Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02205.t1 | XP_024631819.1 | 98.1 | 824 | 15 | 1 | 1 | 823 | 1 | 824 | 0.00E+00 | 1552 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02205.t1 | Q8S944 | 71.3 | 760 | 200 | 5 | 18 | 770 | 32 | 780 | 7.3e-304 | 1044.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02205.t1 | G7IS66 | 98.1 | 824 | 15 | 1 | 1 | 823 | 1 | 824 | 0.0e+00 | 1552.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene02205 | MS.gene047680 | PPI |
| MS.gene02205 | MS.gene002248 | PPI |
| MS.gene26060 | MS.gene02205 | PPI |
| MS.gene010879 | MS.gene02205 | PPI |
| MS.gene013409 | MS.gene02205 | PPI |
| MS.gene059335 | MS.gene02205 | PPI |
| MS.gene06506 | MS.gene02205 | PPI |
| MS.gene06504 | MS.gene02205 | PPI |
| MS.gene02205 | MS.gene059331 | PPI |
| MS.gene010407 | MS.gene02205 | PPI |
| MS.gene049382 | MS.gene02205 | PPI |
| MS.gene01221 | MS.gene02205 | PPI |
| MS.gene02205 | MS.gene068015 | PPI |
| MS.gene02205 | MS.gene013407 | PPI |
| MS.gene028493 | MS.gene02205 | PPI |
| MS.gene050237 | MS.gene02205 | PPI |
| MS.gene056130 | MS.gene02205 | PPI |
| MS.gene053588 | MS.gene02205 | PPI |
| MS.gene90230 | MS.gene02205 | PPI |
| MS.gene71381 | MS.gene02205 | PPI |
| MS.gene39347 | MS.gene02205 | PPI |
| MS.gene041137 | MS.gene02205 | PPI |
| MS.gene022695 | MS.gene02205 | PPI |
| MS.gene059333 | MS.gene02205 | PPI |
| MS.gene39665 | MS.gene02205 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02205.t1 | MTR_2g009690 | 99.150 | 824 | 6 | 1 | 1 | 823 | 1 | 824 | 0.0 | 1674 |
| MS.gene02205.t1 | MTR_4g093750 | 82.000 | 750 | 124 | 4 | 18 | 763 | 10 | 752 | 0.0 | 1217 |
| MS.gene02205.t1 | MTR_4g093750 | 81.886 | 668 | 110 | 3 | 18 | 683 | 10 | 668 | 0.0 | 1078 |
| MS.gene02205.t1 | MTR_5g009150 | 38.632 | 497 | 285 | 4 | 23 | 507 | 4 | 492 | 7.57e-106 | 338 |
| MS.gene02205.t1 | MTR_8g099550 | 39.192 | 495 | 280 | 6 | 23 | 505 | 4 | 489 | 2.72e-104 | 334 |
| MS.gene02205.t1 | MTR_4g098920 | 41.093 | 494 | 272 | 6 | 23 | 505 | 4 | 489 | 9.14e-103 | 330 |
| MS.gene02205.t1 | MTR_8g027675 | 37.854 | 494 | 287 | 6 | 23 | 505 | 4 | 488 | 4.03e-99 | 321 |
| MS.gene02205.t1 | MTR_8g105580 | 39.351 | 493 | 279 | 8 | 21 | 503 | 5 | 487 | 4.69e-97 | 314 |
| MS.gene02205.t1 | MTR_8g105580 | 39.351 | 493 | 279 | 8 | 21 | 503 | 5 | 487 | 1.22e-96 | 314 |
| MS.gene02205.t1 | MTR_8g009510 | 37.903 | 496 | 284 | 5 | 23 | 503 | 7 | 493 | 5.00e-94 | 308 |
| MS.gene02205.t1 | MTR_1g032550 | 37.576 | 495 | 290 | 7 | 21 | 505 | 5 | 490 | 1.16e-92 | 304 |
| MS.gene02205.t1 | MTR_7g451010 | 38.124 | 501 | 280 | 7 | 23 | 505 | 7 | 495 | 1.28e-92 | 304 |
| MS.gene02205.t1 | MTR_8g009510 | 34.264 | 394 | 246 | 4 | 114 | 503 | 2 | 386 | 2.91e-59 | 211 |
| MS.gene02205.t1 | MTR_8g087750 | 37.457 | 291 | 170 | 6 | 39 | 327 | 65 | 345 | 2.32e-41 | 162 |
| MS.gene02205.t1 | MTR_8g087770 | 31.674 | 442 | 281 | 12 | 1 | 433 | 22 | 451 | 2.55e-41 | 162 |
| MS.gene02205.t1 | MTR_4g030140 | 23.347 | 484 | 319 | 16 | 48 | 507 | 42 | 497 | 7.15e-17 | 85.9 |
| MS.gene02205.t1 | MTR_8g463270 | 29.187 | 209 | 129 | 4 | 28 | 225 | 31 | 231 | 3.14e-13 | 73.9 |
