Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025922.t1 | XP_003626551.2 | 98.4 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.00E+00 | 1161.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025922.t1 | A0A1J6KGJ9 | 73.9 | 578 | 146 | 2 | 1 | 578 | 4 | 576 | 8.1e-257 | 887.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025922.t1 | G7L419 | 98.4 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0e+00 | 1161.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene95748 | MS.gene025922 | PPI |
| MS.gene073214 | MS.gene025922 | PPI |
| MS.gene25516 | MS.gene025922 | PPI |
| MS.gene053964 | MS.gene025922 | PPI |
| MS.gene36841 | MS.gene025922 | PPI |
| MS.gene045936 | MS.gene025922 | PPI |
| MS.gene025922 | MS.gene046033 | PPI |
| MS.gene025922 | MS.gene99230 | PPI |
| MS.gene025922 | MS.gene34650 | PPI |
| MS.gene78774 | MS.gene025922 | PPI |
| MS.gene064168 | MS.gene025922 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025922.t1 | MTR_7g117110 | 98.446 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1186 |
| MS.gene025922.t1 | MTR_8g027920 | 74.439 | 579 | 144 | 1 | 1 | 579 | 1 | 575 | 0.0 | 924 |
| MS.gene025922.t1 | MTR_8g027955 | 73.402 | 579 | 150 | 1 | 1 | 579 | 8 | 582 | 0.0 | 905 |
| MS.gene025922.t1 | MTR_8g027965 | 73.575 | 579 | 149 | 1 | 1 | 579 | 1 | 575 | 0.0 | 904 |
| MS.gene025922.t1 | MTR_8g027970 | 69.775 | 579 | 171 | 1 | 1 | 579 | 1 | 575 | 0.0 | 884 |
| MS.gene025922.t1 | MTR_7g117110 | 98.259 | 402 | 7 | 0 | 1 | 402 | 1 | 402 | 0.0 | 827 |
| MS.gene025922.t1 | MTR_0102s0060 | 48.537 | 581 | 285 | 6 | 11 | 579 | 19 | 597 | 0.0 | 582 |
| MS.gene025922.t1 | MTR_8g037720 | 73.832 | 321 | 62 | 1 | 259 | 579 | 137 | 435 | 3.66e-169 | 488 |
| MS.gene025922.t1 | MTR_8g037720 | 67.133 | 143 | 47 | 0 | 10 | 152 | 1 | 143 | 3.45e-57 | 198 |
| MS.gene025922.t1 | MTR_1g047730 | 79.389 | 262 | 43 | 1 | 318 | 579 | 112 | 362 | 8.56e-148 | 430 |
| MS.gene025922.t1 | MTR_1g047730 | 52.903 | 155 | 28 | 3 | 10 | 163 | 1 | 111 | 2.53e-35 | 136 |
| MS.gene025922.t1 | MTR_5g016320 | 39.931 | 581 | 338 | 6 | 5 | 578 | 15 | 591 | 7.95e-146 | 434 |
| MS.gene025922.t1 | MTR_0035s0150 | 39.367 | 569 | 327 | 8 | 12 | 575 | 21 | 576 | 1.73e-136 | 409 |
| MS.gene025922.t1 | MTR_4g045903 | 36.742 | 577 | 349 | 7 | 9 | 576 | 28 | 597 | 8.47e-131 | 395 |
| MS.gene025922.t1 | MTR_8g467000 | 35.919 | 593 | 358 | 9 | 1 | 575 | 1 | 589 | 3.06e-128 | 389 |
| MS.gene025922.t1 | MTR_2g081860 | 36.254 | 582 | 348 | 8 | 12 | 575 | 15 | 591 | 7.61e-125 | 380 |
| MS.gene025922.t1 | MTR_1g088765 | 36.972 | 568 | 333 | 10 | 7 | 554 | 7 | 569 | 1.29e-118 | 364 |
| MS.gene025922.t1 | MTR_7g094190 | 34.669 | 574 | 339 | 15 | 11 | 561 | 5 | 565 | 5.42e-95 | 302 |
| MS.gene025922.t1 | MTR_1g088765 | 38.372 | 430 | 241 | 9 | 142 | 554 | 3 | 425 | 5.23e-90 | 285 |
| MS.gene025922.t1 | MTR_7g094190 | 34.801 | 477 | 278 | 14 | 105 | 561 | 2 | 465 | 1.13e-74 | 246 |
| MS.gene025922.t1 | MTR_7g094330 | 33.010 | 309 | 168 | 8 | 105 | 408 | 2 | 276 | 3.07e-38 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025922.t1 | AT2G46370 | 63.746 | 582 | 200 | 5 | 1 | 578 | 12 | 586 | 0.0 | 793 |
| MS.gene025922.t1 | AT2G46370 | 63.746 | 582 | 200 | 5 | 1 | 578 | 1 | 575 | 0.0 | 793 |
| MS.gene025922.t1 | AT2G46370 | 63.746 | 582 | 200 | 5 | 1 | 578 | 1 | 575 | 0.0 | 793 |
| MS.gene025922.t1 | AT2G46370 | 65.209 | 503 | 166 | 3 | 78 | 578 | 1 | 496 | 0.0 | 715 |
| MS.gene025922.t1 | AT4G03400 | 50.339 | 590 | 273 | 7 | 7 | 579 | 5 | 591 | 0.0 | 606 |
| MS.gene025922.t1 | AT4G03400 | 50.339 | 590 | 273 | 7 | 7 | 579 | 5 | 591 | 0.0 | 606 |
| MS.gene025922.t1 | AT4G37390 | 38.302 | 577 | 342 | 8 | 12 | 578 | 22 | 594 | 1.83e-137 | 412 |
| MS.gene025922.t1 | AT2G23170 | 38.087 | 575 | 339 | 7 | 12 | 578 | 21 | 586 | 1.48e-136 | 410 |
| MS.gene025922.t1 | AT2G14960 | 38.609 | 575 | 330 | 8 | 12 | 578 | 21 | 580 | 1.66e-134 | 404 |
| MS.gene025922.t1 | AT4G27260 | 38.169 | 579 | 335 | 8 | 12 | 575 | 26 | 596 | 2.53e-132 | 400 |
| MS.gene025922.t1 | AT1G23160 | 38.621 | 580 | 324 | 11 | 12 | 576 | 16 | 578 | 4.16e-132 | 398 |
| MS.gene025922.t1 | AT1G48660 | 37.282 | 574 | 336 | 9 | 14 | 575 | 7 | 568 | 1.34e-131 | 397 |
