Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41678.t1 | XP_003602786.1 | 94 | 382 | 23 | 0 | 113 | 494 | 111 | 492 | 1.80E-102 | 383.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41678.t1 | Q7TNV0 | 34.8 | 112 | 68 | 3 | 130 | 241 | 84 | 190 | 2.8e-08 | 61.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41678.t1 | G7J3D6 | 94.0 | 382 | 23 | 0 | 113 | 494 | 111 | 492 | 1.3e-102 | 383.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene41678 | 0.900981 | 4.25E-78 | -1.69E-46 |
| MS.gene049159 | MS.gene41678 | 0.811636 | 6.34E-51 | -1.69E-46 |
| MS.gene04918 | MS.gene41678 | 0.831199 | 1.91E-55 | -1.69E-46 |
| MS.gene04920 | MS.gene41678 | 0.806058 | 9.89E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene41678 | 0.822478 | 2.32E-53 | -1.69E-46 |
| MS.gene049283 | MS.gene41678 | 0.834247 | 3.35E-56 | -1.69E-46 |
| MS.gene049300 | MS.gene41678 | 0.80025 | 1.57E-48 | -1.69E-46 |
| MS.gene049343 | MS.gene41678 | 0.802894 | 4.52E-49 | -1.69E-46 |
| MS.gene049350 | MS.gene41678 | 0.835482 | 1.64E-56 | -1.69E-46 |
| MS.gene049368 | MS.gene41678 | 0.86318 | 2.99E-64 | -1.69E-46 |
| MS.gene049499 | MS.gene41678 | 0.818564 | 1.84E-52 | -1.69E-46 |
| MS.gene049711 | MS.gene41678 | 0.801848 | 7.42E-49 | -1.69E-46 |
| MS.gene049786 | MS.gene41678 | 0.811702 | 6.13E-51 | -1.69E-46 |
| MS.gene049807 | MS.gene41678 | 0.836078 | 1.16E-56 | -1.69E-46 |
| MS.gene049850 | MS.gene41678 | 0.811867 | 5.65E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene41678 | 0.847252 | 1.30E-59 | -1.69E-46 |
| MS.gene050213 | MS.gene41678 | 0.821229 | 4.51E-53 | -1.69E-46 |
| MS.gene050414 | MS.gene41678 | 0.808986 | 2.37E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene41678 | 0.80157 | 8.46E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene41678 | 0.858804 | 6.41E-63 | -1.69E-46 |
| MS.gene050556 | MS.gene41678 | 0.807654 | 4.55E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene41678 | 0.826781 | 2.25E-54 | -1.69E-46 |
| MS.gene050654 | MS.gene41678 | 0.845393 | 4.18E-59 | -1.69E-46 |
| MS.gene050689 | MS.gene41678 | 0.858096 | 1.04E-62 | -1.69E-46 |
| MS.gene050759 | MS.gene41678 | 0.808156 | 3.56E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene41678 | 0.842118 | 3.14E-58 | -1.69E-46 |
| MS.gene050901 | MS.gene41678 | 0.830578 | 2.71E-55 | -1.69E-46 |
| MS.gene050941 | MS.gene41678 | 0.806688 | 7.28E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene41678 | 0.860919 | 1.48E-63 | -1.69E-46 |
| MS.gene051029 | MS.gene41678 | 0.820821 | 5.60E-53 | -1.69E-46 |
| MS.gene051102 | MS.gene41678 | 0.809877 | 1.52E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene41678 | 0.861834 | 7.77E-64 | -1.69E-46 |
| MS.gene051247 | MS.gene41678 | 0.81634 | 5.82E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene41678 | 0.867388 | 1.42E-65 | -1.69E-46 |
| MS.gene051381 | MS.gene41678 | 0.819247 | 1.28E-52 | -1.69E-46 |
| MS.gene051450 | MS.gene41678 | 0.803026 | 4.24E-49 | -1.69E-46 |
| MS.gene051490 | MS.gene41678 | 0.812735 | 3.65E-51 | -1.69E-46 |
| MS.gene051676 | MS.gene41678 | 0.840326 | 9.30E-58 | -1.69E-46 |
| MS.gene051700 | MS.gene41678 | 0.803609 | 3.21E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene41678 | 0.849694 | 2.74E-60 | -1.69E-46 |
| MS.gene05188 | MS.gene41678 | 0.819278 | 1.26E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene41678 | 0.872183 | 3.87E-67 | -1.69E-46 |
| MS.gene052016 | MS.gene41678 | 0.839442 | 1.58E-57 | -1.69E-46 |
| MS.gene052072 | MS.gene41678 | 0.815171 | 1.06E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene41678 | 0.877838 | 4.56E-69 | -1.69E-46 |
| MS.gene052335 | MS.gene41678 | 0.827163 | 1.82E-54 | -1.69E-46 |
| MS.gene052342 | MS.gene41678 | 0.812238 | 4.69E-51 | -1.69E-46 |
| MS.gene052434 | MS.gene41678 | 0.825452 | 4.65E-54 | -1.69E-46 |
| MS.gene052463 | MS.gene41678 | 0.870561 | 1.33E-66 | -1.69E-46 |
| MS.gene052516 | MS.gene41678 | 0.834504 | 2.89E-56 | -1.69E-46 |
| MS.gene052518 | MS.gene41678 | 0.820264 | 7.52E-53 | -1.69E-46 |
| MS.gene052533 | MS.gene41678 | 0.821778 | 3.37E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene41678 | 0.881955 | 1.56E-70 | -1.69E-46 |
| MS.gene052773 | MS.gene41678 | 0.800887 | 1.17E-48 | -1.69E-46 |
| MS.gene052775 | MS.gene41678 | 0.829762 | 4.29E-55 | -1.69E-46 |
| MS.gene052776 | MS.gene41678 | 0.840444 | 8.66E-58 | -1.69E-46 |
| MS.gene052855 | MS.gene41678 | 0.805603 | 1.23E-49 | -1.69E-46 |
| MS.gene052888 | MS.gene41678 | 0.800658 | 1.30E-48 | -1.69E-46 |
| MS.gene052889 | MS.gene41678 | 0.810495 | 1.12E-50 | -1.69E-46 |
| MS.gene052932 | MS.gene41678 | 0.832691 | 8.18E-56 | -1.69E-46 |
| MS.gene053058 | MS.gene41678 | 0.847119 | 1.42E-59 | -1.69E-46 |
| MS.gene053079 | MS.gene41678 | 0.867564 | 1.25E-65 | -1.69E-46 |
| MS.gene053122 | MS.gene41678 | 0.831549 | 1.57E-55 | -1.69E-46 |
| MS.gene053143 | MS.gene41678 | 0.860286 | 2.30E-63 | -1.69E-46 |
| MS.gene053144 | MS.gene41678 | 0.808774 | 2.63E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene41678 | 0.843917 | 1.04E-58 | -1.69E-46 |
| MS.gene053296 | MS.gene41678 | 0.801992 | 6.93E-49 | -1.69E-46 |
| MS.gene05350 | MS.gene41678 | 0.801241 | 9.88E-49 | -1.69E-46 |
| MS.gene053564 | MS.gene41678 | 0.802798 | 4.73E-49 | -1.69E-46 |
| MS.gene053581 | MS.gene41678 | 0.806445 | 8.20E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene41678 | 0.824219 | 9.09E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene41678 | 0.820371 | 7.11E-53 | -1.69E-46 |
| MS.gene054004 | MS.gene41678 | 0.820278 | 7.46E-53 | -1.69E-46 |
| MS.gene054142 | MS.gene41678 | 0.815358 | 9.63E-52 | -1.69E-46 |
| MS.gene054178 | MS.gene41678 | 0.846617 | 1.94E-59 | -1.69E-46 |
| MS.gene05458 | MS.gene41678 | 0.836173 | 1.09E-56 | -1.69E-46 |
| MS.gene054651 | MS.gene41678 | 0.827895 | 1.22E-54 | -1.69E-46 |
| MS.gene054709 | MS.gene41678 | 0.808724 | 2.69E-50 | -1.69E-46 |
| MS.gene054824 | MS.gene41678 | 0.821998 | 3.00E-53 | -1.69E-46 |
| MS.gene054892 | MS.gene41678 | 0.817166 | 3.80E-52 | -1.69E-46 |
| MS.gene054893 | MS.gene41678 | 0.816253 | 6.08E-52 | -1.69E-46 |
| MS.gene054943 | MS.gene41678 | 0.812245 | 4.67E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene41678 | 0.824649 | 7.20E-54 | -1.69E-46 |
| MS.gene055310 | MS.gene41678 | 0.816316 | 5.89E-52 | -1.69E-46 |
| MS.gene055311 | MS.gene41678 | 0.835541 | 1.58E-56 | -1.69E-46 |
