-62064747 | MS.gene004844:CDS | 50.0% | |
GTGGTCGTGATGATACACTC+AGG | - | chr1.4:62070239-62070258 | MS.gene004844:CDS | 50.0% | |
GTGTGCATGGTGATCATTCC+AGG | - | chr1.4:62069858-62069877 | MS.gene004844:intron | 50.0% | |
TAGATTCTCGGGTGCAGTTC+AGG | - | chr1.4:62069805-62069824 | MS.gene004844:intron | 50.0% | |
TATGAAGCACGGACACTCCT+CGG | - | chr1.4:62065668-62065687 | MS.gene004844:intron | 50.0% | |
TCAAGAGCAATCGGCTAGAG+CGG | + | chr1.4:62070129-62070148 | None:intergenic | 50.0% | |
TCCAAGGAGGTCAATTGCCA+TGG | + | chr1.4:62066002-62066021 | None:intergenic | 50.0% | |
TCCATTACTGCCGATCGTTG+CGG | - | chr1.4:62069112-62069131 | MS.gene004844:intron | 50.0% | |
TGAGGGTGACTACAATGCCA+TGG | - | chr1.4:62065982-62066001 | MS.gene004844:intron | 50.0% | |
TGCAATATGAAGGGGCCACT+AGG | + | chr1.4:62064746-62064765 | None:intergenic | 50.0% | |
TGTCCGTATCCGTGCTTCAT+AGG | - | chr1.4:62065832-62065851 | MS.gene004844:intron | 50.0% | |
TTCAGGTGGACCAGAGATTC+GGG | - | chr1.4:62069781-62069800 | MS.gene004844:intron | 50.0% | |
TTCTTGCATATGCAGGCAGC+AGG | + | chr1.4:62068390-62068409 | None:intergenic | 50.0% | |
TTTGTGCAAGGCACATCCGT+TGG | - | chr1.4:62069074-62069093 | MS.gene004844:CDS | 50.0% | |
! | AGTCTTCCAGACTTGGTCCA+AGG | + | chr1.4:62066018-62066037 | None:intergenic | 50.0% |
! | CTTGGCTGATTCCTTTGCGA+CGG | - | chr1.4:62065002-62065021 | MS.gene004844:intron | 50.0% |
!! | TACAAGTGTCGGTGTCGTGT+CGG | + | chr1.4:62065735-62065754 | None:intergenic | 50.0% |
!! | TCTGCGTCAGGTTTTGTGCA+AGG | - | chr1.4:62069062-62069081 | MS.gene004844:CDS | 50.0% |
ACCGCAACGATCGGCAGTAA+TGG | + | chr1.4:62069116-62069135 | None:intergenic | 55.0% | |
AGCAGCCGTCCAAACTCTTC+TGG | - | chr1.4:62070088-62070107 | MS.gene004844:CDS | 55.0% | |
CAAACCTTGCCAAGGGAGAC+TGG | + | chr1.4:62068848-62068867 | None:intergenic | 55.0% | |
CATATGCAGGCAGCAGGTGA+AGG | + | chr1.4:62068384-62068403 | None:intergenic | 55.0% | |
CCCCGTGAGCATAGCTAAGT+TGG | + | chr1.4:62064786-62064805 | None:intergenic | 55.0% | |
GAGAGAGTAGAACGGCCTTC+AGG | - | chr1.4:62069500-62069519 | MS.gene004844:intron | 55.0% | |
GCCATGGCAATTGACCTCCT+TGG | - | chr1.4:62065998-62066017 | MS.gene004844:intron | 55.0% | |
GGACGGCTGCTAGATAAGAC+AGG | + | chr1.4:62070079-62070098 | None:intergenic | 55.0% | |
GGATGCTGGTCCAACAGATG+TGG | + | chr1.4:62065312-62065331 | None:intergenic | 55.0% | |
GTTGAGTACATGCACTCCCG+TGG | - | chr1.4:62066194-62066213 | MS.gene004844:intron | 55.0% | |
TCTCCCCTCCATTCAAGCCA+TGG | - | chr1.4:62066835-62066854 | MS.gene004844:intron | 55.0% | |
TGACCTCCTTGGACCAAGTC+TGG | - | chr1.4:62066009-62066028 | MS.gene004844:intron | 55.0% | |
TGCTCACGGGGACGTCAATA+AGG | - | chr1.4:62064795-62064814 | MS.gene004844:CDS | 55.0% | |
TTTCCCAGTCTCCCTTGGCA+AGG | - | chr1.4:62068841-62068860 | MS.gene004844:intron | 55.0% | |
! | CTTCCAGACTTGGTCCAAGG+AGG | + | chr1.4:62066015-62066034 | None:intergenic | 55.0% |
! | GAACTCCTGTCACTTGGCAC+TGG | - | chr1.4:62070268-62070287 | MS.gene004844:CDS | 55.0% |
! | TTGGATCTAGTTCCAGGGCC+CGG | - | chr1.4:62069324-62069343 | MS.gene004844:intron | 55.0% |
!! | AATCGTGCTTCTGGGGCAAG+AGG | - | chr1.4:62070217-62070236 | MS.gene004844:intron | 55.0% |
!! | GAGGAGTGTCCGTGCTTCAT+AGG | + | chr1.4:62065669-62065688 | None:intergenic | 55.0% |
ACACGACACGTGTCCGACAC+CGG | + | chr1.4:62065706-62065725 | None:intergenic | 60.0% | |
ACGGATACGGACACGGACAC+CGG | + | chr1.4:62065825-62065844 | None:intergenic | 60.0% | |
CATACCGGGCAGTTCCAGTG+AGG | + | chr1.4:62068554-62068573 | None:intergenic | 60.0% | |
CCGCGTAGCTCTTCTCGTCA+CGG | - | chr1.4:62070037-62070056 | MS.gene004844:intron | 60.0% | |
CCGTGACGAGAAGAGCTACG+CGG | + | chr1.4:62070040-62070059 | None:intergenic | 60.0% | |
CGGCTAGAGCGGCTTTCACT+TGG | + | chr1.4:62070118-62070137 | None:intergenic | 60.0% | |
GATTAGGCGTGTCCCGGTGT+CGG | - | chr1.4:62065690-62065709 | MS.gene004844:intron | 60.0% | |
GCACGGACACTCCTCGGATT+AGG | - | chr1.4:62065674-62065693 | MS.gene004844:intron | 60.0% | |
GGATCTGGCCATGGTGTGCA+TGG | - | chr1.4:62069845-62069864 | MS.gene004844:intron | 60.0% | |