| MS.gene025922.t1 | AT1G48660 | 37.128 | 571 | 338 | 8 | 14 | 575 | 7 | 565 | 2.36e-131 | 396 |
| MS.gene025922.t1 | AT1G59500 | 38.342 | 579 | 333 | 10 | 12 | 578 | 22 | 588 | 4.23e-131 | 396 |
| MS.gene025922.t1 | AT5G54510 | 36.797 | 587 | 352 | 8 | 3 | 575 | 15 | 596 | 5.89e-129 | 391 |
| MS.gene025922.t1 | AT5G13320 | 37.050 | 583 | 339 | 10 | 8 | 575 | 5 | 574 | 2.01e-126 | 383 |
| MS.gene025922.t1 | AT5G13320 | 37.050 | 583 | 339 | 10 | 8 | 575 | 5 | 574 | 2.01e-126 | 383 |
| MS.gene025922.t1 | AT5G13320 | 37.050 | 583 | 339 | 10 | 8 | 575 | 20 | 589 | 3.32e-126 | 383 |
| MS.gene025922.t1 | AT5G13360 | 36.780 | 590 | 347 | 10 | 1 | 575 | 1 | 579 | 8.15e-122 | 372 |
| MS.gene025922.t1 | AT5G13360 | 36.780 | 590 | 347 | 10 | 1 | 575 | 1 | 579 | 8.15e-122 | 372 |
| MS.gene025922.t1 | AT5G13360 | 36.780 | 590 | 347 | 10 | 1 | 575 | 79 | 657 | 6.04e-121 | 372 |
| MS.gene025922.t1 | AT5G51470 | 36.907 | 569 | 337 | 8 | 11 | 569 | 9 | 565 | 2.64e-120 | 368 |
| MS.gene025922.t1 | AT5G13370 | 36.486 | 592 | 347 | 12 | 1 | 575 | 1 | 580 | 3.88e-120 | 368 |
| MS.gene025922.t1 | AT1G28130 | 36.410 | 585 | 341 | 11 | 17 | 575 | 17 | 596 | 8.74e-120 | 367 |
| MS.gene025922.t1 | AT5G13350 | 35.374 | 588 | 359 | 12 | 1 | 575 | 1 | 580 | 9.32e-118 | 361 |
| MS.gene025922.t1 | AT5G13350 | 35.374 | 588 | 359 | 12 | 1 | 575 | 1 | 580 | 9.32e-118 | 361 |
| MS.gene025922.t1 | AT5G13380 | 36.054 | 588 | 354 | 10 | 1 | 575 | 31 | 609 | 4.10e-117 | 361 |
| MS.gene025922.t1 | AT2G47750 | 37.113 | 582 | 348 | 11 | 5 | 575 | 3 | 577 | 1.16e-116 | 358 |
| MS.gene025922.t1 | AT1G48670 | 32.042 | 568 | 318 | 9 | 16 | 575 | 10 | 517 | 2.02e-97 | 306 |
| MS.gene025922.t1 | AT5G51470 | 36.383 | 481 | 286 | 6 | 98 | 569 | 6 | 475 | 2.57e-97 | 305 |
| MS.gene025922.t1 | AT1G28130 | 36.748 | 449 | 257 | 8 | 150 | 575 | 9 | 453 | 7.62e-91 | 288 |
| MS.gene025922.t1 | AT1G48670 | 36.165 | 412 | 245 | 5 | 172 | 575 | 5 | 406 | 5.30e-89 | 281 |
| MS.gene025922.t1 | AT1G48690 | 35.263 | 190 | 114 | 6 | 14 | 200 | 7 | 190 | 1.31e-21 | 93.2 |
Find 116 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAATGCAAAGTACATTTA+TGG | 0.084381 | 7.1:-1040371 | MS.gene025922:CDS |
| CTATTACCACTATGTCTTTA+AGG | 0.098138 | 7.1:-1041532 | MS.gene025922:intron |
| TCATTCCATGGTATATATTT+TGG | 0.122722 | 7.1:+1041386 | None:intergenic |
| ATTATTAGTAGAAGAGAAAT+TGG | 0.187935 | 7.1:-1038268 | MS.gene025922:CDS |
| GGAAACACTCAAAAGAATTT+TGG | 0.206331 | 7.1:-1041717 | MS.gene025922:CDS |
| GCTGAATATTTGCAGAATTT+TGG | 0.212038 | 7.1:-1041680 | MS.gene025922:CDS |
| AGGTTCTATGGAACCATATT+TGG | 0.217500 | 7.1:-1040339 | MS.gene025922:CDS |
| TGGATTATGTTAGCTAGTTC+TGG | 0.251144 | 7.1:+1040446 | None:intergenic |
| TATGCTGTGCTTCCTCAAAT+TGG | 0.269811 | 7.1:-1040203 | MS.gene025922:CDS |
| TACGTAGTTCCCTGGTTCTT+TGG | 0.271512 | 7.1:+1038212 | None:intergenic |
| TGGCATTATGACAGGTTCTA+TGG | 0.272655 | 7.1:-1040351 | MS.gene025922:CDS |
| TCAGAGCCTTTGAACAAGTT+TGG | 0.276112 | 7.1:-1040565 | MS.gene025922:CDS |
| TTTCAGGTTTATACAGGTAT+AGG | 0.281287 | 7.1:-1038434 | MS.gene025922:intron |
| CTTGATCATTACCTTGGATT+AGG | 0.281601 | 7.1:-1038024 | MS.gene025922:CDS |
| CCTTAGAACTTCGGGTTGTT+AGG | 0.281656 | 7.1:-1038068 | MS.gene025922:CDS |
| CTTAAAGACATAGTGGTAAT+AGG | 0.285904 | 7.1:+1041533 | None:intergenic |
| CAGGGAACTACGTAATCTTC+TGG | 0.286130 | 7.1:-1038203 | MS.gene025922:CDS |
| AGTCCAGATGAAGTGATATT+TGG | 0.291634 | 7.1:-1040695 | MS.gene025922:CDS |
| CCTAACAACCCGAAGTTCTA+AGG | 0.305448 | 7.1:+1038068 | None:intergenic |
| TCAAGAATTCTACAGATAAA+AGG | 0.326689 | 7.1:+1041587 | None:intergenic |
| CAGAGCCTTTGAACAAGTTT+GGG | 0.335203 | 7.1:-1040564 | MS.gene025922:CDS |
| ATGTTAGCTAGTTCTGGATT+TGG | 0.354156 | 7.1:+1040452 | None:intergenic |
| TTTATCTGTAGAATTCTTGA+TGG | 0.355516 | 7.1:-1041584 | MS.gene025922:CDS |
| ACTAAATTTCAGGTTTATAC+AGG | 0.363189 | 7.1:-1038440 | MS.gene025922:intron |
| TATTGGAGCCTTAGAACTTC+GGG | 0.374940 | 7.1:-1038076 | MS.gene025922:CDS |
| GGGGATGTGGTAAAAGTTAT+GGG | 0.377506 | 7.1:-1038408 | MS.gene025922:CDS |
| TCTCGTAAAGTCAACTCTAT+TGG | 0.387723 | 7.1:-1038093 | MS.gene025922:CDS |
| AAGGCTTTAAACTTCATATA+CGG | 0.393788 | 7.1:-1040830 | MS.gene025922:CDS |