| MS.gene02205.t1 | MTR_4g094300 | 27.363 | 201 | 122 | 5 | 40 | 225 | 35 | 226 | 8.08e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02205.t1 | AT4G33650 | 72.432 | 740 | 194 | 4 | 18 | 750 | 32 | 768 | 0.0 | 1108 |
| MS.gene02205.t1 | AT4G33650 | 72.335 | 741 | 194 | 5 | 18 | 750 | 32 | 769 | 0.0 | 1103 |
| MS.gene02205.t1 | AT2G14120 | 71.146 | 759 | 202 | 7 | 2 | 751 | 3 | 753 | 0.0 | 1089 |
| MS.gene02205.t1 | AT2G14120 | 71.014 | 759 | 203 | 7 | 2 | 751 | 3 | 753 | 0.0 | 1087 |
| MS.gene02205.t1 | AT2G14120 | 68.528 | 788 | 202 | 8 | 2 | 751 | 3 | 782 | 0.0 | 1072 |
| MS.gene02205.t1 | AT2G14120 | 71.583 | 739 | 193 | 7 | 2 | 731 | 3 | 733 | 0.0 | 1064 |
| MS.gene02205.t1 | AT5G42080 | 38.384 | 495 | 284 | 6 | 23 | 505 | 4 | 489 | 4.74e-101 | 326 |
| MS.gene02205.t1 | AT5G42080 | 38.384 | 495 | 284 | 6 | 23 | 505 | 4 | 489 | 4.74e-101 | 326 |
| MS.gene02205.t1 | AT5G42080 | 38.742 | 493 | 279 | 7 | 23 | 505 | 4 | 483 | 6.96e-99 | 320 |
| MS.gene02205.t1 | AT5G42080 | 41.355 | 428 | 232 | 5 | 23 | 440 | 4 | 422 | 1.54e-98 | 313 |
| MS.gene02205.t1 | AT3G60190 | 39.113 | 496 | 280 | 7 | 23 | 504 | 7 | 494 | 2.08e-98 | 319 |
| MS.gene02205.t1 | AT3G61760 | 37.576 | 495 | 288 | 7 | 23 | 505 | 4 | 489 | 6.37e-97 | 314 |
| MS.gene02205.t1 | AT3G61760 | 37.576 | 495 | 288 | 7 | 23 | 505 | 4 | 489 | 9.15e-97 | 315 |
| MS.gene02205.t1 | AT1G14830 | 38.618 | 492 | 285 | 6 | 23 | 505 | 7 | 490 | 9.75e-97 | 315 |
| MS.gene02205.t1 | AT2G44590 | 37.980 | 495 | 287 | 6 | 23 | 505 | 4 | 490 | 2.24e-95 | 311 |
| MS.gene02205.t1 | AT3G61760 | 38.865 | 458 | 261 | 6 | 23 | 470 | 4 | 452 | 2.27e-95 | 306 |
| MS.gene02205.t1 | AT2G44590 | 35.758 | 495 | 281 | 7 | 23 | 505 | 4 | 473 | 2.13e-82 | 276 |
| MS.gene02205.t1 | AT2G44590 | 35.758 | 495 | 281 | 7 | 23 | 505 | 4 | 473 | 2.55e-82 | 276 |
| MS.gene02205.t1 | AT1G60500 | 33.264 | 484 | 292 | 15 | 40 | 511 | 60 | 524 | 4.57e-49 | 185 |
| MS.gene02205.t1 | AT1G60530 | 42.636 | 258 | 128 | 8 | 40 | 291 | 57 | 300 | 3.20e-43 | 159 |
| MS.gene02205.t1 | AT1G59610 | 22.385 | 478 | 329 | 13 | 48 | 507 | 41 | 494 | 1.68e-17 | 88.2 |
| MS.gene02205.t1 | AT1G10290 | 23.663 | 486 | 313 | 15 | 48 | 507 | 41 | 494 | 2.24e-17 | 87.8 |
| MS.gene02205.t1 | AT1G53140 | 28.761 | 226 | 135 | 6 | 28 | 236 | 47 | 263 | 2.86e-12 | 71.2 |
Find 205 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTTCCACCAATAAAATT+TGG | 0.138529 | 2.1:+73418261 | None:intergenic |
| AGCTTATCAGCAAGCATTTA+AGG | 0.139781 | 2.1:-73415804 | MS.gene02205:intron |
| AAGGCAAATATCTCGTTTAT+TGG | 0.227476 | 2.1:-73419495 | MS.gene02205:CDS |
| TTAGGCAAGCCAGTTGTTTC+AGG | 0.256267 | 2.1:+73415252 | None:intergenic |
| AATAGTTCTGGAGATTATTA+TGG | 0.257284 | 2.1:-73415192 | MS.gene02205:CDS |
| CAAAGCAATTATGCACTTCT+TGG | 0.269456 | 2.1:-73417273 | MS.gene02205:intron |
| GGGCTGCCTTATCACTTTCT+AGG | 0.299459 | 2.1:-73418200 | MS.gene02205:CDS |
| GATTGTTTCACCAAATGTTC+TGG | 0.301922 | 2.1:-73423345 | MS.gene02205:CDS |
| GAATCTGCATTAGCATAAAA+TGG | 0.303651 | 2.1:+73415111 | None:intergenic |
| CTCTTGTTCTTCAGCTTGTT+CGG | 0.304424 | 2.1:-73426140 | MS.gene02205:CDS |
