AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02017

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02017.t1 MTR_2g028620 95.783 332 14 0 1 332 1 332 0.0 667
MS.gene02017.t1 MTR_2g028620 96.057 279 11 0 1 279 1 279 0.0 563
MS.gene02017.t1 MTR_5g072620 50.621 322 151 4 8 326 3 319 2.65e-112 329
MS.gene02017.t1 MTR_3g031650 46.130 323 164 4 8 326 3 319 2.95e-105 311
MS.gene02017.t1 MTR_3g031650 46.545 275 137 4 8 278 3 271 9.02e-88 265
MS.gene02017.t1 MTR_3g005170 41.088 331 181 9 1 325 1 323 7.43e-73 228
MS.gene02017.t1 MTR_3g005210 41.538 325 176 9 9 327 5 321 1.86e-71 225
MS.gene02017.t1 MTR_2g104960 40.994 322 177 6 8 326 18 329 5.69e-70 221
MS.gene02017.t1 MTR_4g006940 39.818 329 185 6 7 332 14 332 1.15e-68 218
MS.gene02017.t1 MTR_4g009040 38.957 326 187 5 5 327 8 324 1.64e-68 217
MS.gene02017.t1 MTR_4g009040 38.788 330 186 6 5 327 8 328 8.19e-67 213
MS.gene02017.t1 MTR_3g005170 43.310 284 147 9 1 278 1 276 3.90e-66 209
MS.gene02017.t1 MTR_2g101330 36.556 331 198 7 7 332 2 325 1.03e-63 205
MS.gene02017.t1 MTR_4g009690 39.571 326 185 5 5 327 8 324 2.15e-63 204
MS.gene02017.t1 MTR_4g009690 39.877 326 183 6 5 327 8 323 3.14e-63 204
MS.gene02017.t1 MTR_8g062440 37.237 333 192 10 1 327 1 322 5.29e-62 200
MS.gene02017.t1 MTR_8g062110 37.538 333 191 10 1 327 2 323 1.14e-61 199
MS.gene02017.t1 MTR_8g062110 37.994 329 187 10 1 323 11 328 1.44e-61 199
MS.gene02017.t1 MTR_4g077100 37.313 335 189 11 1 325 1 324 1.83e-61 199
MS.gene02017.t1 MTR_8g062440 37.126 334 192 11 1 327 1 323 3.72e-61 198
MS.gene02017.t1 MTR_4g006940 40.876 274 150 5 7 278 14 277 2.26e-58 190
MS.gene02017.t1 MTR_4g006940 40.876 274 150 5 7 278 14 277 2.26e-58 190
MS.gene02017.t1 MTR_3g005170 37.160 331 163 9 1 325 1 292 3.41e-58 190
MS.gene02017.t1 MTR_8g062110 40.845 284 151 10 1 278 2 274 2.16e-57 187
MS.gene02017.t1 MTR_8g062110 40.845 284 151 10 1 278 2 274 2.96e-57 187
MS.gene02017.t1 MTR_4g077130 35.185 324 196 9 8 325 7 322 7.54e-57 187
MS.gene02017.t1 MTR_1g022440 33.634 333 198 11 8 328 6 327 9.97e-57 187
MS.gene02017.t1 MTR_4g077100 39.236 288 154 11 1 278 1 277 1.11e-55 183
MS.gene02017.t1 MTR_8g062440 40.141 284 153 10 1 278 1 273 3.39e-55 183
MS.gene02017.t1 MTR_1g022445 32.432 333 202 11 8 328 6 327 5.53e-50 169
MS.gene02017.t1 MTR_5g056600 30.530 321 212 5 11 326 5 319 3.07e-47 162
MS.gene02017.t1 MTR_7g074850 33.433 335 192 12 10 326 8 329 3.51e-45 157
MS.gene02017.t1 MTR_7g074880 31.343 335 196 12 10 326 8 326 1.16e-42 150
MS.gene02017.t1 MTR_7g074820 32.537 335 195 12 10 326 8 329 2.31e-41 147
MS.gene02017.t1 MTR_7g074730 32.335 334 196 12 10 326 8 328 2.91e-41 147
MS.gene02017.t1 MTR_8g062110 37.229 231 138 5 100 327 11 237 6.34e-41 143
MS.gene02017.t1 MTR_4g092080 30.814 344 202 14 4 325 8 337 1.82e-40 145
MS.gene02017.t1 MTR_4g023730 30.473 338 210 14 4 326 2 329 2.50e-39 142
MS.gene02017.t1 MTR_7g074710 31.307 329 204 11 10 326 8 326 5.72e-38 138
MS.gene02017.t1 MTR_8g062110 42.308 182 98 5 100 278 11 188 3.08e-37 132
MS.gene02017.t1 MTR_4g081440 28.571 336 214 11 11 326 25 354 5.01e-35 131
MS.gene02017.t1 MTR_4g081440 28.571 336 213 12 11 326 21 349 3.68e-34 128
MS.gene02017.t1 MTR_7g074870 29.592 294 182 10 46 326 7 288 5.64e-29 113
MS.gene02017.t1 MTR_2g013230 31.304 345 189 14 6 316 4 334 1.67e-27 110
MS.gene02017.t1 MTR_7g117190 30.960 323 187 15 10 306 7 319 2.10e-27 110
MS.gene02017.t1 MTR_7g117190 31.399 293 173 12 10 279 7 294 2.51e-27 109
MS.gene02017.t1 MTR_2g013250 30.247 324 195 12 6 306 3 318 1.98e-25 104
MS.gene02017.t1 MTR_2g013260 29.630 324 189 12 10 306 8 319 5.08e-25 103
MS.gene02017.t1 MTR_2g013260 29.730 296 171 11 10 278 8 293 4.98e-24 100
MS.gene02017.t1 MTR_0685s0030 31.481 162 109 2 164 325 2 161 1.33e-22 92.8
MS.gene02017.t1 MTR_6g406250 28.413 271 178 8 9 271 54 316 1.34e-22 97.1
MS.gene02017.t1 MTR_5g029990 30.078 256 153 10 10 259 12 247 2.88e-22 95.1
MS.gene02017.t1 MTR_0164s0070 39.850 133 72 4 7 135 2 130 2.77e-19 85.1
MS.gene02017.t1 MTR_6g406250 28.505 214 143 6 9 216 54 263 2.56e-17 80.9
MS.gene02017.t1 MTR_0685s0030 34.783 115 73 2 164 278 2 114 2.60e-17 77.0
MS.gene02017.t1 MTR_3g011130 41.071 112 62 3 108 216 35 145 3.15e-17 77.8
MS.gene02017.t1 MTR_3g101500 27.907 258 143 13 10 254 4 231 2.01e-11 64.3
MS.gene02017.t1 MTR_3g101500 27.907 258 143 13 10 254 4 231 3.92e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02017.t1 AT2G02400 63.750 320 112 3 7 326 3 318 4.14e-157 442
MS.gene02017.t1 AT5G58490 51.212 330 150 5 1 326 1 323 8.31e-114 333
MS.gene02017.t1 AT5G19440 40.541 333 184 9 1 327 1 325 1.32e-71 225
MS.gene02017.t1 AT1G51410 40.240 333 184 10 1 327 1 324 4.73e-71 224
MS.gene02017.t1 AT1G66800 37.346 324 187 9 8 326 6 318 1.06e-64 207
MS.gene02017.t1 AT1G80820 38.820 322 184 7 8 326 6 317 1.02e-63 205
MS.gene02017.t1 AT2G33590 39.617 313 178 6 10 319 9 313 7.57e-63 202
MS.gene02017.t1 AT1G09490 36.420 324 194 8 8 326 6 322 1.52e-62 202