| MS.gene055313 | MS.gene41678 | 0.853204 | 2.79E-61 | -1.69E-46 |
| MS.gene055314 | MS.gene41678 | 0.813181 | 2.91E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene41678 | 0.816599 | 5.09E-52 | -1.69E-46 |
| MS.gene055465 | MS.gene41678 | 0.818142 | 2.29E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene41678 | 0.815469 | 9.10E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene41678 | 0.816807 | 4.57E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene41678 | 0.831764 | 1.39E-55 | -1.69E-46 |
| MS.gene055513 | MS.gene41678 | 0.98454 | 7.38E-161 | -1.69E-46 |
| MS.gene05552 | MS.gene41678 | 0.803868 | 2.84E-49 | -1.69E-46 |
| MS.gene055580 | MS.gene41678 | -0.814996 | 1.16E-51 | -1.69E-46 |
| MS.gene055841 | MS.gene41678 | 0.805852 | 1.09E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene41678 | 0.853383 | 2.48E-61 | -1.69E-46 |
| MS.gene056043 | MS.gene41678 | -0.814005 | 1.92E-51 | -1.69E-46 |
| MS.gene056045 | MS.gene41678 | 0.856042 | 4.20E-62 | -1.69E-46 |
| MS.gene056181 | MS.gene41678 | 0.877613 | 5.46E-69 | -1.69E-46 |
| MS.gene056215 | MS.gene41678 | 0.828911 | 6.91E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene41678 | 0.873764 | 1.14E-67 | -1.69E-46 |
| MS.gene056390 | MS.gene41678 | 0.838053 | 3.61E-57 | -1.69E-46 |
| MS.gene056403 | MS.gene41678 | 0.814643 | 1.39E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene41678 | 0.835813 | 1.35E-56 | -1.69E-46 |
| MS.gene056509 | MS.gene41678 | 0.802094 | 6.60E-49 | -1.69E-46 |
| MS.gene056578 | MS.gene41678 | 0.817849 | 2.66E-52 | -1.69E-46 |
| MS.gene056595 | MS.gene41678 | 0.806666 | 7.36E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene41678 | 0.87916 | 1.56E-69 | -1.69E-46 |
| MS.gene056787 | MS.gene41678 | 0.834698 | 2.58E-56 | -1.69E-46 |
| MS.gene056831 | MS.gene41678 | 0.853694 | 2.02E-61 | -1.69E-46 |
| MS.gene05686 | MS.gene41678 | 0.816773 | 4.65E-52 | -1.69E-46 |
| MS.gene05689 | MS.gene41678 | 0.809767 | 1.61E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene41678 | 0.83575 | 1.40E-56 | -1.69E-46 |
| MS.gene057034 | MS.gene41678 | 0.898774 | 3.82E-77 | -1.69E-46 |
| MS.gene057102 | MS.gene41678 | 0.860756 | 1.65E-63 | -1.69E-46 |
| MS.gene057155 | MS.gene41678 | 0.80175 | 7.77E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene41678 | 0.818527 | 1.87E-52 | -1.69E-46 |
| MS.gene057294 | MS.gene41678 | 0.837654 | 4.57E-57 | -1.69E-46 |
| MS.gene057360 | MS.gene41678 | 0.813156 | 2.95E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene41678 | 0.823674 | 1.22E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene41678 | 0.814271 | 1.68E-51 | -1.69E-46 |
| MS.gene058095 | MS.gene41678 | 0.816563 | 5.19E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene41678 | 0.801346 | 9.40E-49 | -1.69E-46 |
| MS.gene058289 | MS.gene41678 | 0.806704 | 7.23E-50 | -1.69E-46 |
| MS.gene058292 | MS.gene41678 | 0.847336 | 1.23E-59 | -1.69E-46 |
| MS.gene058639 | MS.gene41678 | 0.806963 | 6.37E-50 | -1.69E-46 |
| MS.gene058649 | MS.gene41678 | 0.830082 | 3.59E-55 | -1.69E-46 |
| MS.gene058668 | MS.gene41678 | 0.837908 | 3.94E-57 | -1.69E-46 |
| MS.gene058681 | MS.gene41678 | 0.838134 | 3.44E-57 | -1.69E-46 |
| MS.gene058758 | MS.gene41678 | 0.81237 | 4.39E-51 | -1.69E-46 |
| MS.gene058781 | MS.gene41678 | 0.815481 | 9.04E-52 | -1.69E-46 |
| MS.gene058976 | MS.gene41678 | 0.801099 | 1.06E-48 | -1.69E-46 |
| MS.gene059146 | MS.gene41678 | 0.850089 | 2.13E-60 | -1.69E-46 |
| MS.gene059170 | MS.gene41678 | 0.825553 | 4.40E-54 | -1.69E-46 |
| MS.gene059227 | MS.gene41678 | 0.810007 | 1.43E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene41678 | 0.801716 | 7.90E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene41678 | 0.809309 | 2.02E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene41678 | 0.845749 | 3.34E-59 | -1.69E-46 |
| MS.gene059725 | MS.gene41678 | 0.810358 | 1.20E-50 | -1.69E-46 |
| MS.gene059778 | MS.gene41678 | 0.875314 | 3.40E-68 | -1.69E-46 |
| MS.gene05978 | MS.gene41678 | 0.805551 | 1.26E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene41678 | 0.806434 | 8.24E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene41678 | -0.843676 | 1.21E-58 | -1.69E-46 |
| MS.gene059901 | MS.gene41678 | -0.827568 | 1.46E-54 | -1.69E-46 |
| MS.gene059965 | MS.gene41678 | 0.849853 | 2.48E-60 | -1.69E-46 |
| MS.gene060296 | MS.gene41678 | 0.818777 | 1.64E-52 | -1.69E-46 |
| MS.gene060343 | MS.gene41678 | -0.801539 | 8.59E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene41678 | 0.808394 | 3.17E-50 | -1.69E-46 |
| MS.gene060435 | MS.gene41678 | 0.826059 | 3.34E-54 | -1.69E-46 |
| MS.gene060637 | MS.gene41678 | 0.814535 | 1.47E-51 | -1.69E-46 |
| MS.gene060763 | MS.gene41678 | 0.813021 | 3.16E-51 | -1.69E-46 |
| MS.gene060777 | MS.gene41678 | 0.811318 | 7.43E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene41678 | 0.820604 | 6.28E-53 | -1.69E-46 |
| MS.gene060933 | MS.gene41678 | 0.844149 | 9.04E-59 | -1.69E-46 |
| MS.gene060935 | MS.gene41678 | 0.844928 | 5.58E-59 | -1.69E-46 |
| MS.gene060937 | MS.gene41678 | 0.856261 | 3.63E-62 | -1.69E-46 |
| MS.gene061006 | MS.gene41678 | 0.831504 | 1.61E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene41678 | 0.887158 | 1.82E-72 | -1.69E-46 |
| MS.gene061160 | MS.gene41678 | 0.812239 | 4.69E-51 | -1.69E-46 |
| MS.gene061188 | MS.gene41678 | 0.823024 | 1.73E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene41678 | MS.gene30557 | PPI |
| MS.gene41678 | MS.gene41129 | PPI |
| MS.gene41678 | MS.gene021158 | PPI |
| MS.gene41678 | MS.gene003999 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41678.t1 | MTR_3g098990 | 96.162 | 495 | 15 | 3 | 1 | 494 | 1 | 492 | 0.0 | 927 |
| MS.gene41678.t1 | MTR_5g095720 | 40.749 | 427 | 211 | 13 | 93 | 494 | 444 | 853 | 2.70e-69 | 238 |
| MS.gene41678.t1 | MTR_3g058970 | 40.238 | 420 | 215 | 9 | 93 | 490 | 371 | 776 | 8.40e-67 | 229 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41678.t1 | AT3G48710 | 48.730 | 433 | 191 | 12 | 69 | 494 | 30 | 438 | 2.35e-110 | 335 |
| MS.gene41678.t1 | AT5G63550 | 49.038 | 416 | 169 | 11 | 94 | 494 | 94 | 481 | 8.06e-96 | 300 |
| MS.gene41678.t1 | AT5G63550 | 48.551 | 414 | 173 | 10 | 94 | 494 | 94 | 480 | 1.41e-94 | 296 |
| MS.gene41678.t1 | AT5G55660 | 52.632 | 171 | 73 | 4 | 93 | 261 | 323 | 487 | 8.69e-46 | 171 |