| TGCAACAGACCAAATCTTCT+AGG | 0.308020 | 2.1:-73418221 | MS.gene02205:CDS |
| TACTTCCACCAATAAAATTT+GGG | 0.332642 | 2.1:+73418262 | None:intergenic |
| CATCTTTGTCAGGAGTTTAG+AGG | 0.336837 | 2.1:-73421291 | MS.gene02205:intron |
| TGCTATGTAGTTGGATATCA+TGG | 0.344789 | 2.1:-73422921 | MS.gene02205:intron |
| CAAGAAGTGCATAATTGCTT+TGG | 0.346835 | 2.1:+73417274 | None:intergenic |
| TAATCCTCAACAGGCTGGTC+AGG | 0.350796 | 2.1:-73421597 | MS.gene02205:intron |
| TGATATTCGTAGGGAAATTC+AGG | 0.351477 | 2.1:-73426049 | MS.gene02205:intron |
| TATATATGATGAATTAATAA+AGG | 0.351813 | 2.1:-73419447 | MS.gene02205:intron |
| CACACCAGCAAATTCAGATT+TGG | 0.358582 | 2.1:-73423192 | MS.gene02205:CDS |
| AAGAAGTGCATAATTGCTTT+GGG | 0.363841 | 2.1:+73417275 | None:intergenic |
| AAACGTATGGATGAAGTTAT+AGG | 0.365773 | 2.1:-73419290 | MS.gene02205:CDS |
| AGATGCCCGTAATCTGTTAC+AGG | 0.377150 | 2.1:-73422888 | MS.gene02205:CDS |
| CTCCCGCAGGTCGCGGTTGT+CGG | 0.379878 | 2.1:-73426252 | MS.gene02205:CDS |
| TTCTATAGGCTGAAACTGAT+AGG | 0.383306 | 2.1:-73423415 | MS.gene02205:intron |
| TCAAATGAACCGGAGTATAA+AGG | 0.383772 | 2.1:-73422570 | MS.gene02205:CDS |
| GGCGAGTTTCTTCATTTGCC+TGG | 0.385663 | 2.1:-73426093 | MS.gene02205:CDS |
| GACGGAAGCTGTCGAAATTA+CGG | 0.390439 | 2.1:-73417360 | MS.gene02205:CDS |
| AATCATATTACGACATTGTC+AGG | 0.390895 | 2.1:-73417319 | MS.gene02205:CDS |
| GGTATAAACAATGCTGATCT+TGG | 0.393333 | 2.1:+73419666 | None:intergenic |
| CGCGACCTGCGGGAGGTTGA+TGG | 0.393446 | 2.1:+73426260 | None:intergenic |
| TAAGGCAGCCCTAGAAGATT+TGG | 0.395563 | 2.1:+73418212 | None:intergenic |
| ATGTATTCAACAAATAGTTC+TGG | 0.398221 | 2.1:-73415204 | MS.gene02205:CDS |
| TTCATTCTTTCCTTCAACCA+TGG | 0.402269 | 2.1:+73421370 | None:intergenic |
| AATGCAGATTCCAATGGAAA+TGG | 0.408726 | 2.1:-73415099 | MS.gene02205:CDS |
| CTATCAGATGGCCTCAAGAT+AGG | 0.411240 | 2.1:+73417392 | None:intergenic |
| ATCCAAGTCTTCAGTGTGCC+AGG | 0.414456 | 2.1:-73419472 | MS.gene02205:CDS |
| GGATGCTCTGGAATCTGAAA+AGG | 0.416095 | 2.1:-73418067 | MS.gene02205:CDS |
| ACGCCGGAACCGAGAGGAAC+GGG | 0.416539 | 2.1:+73426339 | None:intergenic |
| TGATCTCAAATAGGATGCTC+TGG | 0.418143 | 2.1:-73418079 | MS.gene02205:intron |
| AAACATTGGTGGATCAAGTT+GGG | 0.418361 | 2.1:-73417630 | MS.gene02205:CDS |
| TCCACTTCCACGCTATGAAA+TGG | 0.419295 | 2.1:+73417536 | None:intergenic |
| CTAAGCACCCTAAGTCAAAA+AGG | 0.420942 | 2.1:-73415161 | MS.gene02205:CDS |
| TCCATACGTTTCCGTAAGAA+AGG | 0.421284 | 2.1:+73419302 | None:intergenic |
| CCCCTCCGACTTGGCTATGT+TGG | 0.422014 | 2.1:-73422854 | MS.gene02205:CDS |
| CATATCAAAGCTGTGCTACC+TGG | 0.422681 | 2.1:-73421886 | MS.gene02205:CDS |
| GATTGCACATATCATGGAAA+TGG | 0.423913 | 2.1:-73419228 | MS.gene02205:CDS |
| CTTGCAACATCTCTTCAAAC+AGG | 0.424005 | 2.1:+73415876 | None:intergenic |
| ATGTCTACATCTGAGTTATC+TGG | 0.424116 | 2.1:-73421344 | MS.gene02205:CDS |
| ACATGATCATTGTTCTGATC+CGG | 0.426873 | 2.1:+73423252 | None:intergenic |
| AGCGTCATGTCCAGAACATT+TGG | 0.427542 | 2.1:+73423335 | None:intergenic |
| TCCTCTGCTCCCGTTCCTCT+CGG | 0.429771 | 2.1:-73426348 | MS.gene02205:CDS |
| CGCTAGACTTGCCGCTACTC+TGG | 0.434137 | 2.1:+73426226 | None:intergenic |