MS.gene02017.t1 AT1G09480 36.728 324 193 8 8 326 6 322 3.66e-62 201
MS.gene02017.t1 AT1G09480 36.728 324 193 8 8 326 53 369 7.12e-62 201
MS.gene02017.t1 AT1G09510 36.760 321 191 8 8 323 6 319 2.59e-61 199
MS.gene02017.t1 AT1G15950 38.509 322 185 7 8 326 11 322 1.22e-60 197
MS.gene02017.t1 AT1G15950 38.509 322 185 7 8 326 11 322 1.22e-60 197
MS.gene02017.t1 AT1G09500 37.152 323 190 9 8 323 6 322 9.02e-60 195
MS.gene02017.t1 AT4G35420 35.976 328 185 11 10 326 8 321 8.45e-59 192
MS.gene02017.t1 AT1G09500 39.855 276 155 7 8 278 6 275 4.55e-58 189
MS.gene02017.t1 AT1G15950 38.264 311 179 7 8 315 11 311 2.66e-57 189
MS.gene02017.t1 AT2G33600 38.339 313 182 6 10 319 9 313 6.03e-57 187
MS.gene02017.t1 AT1G80820 39.560 273 153 6 8 278 6 268 2.65e-54 179
MS.gene02017.t1 AT1G76470 37.690 329 190 9 7 328 4 324 3.14e-53 178
MS.gene02017.t1 AT1G15950 39.927 273 152 6 8 278 11 273 4.37e-53 176
MS.gene02017.t1 AT1G15950 39.927 273 152 6 8 278 11 273 6.73e-53 176
MS.gene02017.t1 AT1G15950 38.676 287 164 6 8 292 11 287 6.99e-53 176
MS.gene02017.t1 AT1G09490 35.714 280 174 6 49 326 16 291 9.56e-53 176
MS.gene02017.t1 AT5G42800 33.533 334 199 11 5 326 3 325 3.87e-51 174
MS.gene02017.t1 AT1G09500 36.071 280 172 7 48 323 12 288 1.40e-49 167
MS.gene02017.t1 AT1G68540 29.688 320 216 5 12 326 6 321 8.64e-45 155
MS.gene02017.t1 AT1G15950 38.667 225 136 2 103 326 1 224 4.35e-40 141
MS.gene02017.t1 AT1G25460 28.125 320 219 7 12 326 6 319 3.38e-37 135
MS.gene02017.t1 AT1G61720 30.769 338 200 14 11 327 14 338 6.59e-37 135
MS.gene02017.t1 AT2G23910 29.758 289 174 11 1 278 1 271 6.23e-35 129
MS.gene02017.t1 AT2G23910 29.758 289 174 11 1 278 1 271 7.34e-35 128
MS.gene02017.t1 AT2G23910 29.758 289 174 11 1 278 1 271 9.09e-35 129
MS.gene02017.t1 AT2G45400 31.487 343 193 15 9 326 39 364 2.27e-34 129
MS.gene02017.t1 AT4G27250 31.985 272 160 8 4 255 7 273 2.44e-34 129
MS.gene02017.t1 AT4G27250 32.576 264 159 8 4 255 7 263 6.35e-34 127
MS.gene02017.t1 AT2G45400 33.333 291 163 12 9 280 39 317 5.53e-33 125
MS.gene02017.t1 AT4G30470 28.369 282 186 8 1 278 1 270 1.76e-32 123
MS.gene02017.t1 AT1G68540 30.332 211 145 2 117 326 5 214 3.23e-29 112
MS.gene02017.t1 AT2G23910 31.416 226 139 8 58 278 23 237 4.74e-29 113
MS.gene02017.t1 AT2G45400 30.128 312 184 13 35 326 10 307 2.00e-25 104
MS.gene02017.t1 AT2G45400 33.628 226 124 10 9 218 39 254 4.21e-22 94.0
MS.gene02017.t1 AT5G14700 25.704 284 192 8 1 272 46 322 2.99e-21 93.6
MS.gene02017.t1 AT5G14700 25.688 218 149 6 1 209 46 259 5.34e-15 74.7
MS.gene02017.t1 AT4G33360 27.027 296 163 15 3 278 8 270 5.52e-13 68.9
MS.gene02017.t1 AT4G33360 27.027 296 163 15 3 278 8 270 1.25e-12 68.2
MS.gene02017.t1 AT4G33360 27.336 289 157 15 10 278 3 258 1.42e-12 68.2

Find 109 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCATCCGGGGACTTGTTT+GGG 0.190696 2.2:+59057005 MS.gene02017:CDS
GGTTCATCCGGGGACTTGTT+TGG 0.250224 2.2:+59057004 MS.gene02017:CDS
GTACAATTCAGAGACAATTT+TGG 0.258453 2.2:-59057231 None:intergenic
AGGATACACAGGAGTGTTAT+TGG 0.278881 2.2:+59057093 MS.gene02017:CDS
GAGATGAGATGGGTCGGAAT+TGG 0.285013 2.2:-59055956 None:intergenic
AACAGGTACCAAACCCTAAT+TGG 0.293395 2.2:+59056835 MS.gene02017:intron
GGTAGATATCTTTGTGTAAA+TGG 0.296279 2.2:+59057185 MS.gene02017:CDS
AGATGAGATGGGTCGGAATT+GGG 0.298603 2.2:-59055955 None:intergenic
CTCCTTGCTGCCTCTTTACA+TGG 0.310065 2.2:-59059275 None:intergenic
CAACAAACTAACCTGTGAAT+AGG 0.318964 2.2:-59057263 None:intergenic
CAAACCAGGTTGAGTTTCAT+TGG 0.321402 2.2:-59059249 None:intergenic
GTGATGCGAGATTGGACTTC+GGG 0.341203 2.2:-59055991 None:intergenic
AACCTGTGAATAGGGAAATC+AGG 0.352018 2.2:-59057254 None:intergenic
GGATGTGGTTGCGGTTCATC+CGG 0.364594 2.2:+59056992 MS.gene02017:CDS
AACAAACTAACCTGTGAATA+GGG 0.371575 2.2:-59057262 None:intergenic
AACGCCATCAACGGTTGTTC+CGG 0.383595 2.2:+59056054 MS.gene02017:CDS
AAACCAGGTTGAGTTTCATT+GGG 0.396431 2.2:-59059248 None:intergenic
TGTTGCTAGAGCTCATGTTT+TGG 0.403565 2.2:+59057139 MS.gene02017:CDS
GGAAGATGGTGATGCGAGAT+TGG 0.414029 2.2:-59055999 None:intergenic
GAACAGTACCATGGCTGAAA+TGG 0.414099 2.2:-59056220 None:intergenic
GAAGAGGTGGTATGCGTAAC+CGG 0.416027 2.2:+59055847 MS.gene02017:CDS
TCCGATGAAGCCGTTTGCTC+CGG 0.438339 2.2:-59055866 None:intergenic
CCCTAATTGGCCGGAAAACA+AGG 0.442577 2.2:+59056848 MS.gene02017:CDS
GTGTTGCAGAGGTTGATGAT+AGG 0.447034 2.2:+59057065 MS.gene02017:CDS
GTGGAGTCGAGGATGTTAAC+GGG 0.447189 2.2:-59056021 None:intergenic
GATGTGGTTGCGGTTCATCC+GGG 0.451887 2.2:+59056993 MS.gene02017:CDS
AGAAGCAGCAGAGAGCCTTA+TGG 0.457443 2.2:+59059346 MS.gene02017:CDS
GGTGGAGTCGAGGATGTTAA+CGG 0.462156 2.2:-59056022 None:intergenic
GATGAGATGGGTCGGAATTG+GGG 0.465942 2.2:-59055954 None:intergenic
ACACAGGAGTGTTATTGGTT+GGG 0.472859 2.2:+59057098 MS.gene02017:CDS
TCTGTGAGGGTGTTCTCTGC+AGG 0.481108 2.2:-59059379 None:intergenic
GAGGTTGATGATAGGGGAGA+AGG 0.482957 2.2:+59057073 MS.gene02017:CDS
TATGAGACTCCAACTGCTGC+TGG 0.483927 2.2:+59057164 MS.gene02017:CDS
AGCAAGGAGGCTAATAGACT+TGG 0.485224 2.2:+59059289 MS.gene02017:CDS
