Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024458.t1 | XP_003626551.2 | 98.3 | 579 | 10 | 0 | 1 | 579 | 1 | 579 | 0.00E+00 | 1158.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024458.t1 | A0A1J6KGJ9 | 73.7 | 578 | 147 | 2 | 1 | 578 | 4 | 576 | 6.8e-256 | 884.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024458.t1 | G7L419 | 98.3 | 579 | 10 | 0 | 1 | 579 | 1 | 579 | 0.0e+00 | 1158.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045936 | MS.gene024458 | PPI |
| MS.gene024458 | MS.gene073214 | PPI |
| MS.gene78774 | MS.gene024458 | PPI |
| MS.gene024458 | MS.gene046033 | PPI |
| MS.gene25516 | MS.gene024458 | PPI |
| MS.gene024458 | MS.gene99230 | PPI |
| MS.gene024458 | MS.gene34650 | PPI |
| MS.gene024458 | MS.gene95748 | PPI |
| MS.gene024458 | MS.gene053964 | PPI |
| MS.gene36841 | MS.gene024458 | PPI |
| MS.gene064168 | MS.gene024458 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024458.t1 | MTR_7g117110 | 98.273 | 579 | 10 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1182 |
| MS.gene024458.t1 | MTR_8g027920 | 74.266 | 579 | 145 | 1 | 1 | 579 | 1 | 575 | 0.0 | 921 |
| MS.gene024458.t1 | MTR_8g027955 | 73.230 | 579 | 151 | 1 | 1 | 579 | 8 | 582 | 0.0 | 903 |
| MS.gene024458.t1 | MTR_8g027965 | 73.402 | 579 | 150 | 1 | 1 | 579 | 1 | 575 | 0.0 | 901 |
| MS.gene024458.t1 | MTR_8g027970 | 69.603 | 579 | 172 | 1 | 1 | 579 | 1 | 575 | 0.0 | 880 |
| MS.gene024458.t1 | MTR_7g117110 | 98.010 | 402 | 8 | 0 | 1 | 402 | 1 | 402 | 0.0 | 824 |
| MS.gene024458.t1 | MTR_0102s0060 | 48.365 | 581 | 286 | 6 | 11 | 579 | 19 | 597 | 0.0 | 578 |
| MS.gene024458.t1 | MTR_8g037720 | 73.520 | 321 | 63 | 1 | 259 | 579 | 137 | 435 | 6.62e-168 | 484 |
| MS.gene024458.t1 | MTR_8g037720 | 67.133 | 143 | 47 | 0 | 10 | 152 | 1 | 143 | 3.38e-57 | 198 |
| MS.gene024458.t1 | MTR_1g047730 | 79.008 | 262 | 44 | 1 | 318 | 579 | 112 | 362 | 1.56e-146 | 427 |
| MS.gene024458.t1 | MTR_1g047730 | 52.903 | 155 | 28 | 3 | 10 | 163 | 1 | 111 | 2.46e-35 | 136 |
| MS.gene024458.t1 | MTR_5g016320 | 39.759 | 581 | 339 | 6 | 5 | 578 | 15 | 591 | 1.31e-144 | 431 |
| MS.gene024458.t1 | MTR_0035s0150 | 39.192 | 569 | 328 | 8 | 12 | 575 | 21 | 576 | 3.16e-135 | 406 |
| MS.gene024458.t1 | MTR_4g045903 | 36.568 | 577 | 350 | 7 | 9 | 576 | 28 | 597 | 1.67e-129 | 392 |
| MS.gene024458.t1 | MTR_8g467000 | 35.750 | 593 | 359 | 9 | 1 | 575 | 1 | 589 | 6.10e-127 | 385 |
| MS.gene024458.t1 | MTR_2g081860 | 36.082 | 582 | 349 | 8 | 12 | 575 | 15 | 591 | 1.39e-123 | 377 |
| MS.gene024458.t1 | MTR_1g088765 | 36.460 | 565 | 340 | 9 | 7 | 554 | 7 | 569 | 4.34e-117 | 360 |
| MS.gene024458.t1 | MTR_7g094190 | 34.495 | 574 | 340 | 15 | 11 | 561 | 5 | 565 | 1.23e-93 | 298 |
| MS.gene024458.t1 | MTR_1g088765 | 38.140 | 430 | 242 | 9 | 142 | 554 | 3 | 425 | 1.64e-88 | 281 |
| MS.gene024458.t1 | MTR_7g094190 | 34.591 | 477 | 279 | 14 | 105 | 561 | 2 | 465 | 2.00e-73 | 243 |
| MS.gene024458.t1 | MTR_7g094330 | 32.686 | 309 | 169 | 8 | 105 | 408 | 2 | 276 | 5.94e-37 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024458.t1 | AT2G46370 | 63.574 | 582 | 201 | 5 | 1 | 578 | 12 | 586 | 0.0 | 790 |
| MS.gene024458.t1 | AT2G46370 | 63.574 | 582 | 201 | 5 | 1 | 578 | 1 | 575 | 0.0 | 790 |
| MS.gene024458.t1 | AT2G46370 | 63.574 | 582 | 201 | 5 | 1 | 578 | 1 | 575 | 0.0 | 790 |
| MS.gene024458.t1 | AT2G46370 | 65.010 | 503 | 167 | 3 | 78 | 578 | 1 | 496 | 0.0 | 711 |
| MS.gene024458.t1 | AT4G03400 | 50.169 | 590 | 274 | 7 | 7 | 579 | 5 | 591 | 0.0 | 602 |
| MS.gene024458.t1 | AT4G03400 | 50.169 | 590 | 274 | 7 | 7 | 579 | 5 | 591 | 0.0 | 602 |
| MS.gene024458.t1 | AT4G37390 | 38.128 | 577 | 343 | 8 | 12 | 578 | 22 | 594 | 3.05e-136 | 409 |
| MS.gene024458.t1 | AT2G23170 | 37.913 | 575 | 340 | 7 | 12 | 578 | 21 | 586 | 2.60e-135 | 407 |
| MS.gene024458.t1 | AT2G14960 | 38.435 | 575 | 331 | 8 | 12 | 578 | 21 | 580 | 3.44e-133 | 401 |
| MS.gene024458.t1 | AT4G27260 | 37.997 | 579 | 336 | 8 | 12 | 575 | 26 | 596 | 5.88e-131 | 396 |
| MS.gene024458.t1 | AT1G23160 | 38.448 | 580 | 325 | 11 | 12 | 576 | 16 | 578 | 8.80e-131 | 395 |
| MS.gene024458.t1 | AT1G48660 | 37.108 | 574 | 337 | 9 | 14 | 575 | 7 | 568 | 2.77e-130 | 393 |
| MS.gene024458.t1 | AT1G48660 | 36.953 | 571 | 339 | 8 | 14 | 575 | 7 | 565 | 5.04e-130 | 392 |
| MS.gene024458.t1 | AT1G59500 | 38.169 | 579 | 334 | 10 | 12 | 578 | 22 | 588 | 8.27e-130 | 393 |
| MS.gene024458.t1 | AT5G54510 | 36.627 | 587 | 353 | 8 | 3 | 575 | 15 | 596 | 1.24e-127 | 387 |
| MS.gene024458.t1 | AT5G13320 | 36.878 | 583 | 340 | 10 | 8 | 575 | 5 | 574 | 4.42e-125 | 380 |
| MS.gene024458.t1 | AT5G13320 | 36.878 | 583 | 340 | 10 | 8 | 575 | 5 | 574 | 4.42e-125 | 380 |