| CTACGAATAAACTTTAGTTC+TGG | 0.395325 | 7.1:+1038369 | None:intergenic |
| AGCAAACAGTTCAAAACAAA+AGG | 0.397243 | 7.1:-1040806 | MS.gene025922:CDS |
| CCTTTGTGTACTGCTGACTA+TGG | 0.399568 | 7.1:-1040287 | MS.gene025922:CDS |
| CCATAAATGTACTTTGCATT+GGG | 0.403210 | 7.1:+1040371 | None:intergenic |
| GATGTATAGGATTAAGCAAC+TGG | 0.406579 | 7.1:-1040418 | MS.gene025922:CDS |
| ATAGATGACAATATAATGAT+TGG | 0.410685 | 7.1:+1040660 | None:intergenic |
| GCCATAAATGTACTTTGCAT+TGG | 0.412688 | 7.1:+1040370 | None:intergenic |
| TTCATTGCATGTTTGTAAGA+TGG | 0.414552 | 7.1:+1040740 | None:intergenic |
| ATAATCCACAAAAGATGTAT+AGG | 0.416203 | 7.1:-1040431 | MS.gene025922:CDS |
| ACAGCATAAGTTGCCAATTC+AGG | 0.421103 | 7.1:+1040218 | None:intergenic |
| TTTCCGCGAGGAAGTTCAAT+TGG | 0.426349 | 7.1:-1040624 | MS.gene025922:CDS |
| AAAATTCTTGATCATTACCT+TGG | 0.430567 | 7.1:-1038030 | MS.gene025922:CDS |
| AGGGGATGTGGTAAAAGTTA+TGG | 0.432684 | 7.1:-1038409 | MS.gene025922:CDS |
| CCGCCAAATATCACTTCATC+TGG | 0.432735 | 7.1:+1040692 | None:intergenic |
| TACATTTATGGCATTATGAC+AGG | 0.440289 | 7.1:-1040359 | MS.gene025922:CDS |
| AAACCACAATGCAGATATAT+CGG | 0.444589 | 7.1:-1041352 | MS.gene025922:CDS |
| TTAGTTCTGGAGTTGAGTTA+TGG | 0.454186 | 7.1:+1038382 | None:intergenic |
| ATTGTTATGACCACTCCAAC+AGG | 0.456262 | 7.1:-1040071 | MS.gene025922:intron |
| CTATTGGAGCCTTAGAACTT+CGG | 0.462174 | 7.1:-1038077 | MS.gene025922:CDS |
| CAGGTATAGGCTAGGGGATG+TGG | 0.467515 | 7.1:-1038421 | MS.gene025922:CDS |
| TGCAGTTCTGGCACTACGCA+AGG | 0.476283 | 7.1:-1041413 | MS.gene025922:intron |
| GAACTTCGGGTTGTTAGGAA+AGG | 0.487975 | 7.1:-1038063 | MS.gene025922:CDS |
| AACTCAAAGTAACCAATTTG+AGG | 0.491446 | 7.1:+1040191 | None:intergenic |
| ATCTTACAAACATGCAATGA+AGG | 0.492223 | 7.1:-1040738 | MS.gene025922:CDS |
| GCAAACAGTTCAAAACAAAA+GGG | 0.492256 | 7.1:-1040805 | MS.gene025922:CDS |
| GAGTGAATGCTGCAACTGTT+TGG | 0.498901 | 7.1:-1038148 | MS.gene025922:CDS |
| CCTTTGTGTTAATCCTCAGC+CGG | 0.501458 | 7.1:-1040132 | MS.gene025922:CDS |
| AATTACTAAAGATGCAGAAA+GGG | 0.503049 | 7.1:-1041747 | MS.gene025922:CDS |
| CAGAAGATTACGTAGTTCCC+TGG | 0.503210 | 7.1:+1038204 | None:intergenic |
| GTTTATACAGGTATAGGCTA+GGG | 0.505461 | 7.1:-1038428 | MS.gene025922:CDS |
| TCAGTGAGTCCCACCGGCTG+AGG | 0.514095 | 7.1:+1040119 | None:intergenic |
| TCAAACAATTCATCATTCCA+TGG | 0.514252 | 7.1:+1041374 | None:intergenic |
| CTCTTCCCAAACTTGTTCAA+AGG | 0.517970 | 7.1:+1040559 | None:intergenic |
| TGATGAAGACCTGTTCCTAT+AGG | 0.519223 | 7.1:+1041319 | None:intergenic |
| GACATAGCAGTTCGAATGGA+GGG | 0.520344 | 7.1:+1040488 | None:intergenic |
| AGGGAACTACGTAATCTTCT+GGG | 0.522975 | 7.1:-1038202 | MS.gene025922:CDS |
| CCTGTTCCTATAGGCAAAAG+AGG | 0.524965 | 7.1:+1041328 | None:intergenic |
| TAATCTTCTGGGAAATCAGT+GGG | 0.525589 | 7.1:-1038191 | MS.gene025922:CDS |
| GGTTTATACAGGTATAGGCT+AGG | 0.526104 | 7.1:-1038429 | MS.gene025922:CDS |
| TAATTACTAAAGATGCAGAA+AGG | 0.529649 | 7.1:-1041748 | MS.gene025922:CDS |
| TTGTGTTAATCCTCAGCCGG+TGG | 0.532157 | 7.1:-1040129 | MS.gene025922:CDS |
| CCAGATGAAGTGATATTTGG+CGG | 0.533852 | 7.1:-1040692 | MS.gene025922:CDS |
| GATGCTTCTCCCATTCTCAC+TGG | 0.537832 | 7.1:-1041560 | MS.gene025922:CDS |
| GCTGACTATGGAGCTTCTGA+AGG | 0.543026 | 7.1:-1040275 | MS.gene025922:CDS |
| GTAAAACTGAGGCACTATGC+AGG | 0.551972 | 7.1:-1040317 | MS.gene025922:CDS |
| GGACTCACTGAGGTTAAAGT+TGG | 0.561408 | 7.1:-1040107 | MS.gene025922:CDS |
| TTTAGACATAGCAGTTCGAA+TGG | 0.562118 | 7.1:+1040484 | None:intergenic |
| GAAAGATTTACAGTTAGCCG+TGG | 0.563252 | 7.1:-1038304 | MS.gene025922:CDS |
| AAGTCTTTGTGAGTAGCTAG+TGG | 0.565261 | 7.1:+1041614 | None:intergenic |
| CTTTGTAATGATATAAGAGA+AGG | 0.565767 | 7.1:-1040536 | MS.gene025922:CDS |
| ACTAGCTACTCACAAAGACT+TGG | 0.569122 | 7.1:-1041612 | MS.gene025922:CDS |
| GTTGATTTATCCAAAGAACC+AGG | 0.570837 | 7.1:-1038222 | MS.gene025922:CDS |
| TCATTCTCAAGCTGTGTGAG+AGG | 0.572827 | 7.1:+1040164 | None:intergenic |
| ACAACACCTTAAAGACATAG+TGG | 0.579090 | 7.1:+1041526 | None:intergenic |
| AGATGCAGAAAGGGTTCAGA+GGG | 0.579727 | 7.1:-1041738 | MS.gene025922:CDS |
| TGTGTAGGACCTACACATCT+TGG | 0.580216 | 7.1:+1037976 | None:intergenic |