| MS.gene41678.t1 | AT4G26630 | 43.509 | 285 | 128 | 5 | 12 | 268 | 207 | 486 | 4.82e-42 | 160 |
| MS.gene41678.t1 | AT4G26630 | 43.509 | 285 | 128 | 5 | 12 | 268 | 207 | 486 | 4.82e-42 | 160 |
Find 96 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAGCTGTTGGAATTTC+TGG | 0.096765 | 3.3:-81546926 | MS.gene41678:CDS |
| TTCACACTACTCTTGTTTAT+TGG | 0.122133 | 3.3:+81547055 | None:intergenic |
| TTCTGGTTTGGGTTCATCTT+TGG | 0.192982 | 3.3:+81549130 | None:intergenic |
| TTCAACTTCTTCTTCTGGTT+TGG | 0.223760 | 3.3:+81549118 | None:intergenic |
| TTCAATTATCAGTCCTTTAC+TGG | 0.245498 | 3.3:+81548812 | None:intergenic |
| TCTTCCCAAACAGTATATTA+TGG | 0.253248 | 3.3:+81547479 | None:intergenic |
| ATGTTGACAGGTAAACATTT+TGG | 0.262420 | 3.3:-81544610 | MS.gene41678:intron |
| TCAACTTCTTCTTCTGGTTT+GGG | 0.267047 | 3.3:+81549119 | None:intergenic |
| CTGCAACATCTTCATCTTCT+TGG | 0.269136 | 3.3:+81545555 | None:intergenic |
| GAACCTTCACCTTCGAAGTT+TGG | 0.300483 | 3.3:-81548846 | MS.gene41678:CDS |
| GTTACTTCAACTTCTTCTTC+TGG | 0.304574 | 3.3:+81549113 | None:intergenic |
| ATGCTCCATAATATACTGTT+TGG | 0.317065 | 3.3:-81547484 | MS.gene41678:CDS |
| AATAAAGACAATACCTTTGC+AGG | 0.331373 | 3.3:+81546520 | None:intergenic |
| ACCGTCTTCCTTTCCCTAGT+TGG | 0.341819 | 3.3:+81548882 | None:intergenic |
| AACTGCAAAGGCTGCGGTTA+AGG | 0.346132 | 3.3:-81545219 | MS.gene41678:CDS |
| GAAGTACTCTTGTGAGCTTT+TGG | 0.351465 | 3.3:+81545476 | None:intergenic |
| GGAAGATGCTGGTGAGAAGA+AGG | 0.360035 | 3.3:-81548964 | MS.gene41678:CDS |
| TAAGGAAGTAGATTTCAATA+AGG | 0.361423 | 3.3:-81544828 | MS.gene41678:intron |
| TTCATCATCATCATCTTTCT+CGG | 0.365632 | 3.3:+81549028 | None:intergenic |
| TGCAACATCTTCATCTTCTT+GGG | 0.375038 | 3.3:+81545556 | None:intergenic |
| CTATCACTCGTCGGAGTAAC+CGG | 0.377163 | 3.3:+81548906 | None:intergenic |
| TTTGGTATCGTCTAGGGTTT+CGG | 0.386462 | 3.3:+81549175 | None:intergenic |
| AACAATCTAAAGAGGAATAT+AGG | 0.417865 | 3.3:-81547357 | MS.gene41678:CDS |
| CCCACACATAACCAGAAAAC+TGG | 0.422298 | 3.3:+81547334 | None:intergenic |
| ACCTTTGCAGGTGTTTCTCC+AGG | 0.429504 | 3.3:+81546532 | None:intergenic |
| CGGTTACTCCGACGAGTGAT+AGG | 0.432059 | 3.3:-81548905 | MS.gene41678:CDS |
| AAAGGAAAAGCAAGATACTA+AGG | 0.439714 | 3.3:-81545258 | MS.gene41678:CDS |
| TGCTCCATAATATACTGTTT+GGG | 0.440179 | 3.3:-81547483 | MS.gene41678:CDS |
| TGTGGATTTAGCTTCAGCTT+TGG | 0.444959 | 3.3:+81545424 | None:intergenic |
| AGCATATGCAGGTTGTCGTC+AGG | 0.453182 | 3.3:+81547502 | None:intergenic |
| AGTTGTAGTTGAGATTCTTA+AGG | 0.454398 | 3.3:-81544846 | MS.gene41678:CDS |
| CAGCTCAAGGATATTCCTAA+TGG | 0.456524 | 3.3:-81548688 | MS.gene41678:intron |
| CGACGAGTGATAGGCCAACT+AGG | 0.464921 | 3.3:-81548896 | MS.gene41678:CDS |
| CTGCCTACTCGGCTCTACCT+TGG | 0.468843 | 3.3:+81544880 | None:intergenic |
| TAAAGGACTGATAATTGAAA+AGG | 0.476582 | 3.3:-81548808 | MS.gene41678:intron |
| GGAAGGTCTTCTTCCAGTAA+AGG | 0.477738 | 3.3:-81548825 | MS.gene41678:CDS |
| GATGTTGCAGTGGCAAATAA+TGG | 0.486223 | 3.3:-81545542 | MS.gene41678:CDS |
| AAAACAGAGAACAAGGGTAA+AGG | 0.493647 | 3.3:-81547137 | MS.gene41678:CDS |
| GGTTGCAGGTTGATCTGACT+TGG | 0.495113 | 3.3:+81545298 | None:intergenic |
| CTTCACCTTCGAAGTTTGGA+AGG | 0.500580 | 3.3:-81548842 | MS.gene41678:CDS |
| GCAACCTCTAGCAAATCTCC+TGG | 0.500613 | 3.3:-81546550 | MS.gene41678:CDS |
| GAAGATGCTGGTGAGAAGAA+GGG | 0.505112 | 3.3:-81548963 | MS.gene41678:CDS |
| CAAGGTAGAGCCGAGTAGGC+AGG | 0.505315 | 3.3:-81544879 | MS.gene41678:CDS |
| GGAACTGTCTGCAAAGCTGT+TGG | 0.508885 | 3.3:-81546935 | MS.gene41678:CDS |
| GCGTGCATGTCCTGCCTACT+CGG | 0.511396 | 3.3:+81544869 | None:intergenic |
| TGTGATATCCTCCGCCAACT+TGG | 0.519770 | 3.3:-81544706 | MS.gene41678:intron |
| GATGAGGAGGAGGAAGATGC+TGG | 0.524251 | 3.3:-81548975 | MS.gene41678:CDS |
| GTCTAGGGTTTCGGTAGCCA+TGG | 0.528885 | 3.3:+81549184 | None:intergenic |
| AAAGATGATGATGATGAAGA+TGG | 0.532403 | 3.3:-81549023 | MS.gene41678:CDS |
| CTTCCAAACTTCGAAGGTGA+AGG | 0.533904 | 3.3:+81548843 | None:intergenic |
| AAACAAGAGTAGTGTGAAGA+AGG | 0.535530 | 3.3:-81547050 | MS.gene41678:intron |
| GTATATTATGGAGCATATGC+AGG | 0.537093 | 3.3:+81547491 | None:intergenic |
| AAGGCTGCGGTTAAGGATCA+AGG | 0.539742 | 3.3:-81545212 | MS.gene41678:intron |
| GGTGGGTAAATCAGAGGGAG+AGG | 0.543397 | 3.3:-81545507 | MS.gene41678:CDS |
| TCATCCTCTTCAACATCAGA+AGG | 0.546993 | 3.3:+81545611 | None:intergenic |
| GCATAGAAAAGCAGAGGTGA+AGG | 0.548691 | 3.3:-81544575 | MS.gene41678:CDS |
| GTCAGGTTAACAATCTAAAG+AGG | 0.549753 | 3.3:-81547365 | MS.gene41678:intron |
| AAGCAAAACTGCAAAGGCTG+CGG | 0.555092 | 3.3:-81545225 | MS.gene41678:CDS |
| GGCTGCAAGCAAAACTGCAA+AGG | 0.556180 | 3.3:-81545231 | MS.gene41678:CDS |
| AGACCAAGGTAGAGCCGAGT+AGG | 0.561195 | 3.3:-81544883 | MS.gene41678:CDS |
| TCCTGGAGAAACACCTGCAA+AGG | 0.568341 | 3.3:-81546533 | MS.gene41678:intron |
| AGAGGTCTTCTTAACAGATG+TGG | 0.571409 | 3.3:+81545406 | None:intergenic |
| AGATCGTACCAAGTTGGCGG+AGG | 0.575455 | 3.3:+81544698 | None:intergenic |
| AATGGAAGTGATAACGAGGT+GGG | 0.578180 | 3.3:-81545524 | MS.gene41678:CDS |
| GTCGTCAGAGAAGAAGAGTC+CGG | 0.583062 | 3.3:-81548925 | MS.gene41678:CDS |
| AAAGCCTTCTGATGTTGAAG+AGG | 0.584119 | 3.3:-81545615 | MS.gene41678:CDS |
| TTGCATCAGAAAGTTCAGCT+TGG | 0.584847 | 3.3:+81545588 | None:intergenic |
| GACGAGTGATAGGCCAACTA+GGG | 0.592833 | 3.3:-81548895 | MS.gene41678:CDS |
| AAAGCAAGATACTAAGGGAA+AGG | 0.596671 | 3.3:-81545252 | MS.gene41678:CDS |
| CTAGTTGGCCTATCACTCGT+CGG | 0.600264 | 3.3:+81548897 | None:intergenic |
| AACGAGGTGGGTAAATCAGA+GGG | 0.602782 | 3.3:-81545512 | MS.gene41678:CDS |
| GGGACGTGGTACTCAGCTCA+AGG | 0.605098 | 3.3:-81548701 | MS.gene41678:CDS |
| AAAAGATCGTACCAAGTTGG+CGG | 0.607538 | 3.3:+81544695 | None:intergenic |
| GCCAACTAGGGAAAGGAAGA+CGG | 0.609544 | 3.3:-81548883 | MS.gene41678:CDS |
| GTGATAGGCCAACTAGGGAA+AGG | 0.614124 | 3.3:-81548890 | MS.gene41678:CDS |
| AAGGAAAAGCAAGATACTAA+GGG | 0.616103 | 3.3:-81545257 | MS.gene41678:CDS |
| TGATGCTGATGATGAGGAGG+AGG | 0.619807 | 3.3:-81548985 | MS.gene41678:CDS |
| GAACATCAGTAGTAGCATGT+GGG | 0.620057 | 3.3:+81546899 | None:intergenic |
| TTATGTGTGGGCTGAAAATG+AGG | 0.621414 | 3.3:-81547322 | MS.gene41678:intron |
| TTTAATGCATAGAAAAGCAG+AGG | 0.621749 | 3.3:-81544581 | MS.gene41678:CDS |
| GAAGACCTTCCAAACTTCGA+AGG | 0.621788 | 3.3:+81548837 | None:intergenic |
| AGAACATCAGTAGTAGCATG+TGG | 0.622938 | 3.3:+81546898 | None:intergenic |