| MS.gene024458.t1 | AT5G13320 | 36.878 | 583 | 340 | 10 | 8 | 575 | 20 | 589 | 8.37e-125 | 380 |
| MS.gene024458.t1 | AT5G13360 | 36.610 | 590 | 348 | 10 | 1 | 575 | 1 | 579 | 1.94e-120 | 369 |
| MS.gene024458.t1 | AT5G13360 | 36.610 | 590 | 348 | 10 | 1 | 575 | 1 | 579 | 1.94e-120 | 369 |
| MS.gene024458.t1 | AT5G13360 | 36.610 | 590 | 348 | 10 | 1 | 575 | 79 | 657 | 1.56e-119 | 369 |
| MS.gene024458.t1 | AT5G51470 | 36.731 | 569 | 338 | 8 | 11 | 569 | 9 | 565 | 4.31e-119 | 365 |
| MS.gene024458.t1 | AT5G13370 | 36.318 | 592 | 348 | 12 | 1 | 575 | 1 | 580 | 7.60e-119 | 364 |
| MS.gene024458.t1 | AT1G28130 | 36.239 | 585 | 342 | 11 | 17 | 575 | 17 | 596 | 2.62e-118 | 363 |
| MS.gene024458.t1 | AT5G13350 | 35.204 | 588 | 360 | 12 | 1 | 575 | 1 | 580 | 1.80e-116 | 358 |
| MS.gene024458.t1 | AT5G13350 | 35.204 | 588 | 360 | 12 | 1 | 575 | 1 | 580 | 1.80e-116 | 358 |
| MS.gene024458.t1 | AT5G13380 | 35.884 | 588 | 355 | 10 | 1 | 575 | 31 | 609 | 8.24e-116 | 357 |
| MS.gene024458.t1 | AT2G47750 | 36.942 | 582 | 349 | 11 | 5 | 575 | 3 | 577 | 3.05e-115 | 355 |
| MS.gene024458.t1 | AT1G48670 | 31.866 | 568 | 319 | 9 | 16 | 575 | 10 | 517 | 4.66e-96 | 303 |
| MS.gene024458.t1 | AT5G51470 | 36.175 | 481 | 287 | 6 | 98 | 569 | 6 | 475 | 6.91e-96 | 301 |
| MS.gene024458.t1 | AT1G28130 | 36.526 | 449 | 258 | 8 | 150 | 575 | 9 | 453 | 1.88e-89 | 284 |
| MS.gene024458.t1 | AT1G48670 | 35.922 | 412 | 246 | 5 | 172 | 575 | 5 | 406 | 1.58e-87 | 277 |
| MS.gene024458.t1 | AT1G48690 | 35.263 | 190 | 114 | 6 | 14 | 200 | 7 | 190 | 1.29e-21 | 93.2 |
Find 116 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAATGCAAAGTACATTTA+TGG | 0.084381 | 7.2:-1066615 | MS.gene024458:CDS |
| CTATTACCACTATGTCTTTA+AGG | 0.098138 | 7.2:-1067775 | MS.gene024458:intron |
| TCATTCCATGGTATATATTT+TGG | 0.122722 | 7.2:+1067629 | None:intergenic |
| ATTATTAGTAGAAGAGAAAT+TGG | 0.187935 | 7.2:-1064522 | MS.gene024458:CDS |
| GGAAACACTCAAAAGAATTT+TGG | 0.206331 | 7.2:-1067960 | MS.gene024458:CDS |
| GCTGAATATTTGCAGAATTT+TGG | 0.212038 | 7.2:-1067923 | MS.gene024458:CDS |
| AGGTTCTATGGAACCATATT+TGG | 0.217500 | 7.2:-1066583 | MS.gene024458:CDS |
| TGGATTATGTTAGCTAGTTC+TGG | 0.251144 | 7.2:+1066690 | None:intergenic |
| TACGTAGTTCCCTGGTTCTT+TGG | 0.271512 | 7.2:+1064466 | None:intergenic |
| TGGCATTATGACAGGTTCTA+TGG | 0.272655 | 7.2:-1066595 | MS.gene024458:CDS |
| TCAGAGCCTTTGAACAAGTT+TGG | 0.276112 | 7.2:-1066809 | MS.gene024458:CDS |
| TTTCAGGTTTATACAGGTAT+AGG | 0.281287 | 7.2:-1064688 | MS.gene024458:intron |
| CTTGATCATTACCTTGGATT+AGG | 0.281601 | 7.2:-1064278 | MS.gene024458:CDS |
| CCTTAGAACTTCGGGTTGTT+AGG | 0.281656 | 7.2:-1064322 | MS.gene024458:CDS |
| CTTAAAGACATAGTGGTAAT+AGG | 0.285904 | 7.2:+1067776 | None:intergenic |
| CAGGGAACTACGTAATCTTC+TGG | 0.286130 | 7.2:-1064457 | MS.gene024458:CDS |
| TATGCTGTGCTTCCTCAAAT+TGG | 0.286983 | 7.2:-1066447 | MS.gene024458:CDS |
| AGTCCAGATGAAGTGATATT+TGG | 0.291634 | 7.2:-1066939 | MS.gene024458:CDS |
| CCTAACAACCCGAAGTTCTA+AGG | 0.305448 | 7.2:+1064322 | None:intergenic |
| TCAAGAATTCTACAGATAAA+AGG | 0.326689 | 7.2:+1067830 | None:intergenic |
| CAGAGCCTTTGAACAAGTTT+GGG | 0.335203 | 7.2:-1066808 | MS.gene024458:CDS |
| ATGTTAGCTAGTTCTGGATT+TGG | 0.354156 | 7.2:+1066696 | None:intergenic |
| TTTATCTGTAGAATTCTTGA+TGG | 0.355516 | 7.2:-1067827 | MS.gene024458:CDS |
| ACTAAATTTCAGGTTTATAC+AGG | 0.363189 | 7.2:-1064694 | MS.gene024458:intron |
| TATTGGAGCCTTAGAACTTC+GGG | 0.374940 | 7.2:-1064330 | MS.gene024458:CDS |
| GGGGATGTGGTAAAAGTTAT+GGG | 0.377506 | 7.2:-1064662 | MS.gene024458:CDS |
| TCTCGTAAAGTCAACTCTAT+TGG | 0.387723 | 7.2:-1064347 | MS.gene024458:CDS |
| AAGGCTTTAAACTTCATATA+CGG | 0.393788 | 7.2:-1067074 | MS.gene024458:CDS |
| CTACGAATAAACTTTAGTTC+TGG | 0.395325 | 7.2:+1064623 | None:intergenic |
| AGCAAACAGTTCAAAACAAA+AGG | 0.397243 | 7.2:-1067050 | MS.gene024458:CDS |
| CCTTTGTGTACTGCTGACTA+TGG | 0.399568 | 7.2:-1066531 | MS.gene024458:CDS |
| CCATAAATGTACTTTGCATT+GGG | 0.403210 | 7.2:+1066615 | None:intergenic |
| GATGTATAGGATTAAGCAAC+TGG | 0.406579 | 7.2:-1066662 | MS.gene024458:CDS |
| ATAGATGACAATATAATGAT+TGG | 0.410685 | 7.2:+1066904 | None:intergenic |
| GCCATAAATGTACTTTGCAT+TGG | 0.412688 | 7.2:+1066614 | None:intergenic |
| TTCATTGCATGTTTGTAAGA+TGG | 0.414552 | 7.2:+1066984 | None:intergenic |
| ATAATCCACAAAAGATGTAT+AGG | 0.416203 | 7.2:-1066675 | MS.gene024458:CDS |
| ACAGCATAAGTTGCCAATTC+AGG | 0.421103 | 7.2:+1066462 | None:intergenic |
| TTTCCGCGAGGAAGTTCAAT+TGG | 0.426349 | 7.2:-1066868 | MS.gene024458:CDS |
| AGGGGATGTGGTAAAAGTTA+TGG | 0.432684 | 7.2:-1064663 | MS.gene024458:CDS |
| CCGCCAAATATCACTTCATC+TGG | 0.432735 | 7.2:+1066936 | None:intergenic |
| TACATTTATGGCATTATGAC+AGG | 0.440289 | 7.2:-1066603 | MS.gene024458:CDS |