| TAACAGCTGTTCCTAATCCA+AGG | 0.581897 | 7.1:+1038013 | None:intergenic |
| GGAAGCCAAAATATATACCA+TGG | 0.582732 | 7.1:-1041391 | MS.gene025922:CDS |
| TGTGTTAATCCTCAGCCGGT+GGG | 0.586045 | 7.1:-1040128 | MS.gene025922:CDS |
| TATAAAACACCAAGATGTGT+AGG | 0.586504 | 7.1:-1037985 | MS.gene025922:CDS |
| ACTATGGAGCTTCTGAAGGG+TGG | 0.586810 | 7.1:-1040271 | MS.gene025922:CDS |
| ATAGGATTAAGCAACTGGTA+TGG | 0.589066 | 7.1:-1040413 | MS.gene025922:CDS |
| CAGAACTAAAGTTTATTCGT+AGG | 0.592685 | 7.1:-1038368 | MS.gene025922:CDS |
| TTATATTGTCATCTATTATG+CGG | 0.600773 | 7.1:-1040653 | MS.gene025922:CDS |
| ACAGTTAGCCGTGGAAGCAG+CGG | 0.606164 | 7.1:-1038295 | MS.gene025922:CDS |
| TTAACCTCAGTGAGTCCCAC+CGG | 0.608632 | 7.1:+1040113 | None:intergenic |
| AGACATAGCAGTTCGAATGG+AGG | 0.608831 | 7.1:+1040487 | None:intergenic |
| AGCAGTTCGAATGGAGGGAA+CGG | 0.609463 | 7.1:+1040493 | None:intergenic |
| GCATAAGTTGCCAATTCAGG+TGG | 0.614033 | 7.1:+1040221 | None:intergenic |
| TGAGTACTTACCTGTTGGAG+TGG | 0.617705 | 7.1:+1040061 | None:intergenic |
| GCAGTTCTGGCACTACGCAA+GGG | 0.622048 | 7.1:-1041412 | MS.gene025922:intron |
| GTAATCTTCTGGGAAATCAG+TGG | 0.631300 | 7.1:-1038192 | MS.gene025922:CDS |
| AAGATGCAGAAAGGGTTCAG+AGG | 0.633150 | 7.1:-1041739 | MS.gene025922:CDS |
| CTGACTATGGAGCTTCTGAA+GGG | 0.645246 | 7.1:-1040274 | MS.gene025922:CDS |
| CCATAGTCAGCAGTACACAA+AGG | 0.646601 | 7.1:+1040287 | None:intergenic |
| GGTCCGATATATCTGCATTG+TGG | 0.647561 | 7.1:+1041349 | None:intergenic |
| TTTATACAGGTATAGGCTAG+GGG | 0.649562 | 7.1:-1038427 | MS.gene025922:CDS |
| CAAACAGTTCAAAACAAAAG+GGG | 0.653886 | 7.1:-1040804 | MS.gene025922:CDS |
| TTGATTTATCCAAAGAACCA+GGG | 0.653926 | 7.1:-1038221 | MS.gene025922:CDS |
| GAAAGTGAAAGAGTTTAACA+TGG | 0.667358 | 7.1:-1041795 | MS.gene025922:CDS |
| CCGGCTGAGGATTAACACAA+AGG | 0.670791 | 7.1:+1040132 | None:intergenic |
| AACCATATTTGGTAAAACTG+AGG | 0.675088 | 7.1:-1040328 | MS.gene025922:CDS |
| AAACAGTTCAAAACAAAAGG+GGG | 0.677242 | 7.1:-1040803 | MS.gene025922:CDS |
| GTTCTTTGGATAAATCAACA+TGG | 0.683092 | 7.1:+1038226 | None:intergenic |
| TGCAACACAATGTTGTGTGT+AGG | 0.700702 | 7.1:+1037961 | None:intergenic |
| TCAGCCGGTGGGACTCACTG+AGG | 0.714814 | 7.1:-1040117 | MS.gene025922:CDS |
| AATCTTCTGGGAAATCAGTG+GGG | 0.735072 | 7.1:-1038190 | MS.gene025922:CDS |
| ATACCAATTGAACTTCCTCG+CGG | 0.744188 | 7.1:+1040621 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAGTAATAAATATTCT+TGG | - | chr7.1:1041086-1041105 | MS.gene025922:intron | 10.0% |
| !! | AAAATAGAAGAAAAAAACAT+AGG | + | chr7.1:1038767-1038786 | None:intergenic | 15.0% |
| !! | TAAAGAAAAACATCATAATA+AGG | - | chr7.1:1039824-1039843 | MS.gene025922:intron | 15.0% |
| !! | TATTCTATAGATACTATTTA+TGG | + | chr7.1:1038741-1038760 | None:intergenic | 15.0% |
| !! | TGAATAAAGAACAATAAAAA+TGG | + | chr7.1:1038485-1038504 | None:intergenic | 15.0% |
| !! | TTCTTAATGAATATTTGAAT+TGG | + | chr7.1:1041211-1041230 | None:intergenic | 15.0% |
| !!! | AATTTTTCTACTGTATATTT+CGG | - | chr7.1:1040345-1040364 | MS.gene025922:CDS | 15.0% |
| !!! | TGCTATATTTTAATCTTATT+AGG | + | chr7.1:1040819-1040838 | None:intergenic | 15.0% |
| !!! | TTTATTGATTGAAATTCATA+GGG | - | chr7.1:1039895-1039914 | MS.gene025922:intron | 15.0% |
| !!! | TTTTATTGATTGAAATTCAT+AGG | - | chr7.1:1039894-1039913 | MS.gene025922:intron | 15.0% |
| !! | AAAATGAAAAAAGTAACCTA+AGG | + | chr7.1:1040395-1040414 | None:intergenic | 20.0% |
| !! | AACAATAAAAATGGTATACA+AGG | + | chr7.1:1038476-1038495 | None:intergenic | 20.0% |
| !! | ATAGATGACAATATAATGAT+TGG | + | chr7.1:1039055-1039074 | None:intergenic | 20.0% |
| !! | ATGAATAAACTTGTCTAATT+TGG | + | chr7.1:1040764-1040783 | None:intergenic | 20.0% |
| !! | ATTATTAGTAGAAGAGAAAT+TGG | - | chr7.1:1041444-1041463 | MS.gene025922:intron | 20.0% |
| !! | GAAAATATTTATAATGCTTC+TGG | - | chr7.1:1040670-1040689 | MS.gene025922:CDS | 20.0% |
| !! | GAATATAAATTAAATGCTCT+TGG | - | chr7.1:1040367-1040386 | MS.gene025922:CDS | 20.0% |
| !! | TGTTAAAATCGTAATTGAAA+GGG | + | chr7.1:1040646-1040665 | None:intergenic | 20.0% |
| !! | TGTTACATCATTTAACATTA+GGG | + | chr7.1:1040507-1040526 | None:intergenic | 20.0% |
| !! | TTATATTGTCATCTATTATG+CGG | - | chr7.1:1039059-1039078 | MS.gene025922:intron | 20.0% |