| AGATATAAACCTCCGTCAAA+TGG | 0.437963 | 2.1:+73417495 | None:intergenic |
| GCTTGTTCGGAGTTCTGAAC+CGG | 0.439537 | 2.1:-73426127 | MS.gene02205:CDS |
| AACTCCTGACAAAGATGGAT+TGG | 0.441503 | 2.1:+73421297 | None:intergenic |
| GCTCCCGTTCCTCTCGGTTC+CGG | 0.442280 | 2.1:-73426342 | MS.gene02205:CDS |
| GAACATGATTGCACATATCA+TGG | 0.443449 | 2.1:-73419234 | MS.gene02205:CDS |
| TTCTTCATTTGCCTGGGAAG+AGG | 0.447824 | 2.1:-73426086 | MS.gene02205:CDS |
| TTTATTGTTGTAGGACTTGG+AGG | 0.448894 | 2.1:-73415319 | MS.gene02205:intron |
| TTCCGACAACCGCGACCTGC+GGG | 0.453475 | 2.1:+73426250 | None:intergenic |
| ACAGGAACCTTCGTAATGCC+TGG | 0.457345 | 2.1:+73423302 | None:intergenic |
| TCATGTTCTCTGATGGTTCA+AGG | 0.460358 | 2.1:+73419249 | None:intergenic |
| TAATGGAGTAGTTGTTGATC+CGG | 0.460812 | 2.1:-73417992 | MS.gene02205:intron |
| GGAGCAGAGGAAGGAGGAGG+AGG | 0.462250 | 2.1:+73426360 | None:intergenic |
| GGCGGATTGGCTTCCGACGC+GGG | 0.463838 | 2.1:+73426281 | None:intergenic |
| TCTGAACCGGCTGATGAATA+CGG | 0.466788 | 2.1:-73426114 | MS.gene02205:CDS |
| TACAGTTTACCTGAAACAAC+TGG | 0.467323 | 2.1:-73415261 | MS.gene02205:CDS |
| TGCAGCGGTTCCCTTTCTTA+CGG | 0.470297 | 2.1:-73419313 | MS.gene02205:CDS |
| TTAGCCAAATCTGAATTTGC+TGG | 0.472104 | 2.1:+73423188 | None:intergenic |
| CTGAAAGAACTGTGAAGTCT+CGG | 0.472735 | 2.1:-73418035 | MS.gene02205:CDS |
| ATTCTTGCAAGACAGGCTAA+TGG | 0.473025 | 2.1:-73418009 | MS.gene02205:CDS |
| GCTCCTTTGCGACAGTAACT+AGG | 0.475671 | 2.1:+73421839 | None:intergenic |
| CCCTTTCTTACGGAAACGTA+TGG | 0.477520 | 2.1:-73419303 | MS.gene02205:CDS |
| ACTAGGATATTCAAATGAAC+CGG | 0.478834 | 2.1:-73422580 | MS.gene02205:intron |
| ACTGCCATACAAAATGCAAC+TGG | 0.478863 | 2.1:-73419690 | MS.gene02205:CDS |
| ACGGGAGCAGAGGAAGGAGG+AGG | 0.482695 | 2.1:+73426357 | None:intergenic |
| GCATTCTCCTCCATGGTTGA+AGG | 0.482755 | 2.1:-73421380 | MS.gene02205:CDS |
| GGACTTGGAGGAGCTGCCTA+TGG | 0.483592 | 2.1:-73415307 | MS.gene02205:CDS |
| GAAACATTGGTGGATCAAGT+TGG | 0.483721 | 2.1:-73417631 | MS.gene02205:CDS |
| GCGGGAGGTTGATGGCGGAT+TGG | 0.486263 | 2.1:+73426268 | None:intergenic |
| CTCTAAACTCCTGACAAAGA+TGG | 0.490780 | 2.1:+73421292 | None:intergenic |
| TCGGGCTATTCTTGCAAGAC+AGG | 0.491847 | 2.1:-73418016 | MS.gene02205:CDS |
| GACATTGTGTAGCTCTCTCT+TGG | 0.492670 | 2.1:+73416035 | None:intergenic |
| ATTCTCTATGATCCATTTGA+CGG | 0.493044 | 2.1:-73417507 | MS.gene02205:CDS |
| AATGGAAAACAATCTGCATC+AGG | 0.494536 | 2.1:-73415081 | MS.gene02205:CDS |
| TAGTTATAGCTTATGTCTCA+AGG | 0.498781 | 2.1:+73415046 | None:intergenic |
| ACCATTTCATAGCGTGGAAG+TGG | 0.500046 | 2.1:-73417537 | MS.gene02205:CDS |
| CATGATCATTGTTCTGATCC+GGG | 0.501371 | 2.1:+73423253 | None:intergenic |
| CATCAACCTCCCGCAGGTCG+CGG | 0.501903 | 2.1:-73426259 | MS.gene02205:CDS |
| ACGATTTCTCTGATATTCGT+AGG | 0.506779 | 2.1:-73426059 | MS.gene02205:CDS |
| ACAGATGAGCCATCGCTGTA+TGG | 0.509428 | 2.1:-73419345 | MS.gene02205:intron |
| GCTGAAACTGATAGGGAAGC+AGG | 0.509875 | 2.1:-73423407 | MS.gene02205:CDS |
| CTTCCGACAACCGCGACCTG+CGG | 0.515750 | 2.1:+73426249 | None:intergenic |
| TAATTCAGATGCTCTTCAAA+TGG | 0.518595 | 2.1:-73423168 | MS.gene02205:CDS |