| TTCTCCAGGAGATTTGCTAG+AGG | 0.624862 | 3.3:+81546546 | None:intergenic |
| AGAGAACAAGGGTAAAGGAG+AGG | 0.625869 | 3.3:-81547132 | MS.gene41678:CDS |
| TAATGGAAGTGATAACGAGG+TGG | 0.625907 | 3.3:-81545525 | MS.gene41678:CDS |
| TAACGAGGTGGGTAAATCAG+AGG | 0.626281 | 3.3:-81545513 | MS.gene41678:CDS |
| AACATCAGTAGTAGCATGTG+GGG | 0.636718 | 3.3:+81546900 | None:intergenic |
| TAAAAGTAGTAAGAAGACCA+AGG | 0.637365 | 3.3:-81544897 | MS.gene41678:CDS |
| AGAAGATGAAGATGTTGCAG+TGG | 0.648957 | 3.3:-81545552 | MS.gene41678:CDS |
| TGCTGATGCTGATGATGAGG+AGG | 0.650159 | 3.3:-81548988 | MS.gene41678:CDS |
| CGATGCTGATGCTGATGATG+AGG | 0.652325 | 3.3:-81548991 | MS.gene41678:CDS |
| AAGAGAAGCAGAATCCTGCT+CGG | 0.653130 | 3.3:+81545322 | None:intergenic |
| AACTAGGGAAAGGAAGACGG+TGG | 0.691004 | 3.3:-81548880 | MS.gene41678:CDS |
| ACTGTTTGGGAAGAAAACAA+AGG | 0.691158 | 3.3:-81547470 | MS.gene41678:intron |
| TGAAGTAACTGAACAAGACG+CGG | 0.710408 | 3.3:-81549099 | MS.gene41678:CDS |
| AAATAATGGAAGTGATAACG+AGG | 0.765529 | 3.3:-81545528 | MS.gene41678:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATTATACATTGTTTA+CGG | + | chr3.3:81546662-81546681 | None:intergenic | 10.0% |
| !! | GATTTATTTCATTTATTTAA+AGG | - | chr3.3:81546043-81546062 | MS.gene41678:intron | 10.0% |
| !!! | GTTTGTTATTTAATATAAAT+GGG | - | chr3.3:81546610-81546629 | MS.gene41678:intron | 10.0% |
| !!! | TTTTTTTCTCAATTTTTTAT+CGG | - | chr3.3:81545070-81545089 | MS.gene41678:intron | 10.0% |
| !! | AAATGCAAAAAAAAAGAAAA+AGG | + | chr3.3:81544929-81544948 | None:intergenic | 15.0% |
| !! | AATAAAAAAGATTATTTGTC+TGG | + | chr3.3:81546756-81546775 | None:intergenic | 15.0% |
| !! | TTCAGAATAACAAAAAATTA+GGG | + | chr3.3:81548428-81548447 | None:intergenic | 15.0% |
| !!! | AGACAAATAATCTTTTTTAT+TGG | - | chr3.3:81546755-81546774 | MS.gene41678:intron | 15.0% |
| !!! | GGTTTGTTATTTAATATAAA+TGG | - | chr3.3:81546609-81546628 | MS.gene41678:intron | 15.0% |
| !!! | GTTTTTGATTAATTTGATTT+TGG | - | chr3.3:81544731-81544750 | MS.gene41678:intron | 15.0% |
| !!! | TGTCTTTATTTTATTCATTT+TGG | - | chr3.3:81546959-81546978 | MS.gene41678:intron | 15.0% |
| !!! | TTTTTTGGTATTGATTTTTT+TGG | + | chr3.3:81548116-81548135 | None:intergenic | 15.0% |
| !! | AATGAAATAAATCTTTGCAA+AGG | + | chr3.3:81546036-81546055 | None:intergenic | 20.0% |
| !! | AATTAATAATATGTCTGATG+AGG | - | chr3.3:81548930-81548949 | MS.gene41678:CDS | 20.0% |
| !! | ACAATTAAAATCATCCATAT+AGG | + | chr3.3:81544952-81544971 | None:intergenic | 20.0% |
| !! | ATGAAAATAAAATTTAGCTG+TGG | + | chr3.3:81549098-81549117 | None:intergenic | 20.0% |
| !! | GAGAAAACTTAATTAATGTT+TGG | - | chr3.3:81547402-81547421 | MS.gene41678:intron | 20.0% |
| !! | GTTCAGAATAACAAAAAATT+AGG | + | chr3.3:81548429-81548448 | None:intergenic | 20.0% |
| !! | TCAGAATAACAAAAAATTAG+GGG | + | chr3.3:81548427-81548446 | None:intergenic | 20.0% |
| !! | TGAAAATAAAATTTAGCTGT+GGG | + | chr3.3:81549097-81549116 | None:intergenic | 20.0% |
| !!! | ATAAATGGGTTAATATCATT+TGG | - | chr3.3:81546624-81546643 | MS.gene41678:intron | 20.0% |
| !!! | TATATCATTTTTGAATCCAA+AGG | - | chr3.3:81546449-81546468 | MS.gene41678:intron | 20.0% |
| !!! | TTTATTTTCCATTTTAGAAG+TGG | + | chr3.3:81546485-81546504 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGCATTTCCTATA+TGG | - | chr3.3:81544935-81544954 | MS.gene41678:intron | 20.0% |
| ! | AACAATCTAAAGAGGAATAT+AGG | - | chr3.3:81546109-81546128 | MS.gene41678:intron | 25.0% |
| ! | AACTAAAGGTTTAAAAACTG+TGG | + | chr3.3:81548376-81548395 | None:intergenic | 25.0% |
| ! | AAGATCATCAAACATAAAGA+GGG | + | chr3.3:81548297-81548316 | None:intergenic | 25.0% |
| ! | AATAGATATGAATCTTTGTG+AGG | - | chr3.3:81546206-81546225 | MS.gene41678:intron | 25.0% |
| ! | AATTATAAGTCACGGTTATT+GGG | + | chr3.3:81545570-81545589 | None:intergenic | 25.0% |
| ! | AGAATAACAAAAAATTAGGG+GGG | + | chr3.3:81548425-81548444 | None:intergenic | 25.0% |
| ! | ATAGATATGAATCTTTGTGA+GGG | - | chr3.3:81546207-81546226 | MS.gene41678:intron | 25.0% |
| ! | ATCTACATCTTCACAATTAT+TGG | - | chr3.3:81546301-81546320 | MS.gene41678:intron | 25.0% |
| ! | ATTTATTCGCTAAAATGAAC+AGG | + | chr3.3:81547619-81547638 | None:intergenic | 25.0% |
| ! | CAGAATAACAAAAAATTAGG+GGG | + | chr3.3:81548426-81548445 | None:intergenic | 25.0% |
| ! | GAAGATATCTTCATACAAAT+TGG | + | chr3.3:81547527-81547546 | None:intergenic | 25.0% |
| ! | GAATATATGTGATGTATTTG+AGG | + | chr3.3:81547302-81547321 | None:intergenic | 25.0% |
| ! | GCAAACAAAAATAAACATGT+GGG | + | chr3.3:81545731-81545750 | None:intergenic | 25.0% |
| ! | TAAAGGACTGATAATTGAAA+AGG | - | chr3.3:81544658-81544677 | MS.gene41678:intron | 25.0% |
| ! | TAAGGAAGTAGATTTCAATA+AGG | - | chr3.3:81548638-81548657 | MS.gene41678:intron | 25.0% |
| ! | TGATAAAATTTCTTCCTTCA+GGG | - | chr3.3:81548797-81548816 | MS.gene41678:intron | 25.0% |
| ! | TTCAAGATAGTTCCATAAAA+AGG | - | chr3.3:81547372-81547391 | MS.gene41678:intron | 25.0% |
| ! | TTGAACATAATCACATATGT+TGG | + | chr3.3:81545041-81545060 | None:intergenic | 25.0% |
| ! | TTTATGGAACTATCTTGAAT+GGG | + | chr3.3:81547371-81547390 | None:intergenic | 25.0% |
| ! | TTTATTCGCTAAAATGAACA+GGG | + | chr3.3:81547618-81547637 | None:intergenic | 25.0% |
| ! | TTTCAATAACCAAAATGGTA+TGG | + | chr3.3:81545805-81545824 | None:intergenic | 25.0% |
| !! | AAGTAATTGGTTTCAACAAA+AGG | + | chr3.3:81545704-81545723 | None:intergenic | 25.0% |
| !! | CTTTTCTATGCATTAAATCA+AGG | + | chr3.3:81548882-81548901 | None:intergenic | 25.0% |
| !! | TATAGTTGATTGAAGTATCA+TGG | - | chr3.3:81545475-81545494 | MS.gene41678:CDS | 25.0% |
| !! | TTCTAACAAAACATGTTTTC+AGG | - | chr3.3:81546507-81546526 | MS.gene41678:intron | 25.0% |
| !! | TTTTATGGAACTATCTTGAA+TGG | + | chr3.3:81547372-81547391 | None:intergenic | 25.0% |
| !! | TTTTGCAATTAAATGTTGAC+AGG | - | chr3.3:81548844-81548863 | MS.gene41678:CDS | 25.0% |
| !!! | AAAAATTTTAACCTGCAAAC+TGG | + | chr3.3:81548691-81548710 | None:intergenic | 25.0% |
| !!! | ACTGACTTTCATTAATCTTT+TGG | - | chr3.3:81545826-81545845 | MS.gene41678:intron | 25.0% |
| !!! | CATTTTTTCTCTCTCAATTT+TGG | - | chr3.3:81544689-81544708 | MS.gene41678:intron | 25.0% |
| !!! | TATCATCCTTTTATTTCCTT+TGG | - | chr3.3:81547692-81547711 | MS.gene41678:intron | 25.0% |
| !!! | TCTAGAGTTTGACTTTTTTT+GGG | - | chr3.3:81547113-81547132 | MS.gene41678:CDS | 25.0% |