| !! | TTGTTAAAATCGTAATTGAA+AGG | + | chr7.1:1040647-1040666 | None:intergenic | 20.0% |
| !! | TTGTTACATCATTTAACATT+AGG | + | chr7.1:1040508-1040527 | None:intergenic | 20.0% |
| !! | TTTAAATCTGTAATGATGTA+TGG | - | chr7.1:1040616-1040635 | MS.gene025922:CDS | 20.0% |
| !!! | CTTTATTTCTGATATTTGTT+GGG | - | chr7.1:1038431-1038450 | MS.gene025922:CDS | 20.0% |
| !!! | TATTTAAACTGCTTTAAATC+TGG | + | chr7.1:1040580-1040599 | None:intergenic | 20.0% |
| !!! | TCTTTATTTCTGATATTTGT+TGG | - | chr7.1:1038430-1038449 | MS.gene025922:CDS | 20.0% |
| !!! | TTATTGATTGAAATTCATAG+GGG | - | chr7.1:1039896-1039915 | MS.gene025922:intron | 20.0% |
| ! | AAAATTCTTGATCATTACCT+TGG | - | chr7.1:1041682-1041701 | MS.gene025922:CDS | 25.0% |
| ! | AATGAAGAAAAAAGTAGTTG+TGG | + | chr7.1:1039761-1039780 | None:intergenic | 25.0% |
| ! | AATTACTAAAGATGCAGAAA+GGG | - | chr7.1:1037965-1037984 | MS.gene025922:CDS | 25.0% |
| ! | AGAGAGTTTCCTATAAAAAA+TGG | - | chr7.1:1038858-1038877 | MS.gene025922:intron | 25.0% |
| ! | ATAATCCACAAAAGATGTAT+AGG | - | chr7.1:1039281-1039300 | MS.gene025922:intron | 25.0% |
| ! | CCAAACAAAAGTAAATTAAC+CGG | + | chr7.1:1039685-1039704 | None:intergenic | 25.0% |
| ! | CTTTGTAATGATATAAGAGA+AGG | - | chr7.1:1039176-1039195 | MS.gene025922:intron | 25.0% |
| ! | GAGAGTTTCCTATAAAAAAT+GGG | - | chr7.1:1038859-1038878 | MS.gene025922:intron | 25.0% |
| ! | GTTACATCATTTAACATTAG+GGG | + | chr7.1:1040506-1040525 | None:intergenic | 25.0% |
| ! | TAATTACTAAAGATGCAGAA+AGG | - | chr7.1:1037964-1037983 | MS.gene025922:CDS | 25.0% |
| ! | TCAAGAATTCTACAGATAAA+AGG | + | chr7.1:1038128-1038147 | None:intergenic | 25.0% |
| ! | TGTTAAATGATGTAACAAAG+TGG | - | chr7.1:1040510-1040529 | MS.gene025922:CDS | 25.0% |
| ! | TTTATCTGTAGAATTCTTGA+TGG | - | chr7.1:1038128-1038147 | MS.gene025922:CDS | 25.0% |
| !! | ATGTATTTTATTATGCTTGG+TGG | - | chr7.1:1040721-1040740 | MS.gene025922:CDS | 25.0% |
| !! | CATCATTACAGATTTAAAAC+TGG | + | chr7.1:1040614-1040633 | None:intergenic | 25.0% |
| !! | CATTTCTCTTTCATTTTGAA+CGG | - | chr7.1:1040145-1040164 | MS.gene025922:CDS | 25.0% |
| !! | TCATTCCATGGTATATATTT+TGG | + | chr7.1:1038329-1038348 | None:intergenic | 25.0% |
| !! | TGGATGTATTTTATTATGCT+TGG | - | chr7.1:1040718-1040737 | MS.gene025922:CDS | 25.0% |
| !! | TTAATCCTATACATCTTTTG+TGG | + | chr7.1:1039289-1039308 | None:intergenic | 25.0% |
| !! | TTATTTAATCGAGCTTTTCT+TGG | - | chr7.1:1040886-1040905 | MS.gene025922:intron | 25.0% |
| !! | TTCAACATACTCTCTTTTAT+TGG | + | chr7.1:1039973-1039992 | None:intergenic | 25.0% |
| !! | TTTTCCGTTGTTTATACAAT+CGG | + | chr7.1:1038560-1038579 | None:intergenic | 25.0% |
| !!! | AAGGCTTTAAACTTCATATA+CGG | - | chr7.1:1038882-1038901 | MS.gene025922:intron | 25.0% |
| !!! | ACTAAATTTCAGGTTTATAC+AGG | - | chr7.1:1041272-1041291 | MS.gene025922:intron | 25.0% |
| AAACAGTTCAAAACAAAAGG+GGG | - | chr7.1:1038909-1038928 | MS.gene025922:intron | 30.0% | |
| AAACCACAATGCAGATATAT+CGG | - | chr7.1:1038360-1038379 | MS.gene025922:CDS | 30.0% | |
| AACCATATTTGGTAAAACTG+AGG | - | chr7.1:1039384-1039403 | MS.gene025922:intron | 30.0% | |
| AACCTGAAATTTAGTCACAA+AGG | + | chr7.1:1041267-1041286 | None:intergenic | 30.0% | |
| AACTCAAAGTAACCAATTTG+AGG | + | chr7.1:1039524-1039543 | None:intergenic | 30.0% | |
| ACCATAAAACATTTCACAAC+TGG | - | chr7.1:1040322-1040341 | MS.gene025922:CDS | 30.0% | |
| AGCAAACAGTTCAAAACAAA+AGG | - | chr7.1:1038906-1038925 | MS.gene025922:intron | 30.0% | |
| AGCGAAAATTTATGAGTTCA+AGG | + | chr7.1:1038262-1038281 | None:intergenic | 30.0% | |
| ATAAACAACGGAAAATGATG+CGG | - | chr7.1:1038565-1038584 | MS.gene025922:intron | 30.0% | |
| ATAATTGAGTACTTACCTGT+TGG | + | chr7.1:1039659-1039678 | None:intergenic | 30.0% | |
| ATAGATCACATCAAATCATG+TGG | + | chr7.1:1039944-1039963 | None:intergenic | 30.0% | |
| ATCTTACAAACATGCAATGA+AGG | - | chr7.1:1038974-1038993 | MS.gene025922:intron | 30.0% | |
| ATGAAATTATGATGTGTCCT+TGG | + | chr7.1:1041040-1041059 | None:intergenic | 30.0% | |
| ATGTGGGTCACATATATATT+TGG | + | chr7.1:1039927-1039946 | None:intergenic | 30.0% | |
| CAAACAGTTCAAAACAAAAG+GGG | - | chr7.1:1038908-1038927 | MS.gene025922:intron | 30.0% | |
| CAACTGTCAAATGTTATAGT+TGG | - | chr7.1:1038709-1038728 | MS.gene025922:intron | 30.0% | |