GTTGGGTCTTCGAGAGTGCA+TGG 0.487055 2.2:-59056096 None:intergenic
GACACCGGAACAACCGTTGA+TGG 0.489818 2.2:-59056058 None:intergenic
TGGAGTGTGAAGAGATGAGA+TGG 0.492392 2.2:-59055967 None:intergenic
GCAGGAAGCCTTTAGCCATA+AGG 0.492757 2.2:-59059361 None:intergenic
TACACAGGAGTGTTATTGGT+TGG 0.496690 2.2:+59057097 MS.gene02017:CDS
CTTCTAGAACCCGCTGTACA+AGG 0.497745 2.2:+59056135 MS.gene02017:CDS
AGGCGATCGACGAGGGGTCG+TGG 0.497893 2.2:+59056868 MS.gene02017:CDS
TGGCGGTGTGGATGTGGTTG+CGG 0.500100 2.2:+59056983 MS.gene02017:CDS
TGTTGCAGAGGTTGATGATA+GGG 0.501372 2.2:+59057066 MS.gene02017:CDS
TTCTCTGATAGCATCTTGAA+TGG 0.506033 2.2:-59059327 None:intergenic
AGACCCAACCGATCCTCAAA+AGG 0.510426 2.2:+59056110 MS.gene02017:CDS
ACCCTGATTTCCCTATTCAC+AGG 0.516405 2.2:+59057252 MS.gene02017:CDS
TACATCCTCCATTTCAGCCA+TGG 0.518605 2.2:+59056212 MS.gene02017:CDS
TTGGGTCTTCGAGAGTGCAT+GGG 0.521564 2.2:-59056095 None:intergenic
TCTTTACATGGTGTCAAACC+AGG 0.528461 2.2:-59059263 None:intergenic
ACCGGAGCAAACGGCTTCAT+CGG 0.530605 2.2:+59055865 MS.gene02017:CDS
CAAACGGCTTCATCGGATCA+TGG 0.532647 2.2:+59055872 MS.gene02017:CDS
TTCATCCGGGGACTTGTTTG+GGG 0.533582 2.2:+59057006 MS.gene02017:CDS
TTGAGTACTGTAAGTTGAGG+GGG 0.537549 2.2:+59056898 MS.gene02017:CDS
GGAGGCAGAGAAGGCGGCGT+GGG 0.539446 2.2:+59056944 MS.gene02017:CDS
GAGGATGTTAACGGGGAAGA+TGG 0.539550 2.2:-59056013 None:intergenic
TCTCTGATAGCATCTTGAAT+GGG 0.543790 2.2:-59059326 None:intergenic
GAAACATGGCGGTGTGGATG+TGG 0.544953 2.2:+59056977 MS.gene02017:CDS
GTTAAGCGTTCCTTGTACAG+CGG 0.545666 2.2:-59056145 None:intergenic
TTAAGCGTTCCTTGTACAGC+GGG 0.546122 2.2:-59056144 None:intergenic
ACCTGTGAATAGGGAAATCA+GGG 0.549816 2.2:-59057253 None:intergenic
ACCGTTGATGGCGTTTGAGA+CGG 0.550186 2.2:-59056046 None:intergenic
GCAGAGAGCCTTATGGCTAA+AGG 0.550371 2.2:+59059353 MS.gene02017:CDS
AACGGCCCCAAACAAGTCCC+CGG 0.554551 2.2:-59057011 None:intergenic
GTATGCGTAACCGGAGCAAA+CGG 0.559145 2.2:+59055856 MS.gene02017:CDS
TTCATCTGATTCTGAAGCAA+CGG 0.559808 2.2:-59057029 None:intergenic
TGTGAAGAGATGAGATGGGT+CGG 0.562015 2.2:-59055962 None:intergenic
GAGTGCATGGGGAAGCGACA+TGG 0.563550 2.2:-59056083 None:intergenic
GATGGCGTTTGAGACGGCGG+TGG 0.568922 2.2:-59056040 None:intergenic
GGTACCAAACCCTAATTGGC+CGG 0.574374 2.2:+59056839 MS.gene02017:intron
TTGAGACGGCGGTGGAGTCG+AGG 0.575851 2.2:-59056032 None:intergenic
TGGTTTGACACCATGTAAAG+AGG 0.576793 2.2:+59059265 MS.gene02017:CDS
AGATATCTACCAGCAGCAGT+TGG 0.580401 2.2:-59057173 None:intergenic
GGTGATGCGAGATTGGACTT+CGG 0.583893 2.2:-59055992 None:intergenic
CAGTACCATGGCTGAAATGG+AGG 0.585904 2.2:-59056217 None:intergenic
CACCATGTAAAGAGGCAGCA+AGG 0.589861 2.2:+59059273 MS.gene02017:CDS
GTCGGAATTGGGGAAGATTG+TGG 0.590482 2.2:-59055944 None:intergenic
TGTTGAGTACTGTAAGTTGA+GGG 0.594185 2.2:+59056896 MS.gene02017:CDS
GCCGTCTCAAACGCCATCAA+CGG 0.596254 2.2:+59056045 MS.gene02017:CDS
GCAAGGAGGCTAATAGACTT+GGG 0.598043 2.2:+59059290 MS.gene02017:CDS
ATGTGGTTGCGGTTCATCCG+GGG 0.599946 2.2:+59056994 MS.gene02017:CDS
CGGAGGCAGAGAAGGCGGCG+TGG 0.600499 2.2:+59056943 MS.gene02017:CDS
TTCCCCAATGAAACTCAACC+TGG 0.602160 2.2:+59059245 MS.gene02017:CDS
GAAAACAAGGCGATCGACGA+GGG 0.603727 2.2:+59056861 MS.gene02017:CDS
ACGCGTGGGTTTAAAGCGCG+TGG 0.609080 2.2:+59056185 MS.gene02017:CDS
TCTGAATTCTAATTCTGTGA+GGG 0.612064 2.2:-59059392 None:intergenic
GGAGTGTGAAGAGATGAGAT+GGG 0.617441 2.2:-59055966 None:intergenic
GTTGCAGAGGTTGATGATAG+GGG 0.623779 2.2:+59057067 MS.gene02017:CDS
CAAGTTCTGCGGTGTTGCAG+AGG 0.625094 2.2:+59057054 MS.gene02017:CDS
GATAGGGGAGAAGGATACAC+AGG 0.626352 2.2:+59057082 MS.gene02017:CDS
AACCAGGTTGAGTTTCATTG+GGG 0.634036 2.2:-59059247 None:intergenic
CTAGAAGCAGCAAAACGCGT+GGG 0.635361 2.2:+59056171 MS.gene02017:CDS
TCTAGAAGCAGCAAAACGCG+TGG 0.636535 2.2:+59056170 MS.gene02017:CDS
AAGCGAAAACAGAGAAGAGG+TGG 0.637921 2.2:+59055834 MS.gene02017:CDS
GTTGATGGCGTTTGAGACGG+CGG 0.638212 2.2:-59056043 None:intergenic
TGGGTCTTCGAGAGTGCATG+GGG 0.640380 2.2:-59056094 None:intergenic
AAAACAAGGCGATCGACGAG+GGG 0.649081 2.2:+59056862 MS.gene02017:CDS
ATCTGAATTCTAATTCTGTG+AGG 0.652851 2.2:-59059393 None:intergenic
GACAAGCGAAAACAGAGAAG+AGG 0.654242 2.2:+59055831 MS.gene02017:CDS
TGATGCGAGATTGGACTTCG+GGG 0.654582 2.2:-59055990 None:intergenic
TGCGAGATTGGACTTCGGGG+TGG 0.657068 2.2:-59055987 None:intergenic
AATTGGGGAAGATTGTGGCG+TGG 0.664361 2.2:-59055939 None:intergenic
ATGTTGAGTACTGTAAGTTG+AGG 0.666689 2.2:+59056895 MS.gene02017:CDS
GGAAAACAAGGCGATCGACG+AGG 0.671794 2.2:+59056860 MS.gene02017:CDS
TCAGATGAATGCAAGTTCTG+CGG 0.685254 2.2:+59057043 MS.gene02017:CDS
GGAAGCGACATGGAAGACAC+CGG 0.703786 2.2:-59056073 None:intergenic
TTGTGAGAAACATGGCGGTG+TGG 0.718018 2.2:+59056971 MS.gene02017:CDS
TGGAGTCGAGGATGTTAACG+GGG 0.719755 2.2:-59056020 None:intergenic
GTTGAGTACTGTAAGTTGAG+GGG 0.720390 2.2:+59056897 MS.gene02017:CDS