| !!! | TGATTTTGGTTATTTTTCCA+GGG | - | chr3.3:81544745-81544764 | MS.gene41678:intron | 25.0% |
| !!! | TTCTAGAGTTTGACTTTTTT+TGG | - | chr3.3:81547112-81547131 | MS.gene41678:CDS | 25.0% |
| !!! | TTGATTTTGGTTATTTTTCC+AGG | - | chr3.3:81544744-81544763 | MS.gene41678:intron | 25.0% |
| !!! | TTGCTTTTATGTTAACAGAA+AGG | - | chr3.3:81546874-81546893 | MS.gene41678:intron | 25.0% |
| AAAAAGCAAACTTCAGAATC+TGG | - | chr3.3:81547819-81547838 | MS.gene41678:intron | 30.0% | |
| AAAGGAAAAGCAAGATACTA+AGG | - | chr3.3:81548208-81548227 | MS.gene41678:intron | 30.0% | |
| AACCGTGACTTATAATTCTA+GGG | - | chr3.3:81545573-81545592 | MS.gene41678:CDS | 30.0% | |
| AAGGAAAAGCAAGATACTAA+GGG | - | chr3.3:81548209-81548228 | MS.gene41678:intron | 30.0% | |
| AATAAAGACAATACCTTTGC+AGG | + | chr3.3:81546949-81546968 | None:intergenic | 30.0% | |
| AATCCTCCAAAGGAAATAAA+AGG | + | chr3.3:81547701-81547720 | None:intergenic | 30.0% | |
| ACTGAATTGTTGTCAAATCT+AGG | + | chr3.3:81545261-81545280 | None:intergenic | 30.0% | |
| AGACTTCAATGCTTAATCTA+GGG | - | chr3.3:81548326-81548345 | MS.gene41678:intron | 30.0% | |
| AGTTGTAGTTGAGATTCTTA+AGG | - | chr3.3:81548620-81548639 | MS.gene41678:intron | 30.0% | |
| ATAAAATTTCTTCCTTCAGG+GGG | - | chr3.3:81548799-81548818 | MS.gene41678:intron | 30.0% | |
| ATGCTCCATAATATACTGTT+TGG | - | chr3.3:81545982-81546001 | MS.gene41678:intron | 30.0% | |
| CAAGATACAAAAAACTGGAA+AGG | - | chr3.3:81548190-81548209 | MS.gene41678:intron | 30.0% | |
| CAAGATCATCAAACATAAAG+AGG | + | chr3.3:81548298-81548317 | None:intergenic | 30.0% | |
| CAGTGTTTCAATAACCAAAA+TGG | + | chr3.3:81545810-81545829 | None:intergenic | 30.0% | |
| CTAGAACGAATATTCAGAAT+TGG | + | chr3.3:81547098-81547117 | None:intergenic | 30.0% | |
| CTGAATTGTTGTCAAATCTA+GGG | + | chr3.3:81545260-81545279 | None:intergenic | 30.0% | |
| CTGATAAAATTTCTTCCTTC+AGG | - | chr3.3:81548796-81548815 | MS.gene41678:intron | 30.0% | |
| GAAGATATCGTGTGAATTTA+GGG | - | chr3.3:81544845-81544864 | MS.gene41678:CDS | 30.0% | |
| GAATAACAAAAAATTAGGGG+GGG | + | chr3.3:81548424-81548443 | None:intergenic | 30.0% | |
| GAATTATAAGTCACGGTTAT+TGG | + | chr3.3:81545571-81545590 | None:intergenic | 30.0% | |
| GATAAAATTTCTTCCTTCAG+GGG | - | chr3.3:81548798-81548817 | MS.gene41678:intron | 30.0% | |
| GGCAAACAAAAATAAACATG+TGG | + | chr3.3:81545732-81545751 | None:intergenic | 30.0% | |
| TAAAAGTAGTAAGAAGACCA+AGG | - | chr3.3:81548569-81548588 | MS.gene41678:intron | 30.0% | |
| TAAACAAGACTTCCAAATAC+TGG | + | chr3.3:81545414-81545433 | None:intergenic | 30.0% | |
| TAACCGTGACTTATAATTCT+AGG | - | chr3.3:81545572-81545591 | MS.gene41678:CDS | 30.0% | |
| TACTTCCAAAAAATCTGTGA+AGG | - | chr3.3:81548007-81548026 | MS.gene41678:intron | 30.0% | |
| TAGACTTCAATGCTTAATCT+AGG | - | chr3.3:81548325-81548344 | MS.gene41678:intron | 30.0% | |
| TAGATATGAATCTTTGTGAG+GGG | - | chr3.3:81546208-81546227 | MS.gene41678:intron | 30.0% | |
| TCATCAATCAGTTAAGACAA+AGG | + | chr3.3:81546725-81546744 | None:intergenic | 30.0% | |
| TCTTCCCAAACAGTATATTA+TGG | + | chr3.3:81545990-81546009 | None:intergenic | 30.0% | |
| TGAAGATATCGTGTGAATTT+AGG | - | chr3.3:81544844-81544863 | MS.gene41678:CDS | 30.0% | |
| TGACAAGTATTATGCATGTA+CGG | + | chr3.3:81545753-81545772 | None:intergenic | 30.0% | |
| TGCAGAAAATAGAATCTTGT+GGG | - | chr3.3:81549067-81549086 | MS.gene41678:CDS | 30.0% | |
| TGCTCAAAAGTAACTATGTA+AGG | + | chr3.3:81544816-81544835 | None:intergenic | 30.0% | |
| TGCTCCATAATATACTGTTT+GGG | - | chr3.3:81545983-81546002 | MS.gene41678:intron | 30.0% | |
| TGTTATGTGTATGGTATTAG+TGG | - | chr3.3:81545851-81545870 | MS.gene41678:intron | 30.0% | |
| TTATGTGCAAACTATTTCAG+TGG | - | chr3.3:81545918-81545937 | MS.gene41678:intron | 30.0% | |
| TTCAATTATCAGTCCTTTAC+TGG | + | chr3.3:81544657-81544676 | None:intergenic | 30.0% | |
| TTCATCATCATCATCTTTCT+CGG | + | chr3.3:81544441-81544460 | None:intergenic | 30.0% | |
| TTTAATGCATAGAAAAGCAG+AGG | - | chr3.3:81548885-81548904 | MS.gene41678:CDS | 30.0% | |
| ! | AAAGATGATGATGATGAAGA+TGG | - | chr3.3:81544443-81544462 | MS.gene41678:intron | 30.0% |
| ! | AAAGCTTTGGTAGGTATATT+TGG | - | chr3.3:81549144-81549163 | MS.gene41678:CDS | 30.0% |
| ! | AAATAATGGAAGTGATAACG+AGG | - | chr3.3:81547938-81547957 | MS.gene41678:intron | 30.0% |
| ! | ATCTGTTACTTGTAATATGC+TGG | - | chr3.3:81547442-81547461 | MS.gene41678:intron | 30.0% |
| ! | ATGTTGACAGGTAAACATTT+TGG | - | chr3.3:81548856-81548875 | MS.gene41678:CDS | 30.0% |
| ! | CTGAAGGAAGAAATTTTATC+AGG | + | chr3.3:81548798-81548817 | None:intergenic | 30.0% |
| ! | CTTTTACCTTTACCTACAAT+TGG | + | chr3.3:81548555-81548574 | None:intergenic | 30.0% |
| ! | GGTTCTAATTAAAGTCAATC+AGG | + | chr3.3:81547597-81547616 | None:intergenic | 30.0% |
| ! | TAGAGCATCTATCATAGAAA+AGG | + | chr3.3:81549184-81549203 | None:intergenic | 30.0% |
| ! | TGATTTGGATAGTTGTATTG+TGG | - | chr3.3:81547198-81547217 | MS.gene41678:intron | 30.0% |
| ! | TTCAAGTACCACTTCTAAAA+TGG | - | chr3.3:81546474-81546493 | MS.gene41678:intron | 30.0% |
| ! | TTCACACTACTCTTGTTTAT+TGG | + | chr3.3:81546414-81546433 | None:intergenic | 30.0% |
| ! | TTCTCATTGTTGCCTTTTTA+TGG | + | chr3.3:81547387-81547406 | None:intergenic | 30.0% |
| ! | TTTTGAATATGTCTTGATGC+AGG | - | chr3.3:81548729-81548748 | MS.gene41678:intron | 30.0% |
| !! | GACATCTGTCTTTTTCATTA+TGG | - | chr3.3:81545319-81545338 | MS.gene41678:CDS | 30.0% |
| !! | TAACAAAACATGTTTTCAGG+AGG | - | chr3.3:81546510-81546529 | MS.gene41678:intron | 30.0% |
| !! | TTAAGCATTGAAGTCTATAG+AGG | + | chr3.3:81548322-81548341 | None:intergenic | 30.0% |
| !!! | CTTTCCAGTTTTTTGTATCT+TGG | + | chr3.3:81548192-81548211 | None:intergenic | 30.0% |
| !!! | TCTCTCAATTTTGGTTTTTG+AGG | - | chr3.3:81544698-81544717 | MS.gene41678:intron | 30.0% |
| AAAAAAGTCAATTACCGAGC+AGG | - | chr3.3:81548130-81548149 | MS.gene41678:intron | 35.0% | |
| AAAACAGAGAACAAGGGTAA+AGG | - | chr3.3:81546329-81546348 | MS.gene41678:intron | 35.0% | |
| AAACAAGAGTAGTGTGAAGA+AGG | - | chr3.3:81546416-81546435 | MS.gene41678:intron | 35.0% | |
| AAAGCAAGATACTAAGGGAA+AGG | - | chr3.3:81548214-81548233 | MS.gene41678:intron | 35.0% | |
| AAGTGGTACTTGAATTCCTT+TGG | + | chr3.3:81546468-81546487 | None:intergenic | 35.0% | |
| AATGTCAGAACCTGATTGAA+AGG | - | chr3.3:81547023-81547042 | MS.gene41678:intron | 35.0% | |
| ACAAAAGGTTGCTTGTATGT+TGG | + | chr3.3:81545689-81545708 | None:intergenic | 35.0% | |