| CAGAACTAAAGTTTATTCGT+AGG | - | chr7.1:1041344-1041363 | MS.gene025922:CDS | 30.0% | |
| CCATAAATGTACTTTGCATT+GGG | + | chr7.1:1039344-1039363 | None:intergenic | 30.0% | |
| CTATTACCACTATGTCTTTA+AGG | - | chr7.1:1038180-1038199 | MS.gene025922:CDS | 30.0% | |
| CTTAAAGACATAGTGGTAAT+AGG | + | chr7.1:1038182-1038201 | None:intergenic | 30.0% | |
| GAAAGTGAAAGAGTTTAACA+TGG | - | chr7.1:1037917-1037936 | MS.gene025922:CDS | 30.0% | |
| GCAAACAGTTCAAAACAAAA+GGG | - | chr7.1:1038907-1038926 | MS.gene025922:intron | 30.0% | |
| GTAAGTACTCAATTATTGTC+CGG | - | chr7.1:1039663-1039682 | MS.gene025922:intron | 30.0% | |
| GTTCTTTGGATAAATCAACA+TGG | + | chr7.1:1041489-1041508 | None:intergenic | 30.0% | |
| GTTTCCTATAAAAAATGGGA+AGG | - | chr7.1:1038863-1038882 | MS.gene025922:intron | 30.0% | |
| TACATTTATGGCATTATGAC+AGG | - | chr7.1:1039353-1039372 | MS.gene025922:intron | 30.0% | |
| TAGATCACATCAAATCATGT+GGG | + | chr7.1:1039943-1039962 | None:intergenic | 30.0% | |
| TATAAAACACCAAGATGTGT+AGG | - | chr7.1:1041727-1041746 | MS.gene025922:CDS | 30.0% | |
| TCAAACAATTCATCATTCCA+TGG | + | chr7.1:1038341-1038360 | None:intergenic | 30.0% | |
| TCAAGGACTAATTAGATGAA+GGG | + | chr7.1:1038245-1038264 | None:intergenic | 30.0% | |
| TTCAAGGACTAATTAGATGA+AGG | + | chr7.1:1038246-1038265 | None:intergenic | 30.0% | |
| TTCATTGCATGTTTGTAAGA+TGG | + | chr7.1:1038975-1038994 | None:intergenic | 30.0% | |
| TTGATTTATCCAAAGAACCA+GGG | - | chr7.1:1041491-1041510 | MS.gene025922:intron | 30.0% | |
| TTTAACATTAGGGGTCAAAA+AGG | + | chr7.1:1040497-1040516 | None:intergenic | 30.0% | |
| ! | CTACGAATAAACTTTAGTTC+TGG | + | chr7.1:1041346-1041365 | None:intergenic | 30.0% |
| ! | GCTGAATATTTGCAGAATTT+TGG | - | chr7.1:1038032-1038051 | MS.gene025922:CDS | 30.0% |
| ! | GGAAACACTCAAAAGAATTT+TGG | - | chr7.1:1037995-1038014 | MS.gene025922:CDS | 30.0% |
| ! | TCCAGTTGTGAAATGTTTTA+TGG | + | chr7.1:1040326-1040345 | None:intergenic | 30.0% |
| !! | CCGGTTAATTTACTTTTGTT+TGG | - | chr7.1:1039682-1039701 | MS.gene025922:intron | 30.0% |
| !! | TATAAAAGTGCCATGAATCA+TGG | + | chr7.1:1040967-1040986 | None:intergenic | 30.0% |
| !! | TTTCAGGTTTATACAGGTAT+AGG | - | chr7.1:1041278-1041297 | MS.gene025922:intron | 30.0% |
| !!! | AAAGCCTTCCCATTTTTTAT+AGG | + | chr7.1:1038870-1038889 | None:intergenic | 30.0% |
| AAAAAAGTAGTTGTGGTCCT+TGG | + | chr7.1:1039754-1039773 | None:intergenic | 35.0% | |
| AAGTGGCAAAACAATGTTTG+TGG | + | chr7.1:1040267-1040286 | None:intergenic | 35.0% | |
| ACAACACCTTAAAGACATAG+TGG | + | chr7.1:1038189-1038208 | None:intergenic | 35.0% | |
| AGGTTCTATGGAACCATATT+TGG | - | chr7.1:1039373-1039392 | MS.gene025922:intron | 35.0% | |
| AGTCCAGATGAAGTGATATT+TGG | - | chr7.1:1039017-1039036 | MS.gene025922:intron | 35.0% | |
| ATAGGATTAAGCAACTGGTA+TGG | - | chr7.1:1039299-1039318 | MS.gene025922:intron | 35.0% | |
| ATCGGCTACTAAACTATGAT+TGG | + | chr7.1:1038542-1038561 | None:intergenic | 35.0% | |
| CAAGGACTAATTAGATGAAG+GGG | + | chr7.1:1038244-1038263 | None:intergenic | 35.0% | |
| CACCTTTGTGACTAAATTTC+AGG | - | chr7.1:1041262-1041281 | MS.gene025922:intron | 35.0% | |
| CCCAATGCAAAGTACATTTA+TGG | - | chr7.1:1039341-1039360 | MS.gene025922:intron | 35.0% | |
| CTTGATCATTACCTTGGATT+AGG | - | chr7.1:1041688-1041707 | MS.gene025922:CDS | 35.0% | |
| GAGATGCTTGAAGTTTAAGT+AGG | - | chr7.1:1040457-1040476 | MS.gene025922:CDS | 35.0% | |
| GATGTATAGGATTAAGCAAC+TGG | - | chr7.1:1039294-1039313 | MS.gene025922:intron | 35.0% | |
| GATTTACACGTAAGAGAGTA+GGG | + | chr7.1:1040183-1040202 | None:intergenic | 35.0% | |
| GCAAAACAATGTTTGTGGTT+TGG | + | chr7.1:1040262-1040281 | None:intergenic | 35.0% | |
| GCCATAAATGTACTTTGCAT+TGG | + | chr7.1:1039345-1039364 | None:intergenic | 35.0% | |
| GGAAGCCAAAATATATACCA+TGG | - | chr7.1:1038321-1038340 | MS.gene025922:CDS | 35.0% | |
| GTACTAGTGTATTACTACCA+AGG | - | chr7.1:1039734-1039753 | MS.gene025922:intron | 35.0% | |
| GTAGCCGATTGTATAAACAA+CGG | - | chr7.1:1038553-1038572 | MS.gene025922:intron | 35.0% | |
| GTTTATACAGGTATAGGCTA+GGG | - | chr7.1:1041284-1041303 | MS.gene025922:intron | 35.0% | |
| TCATGGAACCAAAGTTGAAA+AGG | + | chr7.1:1040950-1040969 | None:intergenic | 35.0% | |