| AAACCACAATGCAGATATAT+CGG | 0.444589 | 7.2:-1067595 | MS.gene024458:CDS |
| AAGATTCTTGATCATTACCT+TGG | 0.449111 | 7.2:-1064284 | MS.gene024458:CDS |
| TTAGTTCTGGAGTTGAGTTA+TGG | 0.454186 | 7.2:+1064636 | None:intergenic |
| ATTGTTATGACCACTCCAAC+AGG | 0.456262 | 7.2:-1066315 | MS.gene024458:intron |
| CTATTGGAGCCTTAGAACTT+CGG | 0.462174 | 7.2:-1064331 | MS.gene024458:CDS |
| AACTCAAAGCAACCAATTTG+AGG | 0.466299 | 7.2:+1066435 | None:intergenic |
| CAGGTATAGGCTAGGGGATG+TGG | 0.467515 | 7.2:-1064675 | MS.gene024458:CDS |
| TGCAGTTCTGGCACTACGCA+AGG | 0.476283 | 7.2:-1067656 | MS.gene024458:intron |
| GAACTTCGGGTTGTTAGGAA+AGG | 0.487975 | 7.2:-1064317 | MS.gene024458:CDS |
| ATCTTACAAACATGCAATGA+AGG | 0.492223 | 7.2:-1066982 | MS.gene024458:CDS |
| GCAAACAGTTCAAAACAAAA+GGG | 0.492256 | 7.2:-1067049 | MS.gene024458:CDS |
| GAGTGAATGCTGCAACTGTT+TGG | 0.498901 | 7.2:-1064402 | MS.gene024458:CDS |
| CCTTTGTGTTAATCCTCAGC+CGG | 0.501458 | 7.2:-1066376 | MS.gene024458:CDS |
| AATTACTAAAGATGCAGAAA+GGG | 0.503049 | 7.2:-1067990 | MS.gene024458:CDS |
| CAGAAGATTACGTAGTTCCC+TGG | 0.503210 | 7.2:+1064458 | None:intergenic |
| GTTTATACAGGTATAGGCTA+GGG | 0.505461 | 7.2:-1064682 | MS.gene024458:CDS |
| TCAGTGAGTCCCACCGGCTG+AGG | 0.514095 | 7.2:+1066363 | None:intergenic |
| TCAAACAATTCATCATTCCA+TGG | 0.514252 | 7.2:+1067617 | None:intergenic |
| CTCTTCCCAAACTTGTTCAA+AGG | 0.517970 | 7.2:+1066803 | None:intergenic |
| AGATGAAGACCTGTTCCTAT+AGG | 0.519223 | 7.2:+1067562 | None:intergenic |
| GACATAGCAGTTCGAATGGA+GGG | 0.520344 | 7.2:+1066732 | None:intergenic |
| AGGGAACTACGTAATCTTCT+GGG | 0.522975 | 7.2:-1064456 | MS.gene024458:CDS |
| CCTGTTCCTATAGGCAAAAG+AGG | 0.524965 | 7.2:+1067571 | None:intergenic |
| TAATCTTCTGGGAAATCAGT+GGG | 0.525589 | 7.2:-1064445 | MS.gene024458:CDS |
| GGTTTATACAGGTATAGGCT+AGG | 0.526104 | 7.2:-1064683 | MS.gene024458:CDS |
| TAATTACTAAAGATGCAGAA+AGG | 0.529649 | 7.2:-1067991 | MS.gene024458:CDS |
| TTGTGTTAATCCTCAGCCGG+TGG | 0.532157 | 7.2:-1066373 | MS.gene024458:CDS |
| CCAGATGAAGTGATATTTGG+CGG | 0.533852 | 7.2:-1066936 | MS.gene024458:CDS |
| GATGCTTCTCCCATTCTCAC+TGG | 0.537832 | 7.2:-1067803 | MS.gene024458:CDS |
| GCTGACTATGGAGCTTCTGA+AGG | 0.543026 | 7.2:-1066519 | MS.gene024458:CDS |
| GTAAAACTGAGGCACTATGC+AGG | 0.551972 | 7.2:-1066561 | MS.gene024458:CDS |
| GGACTCACTGAGGTTAAAGT+TGG | 0.561408 | 7.2:-1066351 | MS.gene024458:CDS |
| TTTAGACATAGCAGTTCGAA+TGG | 0.562118 | 7.2:+1066728 | None:intergenic |
| GAAAGATTTACAGTTAGCCG+TGG | 0.563252 | 7.2:-1064558 | MS.gene024458:CDS |
| AAGTCTTTGTGAGTAGCTAG+TGG | 0.565261 | 7.2:+1067857 | None:intergenic |
| CTTTGTAATGATATAAGAGA+AGG | 0.565767 | 7.2:-1066780 | MS.gene024458:CDS |
| ACTAGCTACTCACAAAGACT+TGG | 0.569122 | 7.2:-1067855 | MS.gene024458:CDS |
| GTTGATTTATCCAAAGAACC+AGG | 0.570837 | 7.2:-1064476 | MS.gene024458:CDS |
| TCATTCTCAAGCTGTGTGAG+AGG | 0.572827 | 7.2:+1066408 | None:intergenic |
| ACAACACCTTAAAGACATAG+TGG | 0.579090 | 7.2:+1067769 | None:intergenic |
| AGATGCAGAAAGGGTTCAGA+GGG | 0.579727 | 7.2:-1067981 | MS.gene024458:CDS |
| TGTGTAGGACCTACACATCT+TGG | 0.580216 | 7.2:+1064230 | None:intergenic |
| TAACAGCTGTTCCTAATCCA+AGG | 0.581897 | 7.2:+1064267 | None:intergenic |
| GGAAGCCAAAATATATACCA+TGG | 0.582732 | 7.2:-1067634 | MS.gene024458:CDS |
| TGTGTTAATCCTCAGCCGGT+GGG | 0.586045 | 7.2:-1066372 | MS.gene024458:CDS |
| TATAAAACACCAAGATGTGT+AGG | 0.586504 | 7.2:-1064239 | MS.gene024458:CDS |
| ACTATGGAGCTTCTGAAGGG+TGG | 0.586810 | 7.2:-1066515 | MS.gene024458:CDS |
| ATAGGATTAAGCAACTGGTA+TGG | 0.589066 | 7.2:-1066657 | MS.gene024458:CDS |
| CAGAACTAAAGTTTATTCGT+AGG | 0.592685 | 7.2:-1064622 | MS.gene024458:CDS |
| TTATATTGTCATCTATTATG+CGG | 0.600773 | 7.2:-1066897 | MS.gene024458:CDS |
| ACAGTTAGCCGTGGAAGCAG+CGG | 0.606164 | 7.2:-1064549 | MS.gene024458:CDS |
| TTAACCTCAGTGAGTCCCAC+CGG | 0.608632 | 7.2:+1066357 | None:intergenic |
| AGACATAGCAGTTCGAATGG+AGG | 0.608831 | 7.2:+1066731 | None:intergenic |
| AGCAGTTCGAATGGAGGGAA+CGG | 0.609463 | 7.2:+1066737 | None:intergenic |
| GCATAAGTTGCCAATTCAGG+TGG | 0.614033 | 7.2:+1066465 | None:intergenic |
| TGAGTACTTACCTGTTGGAG+TGG | 0.617705 | 7.2:+1066305 | None:intergenic |
| GCAGTTCTGGCACTACGCAA+GGG | 0.622048 | 7.2:-1067655 | MS.gene024458:intron |
| GTAATCTTCTGGGAAATCAG+TGG | 0.631300 | 7.2:-1064446 | MS.gene024458:CDS |
| AAGATGCAGAAAGGGTTCAG+AGG | 0.633150 | 7.2:-1067982 | MS.gene024458:CDS |
| CTGACTATGGAGCTTCTGAA+GGG | 0.645246 | 7.2:-1066518 | MS.gene024458:CDS |
| CCATAGTCAGCAGTACACAA+AGG | 0.646601 | 7.2:+1066531 | None:intergenic |
| GGTCCGATATATCTGCATTG+TGG | 0.647561 | 7.2:+1067592 | None:intergenic |