| ACAAATATGTGTCACCAGTA+TGG | + | chr3.3:81545004-81545023 | None:intergenic | 35.0% | |
| ACATCTTCACAATTATTGGC+AGG | - | chr3.3:81546305-81546324 | MS.gene41678:intron | 35.0% | |
| ACCGTGACTTATAATTCTAG+GGG | - | chr3.3:81545574-81545593 | MS.gene41678:CDS | 35.0% | |
| ACTGTTTGGGAAGAAAACAA+AGG | - | chr3.3:81545996-81546015 | MS.gene41678:intron | 35.0% | |
| AGGCAATTAGACATACCATT+AGG | + | chr3.3:81544796-81544815 | None:intergenic | 35.0% | |
| ATACTCACATGACCAGTATT+TGG | - | chr3.3:81545399-81545418 | MS.gene41678:CDS | 35.0% | |
| ATCACCATCACAACATTGAA+AGG | + | chr3.3:81547182-81547201 | None:intergenic | 35.0% | |
| ATTGCAGCTGTTAAGAACAA+TGG | - | chr3.3:81545498-81545517 | MS.gene41678:CDS | 35.0% | |
| CAATAACCAAAATGGTATGG+CGG | + | chr3.3:81545802-81545821 | None:intergenic | 35.0% | |
| CTGCAGAAAATAGAATCTTG+TGG | - | chr3.3:81549066-81549085 | MS.gene41678:CDS | 35.0% | |
| GACTTCAATGCTTAATCTAG+GGG | - | chr3.3:81548327-81548346 | MS.gene41678:intron | 35.0% | |
| GCAAATTAATATCAGCCACA+AGG | + | chr3.3:81546275-81546294 | None:intergenic | 35.0% | |
| GCAACCAAGATACAAAAAAC+TGG | - | chr3.3:81548185-81548204 | MS.gene41678:intron | 35.0% | |
| GTATATTATGGAGCATATGC+AGG | + | chr3.3:81545978-81545997 | None:intergenic | 35.0% | |
| GTCAGGTTAACAATCTAAAG+AGG | - | chr3.3:81546101-81546120 | MS.gene41678:intron | 35.0% | |
| GTCTGTTTGTGTTTGTTCAT+TGG | - | chr3.3:81544877-81544896 | MS.gene41678:CDS | 35.0% | |
| GTTACTTCAACTTCTTCTTC+TGG | + | chr3.3:81544356-81544375 | None:intergenic | 35.0% | |
| GTTACTTGTAATATGCTGGT+TGG | - | chr3.3:81547446-81547465 | MS.gene41678:intron | 35.0% | |
| TACATAACAATAGTGCACTG+CGG | + | chr3.3:81546997-81547016 | None:intergenic | 35.0% | |
| TCACTTATTTCACACACACT+AGG | + | chr3.3:81547747-81547766 | None:intergenic | 35.0% | |
| TCAGAAAGAACTAAGTAAGC+AGG | + | chr3.3:81548530-81548549 | None:intergenic | 35.0% | |
| TCATAACAGAAATCCTCCAA+AGG | + | chr3.3:81547711-81547730 | None:intergenic | 35.0% | |
| TCCAAAAAATCTGTGAAGGA+GGG | - | chr3.3:81548011-81548030 | MS.gene41678:intron | 35.0% | |
| TCTTCTTGCTGAAAAAGAAC+AGG | - | chr3.3:81546588-81546607 | MS.gene41678:intron | 35.0% | |
| TGAACTGAAAATCTGAGTCT+AGG | + | chr3.3:81545350-81545369 | None:intergenic | 35.0% | |
| TGCAACATCTTCATCTTCTT+GGG | + | chr3.3:81547913-81547932 | None:intergenic | 35.0% | |
| TGTATTGTGGATTTCTTACC+TGG | - | chr3.3:81547211-81547230 | MS.gene41678:intron | 35.0% | |
| TTACTCTTCATCTTCATCAC+TGG | + | chr3.3:81549025-81549044 | None:intergenic | 35.0% | |
| TTCACATGCATACATCTGTA+GGG | - | chr3.3:81545290-81545309 | MS.gene41678:CDS | 35.0% | |
| TTCCAAAAAATCTGTGAAGG+AGG | - | chr3.3:81548010-81548029 | MS.gene41678:intron | 35.0% | |
| TTCTTTCTGATGCCAATTGT+AGG | - | chr3.3:81548540-81548559 | MS.gene41678:intron | 35.0% | |
| TTTCACATGCATACATCTGT+AGG | - | chr3.3:81545289-81545308 | MS.gene41678:CDS | 35.0% | |
| ! | ACATGTGGGCTATAAGTAAT+TGG | + | chr3.3:81545717-81545736 | None:intergenic | 35.0% |
| ! | GATTTCTTACCTGGTTTGTA+AGG | - | chr3.3:81547220-81547239 | MS.gene41678:intron | 35.0% |
| ! | TATCTAATTGACTCTACCTG+TGG | - | chr3.3:81545604-81545623 | MS.gene41678:CDS | 35.0% |
| ! | TCAATGTTGTGATGGTGATT+TGG | - | chr3.3:81547183-81547202 | MS.gene41678:intron | 35.0% |
| ! | TTCAACTTCTTCTTCTGGTT+TGG | + | chr3.3:81544351-81544370 | None:intergenic | 35.0% |
| ! | TTTTATGACCATAAGTCCAC+AGG | + | chr3.3:81545623-81545642 | None:intergenic | 35.0% |
| ! | TTTTCCTATGTTACACGCAT+AGG | - | chr3.3:81545443-81545462 | MS.gene41678:CDS | 35.0% |
| !! | CATCCTTTTATTTCCTTTGG+AGG | - | chr3.3:81547695-81547714 | MS.gene41678:intron | 35.0% |
| !! | TCAACTTCTTCTTCTGGTTT+GGG | + | chr3.3:81544350-81544369 | None:intergenic | 35.0% |
| !! | TTGGAAGTCTTGTTTACATC+TGG | - | chr3.3:81545418-81545437 | MS.gene41678:CDS | 35.0% |
| !! | TTTACAGAAAGTGTCATCCA+AGG | + | chr3.3:81547348-81547367 | None:intergenic | 35.0% |
| !!! | CTGAAGTTTGCTTTTTCTTC+TGG | + | chr3.3:81547815-81547834 | None:intergenic | 35.0% |
| !!! | GTTTTCGACTTGTTTTGGTT+TGG | + | chr3.3:81544312-81544331 | None:intergenic | 35.0% |
| !!! | GTTTTTTGTATCTTGGTTGC+AGG | + | chr3.3:81548185-81548204 | None:intergenic | 35.0% |
| !!! | TGCTCGGTAATTGACTTTTT+TGG | + | chr3.3:81548131-81548150 | None:intergenic | 35.0% |
| !!! | TGGAGTTTTTTCACTGCTTT+TGG | + | chr3.3:81548096-81548115 | None:intergenic | 35.0% |
| !!! | TTTTGGTTTGGTATCGTCTA+GGG | + | chr3.3:81544300-81544319 | None:intergenic | 35.0% |
| AAAGCCTTCTGATGTTGAAG+AGG | - | chr3.3:81547851-81547870 | MS.gene41678:intron | 40.0% | |
| AACATCAGTAGTAGCATGTG+GGG | + | chr3.3:81546569-81546588 | None:intergenic | 40.0% | |
| ACATGATGATCTGATCCTTG+TGG | - | chr3.3:81546257-81546276 | MS.gene41678:intron | 40.0% | |
| AGAACATCAGTAGTAGCATG+TGG | + | chr3.3:81546571-81546590 | None:intergenic | 40.0% | |
| AGAAGATGAAGATGTTGCAG+TGG | - | chr3.3:81547914-81547933 | MS.gene41678:intron | 40.0% | |
| AGAGGTCTTCTTAACAGATG+TGG | + | chr3.3:81548063-81548082 | None:intergenic | 40.0% | |
| ATGTCTGATGAGGAAGATGA+AGG | - | chr3.3:81548940-81548959 | MS.gene41678:CDS | 40.0% | |
| ATTGTGCTTGATCACGACTT+TGG | - | chr3.3:81547138-81547157 | MS.gene41678:CDS | 40.0% | |
| CAAGAAATTATTCCCCCTGA+AGG | + | chr3.3:81548814-81548833 | None:intergenic | 40.0% | |
| CAGCTCAAGGATATTCCTAA+TGG | - | chr3.3:81544778-81544797 | MS.gene41678:intron | 40.0% | |
| CAGTTCAGCATGACAACTAA+AGG | + | chr3.3:81548390-81548409 | None:intergenic | 40.0% | |
| CCCCCTAGAATTATAAGTCA+CGG | + | chr3.3:81545578-81545597 | None:intergenic | 40.0% | |
| CCGTGACTTATAATTCTAGG+GGG | - | chr3.3:81545575-81545594 | MS.gene41678:CDS | 40.0% | |
| CTGATGCCAATTGTAGGTAA+AGG | - | chr3.3:81548546-81548565 | MS.gene41678:intron | 40.0% | |
| CTGCAACATCTTCATCTTCT+TGG | + | chr3.3:81547914-81547933 | None:intergenic | 40.0% | |
| GAACATCAGTAGTAGCATGT+GGG | + | chr3.3:81546570-81546589 | None:intergenic | 40.0% | |
| GACACCTTTCAATGTTGTGA+TGG | - | chr3.3:81547175-81547194 | MS.gene41678:intron | 40.0% | |
| GATGTTGCAGTGGCAAATAA+TGG | - | chr3.3:81547924-81547943 | MS.gene41678:intron | 40.0% | |
| GATTGTTAACCTGACCATTC+AGG | + | chr3.3:81546096-81546115 | None:intergenic | 40.0% | |
| GCAATTCATTACCAGTTTGC+AGG | - | chr3.3:81548677-81548696 | MS.gene41678:intron | 40.0% | |
| GCAGGAAAAACAGAGAACAA+GGG | - | chr3.3:81546323-81546342 | MS.gene41678:intron | 40.0% | |