| TCTCGTAAAGTCAACTCTAT+TGG | - | chr7.1:1041619-1041638 | MS.gene025922:CDS | 35.0% | |
| TGATTTACACGTAAGAGAGT+AGG | + | chr7.1:1040184-1040203 | None:intergenic | 35.0% | |
| TGGATTATGTTAGCTAGTTC+TGG | + | chr7.1:1039269-1039288 | None:intergenic | 35.0% | |
| TGTTGATATAACCTATGCCA+AGG | - | chr7.1:1041020-1041039 | MS.gene025922:intron | 35.0% | |
| TTTAGACATAGCAGTTCGAA+TGG | + | chr7.1:1039231-1039250 | None:intergenic | 35.0% | |
| TTTATACAGGTATAGGCTAG+GGG | - | chr7.1:1041285-1041304 | MS.gene025922:intron | 35.0% | |
| ! | AACTTTGGTTCCATGATTCA+TGG | - | chr7.1:1040954-1040973 | MS.gene025922:intron | 35.0% |
| ! | AATAGGTTTTCCAGTGAGAA+TGG | + | chr7.1:1038165-1038184 | None:intergenic | 35.0% |
| ! | ACTTGTGTTAAAGAGTGTGT+TGG | + | chr7.1:1039853-1039872 | None:intergenic | 35.0% |
| ! | ATAGGTTTTCCAGTGAGAAT+GGG | + | chr7.1:1038164-1038183 | None:intergenic | 35.0% |
| ! | CCAATTCAGGTGGAATTTTT+GGG | + | chr7.1:1039484-1039503 | None:intergenic | 35.0% |
| ! | CCTTTTTGCTAATTGGAGTT+GGG | - | chr7.1:1038812-1038831 | MS.gene025922:intron | 35.0% |
| ! | GATTTTCAGCAAAGTCTCAT+TGG | - | chr7.1:1041124-1041143 | MS.gene025922:intron | 35.0% |
| ! | GCTTTTCTTGGAGTTGAAAT+TGG | - | chr7.1:1040898-1040917 | MS.gene025922:intron | 35.0% |
| ! | GTTGATTTATCCAAAGAACC+AGG | - | chr7.1:1041490-1041509 | MS.gene025922:intron | 35.0% |
| ! | TAATCTTCTGGGAAATCAGT+GGG | - | chr7.1:1041521-1041540 | MS.gene025922:intron | 35.0% |
| ! | TACCATGCCTTTTTGCTAAT+TGG | - | chr7.1:1038805-1038824 | MS.gene025922:intron | 35.0% |
| ! | TGCCTCAGTTTTACCAAATA+TGG | + | chr7.1:1039389-1039408 | None:intergenic | 35.0% |
| ! | TGCTATGTCCTTTTCAACTT+TGG | - | chr7.1:1040939-1040958 | MS.gene025922:intron | 35.0% |
| !! | ATGTTAGCTAGTTCTGGATT+TGG | + | chr7.1:1039263-1039282 | None:intergenic | 35.0% |
| !! | TTAGTTCTGGAGTTGAGTTA+TGG | + | chr7.1:1041333-1041352 | None:intergenic | 35.0% |
| !! | TTTTGCCACTTACTATGAGT+AGG | - | chr7.1:1040276-1040295 | MS.gene025922:CDS | 35.0% |
| !!! | TTGCAGAATTTTGGTCTTGA+TGG | - | chr7.1:1038041-1038060 | MS.gene025922:CDS | 35.0% |
| AAGTCTTTGTGAGTAGCTAG+TGG | + | chr7.1:1038101-1038120 | None:intergenic | 40.0% | |
| ACAGCATAAGTTGCCAATTC+AGG | + | chr7.1:1039497-1039516 | None:intergenic | 40.0% | |
| ACTAGCTACTCACAAAGACT+TGG | - | chr7.1:1038100-1038119 | MS.gene025922:CDS | 40.0% | |
| AGGGAACTACGTAATCTTCT+GGG | - | chr7.1:1041510-1041529 | MS.gene025922:intron | 40.0% | |
| AGGGGATGTGGTAAAAGTTA+TGG | - | chr7.1:1041303-1041322 | MS.gene025922:intron | 40.0% | |
| ATACCAATTGAACTTCCTCG+CGG | + | chr7.1:1039094-1039113 | None:intergenic | 40.0% | |
| ATAGGAAACTCTCTGCAGAA+AGG | + | chr7.1:1038852-1038871 | None:intergenic | 40.0% | |
| ATCTGCCTACTCATAGTAAG+TGG | + | chr7.1:1040284-1040303 | None:intergenic | 40.0% | |
| ATTGTTATGACCACTCCAAC+AGG | - | chr7.1:1039641-1039660 | MS.gene025922:intron | 40.0% | |
| CAGAGCCTTTGAACAAGTTT+GGG | - | chr7.1:1039148-1039167 | MS.gene025922:intron | 40.0% | |
| CCAGATGAAGTGATATTTGG+CGG | - | chr7.1:1039020-1039039 | MS.gene025922:intron | 40.0% | |
| CCCAAAAATTCCACCTGAAT+TGG | - | chr7.1:1039481-1039500 | MS.gene025922:intron | 40.0% | |
| CCCAACTCCAATTAGCAAAA+AGG | + | chr7.1:1038815-1038834 | None:intergenic | 40.0% | |
| CTATTGGAGCCTTAGAACTT+CGG | - | chr7.1:1041635-1041654 | MS.gene025922:CDS | 40.0% | |
| CTCCAATTAGCAAAAAGGCA+TGG | + | chr7.1:1038810-1038829 | None:intergenic | 40.0% | |
| GAAAGATTTACAGTTAGCCG+TGG | - | chr7.1:1041408-1041427 | MS.gene025922:CDS | 40.0% | |
| GCAGATTGTTAGTGCAAGTT+TGG | - | chr7.1:1040298-1040317 | MS.gene025922:CDS | 40.0% | |
| GGCGCATAGTATAAAACTGT+GGG | - | chr7.1:1040051-1040070 | MS.gene025922:intron | 40.0% | |
| GGGGATGTGGTAAAAGTTAT+GGG | - | chr7.1:1041304-1041323 | MS.gene025922:intron | 40.0% | |
| GGTTTATACAGGTATAGGCT+AGG | - | chr7.1:1041283-1041302 | MS.gene025922:intron | 40.0% | |
| GTCTAATTTGGTCCCAAAGA+TGG | + | chr7.1:1040752-1040771 | None:intergenic | 40.0% | |
| TAACAGCTGTTCCTAATCCA+AGG | + | chr7.1:1041702-1041721 | None:intergenic | 40.0% | |
| TATGACACGTGCTTACTTTG+TGG | - | chr7.1:1040698-1040717 | MS.gene025922:CDS | 40.0% | |
| TATGCTGTGCTTCCTCAAAT+TGG | - | chr7.1:1039509-1039528 | MS.gene025922:intron | 40.0% | |