CATGTAAAGAGGCAGCAAGG+AGG 0.754068 2.2:+59059276 MS.gene02017:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACCAAAAATTAATATTAATC+CGG + chr2.2:59059103-59059122 MS.gene02017:intron 15.0%
!! ATAAAAAATCAATAGACAAT+TGG + chr2.2:59058075-59058094 MS.gene02017:intron 15.0%
!! TATTATTTATTGAAACTCTT+CGG + chr2.2:59057747-59057766 MS.gene02017:intron 15.0%
!!! AAAATTGATTTTTAGTGAAT+TGG - chr2.2:59056730-59056749 None:intergenic 15.0%
!!! ATTAAAATCACTTTTAGATT+AGG + chr2.2:59057412-59057431 MS.gene02017:intron 15.0%
!!! TAAAAATCAATTTTTGTCAA+CGG + chr2.2:59056736-59056755 MS.gene02017:intron 15.0%
!!! TTATTTTATGCAATTAAGAT+CGG + chr2.2:59059039-59059058 MS.gene02017:intron 15.0%
!! AGAATAGATAATTGTATGTT+TGG - chr2.2:59056766-59056785 None:intergenic 20.0%
!! AGAATTGATTATAACAAGTT+TGG + chr2.2:59056528-59056547 MS.gene02017:intron 20.0%
!! ATGATAAATCTAGATTTGAA+TGG - chr2.2:59058732-59058751 None:intergenic 20.0%
!! TATTACATATGTGATGTAAA+AGG + chr2.2:59058329-59058348 MS.gene02017:intron 20.0%
!! TTATATATCATTCAAAGTAG+CGG - chr2.2:59058203-59058222 None:intergenic 20.0%
!!! AATATTAATTTTTGGTATCC+AGG - chr2.2:59059099-59059118 None:intergenic 20.0%
!!! AATGTTATTTCTATGATGAA+TGG - chr2.2:59057335-59057354 None:intergenic 20.0%
!!! ACCGGATTAATATTAATTTT+TGG - chr2.2:59059107-59059126 None:intergenic 20.0%
!!! AGTTTAAACTTTAAAGCATT+GGG + chr2.2:59057981-59058000 MS.gene02017:intron 20.0%
! AAGAACTTAACAGAGATATT+TGG + chr2.2:59057857-59057876 MS.gene02017:intron 25.0%
! AATAAGTTATTGAGAAAAGC+CGG + chr2.2:59058363-59058382 MS.gene02017:intron 25.0%
! AGAAATAACATTTGTTTCCT+TGG + chr2.2:59057343-59057362 MS.gene02017:intron 25.0%
! AGAACTTAACAGAGATATTT+GGG + chr2.2:59057858-59057877 MS.gene02017:intron 25.0%
! ATCAAACTAACTTTAAACCA+AGG - chr2.2:59057363-59057382 None:intergenic 25.0%
! ATGTTCAATAAAGAAGTGAT+AGG - chr2.2:59058951-59058970 None:intergenic 25.0%
! CACTTCTTTATTGAACATAT+GGG + chr2.2:59058953-59058972 MS.gene02017:intron 25.0%
! GAAAACAGTTCAACATATTT+GGG + chr2.2:59058799-59058818 MS.gene02017:intron 25.0%
! GTAGTTAAGTCAAACAAATA+CGG + chr2.2:59057488-59057507 MS.gene02017:intron 25.0%
! GTTAAGTTCTTCTTTAGATA+AGG - chr2.2:59057848-59057867 None:intergenic 25.0%
! TCACAATAGAAATCAATCTT+TGG + chr2.2:59058291-59058310 MS.gene02017:intron 25.0%
! TCACTTCTTTATTGAACATA+TGG + chr2.2:59058952-59058971 MS.gene02017:intron 25.0%
! TCTAAATTAATCATTTGCCA+TGG - chr2.2:59058979-59058998 None:intergenic 25.0%
! TGAAAACAGTTCAACATATT+TGG + chr2.2:59058798-59058817 MS.gene02017:intron 25.0%
! TGTTCAATAAAGAAGTGATA+GGG - chr2.2:59058950-59058969 None:intergenic 25.0%
! TTGTTGTATGTTGTGTTTAT+GGG + chr2.2:59057780-59057799 MS.gene02017:intron 25.0%
! TTTAAGAAACTGATGTTGTT+TGG - chr2.2:59058486-59058505 None:intergenic 25.0%
! TTTCTATTGTGATCTATGAT+TGG - chr2.2:59058283-59058302 None:intergenic 25.0%
!! TACAGCTATAGAATCAATTT+TGG - chr2.2:59056509-59056528 None:intergenic 25.0%
!! TGAGTGTTATTATCAATGAT+AGG - chr2.2:59056625-59056644 None:intergenic 25.0%
!! TTTGTTGTATGTTGTGTTTA+TGG + chr2.2:59057779-59057798 MS.gene02017:intron 25.0%
!! TTTTCCTTTCCTTTTTCTAT+TGG + chr2.2:59057930-59057949 MS.gene02017:intron 25.0%
!!! AGTAATATTGAAAGCACTAA+CGG + chr2.2:59058051-59058070 MS.gene02017:intron 25.0%
!!! ATAAGTTTTGTGAGATTGTT+TGG - chr2.2:59056416-59056435 None:intergenic 25.0%
!!! GAGTTTAAACTTTAAAGCAT+TGG + chr2.2:59057980-59057999 MS.gene02017:intron 25.0%
!!! TCTCTTTTCTCTTTTAAAAC+TGG - chr2.2:59058442-59058461 None:intergenic 25.0%
!!! TGGGTTTTGTTTTGATAATA+GGG - chr2.2:59055908-59055927 None:intergenic 25.0%
!!! TTTGTTTTTGAAGCGAATTA+AGG + chr2.2:59058228-59058247 MS.gene02017:intron 25.0%
AACAAACTAACCTGTGAATA+GGG - chr2.2:59057265-59057284 None:intergenic 30.0%
AACAAGAAGAGAACATAACA+TGG - chr2.2:59057307-59057326 None:intergenic 30.0%
AACACAACATACAACAAAGA+TGG - chr2.2:59057777-59057796 None:intergenic 30.0%
AACATCAGTTTCTTAAACCT+AGG + chr2.2:59058489-59058508 MS.gene02017:intron 30.0%
AGTTCTTCTTTAGATAAGGT+TGG - chr2.2:59057844-59057863 None:intergenic 30.0%
CTGTAATAATTTCAGCCATT+GGG - chr2.2:59058874-59058893 None:intergenic 30.0%
GGTAGATATCTTTGTGTAAA+TGG + chr2.2:59057185-59057204 MS.gene02017:CDS 30.0%
GTTCAATAAAGAAGTGATAG+GGG - chr2.2:59058949-59058968 None:intergenic 30.0%
TATAAATCTCTGCTCTTACT+TGG - chr2.2:59058573-59058592 None:intergenic 30.0%
TCTGTAATAATTTCAGCCAT+TGG - chr2.2:59058875-59058894 None:intergenic 30.0%
TTCAATAAAGAAGTGATAGG+GGG - chr2.2:59058948-59058967 None:intergenic 30.0%
TTTAGAGAAAAGTGATGCTA+TGG + chr2.2:59058993-59059012 MS.gene02017:intron 30.0%
! ACCTTTGCATTAGATTTTTC+CGG - chr2.2:59058385-59058404 None:intergenic 30.0%
! ATGAGTTGGATCAAGAAAAA+GGG + chr2.2:59058831-59058850 MS.gene02017:intron 30.0%
! GTACAATTCAGAGACAATTT+TGG - chr2.2:59057234-59057253 None:intergenic 30.0%
!! AGCTTTTCAGCTTTTTCTTT+TGG + chr2.2:59058695-59058714 MS.gene02017:intron 30.0%
!! GTAATATTGAAAGCACTAAC+GGG + chr2.2:59058052-59058071 MS.gene02017:intron 30.0%
!!! GTGGGTTTTGTTTTGATAAT+AGG - chr2.2:59055909-59055928 None:intergenic 30.0%