| TTTATACAGGTATAGGCTAG+GGG | 0.649562 | 7.2:-1064681 | MS.gene024458:CDS |
| CAAACAGTTCAAAACAAAAG+GGG | 0.653886 | 7.2:-1067048 | MS.gene024458:CDS |
| TTGATTTATCCAAAGAACCA+GGG | 0.653926 | 7.2:-1064475 | MS.gene024458:CDS |
| GAAAGTGAAAGAGTTTAACA+TGG | 0.667358 | 7.2:-1068038 | MS.gene024458:CDS |
| CCGGCTGAGGATTAACACAA+AGG | 0.670791 | 7.2:+1066376 | None:intergenic |
| AACCATATTTGGTAAAACTG+AGG | 0.675088 | 7.2:-1066572 | MS.gene024458:CDS |
| AAACAGTTCAAAACAAAAGG+GGG | 0.677242 | 7.2:-1067047 | MS.gene024458:CDS |
| GTTCTTTGGATAAATCAACA+TGG | 0.683092 | 7.2:+1064480 | None:intergenic |
| TGCAACACAATGTTGTGTGT+AGG | 0.700702 | 7.2:+1064215 | None:intergenic |
| TCAGCCGGTGGGACTCACTG+AGG | 0.714814 | 7.2:-1066361 | MS.gene024458:CDS |
| AATCTTCTGGGAAATCAGTG+GGG | 0.735072 | 7.2:-1064444 | MS.gene024458:CDS |
| ATACCAATTGAACTTCCTCG+CGG | 0.744188 | 7.2:+1066865 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGAAAAACATAATAATA+AGG | - | chr7.2:1066069-1066088 | MS.gene024458:intron | 10.0% |
| !! | AAAATAGAAGAAAAAAACAT+AGG | + | chr7.2:1065020-1065039 | None:intergenic | 15.0% |
| !! | AATAAAGTAATAGATATTCT+TGG | - | chr7.2:1067326-1067345 | MS.gene024458:intron | 15.0% |
| !! | TATTCTATAGATACTATTTA+TGG | + | chr7.2:1064994-1065013 | None:intergenic | 15.0% |
| !! | TGAATAAAGAACAATAAAAA+TGG | + | chr7.2:1064739-1064758 | None:intergenic | 15.0% |
| !! | TTAATGAATACTATTTGAAT+TGG | + | chr7.2:1067451-1067470 | None:intergenic | 15.0% |
| !!! | AATTTTTCTACTGTATATTT+CGG | - | chr7.2:1066585-1066604 | MS.gene024458:CDS | 15.0% |
| !!! | TGCTATATTTTAATCTTATT+AGG | + | chr7.2:1067059-1067078 | None:intergenic | 15.0% |
| !!! | TTTATTGATTGAAATTCATA+GGG | - | chr7.2:1066135-1066154 | MS.gene024458:intron | 15.0% |
| !!! | TTTTATTGATTGAAATTCAT+AGG | - | chr7.2:1066134-1066153 | MS.gene024458:intron | 15.0% |
| !! | AAAATGAAAAAAGTAACCTA+AGG | + | chr7.2:1066635-1066654 | None:intergenic | 20.0% |
| !! | AACAATAAAAATGGTATACA+AGG | + | chr7.2:1064730-1064749 | None:intergenic | 20.0% |
| !! | ATAGATGACAATATAATGAT+TGG | + | chr7.2:1065308-1065327 | None:intergenic | 20.0% |
| !! | ATTATTAGTAGAAGAGAAAT+TGG | - | chr7.2:1067687-1067706 | MS.gene024458:intron | 20.0% |
| !! | GAAAATATTTATAATGCTTC+TGG | - | chr7.2:1066910-1066929 | MS.gene024458:CDS | 20.0% |
| !! | GAATATAAATTAAATGCTCT+TGG | - | chr7.2:1066607-1066626 | MS.gene024458:CDS | 20.0% |
| !! | TGTTAAAATCGTAATTGAAA+GGG | + | chr7.2:1066886-1066905 | None:intergenic | 20.0% |
| !! | TGTTACATCATTTAACATTA+GGG | + | chr7.2:1066747-1066766 | None:intergenic | 20.0% |
| !! | TTATATTGTCATCTATTATG+CGG | - | chr7.2:1065312-1065331 | MS.gene024458:intron | 20.0% |
| !! | TTGTTAAAATCGTAATTGAA+AGG | + | chr7.2:1066887-1066906 | None:intergenic | 20.0% |
| !! | TTGTTACATCATTTAACATT+AGG | + | chr7.2:1066748-1066767 | None:intergenic | 20.0% |
| !! | TTTAAATCTGTAATGATGTA+TGG | - | chr7.2:1066856-1066875 | MS.gene024458:CDS | 20.0% |
| !!! | CTTTATTTCTGATATTTGTT+GGG | - | chr7.2:1064685-1064704 | MS.gene024458:CDS | 20.0% |
| !!! | TATTTAAACTGCTTTAAATC+TGG | + | chr7.2:1066820-1066839 | None:intergenic | 20.0% |
| !!! | TCTTTATTTCTGATATTTGT+TGG | - | chr7.2:1064684-1064703 | MS.gene024458:CDS | 20.0% |
| !!! | TTATTGATTGAAATTCATAG+GGG | - | chr7.2:1066136-1066155 | MS.gene024458:intron | 20.0% |
| ! | AATGAAGAAAAAAATAGCTG+TGG | + | chr7.2:1066006-1066025 | None:intergenic | 25.0% |
| ! | AATTACTAAAGATGCAGAAA+GGG | - | chr7.2:1064219-1064238 | MS.gene024458:CDS | 25.0% |
| ! | AGAGAGTTTCCTATAAAAAA+TGG | - | chr7.2:1065111-1065130 | MS.gene024458:intron | 25.0% |
| ! | ATAATCCACAAAAGATGTAT+AGG | - | chr7.2:1065534-1065553 | MS.gene024458:intron | 25.0% |
| ! | ATGAATAAACTTGTCTAAGT+TGG | + | chr7.2:1067004-1067023 | None:intergenic | 25.0% |
| ! | CCAAACAAAAGTAAATTAAC+CGG | + | chr7.2:1065938-1065957 | None:intergenic | 25.0% |
| ! | CTTTGTAATGATATAAGAGA+AGG | - | chr7.2:1065429-1065448 | MS.gene024458:intron | 25.0% |
| ! | GAGAGTTTCCTATAAAAAAT+GGG | - | chr7.2:1065112-1065131 | MS.gene024458:intron | 25.0% |
| ! | GTTACATCATTTAACATTAG+GGG | + | chr7.2:1066746-1066765 | None:intergenic | 25.0% |
| ! | TAATTACTAAAGATGCAGAA+AGG | - | chr7.2:1064218-1064237 | MS.gene024458:CDS | 25.0% |
| ! | TATATTGTGCACATTCAATA+CGG | + | chr7.2:1067409-1067428 | None:intergenic | 25.0% |
| ! | TCAAGAATTCTACAGATAAA+AGG | + | chr7.2:1064382-1064401 | None:intergenic | 25.0% |
| ! | TGTTAAATGATGTAACAAAG+TGG | - | chr7.2:1066750-1066769 | MS.gene024458:CDS | 25.0% |
| ! | TTTATCTGTAGAATTCTTGA+TGG | - | chr7.2:1064382-1064401 | MS.gene024458:CDS | 25.0% |
| !! | ATGTATTTTATTATGCTTGG+TGG | - | chr7.2:1066961-1066980 | MS.gene024458:CDS | 25.0% |
| !! | CATCATTACAGATTTAAAAC+TGG | + | chr7.2:1066854-1066873 | None:intergenic | 25.0% |