GTCAGTGTCCGTGTCGTGTC+CGG | - | chr1.4:62065803-62065822 | MS.gene004844:intron | 60.0% | |
! | TAAAGTACTCACCCGGGCCC+TGG | + | chr1.4:62069339-62069358 | None:intergenic | 60.0% |
! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr1.4:62065684-62065703 | MS.gene004844:intron | 60.0% |
! | TGGATCTAGTTCCAGGGCCC+GGG | - | chr1.4:62069325-62069344 | MS.gene004844:intron | 60.0% |
!! | TGTCGGTGTCGTGTCGGTGT+CGG | + | chr1.4:62065729-62065748 | None:intergenic | 60.0% |
ACCGGGACACGCCTAATCCG+AGG | + | chr1.4:62065688-62065707 | None:intergenic | 65.0% | |
CACGACACGTGTCCGACACC+GGG | + | chr1.4:62065705-62065724 | None:intergenic | 65.0% | |
CACGGACACCGGACACGACA+CGG | + | chr1.4:62065814-62065833 | None:intergenic | 65.0% | |
!! | CGTGCTTCTGGGGCAAGAGG+TGG | - | chr1.4:62070220-62070239 | MS.gene004844:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 62064335 | 62070303 | 62064335 | ID=MS.gene004844 |
chr1.4 | mRNA | 62064335 | 62070303 | 62064335 | ID=MS.gene004844.t1;Parent=MS.gene004844 |
chr1.4 | exon | 62070225 | 62070303 | 62070225 | ID=MS.gene004844.t1.exon1;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62070225 | 62070303 | 62070225 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
chr1.4 | exon | 62070080 | 62070120 | 62070080 | ID=MS.gene004844.t1.exon2;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62070080 | 62070120 | 62070080 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
chr1.4 | exon | 62069039 | 62069108 | 62069039 | ID=MS.gene004844.t1.exon3;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62069039 | 62069108 | 62069039 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
chr1.4 | exon | 62068539 | 62068687 | 62068539 | ID=MS.gene004844.t1.exon4;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62068539 | 62068687 | 62068539 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
chr1.4 | exon | 62068358 | 62068453 | 62068358 | ID=MS.gene004844.t1.exon5;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62068358 | 62068453 | 62068358 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
chr1.4 | exon | 62066658 | 62066728 | 62066658 | ID=MS.gene004844.t1.exon6;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62066658 | 62066728 | 62066658 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
chr1.4 | exon | 62066038 | 62066099 | 62066038 | ID=MS.gene004844.t1.exon7;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62066038 | 62066099 | 62066038 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
chr1.4 | exon | 62065868 | 62065931 | 62065868 | ID=MS.gene004844.t1.exon8;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62065868 | 62065931 | 62065868 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
chr1.4 | exon | 62065705 | 62065789 | 62065705 | ID=MS.gene004844.t1.exon9;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62065705 | 62065789 | 62065705 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
chr1.4 | exon | 62065440 | 62065566 | 62065440 | ID=MS.gene004844.t1.exon10;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62065440 | 62065566 | 62065440 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
chr1.4 | exon | 62065292 | 62065365 | 62065292 | ID=MS.gene004844.t1.exon11;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62065292 | 62065365 | 62065292 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
chr1.4 | exon | 62065117 | 62065177 | 62065117 | ID=MS.gene004844.t1.exon12;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62065117 | 62065177 | 62065117 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
chr1.4 | exon | 62064722 | 62064852 | 62064722 | ID=MS.gene004844.t1.exon13;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62064722 | 62064852 | 62064722 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
chr1.4 | exon | 62064335 | 62064619 | 62064335 | ID=MS.gene004844.t1.exon14;Parent=MS.gene004844.t1 |
chr1.4 | CDS | 62064335 | 62064619 | 62064335 | ID=cds.MS.gene004844.t1;Parent=MS.gene004844.t1 |
Gene Sequence |
Protein sequence |