!!! TTTTTGAAGCGAATTAAGGA+AGG + chr2.2:59058232-59058251 MS.gene02017:intron 30.0%
AACATATAGCAATGCCTGTT+TGG - chr2.2:59056467-59056486 None:intergenic 35.0%
AAGAATCTATCTATGCAGTG+TGG + chr2.2:59058603-59058622 MS.gene02017:intron 35.0%
AAGAGAACATAACATGGCAT+GGG - chr2.2:59057301-59057320 None:intergenic 35.0%
ACAGAAGAATAGTGCTAACA+AGG - chr2.2:59058900-59058919 None:intergenic 35.0%
ACCAGTATATGTTCACTCAA+TGG - chr2.2:59058639-59058658 None:intergenic 35.0%
AGATTTATCATCATCACGCA+TGG + chr2.2:59058741-59058760 MS.gene02017:intron 35.0%
AGCTTCAGTCCAATAGAAAA+AGG - chr2.2:59057942-59057961 None:intergenic 35.0%
ATTTATCATCATCACGCATG+GGG + chr2.2:59058743-59058762 MS.gene02017:intron 35.0%
CAACAAACTAACCTGTGAAT+AGG - chr2.2:59057266-59057285 None:intergenic 35.0%
CAGTCCAATAGAAAAAGGAA+AGG - chr2.2:59057937-59057956 None:intergenic 35.0%
CAGTTTCTTAAACCTAGGTT+TGG + chr2.2:59058494-59058513 MS.gene02017:intron 35.0%
CATTGGGAAACAATACAATG+GGG - chr2.2:59058858-59058877 None:intergenic 35.0%
CCAGTATATGTTCACTCAAT+GGG - chr2.2:59058638-59058657 None:intergenic 35.0%
CCATTGGGAAACAATACAAT+GGG - chr2.2:59058859-59058878 None:intergenic 35.0%
CCTATTTCATGTAGGAAAAC+AGG + chr2.2:59059069-59059088 MS.gene02017:intron 35.0%
GATTTATCATCATCACGCAT+GGG + chr2.2:59058742-59058761 MS.gene02017:intron 35.0%
GGTTGACACTATTACAAAGA+TGG - chr2.2:59057823-59057842 None:intergenic 35.0%
GTTAGCTACCTATTTCATGT+AGG + chr2.2:59059061-59059080 MS.gene02017:intron 35.0%
TATGAATGAGAACAGTACCA+TGG - chr2.2:59056232-59056251 None:intergenic 35.0%
TATTACTTCTCAATCACCAC+AGG - chr2.2:59058038-59058057 None:intergenic 35.0%
TCAAATCAGTCAATCCAAAC+AGG + chr2.2:59056450-59056469 MS.gene02017:intron 35.0%
TCAATAAAGAAGTGATAGGG+GGG - chr2.2:59058947-59058966 None:intergenic 35.0%
TCTCTGATAGCATCTTGAAT+GGG - chr2.2:59059329-59059348 None:intergenic 35.0%
TTCTCTGATAGCATCTTGAA+TGG - chr2.2:59059330-59059349 None:intergenic 35.0%
TTTATTGAACATATGGGCCA+TGG + chr2.2:59058959-59058978 MS.gene02017:intron 35.0%
! AAACCAGGTTGAGTTTCATT+GGG - chr2.2:59059251-59059270 None:intergenic 35.0%
! ACTAGCTAAAAGTGAGTTGA+AGG - chr2.2:59056692-59056711 None:intergenic 35.0%
! ATGTTGAGTACTGTAAGTTG+AGG + chr2.2:59056895-59056914 MS.gene02017:CDS 35.0%
! CATGAGTTGGATCAAGAAAA+AGG + chr2.2:59058830-59058849 MS.gene02017:intron 35.0%
! CCTGTTTTCCTACATGAAAT+AGG - chr2.2:59059072-59059091 None:intergenic 35.0%
! GACATTTTGTCTTGATGAAG+TGG + chr2.2:59058142-59058161 MS.gene02017:intron 35.0%
! TGTTGAGTACTGTAAGTTGA+GGG + chr2.2:59056896-59056915 MS.gene02017:CDS 35.0%
!! CTATAGAATCAATTTTGGCC+CGG - chr2.2:59056504-59056523 None:intergenic 35.0%
!! TAGAAGTTCCTTTTGAGGAT+CGG - chr2.2:59056121-59056140 None:intergenic 35.0%
!! TTAAAGCATTGGGTGATGAT+TGG + chr2.2:59057991-59058010 MS.gene02017:intron 35.0%
!! TTCATCTGATTCTGAAGCAA+CGG - chr2.2:59057032-59057051 None:intergenic 35.0%
AAATAACCTACTGCACGTGA+GGG + chr2.2:59057607-59057626 MS.gene02017:intron 40.0%
AACAGGTACCAAACCCTAAT+TGG + chr2.2:59056835-59056854 MS.gene02017:intron 40.0%
AACCTGTGAATAGGGAAATC+AGG - chr2.2:59057257-59057276 None:intergenic 40.0%
ACCTGTGAATAGGGAAATCA+GGG - chr2.2:59057256-59057275 None:intergenic 40.0%
AGTAAATTTGTCCCTCCAAC+AGG + chr2.2:59056818-59056837 MS.gene02017:intron 40.0%
ATGTTTGCGTTCACTTCTAC+CGG + chr2.2:59056482-59056501 MS.gene02017:intron 40.0%
CACAGGCTTGTAATAGCTAA+AGG - chr2.2:59058021-59058040 None:intergenic 40.0%
CCCATTGAGTGAACATATAC+TGG + chr2.2:59058635-59058654 MS.gene02017:intron 40.0%
CCCATTGTATTGTTTCCCAA+TGG + chr2.2:59058856-59058875 MS.gene02017:intron 40.0%
CCCTATCTTCTTTGCTAGTT+CGG - chr2.2:59057640-59057659 None:intergenic 40.0%
CCGAACTAGCAAAGAAGATA+GGG + chr2.2:59057637-59057656 MS.gene02017:intron 40.0%
CCTATCTTCTTTGCTAGTTC+GGG - chr2.2:59057639-59057658 None:intergenic 40.0%
CTTTAGCTATTACAAGCCTG+TGG + chr2.2:59058019-59058038 MS.gene02017:intron 40.0%
GAAAAGCTCAAGAGACATCT+AGG - chr2.2:59058683-59058702 None:intergenic 40.0%
GAAGAGAACATAACATGGCA+TGG - chr2.2:59057302-59057321 None:intergenic 40.0%
GCCATTGGGAAACAATACAA+TGG - chr2.2:59058860-59058879 None:intergenic 40.0%
GCCGGAAAAATCTAATGCAA+AGG + chr2.2:59058381-59058400 MS.gene02017:intron 40.0%
GTTTATGTGCAGAATGCAGA+TGG + chr2.2:59057693-59057712 MS.gene02017:intron 40.0%
TAAATAACCTACTGCACGTG+AGG + chr2.2:59057606-59057625 MS.gene02017:intron 40.0%
TCAGATGAATGCAAGTTCTG+CGG + chr2.2:59057043-59057062 MS.gene02017:CDS 40.0%
TGATGAAGTGGCTGTAATCT+TGG + chr2.2:59058154-59058173 MS.gene02017:intron 40.0%
TGGTTTGACACCATGTAAAG+AGG + chr2.2:59059265-59059284 MS.gene02017:CDS 40.0%
! AACCAGGTTGAGTTTCATTG+GGG - chr2.2:59059250-59059269 None:intergenic 40.0%
! AATTAGGGTTTGGTACCTGT+TGG - chr2.2:59056836-59056855 None:intergenic 40.0%
! ATGAGTTTGGTTCCAAACCT+AGG - chr2.2:59058509-59058528 None:intergenic 40.0%
! CAAACCAGGTTGAGTTTCAT+TGG - chr2.2:59059252-59059271 None:intergenic 40.0%
! GTTGAGTACTGTAAGTTGAG+GGG + chr2.2:59056897-59056916 MS.gene02017:CDS 40.0%
! TCTTTACATGGTGTCAAACC+AGG - chr2.2:59059266-59059285 None:intergenic 40.0%