| !! | CATTTCTCTTTCATTTTGAA+CGG | - | chr7.2:1066385-1066404 | MS.gene024458:CDS | 25.0% |
| !! | TCATTCCATGGTATATATTT+TGG | + | chr7.2:1064583-1064602 | None:intergenic | 25.0% |
| !! | TGGATGTATTTTATTATGCT+TGG | - | chr7.2:1066958-1066977 | MS.gene024458:CDS | 25.0% |
| !! | TTAATCCTATACATCTTTTG+TGG | + | chr7.2:1065542-1065561 | None:intergenic | 25.0% |
| !! | TTATTTAATCGAGCTTTTCT+TGG | - | chr7.2:1067126-1067145 | MS.gene024458:intron | 25.0% |
| !! | TTCAACATACTCTCTTTTAT+TGG | + | chr7.2:1066213-1066232 | None:intergenic | 25.0% |
| !! | TTTTCCGTTGTTTATACAAT+CGG | + | chr7.2:1064814-1064833 | None:intergenic | 25.0% |
| !!! | AAGGCTTTAAACTTCATATA+CGG | - | chr7.2:1065135-1065154 | MS.gene024458:intron | 25.0% |
| !!! | ACTAAATTTCAGGTTTATAC+AGG | - | chr7.2:1067515-1067534 | MS.gene024458:intron | 25.0% |
| AAACAGTTCAAAACAAAAGG+GGG | - | chr7.2:1065162-1065181 | MS.gene024458:intron | 30.0% | |
| AAACCACAATGCAGATATAT+CGG | - | chr7.2:1064614-1064633 | MS.gene024458:CDS | 30.0% | |
| AACCATATTTGGTAAAACTG+AGG | - | chr7.2:1065637-1065656 | MS.gene024458:intron | 30.0% | |
| AACCTGAAATTTAGTCACAA+AGG | + | chr7.2:1067510-1067529 | None:intergenic | 30.0% | |
| AAGATTCTTGATCATTACCT+TGG | - | chr7.2:1067925-1067944 | MS.gene024458:CDS | 30.0% | |
| ACCATAAAACATTTCACAAC+TGG | - | chr7.2:1066562-1066581 | MS.gene024458:CDS | 30.0% | |
| AGCAAACAGTTCAAAACAAA+AGG | - | chr7.2:1065159-1065178 | MS.gene024458:intron | 30.0% | |
| AGCGAAAATTTATGAGTTCA+AGG | + | chr7.2:1064516-1064535 | None:intergenic | 30.0% | |
| ATAAACAACGGAAAATGATG+CGG | - | chr7.2:1064819-1064838 | MS.gene024458:intron | 30.0% | |
| ATAATTGAGTACTTACCTGT+TGG | + | chr7.2:1065912-1065931 | None:intergenic | 30.0% | |
| ATCTTACAAACATGCAATGA+AGG | - | chr7.2:1065227-1065246 | MS.gene024458:intron | 30.0% | |
| ATGTGGGTCACATATATATT+TGG | + | chr7.2:1066167-1066186 | None:intergenic | 30.0% | |
| CAAACAGTTCAAAACAAAAG+GGG | - | chr7.2:1065161-1065180 | MS.gene024458:intron | 30.0% | |
| CAACTGTCAAATGTTATAGT+TGG | - | chr7.2:1064962-1064981 | MS.gene024458:intron | 30.0% | |
| CAGAACTAAAGTTTATTCGT+AGG | - | chr7.2:1067587-1067606 | MS.gene024458:CDS | 30.0% | |
| CCATAAATGTACTTTGCATT+GGG | + | chr7.2:1065597-1065616 | None:intergenic | 30.0% | |
| CTATTACCACTATGTCTTTA+AGG | - | chr7.2:1064434-1064453 | MS.gene024458:CDS | 30.0% | |
| CTTAAAGACATAGTGGTAAT+AGG | + | chr7.2:1064436-1064455 | None:intergenic | 30.0% | |
| GAAAGTGAAAGAGTTTAACA+TGG | - | chr7.2:1064171-1064190 | MS.gene024458:CDS | 30.0% | |
| GCAAACAGTTCAAAACAAAA+GGG | - | chr7.2:1065160-1065179 | MS.gene024458:intron | 30.0% | |
| GTAAGTACTCAATTATTGTC+CGG | - | chr7.2:1065916-1065935 | MS.gene024458:intron | 30.0% | |
| GTTCTTTGGATAAATCAACA+TGG | + | chr7.2:1067732-1067751 | None:intergenic | 30.0% | |
| GTTTCCTATAAAAAATGGGA+AGG | - | chr7.2:1065116-1065135 | MS.gene024458:intron | 30.0% | |
| TACATTTATGGCATTATGAC+AGG | - | chr7.2:1065606-1065625 | MS.gene024458:intron | 30.0% | |
| TATAAAACACCAAGATGTGT+AGG | - | chr7.2:1067970-1067989 | MS.gene024458:CDS | 30.0% | |
| TCAAACAATTCATCATTCCA+TGG | + | chr7.2:1064595-1064614 | None:intergenic | 30.0% | |
| TCAAGGACTAATTAGATGAA+GGG | + | chr7.2:1064499-1064518 | None:intergenic | 30.0% | |
| TTCAAGGACTAATTAGATGA+AGG | + | chr7.2:1064500-1064519 | None:intergenic | 30.0% | |
| TTCATTGCATGTTTGTAAGA+TGG | + | chr7.2:1065228-1065247 | None:intergenic | 30.0% | |
| TTGATTTATCCAAAGAACCA+GGG | - | chr7.2:1067734-1067753 | MS.gene024458:intron | 30.0% | |
| TTTAACATTAGGGGTCAAAA+AGG | + | chr7.2:1066737-1066756 | None:intergenic | 30.0% | |
| ! | CTACGAATAAACTTTAGTTC+TGG | + | chr7.2:1067589-1067608 | None:intergenic | 30.0% |
| ! | GCTGAATATTTGCAGAATTT+TGG | - | chr7.2:1064286-1064305 | MS.gene024458:CDS | 30.0% |
| ! | GGAAACACTCAAAAGAATTT+TGG | - | chr7.2:1064249-1064268 | MS.gene024458:CDS | 30.0% |
| ! | TCCAGTTGTGAAATGTTTTA+TGG | + | chr7.2:1066566-1066585 | None:intergenic | 30.0% |
| !! | CCGGTTAATTTACTTTTGTT+TGG | - | chr7.2:1065935-1065954 | MS.gene024458:intron | 30.0% |
| !! | TATAAAAGTGCCATGAATCA+TGG | + | chr7.2:1067207-1067226 | None:intergenic | 30.0% |
| !! | TTTCAGGTTTATACAGGTAT+AGG | - | chr7.2:1067521-1067540 | MS.gene024458:intron | 30.0% |
| !!! | AAAGCCTTCCCATTTTTTAT+AGG | + | chr7.2:1065123-1065142 | None:intergenic | 30.0% |
| !!! | TGCTATGTCATTTTCAACTT+TGG | - | chr7.2:1067179-1067198 | MS.gene024458:intron | 30.0% |
| AAAAAAATAGCTGTGGTCCT+TGG | + | chr7.2:1065999-1066018 | None:intergenic | 35.0% | |
| AACTCAAAGCAACCAATTTG+AGG | + | chr7.2:1065777-1065796 | None:intergenic | 35.0% | |
| AAGTGGCAAAACAATGTTTG+TGG | + | chr7.2:1066507-1066526 | None:intergenic | 35.0% | |