| TCAGAAGGCTGATCACCAAC+AGG | 0.519822 | 2.1:+73423284 | None:intergenic |
| AGAGGAACGGGAGCAGAGGA+AGG | 0.519952 | 2.1:+73426351 | None:intergenic |
| TGGTGTTGTAAACCGTAGTC+AGG | 0.521243 | 2.1:-73422834 | MS.gene02205:CDS |
| AACCTGGCACACTGAAGACT+TGG | 0.523075 | 2.1:+73419470 | None:intergenic |
| TGCTCTTCAAATGGCAGGAG+TGG | 0.525447 | 2.1:-73423159 | MS.gene02205:CDS |
| CTTCGCACGAGGACTTCAAA+TGG | 0.525711 | 2.1:+73419515 | None:intergenic |
| CGATTTCTCTGATATTCGTA+GGG | 0.525990 | 2.1:-73426058 | MS.gene02205:CDS |
| CTTATATGTGCTCTCAGCCC+AGG | 0.527246 | 2.1:+73421868 | None:intergenic |
| TCAGATGCTCTTCAAATGGC+AGG | 0.529642 | 2.1:-73423164 | MS.gene02205:CDS |
| GCAAAGGAGCATGCAAGCTA+TGG | 0.529760 | 2.1:-73421826 | MS.gene02205:CDS |
| AAAGTTATTCCCCTCCGACT+TGG | 0.530469 | 2.1:-73422863 | MS.gene02205:CDS |
| ACCGAGAGGAACGGGAGCAG+AGG | 0.530647 | 2.1:+73426347 | None:intergenic |
| GATGCTCTGGAATCTGAAAA+GGG | 0.531781 | 2.1:-73418066 | MS.gene02205:CDS |
| TCAAGTGTTTCCGCTTCCAT+AGG | 0.532307 | 2.1:+73415291 | None:intergenic |
| AACTCGCCGTATTCATCAGC+CGG | 0.532434 | 2.1:+73426108 | None:intergenic |
| ACTGGCTTGCCTAAAATTCA+CGG | 0.532648 | 2.1:-73415243 | MS.gene02205:CDS |
| GGAACGGGAGCAGAGGAAGG+AGG | 0.534613 | 2.1:+73426354 | None:intergenic |
| TGTAGCCACCTCCTATCTTG+AGG | 0.534646 | 2.1:-73417403 | MS.gene02205:intron |
| CTTTGGCCTAGAAAGTGATA+AGG | 0.536894 | 2.1:+73418194 | None:intergenic |
| TTCCACCAATAAAATTTGGG+TGG | 0.538529 | 2.1:+73418265 | None:intergenic |
| AGTACAGATTTCATTCCCAC+GGG | 0.540505 | 2.1:+73426170 | None:intergenic |
| ACAACAAGGGTGTCTCAGAC+AGG | 0.542340 | 2.1:-73423382 | MS.gene02205:CDS |
| GCGAGTTTCTTCATTTGCCT+GGG | 0.544868 | 2.1:-73426092 | MS.gene02205:CDS |
| ATATCAAAGCTGTGCTACCT+GGG | 0.545418 | 2.1:-73421885 | MS.gene02205:CDS |
| CTTATCACTTTCTAGGCCAA+AGG | 0.546959 | 2.1:-73418193 | MS.gene02205:intron |
| GACGCCGGAACCGAGAGGAA+CGG | 0.547753 | 2.1:+73426338 | None:intergenic |
| GAGATATTTGCCTTCGCACG+AGG | 0.547806 | 2.1:+73419504 | None:intergenic |
| ATTCTTTCAAAATATTGTGA+AGG | 0.548070 | 2.1:-73421557 | MS.gene02205:intron |
| TGAAAGAACTGTGAAGTCTC+GGG | 0.548653 | 2.1:-73418034 | MS.gene02205:CDS |
| TATGCTAATGCAGATTCCAA+TGG | 0.548763 | 2.1:-73415105 | MS.gene02205:CDS |
| GGAGGAGCTGCCTATGGAAG+CGG | 0.548950 | 2.1:-73415301 | MS.gene02205:CDS |
| TCTATAGGCTGAAACTGATA+GGG | 0.549501 | 2.1:-73423414 | MS.gene02205:intron |
| TCTACATCTGAGTTATCTGG+TGG | 0.552993 | 2.1:-73421341 | MS.gene02205:CDS |
| GGCAGGAGTGGCTGATCCTG+AGG | 0.553058 | 2.1:-73423147 | MS.gene02205:CDS |
| TCCACCAATAAAATTTGGGT+GGG | 0.563887 | 2.1:+73418266 | None:intergenic |
| GCAACAGACCAAATCTTCTA+GGG | 0.564025 | 2.1:-73418220 | MS.gene02205:CDS |
| AGTTATAGCTTATGTCTCAA+GGG | 0.564697 | 2.1:+73415047 | None:intergenic |
| TAATTCATCATATATAAACC+TGG | 0.571444 | 2.1:+73419454 | None:intergenic |
| TGGAGAAATCACCGAGTCCA+AGG | 0.574229 | 2.1:-73421806 | MS.gene02205:intron |
| TTATCATTACCTCCTGACTA+CGG | 0.574954 | 2.1:+73422822 | None:intergenic |
| GAAAACAGCATTCTCCTCCA+TGG | 0.575748 | 2.1:-73421387 | MS.gene02205:intron |