! TGTTGCTAGAGCTCATGTTT+TGG + chr2.2:59057139-59057158 MS.gene02017:CDS 40.0%
! TTGAGTACTGTAAGTTGAGG+GGG + chr2.2:59056898-59056917 MS.gene02017:CDS 40.0%
! TTGGGTTCAAAAGCATGAGT+TGG + chr2.2:59058817-59058836 MS.gene02017:intron 40.0%
!! ACACAGGAGTGTTATTGGTT+GGG + chr2.2:59057098-59057117 MS.gene02017:CDS 40.0%
!! AGGATACACAGGAGTGTTAT+TGG + chr2.2:59057093-59057112 MS.gene02017:CDS 40.0%
!! GAGTTTTGTGAGAAACATGG+CGG + chr2.2:59056966-59056985 MS.gene02017:CDS 40.0%
!! TACACAGGAGTGTTATTGGT+TGG + chr2.2:59057097-59057116 MS.gene02017:CDS 40.0%
!! TGGGAGTTTTGTGAGAAACA+TGG + chr2.2:59056963-59056982 MS.gene02017:CDS 40.0%
!! TGTTGCAGAGGTTGATGATA+GGG + chr2.2:59057066-59057085 MS.gene02017:CDS 40.0%
!!! GGTTCTAGAAGTTCCTTTTG+AGG - chr2.2:59056126-59056145 None:intergenic 40.0%
AAGCGAAAACAGAGAAGAGG+TGG + chr2.2:59055834-59055853 MS.gene02017:CDS 45.0%
ACCCTGATTTCCCTATTCAC+AGG + chr2.2:59057252-59057271 MS.gene02017:CDS 45.0%
AGATATCTACCAGCAGCAGT+TGG - chr2.2:59057176-59057195 None:intergenic 45.0%
AGATGAGATGGGTCGGAATT+GGG - chr2.2:59055958-59055977 None:intergenic 45.0%
AGCAAGGAGGCTAATAGACT+TGG + chr2.2:59059289-59059308 MS.gene02017:CDS 45.0%
CCACAGCTACTAGAAACGTT+CGG - chr2.2:59057583-59057602 None:intergenic 45.0%
CCCGAACTAGCAAAGAAGAT+AGG + chr2.2:59057636-59057655 MS.gene02017:intron 45.0%
CTACTCCATAGCAGCACATT+TGG - chr2.2:59058543-59058562 None:intergenic 45.0%
CTGTCCTATAGTCGTCTATC+CGG + chr2.2:59057532-59057551 MS.gene02017:intron 45.0%
GAACAGTACCATGGCTGAAA+TGG - chr2.2:59056223-59056242 None:intergenic 45.0%
GACAAGCGAAAACAGAGAAG+AGG + chr2.2:59055831-59055850 MS.gene02017:CDS 45.0%
GACGACTATAGGACAGAACT+AGG - chr2.2:59057528-59057547 None:intergenic 45.0%
GCAAGGAGGCTAATAGACTT+GGG + chr2.2:59059290-59059309 MS.gene02017:CDS 45.0%
GGAGCTGGCAAATATGAGTT+TGG - chr2.2:59058522-59058541 None:intergenic 45.0%
GGAGTGTGAAGAGATGAGAT+GGG - chr2.2:59055969-59055988 None:intergenic 45.0%
GTGGTATCCCGTGTCAAAAA+CGG + chr2.2:59056923-59056942 MS.gene02017:CDS 45.0%
GTTAAGCGTTCCTTGTACAG+CGG - chr2.2:59056148-59056167 None:intergenic 45.0%
TACATCCTCCATTTCAGCCA+TGG + chr2.2:59056212-59056231 MS.gene02017:CDS 45.0%
TGGAGTGTGAAGAGATGAGA+TGG - chr2.2:59055970-59055989 None:intergenic 45.0%
TGTAGGAAAACAGGACAACC+TGG + chr2.2:59059078-59059097 MS.gene02017:intron 45.0%
TGTCCTATAGTCGTCTATCC+GGG + chr2.2:59057533-59057552 MS.gene02017:intron 45.0%
TGTGAAGAGATGAGATGGGT+CGG - chr2.2:59055965-59055984 None:intergenic 45.0%
TGTTTGCGTTCACTTCTACC+GGG + chr2.2:59056483-59056502 MS.gene02017:intron 45.0%
TTAAGCGTTCCTTGTACAGC+GGG - chr2.2:59056147-59056166 None:intergenic 45.0%
TTCCCCAATGAAACTCAACC+TGG + chr2.2:59059245-59059264 MS.gene02017:CDS 45.0%
! TTTTCCGGCCAATTAGGGTT+TGG - chr2.2:59056846-59056865 None:intergenic 45.0%
!! AGTTCCTTTTGAGGATCGGT+TGG - chr2.2:59056117-59056136 None:intergenic 45.0%
!! CGAACGTTTCTAGTAGCTGT+GGG + chr2.2:59057581-59057600 MS.gene02017:intron 45.0%
!! GTGTTGCAGAGGTTGATGAT+AGG + chr2.2:59057065-59057084 MS.gene02017:CDS 45.0%
!! GTTCCTTTTGAGGATCGGTT+GGG - chr2.2:59056116-59056135 None:intergenic 45.0%
!! GTTGCAGAGGTTGATGATAG+GGG + chr2.2:59057067-59057086 MS.gene02017:CDS 45.0%
!!! CCTTGTTTTCCGGCCAATTA+GGG - chr2.2:59056851-59056870 None:intergenic 45.0%
!! ATTTAATTAAAAAATTTAAC+CGG - chr2.2:59059125-59059144 None:intergenic 5.0%
!! TATAGAATTATAATAAAAAA+TGG - chr2.2:59057664-59057683 None:intergenic 5.0%
AAAAACGGAGGCAGAGAAGG+CGG + chr2.2:59056938-59056957 MS.gene02017:CDS 50.0%
AAAACAAGGCGATCGACGAG+GGG + chr2.2:59056862-59056881 MS.gene02017:CDS 50.0%
AACGCCATCAACGGTTGTTC+CGG + chr2.2:59056054-59056073 MS.gene02017:CDS 50.0%
AATTGGGGAAGATTGTGGCG+TGG - chr2.2:59055942-59055961 None:intergenic 50.0%
AGAAGCAGCAGAGAGCCTTA+TGG + chr2.2:59059346-59059365 MS.gene02017:CDS 50.0%
AGACCCAACCGATCCTCAAA+AGG + chr2.2:59056110-59056129 MS.gene02017:CDS 50.0%
CAAACGGCTTCATCGGATCA+TGG + chr2.2:59055872-59055891 MS.gene02017:CDS 50.0%
CACCATGTAAAGAGGCAGCA+AGG + chr2.2:59059273-59059292 MS.gene02017:CDS 50.0%
CAGTACCATGGCTGAAATGG+AGG - chr2.2:59056220-59056239 None:intergenic 50.0%
CATGTAAAGAGGCAGCAAGG+AGG + chr2.2:59059276-59059295 MS.gene02017:CDS 50.0%
CCATATTCTAGACTGCCTCC+CGG - chr2.2:59057554-59057573 None:intergenic 50.0%
CCCTAATTGGCCGGAAAACA+AGG + chr2.2:59056848-59056867 MS.gene02017:CDS 50.0%
CTAGAAGCAGCAAAACGCGT+GGG + chr2.2:59056171-59056190 MS.gene02017:CDS 50.0%
CTCCTTGCTGCCTCTTTACA+TGG - chr2.2:59059278-59059297 None:intergenic 50.0%
GAAAACAAGGCGATCGACGA+GGG + chr2.2:59056861-59056880 MS.gene02017:CDS 50.0%
GAAGAGGTGGTATGCGTAAC+CGG + chr2.2:59055847-59055866 MS.gene02017:CDS 50.0%
GAGATGAGATGGGTCGGAAT+TGG - chr2.2:59055959-59055978 None:intergenic 50.0%
GAGGATGTTAACGGGGAAGA+TGG - chr2.2:59056016-59056035 None:intergenic 50.0%
GATAGGGGAGAAGGATACAC+AGG + chr2.2:59057082-59057101 MS.gene02017:CDS 50.0%
GATGAGATGGGTCGGAATTG+GGG - chr2.2:59055957-59055976 None:intergenic 50.0%