| ACAACACCTTAAAGACATAG+TGG | + | chr7.2:1064443-1064462 | None:intergenic | 35.0% | |
| AGGTTCTATGGAACCATATT+TGG | - | chr7.2:1065626-1065645 | MS.gene024458:intron | 35.0% | |
| AGTCCAGATGAAGTGATATT+TGG | - | chr7.2:1065270-1065289 | MS.gene024458:intron | 35.0% | |
| ATAGATCACACCAAATCATG+TGG | + | chr7.2:1066184-1066203 | None:intergenic | 35.0% | |
| ATAGGATTAAGCAACTGGTA+TGG | - | chr7.2:1065552-1065571 | MS.gene024458:intron | 35.0% | |
| ATCGGCTACTAAACTATGAT+TGG | + | chr7.2:1064796-1064815 | None:intergenic | 35.0% | |
| ATCTACCTACTCATAGTAAG+TGG | + | chr7.2:1066524-1066543 | None:intergenic | 35.0% | |
| ATGAAACTATGATGTGTCCT+TGG | + | chr7.2:1067280-1067299 | None:intergenic | 35.0% | |
| ATGAATCAGTACTACTACCA+AGG | - | chr7.2:1065979-1065998 | MS.gene024458:intron | 35.0% | |
| CAAGGACTAATTAGATGAAG+GGG | + | chr7.2:1064498-1064517 | None:intergenic | 35.0% | |
| CACCTTTGTGACTAAATTTC+AGG | - | chr7.2:1067505-1067524 | MS.gene024458:intron | 35.0% | |
| CCCAATGCAAAGTACATTTA+TGG | - | chr7.2:1065594-1065613 | MS.gene024458:intron | 35.0% | |
| CTTGATCATTACCTTGGATT+AGG | - | chr7.2:1067931-1067950 | MS.gene024458:CDS | 35.0% | |
| GAGATGCTTGAAGTTTAAGT+AGG | - | chr7.2:1066697-1066716 | MS.gene024458:CDS | 35.0% | |
| GATGTATAGGATTAAGCAAC+TGG | - | chr7.2:1065547-1065566 | MS.gene024458:intron | 35.0% | |
| GATTTACACGTAAGAGAGTA+GGG | + | chr7.2:1066423-1066442 | None:intergenic | 35.0% | |
| GCAAAACAATGTTTGTGGTT+TGG | + | chr7.2:1066502-1066521 | None:intergenic | 35.0% | |
| GCCATAAATGTACTTTGCAT+TGG | + | chr7.2:1065598-1065617 | None:intergenic | 35.0% | |
| GGAAGCCAAAATATATACCA+TGG | - | chr7.2:1064575-1064594 | MS.gene024458:CDS | 35.0% | |
| GTAGATTGTTAGTGCAAGTT+TGG | - | chr7.2:1066538-1066557 | MS.gene024458:CDS | 35.0% | |
| GTAGCCGATTGTATAAACAA+CGG | - | chr7.2:1064807-1064826 | MS.gene024458:intron | 35.0% | |
| GTTTATACAGGTATAGGCTA+GGG | - | chr7.2:1067527-1067546 | MS.gene024458:intron | 35.0% | |
| TAGATCACACCAAATCATGT+GGG | + | chr7.2:1066183-1066202 | None:intergenic | 35.0% | |
| TATATGTGACCCACATGATT+TGG | - | chr7.2:1066171-1066190 | MS.gene024458:intron | 35.0% | |
| TCTCGTAAAGTCAACTCTAT+TGG | - | chr7.2:1067862-1067881 | MS.gene024458:CDS | 35.0% | |
| TGAAAATGACATAGCAGATG+AGG | + | chr7.2:1067175-1067194 | None:intergenic | 35.0% | |
| TGATTTACACGTAAGAGAGT+AGG | + | chr7.2:1066424-1066443 | None:intergenic | 35.0% | |
| TGGATTATGTTAGCTAGTTC+TGG | + | chr7.2:1065522-1065541 | None:intergenic | 35.0% | |
| TGTTGATATAACCTATGCCA+AGG | - | chr7.2:1067260-1067279 | MS.gene024458:intron | 35.0% | |
| TTTAGACATAGCAGTTCGAA+TGG | + | chr7.2:1065484-1065503 | None:intergenic | 35.0% | |
| TTTATACAGGTATAGGCTAG+GGG | - | chr7.2:1067528-1067547 | MS.gene024458:intron | 35.0% | |
| ! | AACTTTGGTTCCATGATTCA+TGG | - | chr7.2:1067194-1067213 | MS.gene024458:intron | 35.0% |
| ! | AATAGGTTTTCCAGTGAGAA+TGG | + | chr7.2:1064419-1064438 | None:intergenic | 35.0% |
| ! | ACTTGTGTTAAAGAGTGTGT+TGG | + | chr7.2:1066098-1066117 | None:intergenic | 35.0% |
| ! | ATAGGTTTTCCAGTGAGAAT+GGG | + | chr7.2:1064418-1064437 | None:intergenic | 35.0% |
| ! | CCAATTCAGGTGGAATTTTT+GGG | + | chr7.2:1065737-1065756 | None:intergenic | 35.0% |
| ! | CCTTTTTGCTAATTGGAGTT+GGG | - | chr7.2:1065065-1065084 | MS.gene024458:intron | 35.0% |
| ! | GATTTTCAGCAAAGTCTCAT+TGG | - | chr7.2:1067364-1067383 | MS.gene024458:intron | 35.0% |
| ! | GCTTTTCTTGGAGTTGAAAT+TGG | - | chr7.2:1067138-1067157 | MS.gene024458:intron | 35.0% |
| ! | GTTGATTTATCCAAAGAACC+AGG | - | chr7.2:1067733-1067752 | MS.gene024458:intron | 35.0% |
| ! | TAATCTTCTGGGAAATCAGT+GGG | - | chr7.2:1067764-1067783 | MS.gene024458:intron | 35.0% |
| ! | TACCATGCCTTTTTGCTAAT+TGG | - | chr7.2:1065058-1065077 | MS.gene024458:intron | 35.0% |
| ! | TGCCTCAGTTTTACCAAATA+TGG | + | chr7.2:1065642-1065661 | None:intergenic | 35.0% |
| !! | ATGTTAGCTAGTTCTGGATT+TGG | + | chr7.2:1065516-1065535 | None:intergenic | 35.0% |
| !! | TTAGTTCTGGAGTTGAGTTA+TGG | + | chr7.2:1067576-1067595 | None:intergenic | 35.0% |
| !! | TTTTGCCACTTACTATGAGT+AGG | - | chr7.2:1066516-1066535 | MS.gene024458:CDS | 35.0% |
| !!! | TTGCAGAATTTTGGTCTTGA+TGG | - | chr7.2:1064295-1064314 | MS.gene024458:CDS | 35.0% |
| AAGTCTTTGTGAGTAGCTAG+TGG | + | chr7.2:1064355-1064374 | None:intergenic | 40.0% | |
| ACAGCATAAGTTGCCAATTC+AGG | + | chr7.2:1065750-1065769 | None:intergenic | 40.0% | |
| ACTAGCTACTCACAAAGACT+TGG | - | chr7.2:1064354-1064373 | MS.gene024458:CDS | 40.0% | |
| AGATGAAGACCTGTTCCTAT+AGG | + | chr7.2:1064650-1064669 | None:intergenic | 40.0% | |
| AGGGAACTACGTAATCTTCT+GGG | - | chr7.2:1067753-1067772 | MS.gene024458:intron | 40.0% | |
| AGGGGATGTGGTAAAAGTTA+TGG | - | chr7.2:1067546-1067565 | MS.gene024458:intron | 40.0% | |