| TACATCTGAGTTATCTGGTG+GGG | 0.576139 | 2.1:-73421339 | MS.gene02205:CDS |
| GTCTCTGAATTACTATCAGA+TGG | 0.576504 | 2.1:+73417380 | None:intergenic |
| ATAGCTTATGTCTCAAGGGT+GGG | 0.577150 | 2.1:+73415051 | None:intergenic |
| CCATACGTTTCCGTAAGAAA+GGG | 0.577273 | 2.1:+73419303 | None:intergenic |
| CTACATCTGAGTTATCTGGT+GGG | 0.581243 | 2.1:-73421340 | MS.gene02205:CDS |
| CACGGCCGACGAGAGCTTCG+AGG | 0.583984 | 2.1:+73426202 | None:intergenic |
| TATAGCTTATGTCTCAAGGG+TGG | 0.585194 | 2.1:+73415050 | None:intergenic |
| TGCTGAACCATTTCATAGCG+TGG | 0.585685 | 2.1:-73417543 | MS.gene02205:CDS |
| CAGGAACCTTCGTAATGCCT+GGG | 0.585825 | 2.1:+73423303 | None:intergenic |
| GAAGCGGAAACACTTGAAAG+AGG | 0.586664 | 2.1:-73415285 | MS.gene02205:CDS |
| TGGCGGATTGGCTTCCGACG+CGG | 0.586924 | 2.1:+73426280 | None:intergenic |
| AAATCGTAGAACCTCTTCCC+AGG | 0.587277 | 2.1:+73426075 | None:intergenic |
| AGGAGGAGGAGGTGATGTAA+CGG | 0.588272 | 2.1:+73426371 | None:intergenic |
| AGCCTTCTGATATTGAAGCC+CGG | 0.588939 | 2.1:-73423271 | MS.gene02205:CDS |
| GATGCAGGTAATAGAACGAT+CGG | 0.589052 | 2.1:-73423046 | MS.gene02205:intron |
| ATCCGCCATCAACCTCCCGC+AGG | 0.592467 | 2.1:-73426265 | MS.gene02205:CDS |
| TCATCAGTCAAGCCTTCACA+TGG | 0.595835 | 2.1:+73419723 | None:intergenic |
| CTCTATGATCCATTTGACGG+AGG | 0.596708 | 2.1:-73417504 | MS.gene02205:intron |
| GATGGCCTCAAGATAGGAGG+TGG | 0.597546 | 2.1:+73417398 | None:intergenic |
| ATCTGATAGTAATTCAGAGA+CGG | 0.597593 | 2.1:-73417378 | MS.gene02205:CDS |
| AATCCTCAACAGGCTGGTCA+GGG | 0.598924 | 2.1:-73421596 | MS.gene02205:intron |
| TGCACATATCATGGAAATGG+AGG | 0.600277 | 2.1:-73419225 | MS.gene02205:intron |
| TGTGACAGCTAGAATAAGAC+AGG | 0.600809 | 2.1:+73423211 | None:intergenic |
| ATCCGGGCTTCAATATCAGA+AGG | 0.602819 | 2.1:+73423269 | None:intergenic |
| TAGGGAAGCAGGAGACAACA+AGG | 0.603636 | 2.1:-73423396 | MS.gene02205:CDS |
| AACATTGGTGGATCAAGTTG+GGG | 0.604755 | 2.1:-73417629 | MS.gene02205:CDS |
| ATGACGCTTGTAGATCTCCC+AGG | 0.605456 | 2.1:-73423320 | MS.gene02205:CDS |
| TGTGCAATCATGTTCTCTGA+TGG | 0.606823 | 2.1:+73419242 | None:intergenic |
| CTGCCATACAAAATGCAACT+GGG | 0.608827 | 2.1:-73419689 | MS.gene02205:CDS |
| CGACAACCGCGACCTGCGGG+AGG | 0.609355 | 2.1:+73426253 | None:intergenic |
| CGAACAAGCTGAAGAACAAG+AGG | 0.610476 | 2.1:+73426141 | None:intergenic |
| GACCTGCGGGAGGTTGATGG+CGG | 0.611523 | 2.1:+73426263 | None:intergenic |
| ATTAACACATGCCTTGGACT+CGG | 0.611737 | 2.1:+73421795 | None:intergenic |
| TAACCTAGTTACTGTCGCAA+AGG | 0.611834 | 2.1:-73421842 | MS.gene02205:CDS |
| CAAGAGCGTCCTTTATACTC+CGG | 0.612482 | 2.1:+73422561 | None:intergenic |
| GAGTACAGATTTCATTCCCA+CGG | 0.613805 | 2.1:+73426169 | None:intergenic |
| GGCATTACGAAGGTTCCTGT+TGG | 0.614859 | 2.1:-73423299 | MS.gene02205:CDS |
| CATTTGAAGTCCTCGTGCGA+AGG | 0.615870 | 2.1:-73419514 | MS.gene02205:CDS |
| AGCGTCCTCGAAGCTCTCGT+CGG | 0.629417 | 2.1:-73426207 | MS.gene02205:CDS |
| TCAGATGGCCTCAAGATAGG+AGG | 0.630399 | 2.1:+73417395 | None:intergenic |
| AGACTTCACAGTTCTTTCAG+AGG | 0.630926 | 2.1:+73418038 | None:intergenic |
| GCAGGAGTGGCTGATCCTGA+GGG | 0.631767 | 2.1:-73423146 | MS.gene02205:intron |