| GGAAAAAGATCGTACCAAGT+TGG | + | chr3.3:81548777-81548796 | None:intergenic | 40.0% | |
| TAAGAAGCTGCAGAAAGAAC+TGG | + | chr3.3:81547654-81547673 | None:intergenic | 40.0% | |
| TCATCCTCTTCAACATCAGA+AGG | + | chr3.3:81547858-81547877 | None:intergenic | 40.0% | |
| TCTCCTGTTAGCTGTCTATA+CGG | - | chr3.3:81549118-81549137 | MS.gene41678:CDS | 40.0% | |
| TGAACTTGACCTTACAAACC+AGG | + | chr3.3:81547232-81547251 | None:intergenic | 40.0% | |
| TGAAGTAACTGAACAAGACG+CGG | - | chr3.3:81544367-81544386 | MS.gene41678:intron | 40.0% | |
| TGACCATTCAGGAATAGCAA+AGG | + | chr3.3:81546085-81546104 | None:intergenic | 40.0% | |
| TGCAAAGCTGTTGGAATTTC+TGG | - | chr3.3:81546540-81546559 | MS.gene41678:CDS | 40.0% | |
| TTGACGTGTTTGTGTTGTGT+CGG | - | chr3.3:81545095-81545114 | MS.gene41678:intron | 40.0% | |
| TTGCATCAGAAAGTTCAGCT+TGG | + | chr3.3:81547881-81547900 | None:intergenic | 40.0% | |
| ! | AAAAGATCGTACCAAGTTGG+CGG | + | chr3.3:81548774-81548793 | None:intergenic | 40.0% |
| ! | AATGGAAGTGATAACGAGGT+GGG | - | chr3.3:81547942-81547961 | MS.gene41678:intron | 40.0% |
| ! | AGGAATATAGGCCAGTTTTC+TGG | - | chr3.3:81546121-81546140 | MS.gene41678:intron | 40.0% |
| ! | ATACGGGTTAAAGCTTTGGT+AGG | - | chr3.3:81549135-81549154 | MS.gene41678:CDS | 40.0% |
| ! | CTTTTGGCGTGTTATGTGTA+TGG | - | chr3.3:81545842-81545861 | MS.gene41678:intron | 40.0% |
| ! | GTACTTGTTACTCTACTGGT+TGG | - | chr3.3:81548349-81548368 | MS.gene41678:intron | 40.0% |
| ! | GTCTATACGGGTTAAAGCTT+TGG | - | chr3.3:81549131-81549150 | MS.gene41678:CDS | 40.0% |
| ! | GTGATGTATTTGAGGCTGAA+TGG | + | chr3.3:81547294-81547313 | None:intergenic | 40.0% |
| ! | TAATGGAAGTGATAACGAGG+TGG | - | chr3.3:81547941-81547960 | MS.gene41678:intron | 40.0% |
| ! | TGTGGATTTAGCTTCAGCTT+TGG | + | chr3.3:81548045-81548064 | None:intergenic | 40.0% |
| ! | TGTTGTGTCGGTGCTTTAAA+GGG | - | chr3.3:81545107-81545126 | MS.gene41678:intron | 40.0% |
| ! | TTATGTGTGGGCTGAAAATG+AGG | - | chr3.3:81546144-81546163 | MS.gene41678:intron | 40.0% |
| ! | TTTGGTATCGTCTAGGGTTT+CGG | + | chr3.3:81544294-81544313 | None:intergenic | 40.0% |
| ! | TTTTGTCCGCCATACCATTT+TGG | - | chr3.3:81545793-81545812 | MS.gene41678:intron | 40.0% |
| !! | ACACCTTTGCTATTCCTGAA+TGG | - | chr3.3:81546079-81546098 | MS.gene41678:intron | 40.0% |
| !! | GAAGTACTCTTGTGAGCTTT+TGG | + | chr3.3:81547993-81548012 | None:intergenic | 40.0% |
| !! | GCTTCGTTTTCGACTTGTTT+TGG | + | chr3.3:81544317-81544336 | None:intergenic | 40.0% |
| !! | TTCTGGTTTGGGTTCATCTT+TGG | + | chr3.3:81544339-81544358 | None:intergenic | 40.0% |
| !! | TTTGCTATTCCTGAATGGTC+AGG | - | chr3.3:81546084-81546103 | MS.gene41678:intron | 40.0% |
| !!! | ACCCTCCTTCACAGATTTTT+TGG | + | chr3.3:81548015-81548034 | None:intergenic | 40.0% |
| !!! | CCAGTTTTCTGGTTATGTGT+GGG | - | chr3.3:81546132-81546151 | MS.gene41678:intron | 40.0% |
| !!! | GTTTTGGTTTGGTATCGTCT+AGG | + | chr3.3:81544301-81544320 | None:intergenic | 40.0% |
| AAAATTAGGGGGGGACAAAC+AGG | + | chr3.3:81548415-81548434 | None:intergenic | 45.0% | |
| AACCCGTATAGACAGCTAAC+AGG | + | chr3.3:81549124-81549143 | None:intergenic | 45.0% | |
| AACGAGGTGGGTAAATCAGA+GGG | - | chr3.3:81547954-81547973 | MS.gene41678:intron | 45.0% | |
| AAGAGAAGCAGAATCCTGCT+CGG | + | chr3.3:81548147-81548166 | None:intergenic | 45.0% | |
| AAGCAAAACTGCAAAGGCTG+CGG | - | chr3.3:81548241-81548260 | MS.gene41678:intron | 45.0% | |
| AAGTGTCATCCAAGGCAGAA+TGG | + | chr3.3:81547340-81547359 | None:intergenic | 45.0% | |
| AGAGAACAAGGGTAAAGGAG+AGG | - | chr3.3:81546334-81546353 | MS.gene41678:intron | 45.0% | |
| CCCACACATAACCAGAAAAC+TGG | + | chr3.3:81546135-81546154 | None:intergenic | 45.0% | |
| CTCCTGTTAGCTGTCTATAC+GGG | - | chr3.3:81549119-81549138 | MS.gene41678:CDS | 45.0% | |
| CTTCACCTTCGAAGTTTGGA+AGG | - | chr3.3:81544624-81544643 | MS.gene41678:intron | 45.0% | |
| CTTCCAAACTTCGAAGGTGA+AGG | + | chr3.3:81544626-81544645 | None:intergenic | 45.0% | |
| GAACCTTCACCTTCGAAGTT+TGG | - | chr3.3:81544620-81544639 | MS.gene41678:intron | 45.0% | |
| GAAGACCTTCCAAACTTCGA+AGG | + | chr3.3:81544632-81544651 | None:intergenic | 45.0% | |
| GAAGATGCTGGTGAGAAGAA+GGG | - | chr3.3:81544503-81544522 | MS.gene41678:intron | 45.0% | |
| GATGTCGATGCGGGTAAAAA+TGG | - | chr3.3:81548994-81549013 | MS.gene41678:CDS | 45.0% | |
| GCATAGAAAAGCAGAGGTGA+AGG | - | chr3.3:81548891-81548910 | MS.gene41678:CDS | 45.0% | |
| GGAAGGTCTTCTTCCAGTAA+AGG | - | chr3.3:81544641-81544660 | MS.gene41678:intron | 45.0% | |
| GGCAGGAAAAACAGAGAACA+AGG | - | chr3.3:81546322-81546341 | MS.gene41678:intron | 45.0% | |
| TAACGAGGTGGGTAAATCAG+AGG | - | chr3.3:81547953-81547972 | MS.gene41678:intron | 45.0% | |
| TCATCCAAGGCAGAATGGTT+GGG | + | chr3.3:81547335-81547354 | None:intergenic | 45.0% | |
| TGACTCTACCTGTGGACTTA+TGG | - | chr3.3:81545612-81545631 | MS.gene41678:CDS | 45.0% | |
| TGATGAGGAAGATGAAGGTG+AGG | - | chr3.3:81548945-81548964 | MS.gene41678:CDS | 45.0% | |
| TGTGCCTATGCGTGTAACAT+AGG | + | chr3.3:81545450-81545469 | None:intergenic | 45.0% | |
| ! | AAGCTGATAGTGATGGCGAT+GGG | - | chr3.3:81548971-81548990 | MS.gene41678:CDS | 45.0% |
| ! | GAGGAAGAAGCTGATAGTGA+TGG | - | chr3.3:81548964-81548983 | MS.gene41678:CDS | 45.0% |
| ! | GTGTTGTGTCGGTGCTTTAA+AGG | - | chr3.3:81545106-81545125 | MS.gene41678:intron | 45.0% |
| !! | AGGGGTACTTGTTACTCTAC+TGG | - | chr3.3:81548345-81548364 | MS.gene41678:intron | 45.0% |
| !! | TCAGGAATAGCAAAGGTGTC+AGG | + | chr3.3:81546078-81546097 | None:intergenic | 45.0% |
| !! | TTCTCCAGGAGATTTGCTAG+AGG | + | chr3.3:81546923-81546942 | None:intergenic | 45.0% |
| !!! | GCCAGTTTTCTGGTTATGTG+TGG | - | chr3.3:81546131-81546150 | MS.gene41678:intron | 45.0% |
| !!! | TGGTTATTTTTCCAGGGACG+TGG | - | chr3.3:81544751-81544770 | MS.gene41678:intron | 45.0% |
| !!! | ATATTTTTCTTTTTTAAATA+TGG | - | chr3.3:81548482-81548501 | MS.gene41678:intron | 5.0% |
| AACTAGGGAAAGGAAGACGG+TGG | - | chr3.3:81544586-81544605 | MS.gene41678:CDS | 50.0% | |
| AACTGCAAAGGCTGCGGTTA+AGG | - | chr3.3:81548247-81548266 | MS.gene41678:intron | 50.0% | |
| AAGGCTGCGGTTAAGGATCA+AGG | - | chr3.3:81548254-81548273 | MS.gene41678:intron | 50.0% | |
| ACCGTCTTCCTTTCCCTAGT+TGG | + | chr3.3:81544587-81544606 | None:intergenic | 50.0% | |
| ACCTTTGCAGGTGTTTCTCC+AGG | + | chr3.3:81546937-81546956 | None:intergenic | 50.0% | |
| AGCATATGCAGGTTGTCGTC+AGG | + | chr3.3:81545967-81545986 | None:intergenic | 50.0% | |