| ATACCAATTGAACTTCCTCG+CGG | + | chr7.2:1065347-1065366 | None:intergenic | 40.0% | |
| ATAGGAAACTCTCTGCAGAA+AGG | + | chr7.2:1065105-1065124 | None:intergenic | 40.0% | |
| ATTGTTATGACCACTCCAAC+AGG | - | chr7.2:1065894-1065913 | MS.gene024458:intron | 40.0% | |
| CAGAGCCTTTGAACAAGTTT+GGG | - | chr7.2:1065401-1065420 | MS.gene024458:intron | 40.0% | |
| CCAGATGAAGTGATATTTGG+CGG | - | chr7.2:1065273-1065292 | MS.gene024458:intron | 40.0% | |
| CCCAAAAATTCCACCTGAAT+TGG | - | chr7.2:1065734-1065753 | MS.gene024458:intron | 40.0% | |
| CCCAACTCCAATTAGCAAAA+AGG | + | chr7.2:1065068-1065087 | None:intergenic | 40.0% | |
| CTATTGGAGCCTTAGAACTT+CGG | - | chr7.2:1067878-1067897 | MS.gene024458:CDS | 40.0% | |
| CTCCAATTAGCAAAAAGGCA+TGG | + | chr7.2:1065063-1065082 | None:intergenic | 40.0% | |
| GAAAGATTTACAGTTAGCCG+TGG | - | chr7.2:1067651-1067670 | MS.gene024458:CDS | 40.0% | |
| GGCGCATAGTATAAAACTGT+GGG | - | chr7.2:1066291-1066310 | MS.gene024458:intron | 40.0% | |
| GGGGATGTGGTAAAAGTTAT+GGG | - | chr7.2:1067547-1067566 | MS.gene024458:intron | 40.0% | |
| GGTTTATACAGGTATAGGCT+AGG | - | chr7.2:1067526-1067545 | MS.gene024458:intron | 40.0% | |
| TAACAGCTGTTCCTAATCCA+AGG | + | chr7.2:1067945-1067964 | None:intergenic | 40.0% | |
| TATGACACGTGCTTACTTTG+TGG | - | chr7.2:1066938-1066957 | MS.gene024458:CDS | 40.0% | |
| TATGCTGTGCTTCCTCAAAT+TGG | - | chr7.2:1065762-1065781 | MS.gene024458:intron | 40.0% | |
| TATTGGAGCCTTAGAACTTC+GGG | - | chr7.2:1067879-1067898 | MS.gene024458:CDS | 40.0% | |
| TCAGAGCCTTTGAACAAGTT+TGG | - | chr7.2:1065400-1065419 | MS.gene024458:intron | 40.0% | |
| TGCAACACAATGTTGTGTGT+AGG | + | chr7.2:1067997-1068016 | None:intergenic | 40.0% | |
| TGGCATTATGACAGGTTCTA+TGG | - | chr7.2:1065614-1065633 | MS.gene024458:intron | 40.0% | |
| TGGCGCATAGTATAAAACTG+TGG | - | chr7.2:1066290-1066309 | MS.gene024458:intron | 40.0% | |
| TGTTCATCAGTCATGCTATG+TGG | + | chr7.2:1064908-1064927 | None:intergenic | 40.0% | |
| TTAAATGCTCTTGGCACCTT+AGG | - | chr7.2:1066616-1066635 | MS.gene024458:CDS | 40.0% | |
| TTTGCATTGGGAAAAAGCTC+TGG | + | chr7.2:1065585-1065604 | None:intergenic | 40.0% | |
| ! | AATCTTCTGGGAAATCAGTG+GGG | - | chr7.2:1067765-1067784 | MS.gene024458:intron | 40.0% |
| ! | CTCTTCCCAAACTTGTTCAA+AGG | + | chr7.2:1065409-1065428 | None:intergenic | 40.0% |
| ! | GCCAATTCAGGTGGAATTTT+TGG | + | chr7.2:1065738-1065757 | None:intergenic | 40.0% |
| ! | GCCTTTTTGCTAATTGGAGT+TGG | - | chr7.2:1065064-1065083 | MS.gene024458:intron | 40.0% |
| ! | GTAATCTTCTGGGAAATCAG+TGG | - | chr7.2:1067763-1067782 | MS.gene024458:intron | 40.0% |
| ! | TACGAATGTTACTTGCACTG+TGG | - | chr7.2:1066270-1066289 | MS.gene024458:intron | 40.0% |
| ! | TGTGTTAAAGAGTGTGTTGG+TGG | + | chr7.2:1066095-1066114 | None:intergenic | 40.0% |
| ! | TTGGTGGTTTGACCATCTTT+GGG | - | chr7.2:1066977-1066996 | MS.gene024458:CDS | 40.0% |
| !! | TCTCTTAACTGTGCTACTTC+AGG | + | chr7.2:1066777-1066796 | None:intergenic | 40.0% |
| AAGATGCAGAAAGGGTTCAG+AGG | - | chr7.2:1064227-1064246 | MS.gene024458:CDS | 45.0% | |
| AGACATAGCAGTTCGAATGG+AGG | + | chr7.2:1065481-1065500 | None:intergenic | 45.0% | |
| AGATGCAGAAAGGGTTCAGA+GGG | - | chr7.2:1064228-1064247 | MS.gene024458:CDS | 45.0% | |
| CAGAAGATTACGTAGTTCCC+TGG | + | chr7.2:1067754-1067773 | None:intergenic | 45.0% | |
| CAGGGAACTACGTAATCTTC+TGG | - | chr7.2:1067752-1067771 | MS.gene024458:intron | 45.0% | |
| CCATAGTCAGCAGTACACAA+AGG | + | chr7.2:1065681-1065700 | None:intergenic | 45.0% | |
| CCGCCAAATATCACTTCATC+TGG | + | chr7.2:1065276-1065295 | None:intergenic | 45.0% | |
| CCTAACAACCCGAAGTTCTA+AGG | + | chr7.2:1067890-1067909 | None:intergenic | 45.0% | |
| CCTGTTCCTATAGGCAAAAG+AGG | + | chr7.2:1064641-1064660 | None:intergenic | 45.0% | |
| CCTTTGTGTTAATCCTCAGC+CGG | - | chr7.2:1065833-1065852 | MS.gene024458:intron | 45.0% | |
| CTATGATGTGTCCTTGGCAT+AGG | + | chr7.2:1067274-1067293 | None:intergenic | 45.0% | |
| CTGACTATGGAGCTTCTGAA+GGG | - | chr7.2:1065691-1065710 | MS.gene024458:intron | 45.0% | |
| GACATAGCAGTTCGAATGGA+GGG | + | chr7.2:1065480-1065499 | None:intergenic | 45.0% | |
| GAGTGAATGCTGCAACTGTT+TGG | - | chr7.2:1067807-1067826 | MS.gene024458:CDS | 45.0% | |
| GCATAAGTTGCCAATTCAGG+TGG | + | chr7.2:1065747-1065766 | None:intergenic | 45.0% | |
| GGACTCACTGAGGTTAAAGT+TGG | - | chr7.2:1065858-1065877 | MS.gene024458:intron | 45.0% | |
| GGTCCGATATATCTGCATTG+TGG | + | chr7.2:1064620-1064639 | None:intergenic | 45.0% | |
| TCATACTGCGAATGTGATGC+TGG | - | chr7.2:1066025-1066044 | MS.gene024458:intron | 45.0% | |
| TCATTCTCAAGCTGTGTGAG+AGG | + | chr7.2:1065804-1065823 | None:intergenic | 45.0% | |
| TGACATAGCAGATGAGGTCA+AGG | + | chr7.2:1067169-1067188 | None:intergenic | 45.0% | |