| ATTCTTTCCTTCAACCATGG+AGG | 0.631961 | 2.1:+73421373 | None:intergenic |
| CAACACCAACATAGCCAAGT+CGG | 0.632300 | 2.1:+73422849 | None:intergenic |
| ACCAACATAGCCAAGTCGGA+GGG | 0.633412 | 2.1:+73422853 | None:intergenic |
| CACCAACATAGCCAAGTCGG+AGG | 0.641949 | 2.1:+73422852 | None:intergenic |
| GTTCAGTCACCATACAGCGA+TGG | 0.649619 | 2.1:+73419336 | None:intergenic |
| TGGAGGTGATAAGTCTGCGA+GGG | 0.652552 | 2.1:-73417588 | MS.gene02205:CDS |
| CCAACATAGCCAAGTCGGAG+GGG | 0.659468 | 2.1:+73422854 | None:intergenic |
| AAGGAGGTAGATCCATGTGA+AGG | 0.663582 | 2.1:-73419735 | MS.gene02205:CDS |
| CAAGCTGAAGAACAAGAGGT+CGG | 0.663698 | 2.1:+73426145 | None:intergenic |
| AGAAGTGCATAATTGCTTTG+GGG | 0.664710 | 2.1:+73417276 | None:intergenic |
| GGGAGAAAATGTCTTGAAGA+CGG | 0.664736 | 2.1:+73426301 | None:intergenic |
| AACGATCGGTGTAATCACAA+AGG | 0.668665 | 2.1:-73423032 | MS.gene02205:intron |
| GTATGGTGACTGAACTGCAG+CGG | 0.670138 | 2.1:-73419328 | MS.gene02205:CDS |
| GATGCCCGTAATCTGTTACA+GGG | 0.673379 | 2.1:-73422887 | MS.gene02205:CDS |
| GTTGAATACATTGATGACGT+TGG | 0.675586 | 2.1:+73415216 | None:intergenic |
| AGCGGTCTAGCAGATAGTTG+TGG | 0.676514 | 2.1:-73422397 | MS.gene02205:CDS |
| AGATCTCCCAGGCATTACGA+AGG | 0.678817 | 2.1:-73423309 | MS.gene02205:CDS |
| GTTGTCGGAAGCCAGAGTAG+CGG | 0.679277 | 2.1:-73426237 | MS.gene02205:CDS |
| TGTTATTCACAGGTATACAG+CGG | 0.686184 | 2.1:-73422415 | MS.gene02205:intron |
| TGTTGTAAACCGTAGTCAGG+AGG | 0.686761 | 2.1:-73422831 | MS.gene02205:intron |
| ACAGCTAGAATAAGACAGGA+CGG | 0.692128 | 2.1:+73423215 | None:intergenic |
| GTGGAGGTGATAAGTCTGCG+AGG | 0.707619 | 2.1:-73417589 | MS.gene02205:CDS |
| TAGTTGGATATCATGGACAG+AGG | 0.713407 | 2.1:-73422914 | MS.gene02205:CDS |
| TACAGATTTCATTCCCACGG+GGG | 0.715689 | 2.1:+73426172 | None:intergenic |
| GAGATGACGCCGGAACCGAG+AGG | 0.742737 | 2.1:+73426333 | None:intergenic |
| AGGGAAGCAGGAGACAACAA+GGG | 0.743238 | 2.1:-73423395 | MS.gene02205:CDS |
| GTTAACGAGAGAGATGACGC+CGG | 0.760287 | 2.1:+73426323 | None:intergenic |
| GTACAGATTTCATTCCCACG+GGG | 0.762865 | 2.1:+73426171 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 73415056 | 73426406 | 73415056 | ID=MS.gene02205 |
| chr2.1 | mRNA | 73415056 | 73426406 | 73415056 | ID=MS.gene02205.t1;Parent=MS.gene02205 |
| chr2.1 | exon | 73426050 | 73426406 | 73426050 | ID=MS.gene02205.t1.exon1;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73426050 | 73426406 | 73426050 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73423147 | 73423429 | 73423147 | ID=MS.gene02205.t1.exon2;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73423147 | 73423429 | 73423147 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73423033 | 73423061 | 73423033 | ID=MS.gene02205.t1.exon3;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73423033 | 73423061 | 73423033 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73422832 | 73422933 | 73422832 | ID=MS.gene02205.t1.exon4;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73422832 | 73422933 | 73422832 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73422529 | 73422597 | 73422529 | ID=MS.gene02205.t1.exon5;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73422529 | 73422597 | 73422529 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73422366 | 73422425 | 73422366 | ID=MS.gene02205.t1.exon6;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73422366 | 73422425 | 73422366 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73421807 | 73421920 | 73421807 | ID=MS.gene02205.t1.exon7;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73421807 | 73421920 | 73421807 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73421558 | 73421606 | 73421558 | ID=MS.gene02205.t1.exon8;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73421558 | 73421606 | 73421558 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73421292 | 73421401 | 73421292 | ID=MS.gene02205.t1.exon9;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73421292 | 73421401 | 73421292 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73419662 | 73419754 | 73419662 | ID=MS.gene02205.t1.exon10;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73419662 | 73419754 | 73419662 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73419448 | 73419540 | 73419448 | ID=MS.gene02205.t1.exon11;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73419448 | 73419540 | 73419448 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73419226 | 73419363 | 73419226 | ID=MS.gene02205.t1.exon12;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73419226 | 73419363 | 73419226 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73418194 | 73418307 | 73418194 | ID=MS.gene02205.t1.exon13;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73418194 | 73418307 | 73418194 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73417993 | 73418088 | 73417993 | ID=MS.gene02205.t1.exon14;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73417993 | 73418088 | 73417993 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73417831 | 73417873 | 73417831 | ID=MS.gene02205.t1.exon15;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73417831 | 73417873 | 73417831 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73417505 | 73417653 | 73417505 | ID=MS.gene02205.t1.exon16;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73417505 | 73417653 | 73417505 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73417274 | 73417420 | 73417274 | ID=MS.gene02205.t1.exon17;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73417274 | 73417420 | 73417274 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73416015 | 73416067 | 73416015 | ID=MS.gene02205.t1.exon18;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73416015 | 73416067 | 73416015 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73415805 | 73415904 | 73415805 | ID=MS.gene02205.t1.exon19;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73415805 | 73415904 | 73415805 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| chr2.1 | exon | 73415056 | 73415328 | 73415056 | ID=MS.gene02205.t1.exon20;Parent=MS.gene02205.t1 |
| chr2.1 | CDS | 73415056 | 73415328 | 73415056 | ID=cds.MS.gene02205.t1;Parent=MS.gene02205.t1 |
| Gene Sequence |
| Protein sequence |