| CCACGTGCAACCTTTCAATC+AGG | + | chr3.3:81547036-81547055 | None:intergenic | 50.0% | |
| CCTGATTGAAAGGTTGCACG+TGG | - | chr3.3:81547033-81547052 | MS.gene41678:intron | 50.0% | |
| CTATCACTCGTCGGAGTAAC+CGG | + | chr3.3:81544563-81544582 | None:intergenic | 50.0% | |
| GACGAGTGATAGGCCAACTA+GGG | - | chr3.3:81544571-81544590 | MS.gene41678:CDS | 50.0% | |
| GCAACCTCTAGCAAATCTCC+TGG | - | chr3.3:81546916-81546935 | MS.gene41678:CDS | 50.0% | |
| GCCAACTAGGGAAAGGAAGA+CGG | - | chr3.3:81544583-81544602 | MS.gene41678:CDS | 50.0% | |
| GGAACTGTCTGCAAAGCTGT+TGG | - | chr3.3:81546531-81546550 | MS.gene41678:intron | 50.0% | |
| GGAAGATGCTGGTGAGAAGA+AGG | - | chr3.3:81544502-81544521 | MS.gene41678:intron | 50.0% | |
| GGCTGCAAGCAAAACTGCAA+AGG | - | chr3.3:81548235-81548254 | MS.gene41678:intron | 50.0% | |
| GTCATCCAAGGCAGAATGGT+TGG | + | chr3.3:81547336-81547355 | None:intergenic | 50.0% | |
| GTCGTCAGAGAAGAAGAGTC+CGG | - | chr3.3:81544541-81544560 | MS.gene41678:intron | 50.0% | |
| GTGATAGGCCAACTAGGGAA+AGG | - | chr3.3:81544576-81544595 | MS.gene41678:CDS | 50.0% | |
| TACTCCCAACCATTCTGCCT+TGG | - | chr3.3:81547328-81547347 | MS.gene41678:CDS | 50.0% | |
| TCCTGGAGAAACACCTGCAA+AGG | - | chr3.3:81546933-81546952 | MS.gene41678:CDS | 50.0% | |
| TGTCACCAGTATGGCGAGTT+CGG | + | chr3.3:81544995-81545014 | None:intergenic | 50.0% | |
| TGTGATATCCTCCGCCAACT+TGG | - | chr3.3:81548760-81548779 | MS.gene41678:intron | 50.0% | |
| ! | AGCTGATAGTGATGGCGATG+GGG | - | chr3.3:81548972-81548991 | MS.gene41678:CDS | 50.0% |
| ! | CGATGCTGATGCTGATGATG+AGG | - | chr3.3:81544475-81544494 | MS.gene41678:intron | 50.0% |
| ! | CTAGTTGGCCTATCACTCGT+CGG | + | chr3.3:81544572-81544591 | None:intergenic | 50.0% |
| ! | GAAGCTGATAGTGATGGCGA+TGG | - | chr3.3:81548970-81548989 | MS.gene41678:CDS | 50.0% |
| ! | GCTTTTGGCAGCTTTTGCAG+AGG | + | chr3.3:81548081-81548100 | None:intergenic | 50.0% |
| ! | TGATGCTGATGATGAGGAGG+AGG | - | chr3.3:81544481-81544500 | MS.gene41678:intron | 50.0% |
| ! | TGCTGATGCTGATGATGAGG+AGG | - | chr3.3:81544478-81544497 | MS.gene41678:intron | 50.0% |
| !! | AGTTCGGTGTGTGACACGTT+GGG | + | chr3.3:81544979-81544998 | None:intergenic | 50.0% |
| !! | GGTTGCAGGTTGATCTGACT+TGG | + | chr3.3:81548171-81548190 | None:intergenic | 50.0% |
| ACACACCGAACTCGCCATAC+TGG | - | chr3.3:81544987-81545006 | MS.gene41678:intron | 55.0% | |
| AGACCAAGGTAGAGCCGAGT+AGG | - | chr3.3:81548583-81548602 | MS.gene41678:intron | 55.0% | |
| CGACGAGTGATAGGCCAACT+AGG | - | chr3.3:81544570-81544589 | MS.gene41678:CDS | 55.0% | |
| CGGTTACTCCGACGAGTGAT+AGG | - | chr3.3:81544561-81544580 | MS.gene41678:CDS | 55.0% | |
| GATGAGGAGGAGGAAGATGC+TGG | - | chr3.3:81544491-81544510 | MS.gene41678:intron | 55.0% | |
| GGTGGGTAAATCAGAGGGAG+AGG | - | chr3.3:81547959-81547978 | MS.gene41678:intron | 55.0% | |
| ! | AGATCGTACCAAGTTGGCGG+AGG | + | chr3.3:81548771-81548790 | None:intergenic | 55.0% |
| !! | GAGTTCGGTGTGTGACACGT+TGG | + | chr3.3:81544980-81544999 | None:intergenic | 55.0% |
| !! | GTTCGGTGTGTGACACGTTG+GGG | + | chr3.3:81544978-81544997 | None:intergenic | 55.0% |
| CAAGGTAGAGCCGAGTAGGC+AGG | - | chr3.3:81548587-81548606 | MS.gene41678:intron | 60.0% | |
| CTGCCTACTCGGCTCTACCT+TGG | + | chr3.3:81548589-81548608 | None:intergenic | 60.0% | |
| GCGTGCATGTCCTGCCTACT+CGG | + | chr3.3:81548600-81548619 | None:intergenic | 60.0% | |
| GGGACGTGGTACTCAGCTCA+AGG | - | chr3.3:81544765-81544784 | MS.gene41678:intron | 60.0% | |
| TGAGCTGAGTACCACGTCCC+TGG | + | chr3.3:81544765-81544784 | None:intergenic | 60.0% | |
| TGGCGATGGGGATGTCGATG+CGG | - | chr3.3:81548984-81549003 | MS.gene41678:CDS | 60.0% | |
| GGCGATGGGGATGTCGATGC+GGG | - | chr3.3:81548985-81549004 | MS.gene41678:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 81544284 | 81549204 | 81544284 | ID=MS.gene41678 |
| chr3.3 | mRNA | 81544284 | 81549204 | 81544284 | ID=MS.gene41678.t1;Parent=MS.gene41678 |
| chr3.3 | exon | 81548809 | 81549204 | 81548809 | ID=MS.gene41678.t1.exon1;Parent=MS.gene41678.t1 |
| chr3.3 | CDS | 81548809 | 81549204 | 81548809 | ID=cds.MS.gene41678.t1;Parent=MS.gene41678.t1 |
| chr3.3 | exon | 81548689 | 81548722 | 81548689 | ID=MS.gene41678.t1.exon2;Parent=MS.gene41678.t1 |
| chr3.3 | CDS | 81548689 | 81548722 | 81548689 | ID=cds.MS.gene41678.t1;Parent=MS.gene41678.t1 |
| chr3.3 | exon | 81547471 | 81547550 | 81547471 | ID=MS.gene41678.t1.exon3;Parent=MS.gene41678.t1 |
| chr3.3 | CDS | 81547471 | 81547550 | 81547471 | ID=cds.MS.gene41678.t1;Parent=MS.gene41678.t1 |
| chr3.3 | exon | 81547323 | 81547382 | 81547323 | ID=MS.gene41678.t1.exon4;Parent=MS.gene41678.t1 |
| chr3.3 | CDS | 81547323 | 81547382 | 81547323 | ID=cds.MS.gene41678.t1;Parent=MS.gene41678.t1 |
| chr3.3 | exon | 81547051 | 81547161 | 81547051 | ID=MS.gene41678.t1.exon5;Parent=MS.gene41678.t1 |
| chr3.3 | CDS | 81547051 | 81547161 | 81547051 | ID=cds.MS.gene41678.t1;Parent=MS.gene41678.t1 |
| chr3.3 | exon | 81546879 | 81546959 | 81546879 | ID=MS.gene41678.t1.exon6;Parent=MS.gene41678.t1 |
| chr3.3 | CDS | 81546879 | 81546959 | 81546879 | ID=cds.MS.gene41678.t1;Parent=MS.gene41678.t1 |
| chr3.3 | exon | 81546534 | 81546596 | 81546534 | ID=MS.gene41678.t1.exon7;Parent=MS.gene41678.t1 |
| chr3.3 | CDS | 81546534 | 81546596 | 81546534 | ID=cds.MS.gene41678.t1;Parent=MS.gene41678.t1 |
| chr3.3 | exon | 81545213 | 81545672 | 81545213 | ID=MS.gene41678.t1.exon8;Parent=MS.gene41678.t1 |
| chr3.3 | CDS | 81545213 | 81545672 | 81545213 | ID=cds.MS.gene41678.t1;Parent=MS.gene41678.t1 |
| chr3.3 | exon | 81544829 | 81544926 | 81544829 | ID=MS.gene41678.t1.exon9;Parent=MS.gene41678.t1 |
| chr3.3 | CDS | 81544829 | 81544926 | 81544829 | ID=cds.MS.gene41678.t1;Parent=MS.gene41678.t1 |
| chr3.3 | exon | 81544707 | 81544737 | 81544707 | ID=MS.gene41678.t1.exon10;Parent=MS.gene41678.t1 |
| chr3.3 | CDS | 81544707 | 81544737 | 81544707 | ID=cds.MS.gene41678.t1;Parent=MS.gene41678.t1 |
| chr3.3 | exon | 81544561 | 81544622 | 81544561 | ID=MS.gene41678.t1.exon11;Parent=MS.gene41678.t1 |
| chr3.3 | CDS | 81544561 | 81544622 | 81544561 | ID=cds.MS.gene41678.t1;Parent=MS.gene41678.t1 |
| chr3.3 | exon | 81544284 | 81544292 | 81544284 | ID=MS.gene41678.t1.exon12;Parent=MS.gene41678.t1 |
| chr3.3 | CDS | 81544284 | 81544292 | 81544284 | ID=cds.MS.gene41678.t1;Parent=MS.gene41678.t1 |
| Gene Sequence |
| Protein sequence |