GCAGGAAGCCTTTAGCCATA+AGG - chr2.2:59059364-59059383 None:intergenic 50.0%
GGTACCAAACCCTAATTGGC+CGG + chr2.2:59056839-59056858 MS.gene02017:intron 50.0%
GGTGATGCGAGATTGGACTT+CGG - chr2.2:59055995-59056014 None:intergenic 50.0%
GGTGGAGTCGAGGATGTTAA+CGG - chr2.2:59056025-59056044 None:intergenic 50.0%
GTATCCCGTGTCAAAAACGG+AGG + chr2.2:59056926-59056945 MS.gene02017:CDS 50.0%
GTATGCGTAACCGGAGCAAA+CGG + chr2.2:59055856-59055875 MS.gene02017:CDS 50.0%
GTCAAAAACGGAGGCAGAGA+AGG + chr2.2:59056935-59056954 MS.gene02017:CDS 50.0%
GTCGGAATTGGGGAAGATTG+TGG - chr2.2:59055947-59055966 None:intergenic 50.0%
GTGATGCGAGATTGGACTTC+GGG - chr2.2:59055994-59056013 None:intergenic 50.0%
GTGGAGTCGAGGATGTTAAC+GGG - chr2.2:59056024-59056043 None:intergenic 50.0%
TATGAGACTCCAACTGCTGC+TGG + chr2.2:59057164-59057183 MS.gene02017:CDS 50.0%
TCTAGAAGCAGCAAAACGCG+TGG + chr2.2:59056170-59056189 MS.gene02017:CDS 50.0%
TCTTTACCCTCACGTGCAGT+AGG - chr2.2:59057616-59057635 None:intergenic 50.0%
TGATGCGAGATTGGACTTCG+GGG - chr2.2:59055993-59056012 None:intergenic 50.0%
TGGAGTCGAGGATGTTAACG+GGG - chr2.2:59056023-59056042 None:intergenic 50.0%
TTGTGAGAAACATGGCGGTG+TGG + chr2.2:59056971-59056990 MS.gene02017:CDS 50.0%
! ACTGTAAGTTGAGGGGGAAG+TGG + chr2.2:59056904-59056923 MS.gene02017:CDS 50.0%
! AGGGTTTGGTACCTGTTGGA+GGG - chr2.2:59056832-59056851 None:intergenic 50.0%
! CAGCTCCAAATGTGCTGCTA+TGG + chr2.2:59058535-59058554 MS.gene02017:intron 50.0%
! CATAGCAGCACATTTGGAGC+TGG - chr2.2:59058537-59058556 None:intergenic 50.0%
! GCAGAGAGCCTTATGGCTAA+AGG + chr2.2:59059353-59059372 MS.gene02017:CDS 50.0%
! GGAAGATGGTGATGCGAGAT+TGG - chr2.2:59056002-59056021 None:intergenic 50.0%
! GTTCATCCGGGGACTTGTTT+GGG + chr2.2:59057005-59057024 MS.gene02017:CDS 50.0%
! TAGGGTTTGGTACCTGTTGG+AGG - chr2.2:59056833-59056852 None:intergenic 50.0%
! TGGCGTGGATTTTGTAGCGT+GGG - chr2.2:59055927-59055946 None:intergenic 50.0%
! TGTGCTGCTATGGAGTAGTG+CGG + chr2.2:59058545-59058564 MS.gene02017:intron 50.0%
! TTCATCCGGGGACTTGTTTG+GGG + chr2.2:59057006-59057025 MS.gene02017:CDS 50.0%
! TTGGGTCTTCGAGAGTGCAT+GGG - chr2.2:59056098-59056117 None:intergenic 50.0%
!! ACCGTTGATGGCGTTTGAGA+CGG - chr2.2:59056049-59056068 None:intergenic 50.0%
!! CCGAACGTTTCTAGTAGCTG+TGG + chr2.2:59057580-59057599 MS.gene02017:intron 50.0%
!! CTCTGCCTCCGTTTTTGACA+CGG - chr2.2:59056934-59056953 None:intergenic 50.0%
!! CTTCTAGAACCCGCTGTACA+AGG + chr2.2:59056135-59056154 MS.gene02017:CDS 50.0%
!! GAGGTTGATGATAGGGGAGA+AGG + chr2.2:59057073-59057092 MS.gene02017:CDS 50.0%
!! TCTGCCTCCGTTTTTGACAC+GGG - chr2.2:59056933-59056952 None:intergenic 50.0%
!!! GCCTTGTTTTCCGGCCAATT+AGG - chr2.2:59056852-59056871 None:intergenic 50.0%
!!! TCGTCGATCGCCTTGTTTTC+CGG - chr2.2:59056861-59056880 None:intergenic 50.0%
ACCGGAGCAAACGGCTTCAT+CGG + chr2.2:59055865-59055884 MS.gene02017:CDS 55.0%
ATGTGGTTGCGGTTCATCCG+GGG + chr2.2:59056994-59057013 MS.gene02017:CDS 55.0%
CCTATAGTCGTCTATCCGGG+AGG + chr2.2:59057536-59057555 MS.gene02017:intron 55.0%
CCTCCCGGATAGACGACTAT+AGG - chr2.2:59057539-59057558 None:intergenic 55.0%
GAAACATGGCGGTGTGGATG+TGG + chr2.2:59056977-59056996 MS.gene02017:CDS 55.0%
GACACCGGAACAACCGTTGA+TGG - chr2.2:59056061-59056080 None:intergenic 55.0%
GATGTGGTTGCGGTTCATCC+GGG + chr2.2:59056993-59057012 MS.gene02017:CDS 55.0%
GCCGTCTCAAACGCCATCAA+CGG + chr2.2:59056045-59056064 MS.gene02017:CDS 55.0%
GGAAAACAAGGCGATCGACG+AGG + chr2.2:59056860-59056879 MS.gene02017:CDS 55.0%
GGAAGCGACATGGAAGACAC+CGG - chr2.2:59056076-59056095 None:intergenic 55.0%
GGATGTGGTTGCGGTTCATC+CGG + chr2.2:59056992-59057011 MS.gene02017:CDS 55.0%
TCCGATGAAGCCGTTTGCTC+CGG - chr2.2:59055869-59055888 None:intergenic 55.0%
TGCTGCTATGGAGTAGTGCG+GGG + chr2.2:59058547-59058566 MS.gene02017:intron 55.0%
! CCGGGAGGCAGTCTAGAATA+TGG + chr2.2:59057551-59057570 MS.gene02017:intron 55.0%
! GGTTCATCCGGGGACTTGTT+TGG + chr2.2:59057004-59057023 MS.gene02017:CDS 55.0%
! GTGCTGCTATGGAGTAGTGC+GGG + chr2.2:59058546-59058565 MS.gene02017:intron 55.0%
! GTGGCGTGGATTTTGTAGCG+TGG - chr2.2:59055928-59055947 None:intergenic 55.0%
! GTTGGGTCTTCGAGAGTGCA+TGG - chr2.2:59056099-59056118 None:intergenic 55.0%
! TGGGTCTTCGAGAGTGCATG+GGG - chr2.2:59056097-59056116 None:intergenic 55.0%
!! CAAGTTCTGCGGTGTTGCAG+AGG + chr2.2:59057054-59057073 MS.gene02017:CDS 55.0%
!! GTTGATGGCGTTTGAGACGG+CGG - chr2.2:59056046-59056065 None:intergenic 55.0%
!! TCTGTGAGGGTGTTCTCTGC+AGG - chr2.2:59059382-59059401 None:intergenic 55.0%
AACGGCCCCAAACAAGTCCC+CGG - chr2.2:59057014-59057033 None:intergenic 60.0%
GAGTGCATGGGGAAGCGACA+TGG - chr2.2:59056086-59056105 None:intergenic 60.0%
TGCGAGATTGGACTTCGGGG+TGG - chr2.2:59055990-59056009 None:intergenic 60.0%
TGGCGGTGTGGATGTGGTTG+CGG + chr2.2:59056983-59057002 MS.gene02017:CDS 60.0%
! ACGCGTGGGTTTAAAGCGCG+TGG + chr2.2:59056185-59056204 MS.gene02017:CDS 60.0%
TTGAGACGGCGGTGGAGTCG+AGG - chr2.2:59056035-59056054 None:intergenic 65.0%
! GATGGCGTTTGAGACGGCGG+TGG - chr2.2:59056043-59056062 None:intergenic 65.0%