| TGAGTACTTACCTGTTGGAG+TGG | + | chr7.2:1065907-1065926 | None:intergenic | 45.0% | |
| TGTGTAGGACCTACACATCT+TGG | + | chr7.2:1067982-1068001 | None:intergenic | 45.0% | |
| TTTCCGCGAGGAAGTTCAAT+TGG | - | chr7.2:1065341-1065360 | MS.gene024458:intron | 45.0% | |
| ! | ATCGGACCTCTTTTGCCTAT+AGG | - | chr7.2:1064632-1064651 | MS.gene024458:CDS | 45.0% |
| ! | CCTCTTTTGCCTATAGGAAC+AGG | - | chr7.2:1064638-1064657 | MS.gene024458:CDS | 45.0% |
| ! | CCTTTGTGTACTGCTGACTA+TGG | - | chr7.2:1065678-1065697 | MS.gene024458:intron | 45.0% |
| ! | CTTGGTGGTTTGACCATCTT+TGG | - | chr7.2:1066976-1066995 | MS.gene024458:CDS | 45.0% |
| ! | GACAAGTCTTTTGTCGATGC+AGG | - | chr7.2:1067829-1067848 | MS.gene024458:CDS | 45.0% |
| ! | GTAAAACTGAGGCACTATGC+AGG | - | chr7.2:1065648-1065667 | MS.gene024458:intron | 45.0% |
| ! | TAATTTTGCCGCTGCTTCCA+CGG | + | chr7.2:1067671-1067690 | None:intergenic | 45.0% |
| ! | TACGTAGTTCCCTGGTTCTT+TGG | + | chr7.2:1067746-1067765 | None:intergenic | 45.0% |
| !! | CCTTAGAACTTCGGGTTGTT+AGG | - | chr7.2:1067887-1067906 | MS.gene024458:CDS | 45.0% |
| !! | GAACTTCGGGTTGTTAGGAA+AGG | - | chr7.2:1067892-1067911 | MS.gene024458:CDS | 45.0% |
| !! | GTCTAAGTTGGTCCCAAAGA+TGG | + | chr7.2:1066992-1067011 | None:intergenic | 45.0% |
| AGCAGTTCGAATGGAGGGAA+CGG | + | chr7.2:1065475-1065494 | None:intergenic | 50.0% | |
| CCGGCTGAGGATTAACACAA+AGG | + | chr7.2:1065836-1065855 | None:intergenic | 50.0% | |
| GAACCGTACTCTTGCAGTTC+TGG | - | chr7.2:1064541-1064560 | MS.gene024458:CDS | 50.0% | |
| GATGCTTCTCCCATTCTCAC+TGG | - | chr7.2:1064406-1064425 | MS.gene024458:CDS | 50.0% | |
| GCTGACTATGGAGCTTCTGA+AGG | - | chr7.2:1065690-1065709 | MS.gene024458:intron | 50.0% | |
| GTGCCAGAACTGCAAGAGTA+CGG | + | chr7.2:1064547-1064566 | None:intergenic | 50.0% | |
| TACTGCGAATGTGATGCTGG+CGG | - | chr7.2:1066028-1066047 | MS.gene024458:intron | 50.0% | |
| TCCATTTGCTTCCCTAGACC+CGG | - | chr7.2:1066464-1066483 | MS.gene024458:CDS | 50.0% | |
| TGTGTTAATCCTCAGCCGGT+GGG | - | chr7.2:1065837-1065856 | MS.gene024458:intron | 50.0% | |
| TTAACCTCAGTGAGTCCCAC+CGG | + | chr7.2:1065855-1065874 | None:intergenic | 50.0% | |
| TTGTGTTAATCCTCAGCCGG+TGG | - | chr7.2:1065836-1065855 | MS.gene024458:intron | 50.0% | |
| ! | ACTATGGAGCTTCTGAAGGG+TGG | - | chr7.2:1065694-1065713 | MS.gene024458:intron | 50.0% |
| !! | ATGCGGACTAATTTTCCGCG+AGG | - | chr7.2:1065329-1065348 | MS.gene024458:intron | 50.0% |
| ACAGTTAGCCGTGGAAGCAG+CGG | - | chr7.2:1067660-1067679 | MS.gene024458:intron | 55.0% | |
| ACCGGGTCTAGGGAAGCAAA+TGG | + | chr7.2:1066468-1066487 | None:intergenic | 55.0% | |
| ACTGCGAATGTGATGCTGGC+GGG | - | chr7.2:1066029-1066048 | MS.gene024458:intron | 55.0% | |
| ATTTGCTTCCCTAGACCCGG+TGG | - | chr7.2:1066467-1066486 | MS.gene024458:CDS | 55.0% | |
| CAGGTATAGGCTAGGGGATG+TGG | - | chr7.2:1067534-1067553 | MS.gene024458:intron | 55.0% | |
| TCCATTGACCACCGGGTCTA+GGG | + | chr7.2:1066478-1066497 | None:intergenic | 55.0% | |
| ! | GCAGTTCTGGCACTACGCAA+GGG | - | chr7.2:1064554-1064573 | MS.gene024458:CDS | 55.0% |
| ! | GGTTTGGCTCCATTGACCAC+CGG | + | chr7.2:1066486-1066505 | None:intergenic | 55.0% |
| ! | GTTTGGCTCCATTGACCACC+GGG | + | chr7.2:1066485-1066504 | None:intergenic | 55.0% |
| ! | TGCAGTTCTGGCACTACGCA+AGG | - | chr7.2:1064553-1064572 | MS.gene024458:CDS | 55.0% |
| CTCCATTGACCACCGGGTCT+AGG | + | chr7.2:1066479-1066498 | None:intergenic | 60.0% | |
| TCCCTAGACCCGGTGGTCAA+TGG | - | chr7.2:1066474-1066493 | MS.gene024458:CDS | 60.0% | |
| TCAGCCGGTGGGACTCACTG+AGG | - | chr7.2:1065848-1065867 | MS.gene024458:intron | 65.0% | |
| ! | TCAGTGAGTCCCACCGGCTG+AGG | + | chr7.2:1065849-1065868 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 1064163 | 1068068 | 1064163 | ID=MS.gene024458 |
| chr7.2 | mRNA | 1064163 | 1068068 | 1064163 | ID=MS.gene024458.t1;Parent=MS.gene024458 |
| chr7.2 | exon | 1067776 | 1068068 | 1067776 | ID=MS.gene024458.t1.exon1;Parent=MS.gene024458.t1 |
| chr7.2 | CDS | 1067776 | 1068068 | 1067776 | ID=cds.MS.gene024458.t1;Parent=MS.gene024458.t1 |
| chr7.2 | exon | 1067572 | 1067673 | 1067572 | ID=MS.gene024458.t1.exon2;Parent=MS.gene024458.t1 |
| chr7.2 | CDS | 1067572 | 1067673 | 1067572 | ID=cds.MS.gene024458.t1;Parent=MS.gene024458.t1 |
| chr7.2 | exon | 1066316 | 1067118 | 1066316 | ID=MS.gene024458.t1.exon3;Parent=MS.gene024458.t1 |
| chr7.2 | CDS | 1066316 | 1067118 | 1066316 | ID=cds.MS.gene024458.t1;Parent=MS.gene024458.t1 |
| chr7.2 | exon | 1064163 | 1064704 | 1064163 | ID=MS.gene024458.t1.exon4;Parent=MS.gene024458.t1 |
| chr7.2 | CDS | 1064163 | 1064704 | 1064163 | ID=cds.MS.gene024458.t1;Parent=MS.gene024458.t1 |
| Gene Sequence |
| Protein sequence |