AGGCGATCGACGAGGGGTCG+TGG + chr2.2:59056868-59056887 MS.gene02017:CDS 70.0%
GGAGGCAGAGAAGGCGGCGT+GGG + chr2.2:59056944-59056963 MS.gene02017:CDS 70.0%
CGGAGGCAGAGAAGGCGGCG+TGG + chr2.2:59056943-59056962 MS.gene02017:CDS 75.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 59055829 59059406 59055829 ID=MS.gene02017
chr2.2 mRNA 59055829 59059406 59055829 ID=MS.gene02017.t1;Parent=MS.gene02017
chr2.2 exon 59055829 59056233 59055829 ID=MS.gene02017.t1.exon1;Parent=MS.gene02017.t1
chr2.2 CDS 59055829 59056233 59055829 ID=cds.MS.gene02017.t1;Parent=MS.gene02017.t1
chr2.2 exon 59056840 59057273 59056840 ID=MS.gene02017.t1.exon2;Parent=MS.gene02017.t1
chr2.2 CDS 59056840 59057273 59056840 ID=cds.MS.gene02017.t1;Parent=MS.gene02017.t1
chr2.2 exon 59059244 59059406 59059244 ID=MS.gene02017.t1.exon3;Parent=MS.gene02017.t1
chr2.2 CDS 59059244 59059406 59059244 ID=cds.MS.gene02017.t1;Parent=MS.gene02017.t1
Gene Sequence

>MS.gene02017

ATGACAAGCGAAAACAGAGAAGAGGTGGTATGCGTAACCGGAGCAAACGGCTTCATCGGATCATGGCTAGTTCACACCCTATTATCAAAACAAAACCCACGCTACAAAATCCACGCCACAATCTTCCCCAATTCCGACCCATCTCATCTCTTCACACTCCACCCCGAAGTCCAATCTCGCATCACCATCTTCCCCGTTAACATCCTCGACTCCACCGCCGTCTCAAACGCCATCAACGGTTGTTCCGGTGTCTTCCATGTCGCTTCCCCATGCACTCTCGAAGACCCAACCGATCCTCAAAAGGAACTTCTAGAACCCGCTGTACAAGGAACGCTTAACGTTCTAGAAGCAGCAAAACGCGTGGGTTTAAAGCGCGTGGTTCTTACATCCTCCATTTCAGCCATGGTACTGTTCTCATTCATACACTTATTTGCAGTTTATAGCACAAGTGTTTATCATGATGATAAACAAAGTTTTAAATTGTTTTCGTATATGCTATAAGTTGTGTTTATAAGCATATTGAAGAACTTATGAAAATAAGCTGAAAAAAGTTTGTCGAACACAAGCTGTTTTCACGAGTTCGTCCAAACAATCTCACAAAACTTATGTTAGTAGATAAACTCAAATCAGTCAATCCAAACAGGCATTGCTATATGTTTGCGTTCACTTCTACCGGGCCAAAATTGATTCTATAGCTGTAGAATTGATTATAACAAGTTTGGTTGCTCTCGACTATCATTGATTTTGTCTTCAGAACTGATTCTAGCTGAAGCTAAAAATTAGAGCTTTTGATCCTATCATTGATAATAACACTCAAATTTATTGTTTTTATATAAATGTATACAAACATAAATCACTTACCTTCAACTCACTTTTAGCTAGTATCAATTTTACAAAGCCAATTCACTAAAAATCAATTTTTGTCAACGGAGAACCAAACATACAATTATCTATTCTTGCATTTTTATTTATTTATTTATCAAAATACAAGTAAATTTGTCCCTCCAACAGGTACCAAACCCTAATTGGCCGGAAAACAAGGCGATCGACGAGGGGTCGTGGACTGATGTTGAGTACTGTAAGTTGAGGGGGAAGTGGTATCCCGTGTCAAAAACGGAGGCAGAGAAGGCGGCGTGGGAGTTTTGTGAGAAACATGGCGGTGTGGATGTGGTTGCGGTTCATCCGGGGACTTGTTTGGGGCCGTTGCTTCAGAATCAGATGAATGCAAGTTCTGCGGTGTTGCAGAGGTTGATGATAGGGGAGAAGGATACACAGGAGTGTTATTGGTTGGGTGCTGTTCATGTTAAAGATGTTGCTAGAGCTCATGTTTTGGTTTATGAGACTCCAACTGCTGCTGGTAGATATCTTTGTGTAAATGGTATCTATCAGTTTTCTAGTTTTGCCAAAATTGTCTCTGAATTGTACCCTGATTTCCCTATTCACAGGTTAGTTTGTTGTTTCATTTCATTCCCATGCCATGTTATGTTCTCTTCTTGTTTAAAACCATTCATCATAGAAATAACATTTGTTTCCTTGGTTTAAAGTTAGTTTGATTTTTGAAGAGTAGTATTTGATTAGTTTTGATTAAAATCACTTTTAGATTAGGTTTGATCTTTGATGACACTAAATATGACACAATTTTGCTAAAAGATTTAAAAAGTAGTTAAGTCAAACAAATACGGTGAAAATAGAACATCCTAGTTCTGTCCTATAGTCGTCTATCCGGGAGGCAGTCTAGAATATGGAAAAAACCGAACGTTTCTAGTAGCTGTGGGCATAAATAACCTACTGCACGTGAGGGTAAAGACCCGAACTAGCAAAGAAGATAGGGACCATTTTTTATTATAATTCTATATTGTGTTGTGTTTATGTGCAGAATGCAGATGGCTTTTAAGCATATAAGCTTGTATTTAAACTCTATTATTTATTGAAACTCTTCGGACAACCATCTTTGTTGTATGTTGTGTTTATGGGAGAACATTGTATTGCAGCCATCTTTGTAATAGTGTCAACCAACCTTATCTAAAGAAGAACTTAACAGAGATATTTGGGTGAATTGAGAACAAATACAGAGTTAAGATTTACATAAAACTCTACATGATTTTCCTTTCCTTTTTCTATTGGACTGAAGCTCTTGTATGCTGCGTTAATGAGTTTAAACTTTAAAGCATTGGGTGATGATTGGACATCCTTTAGCTATTACAAGCCTGTGGTGATTGAGAAGTAATATTGAAAGCACTAACGGGATAAAAAATCAATAGACAATTGGCAAATTGTTGAACTAAAAGATAATCTAAGTAAACTATGCGACTAGACATTTTGTCTTGATGAAGTGGCTGTAATCTTGGACTAGAACTTGTTATTTTATCTACCGCTACTTTGAATGATATATAAAGTCTTTTGTTTTTGAAGCGAATTAAGGAAGGAAGTGATTCACAAACTTCTCAAGTTCCAATCATAGATCACAATAGAAATCAATCTTTGGCTGATTTCAATAAGTTATTACATATGTGATGTAAAAGGTTAGAATTGTTAATAAGTTATTGAGAAAAGCCGGAAAAATCTAATGCAAAGGTAACACATTCAGACATTCTTGCTTATACTCAAATGCCAGTTTTAAAAGAGAAAAGAGAATCATTGTTATGAAGAATGTACCAAACAACATCAGTTTCTTAAACCTAGGTTTGGAACCAAACTCATATTTGCCAGCTCCAAATGTGCTGCTATGGAGTAGTGCGGGGCCAAGTAAGAGCAGAGATTTATATCATTTTCTCAAGAATCTATCTATGCAGTGTGGTTACTATAACCCATTGAGTGAACATATACTGGTTGCTATTACTATGTGCTGTATCCTAGATGTCTCTTGAGCTTTTCAGCTTTTTCTTTTGGTCTAAATGACACCATTCAAATCTAGATTTATCATCATCACGCATGGGGTATATTTTGAAGTATTTTTTGTCTATAGTTATTGAAAACAGTTCAACATATTTGGGTTCAAAAGCATGAGTTGGATCAAGAAAAAGGGTCCCCATTGTATTGTTTCCCAATGGCTGAAATTATTACAGATACCTTGTTAGCACTATTCTTCTGTAAACTTTTGTGTTCAAAATTATTTCCCCCCTATCACTTCTTTATTGAACATATGGGCCATGGCAAATGATTAATTTAGAGAAAAGTGATGCTATGGCATGCTTTATTCTAAATCTTAAATTATTTTATGCAATTAAGATCGGTTAGCTACCTATTTCATGTAGGAAAACAGGACAACCTGGATACCAAAAATTAATATTAATCCGGTTAAATTTTTTAATTAAATAAATTGCAATTCATAGTTAGATTTTTGTTTTTGTACTTCTGATCTGCAAATTTCTCTGATATACTATGCTAGTTTTCTCTGAACATGAACTGCATGCAGTTTCCCCAATGAAACTCAACCTGGTTTGACACCATGTAAAGAGGCAGCAAGGAGGCTAATAGACTTGGGCTTAGTCTTCACACCCATTCAAGATGCTATCAGAGAAGCAGCAGAGAGCCTTATGGCTAAAGGCTTCCTGCAGAGAACACCCTCACAGAATTAG
Protein sequence

>MS.gene02017.t1

MTSENREEVVCVTGANGFIGSWLVHTLLSKQNPRYKIHATIFPNSDPSHLFTLHPEVQSRITIFPVNILDSTAVSNAINGCSGVFHVASPCTLEDPTDPQKELLEPAVQGTLNVLEAAKRVGLKRVVLTSSISAMVPNPNWPENKAIDEGSWTDVEYCKLRGKWYPVSKTEAEKAAWEFCEKHGGVDVVAVHPGTCLGPLLQNQMNASSAVLQRLMIGEKDTQECYWLGAVHVKDVARAHVLVYETPTAAGRYLCVNGIYQFSSFAKIVSELYPDFPIHSFPNETQPGLTPCKEAARRLIDLGLVFTPIQDAIREAAESLMAKGFLQRTPSQN