| TATTGGAGCCTTAGAACTTC+GGG | - | chr7.1:1041636-1041655 | MS.gene025922:CDS | 40.0% | |
| TCAGAGCCTTTGAACAAGTT+TGG | - | chr7.1:1039147-1039166 | MS.gene025922:intron | 40.0% | |
| TGAAAAGGACATAGCAGATG+AGG | + | chr7.1:1040935-1040954 | None:intergenic | 40.0% | |
| TGATGAAGACCTGTTCCTAT+AGG | + | chr7.1:1038396-1038415 | None:intergenic | 40.0% | |
| TGCAACACAATGTTGTGTGT+AGG | + | chr7.1:1041754-1041773 | None:intergenic | 40.0% | |
| TGGCATTATGACAGGTTCTA+TGG | - | chr7.1:1039361-1039380 | MS.gene025922:intron | 40.0% | |
| TGGCGCATAGTATAAAACTG+TGG | - | chr7.1:1040050-1040069 | MS.gene025922:intron | 40.0% | |
| TGTTCATCAGTCATGCTATG+TGG | + | chr7.1:1038655-1038674 | None:intergenic | 40.0% | |
| TTAAATGCTCTTGGCACCTT+AGG | - | chr7.1:1040376-1040395 | MS.gene025922:CDS | 40.0% | |
| TTATGATGTGTCCTTGGCAT+AGG | + | chr7.1:1041034-1041053 | None:intergenic | 40.0% | |
| TTTGCATTGGGAAAAAGCTC+TGG | + | chr7.1:1039332-1039351 | None:intergenic | 40.0% | |
| ! | AATCTTCTGGGAAATCAGTG+GGG | - | chr7.1:1041522-1041541 | MS.gene025922:intron | 40.0% |
| ! | CTCTTCCCAAACTTGTTCAA+AGG | + | chr7.1:1039156-1039175 | None:intergenic | 40.0% |
| ! | GCCAATTCAGGTGGAATTTT+TGG | + | chr7.1:1039485-1039504 | None:intergenic | 40.0% |
| ! | GCCTTTTTGCTAATTGGAGT+TGG | - | chr7.1:1038811-1038830 | MS.gene025922:intron | 40.0% |
| ! | GTAATCTTCTGGGAAATCAG+TGG | - | chr7.1:1041520-1041539 | MS.gene025922:intron | 40.0% |
| ! | TACGAATGTTACTTGCACTG+TGG | - | chr7.1:1040030-1040049 | MS.gene025922:intron | 40.0% |
| ! | TGTGTTAAAGAGTGTGTTGG+TGG | + | chr7.1:1039850-1039869 | None:intergenic | 40.0% |
| ! | TTGGTGGTTTGACCATCTTT+GGG | - | chr7.1:1040737-1040756 | MS.gene025922:CDS | 40.0% |
| !! | TCTCTTAACTGTGCTACTTC+AGG | + | chr7.1:1040537-1040556 | None:intergenic | 40.0% |
| AAGATGCAGAAAGGGTTCAG+AGG | - | chr7.1:1037973-1037992 | MS.gene025922:CDS | 45.0% | |
| AGACATAGCAGTTCGAATGG+AGG | + | chr7.1:1039228-1039247 | None:intergenic | 45.0% | |
| AGATGCAGAAAGGGTTCAGA+GGG | - | chr7.1:1037974-1037993 | MS.gene025922:CDS | 45.0% | |
| CAGAAGATTACGTAGTTCCC+TGG | + | chr7.1:1041511-1041530 | None:intergenic | 45.0% | |
| CAGGGAACTACGTAATCTTC+TGG | - | chr7.1:1041509-1041528 | MS.gene025922:intron | 45.0% | |
| CCATAGTCAGCAGTACACAA+AGG | + | chr7.1:1039428-1039447 | None:intergenic | 45.0% | |
| CCGCCAAATATCACTTCATC+TGG | + | chr7.1:1039023-1039042 | None:intergenic | 45.0% | |
| CCTAACAACCCGAAGTTCTA+AGG | + | chr7.1:1041647-1041666 | None:intergenic | 45.0% | |
| CCTGTTCCTATAGGCAAAAG+AGG | + | chr7.1:1038387-1038406 | None:intergenic | 45.0% | |
| CCTTTGTGTTAATCCTCAGC+CGG | - | chr7.1:1039580-1039599 | MS.gene025922:intron | 45.0% | |
| CTGACTATGGAGCTTCTGAA+GGG | - | chr7.1:1039438-1039457 | MS.gene025922:intron | 45.0% | |
| GACATAGCAGTTCGAATGGA+GGG | + | chr7.1:1039227-1039246 | None:intergenic | 45.0% | |
| GAGTGAATGCTGCAACTGTT+TGG | - | chr7.1:1041564-1041583 | MS.gene025922:CDS | 45.0% | |
| GCATAAGTTGCCAATTCAGG+TGG | + | chr7.1:1039494-1039513 | None:intergenic | 45.0% | |
| GGACTCACTGAGGTTAAAGT+TGG | - | chr7.1:1039605-1039624 | MS.gene025922:intron | 45.0% | |
| GGTCCGATATATCTGCATTG+TGG | + | chr7.1:1038366-1038385 | None:intergenic | 45.0% | |
| TCATACTGCGAATGTGATGC+TGG | - | chr7.1:1039780-1039799 | MS.gene025922:intron | 45.0% | |
| TCATTCTCAAGCTGTGTGAG+AGG | + | chr7.1:1039551-1039570 | None:intergenic | 45.0% | |
| TGAGTACTTACCTGTTGGAG+TGG | + | chr7.1:1039654-1039673 | None:intergenic | 45.0% | |
| TGTGTAGGACCTACACATCT+TGG | + | chr7.1:1041739-1041758 | None:intergenic | 45.0% | |
| TTTCCGCGAGGAAGTTCAAT+TGG | - | chr7.1:1039088-1039107 | MS.gene025922:intron | 45.0% | |
| ! | ATCGGACCTCTTTTGCCTAT+AGG | - | chr7.1:1038378-1038397 | MS.gene025922:CDS | 45.0% |
| ! | CCTCTTTTGCCTATAGGAAC+AGG | - | chr7.1:1038384-1038403 | MS.gene025922:CDS | 45.0% |
| ! | CCTTTGTGTACTGCTGACTA+TGG | - | chr7.1:1039425-1039444 | MS.gene025922:intron | 45.0% |
| ! | CTTGGTGGTTTGACCATCTT+TGG | - | chr7.1:1040736-1040755 | MS.gene025922:CDS | 45.0% |
| ! | GACAAGTCTTTTGTCGATGC+AGG | - | chr7.1:1041586-1041605 | MS.gene025922:CDS | 45.0% |
| ! | GTAAAACTGAGGCACTATGC+AGG | - | chr7.1:1039395-1039414 | MS.gene025922:intron | 45.0% |
| ! | TAATTTTGCCGCTGCTTCCA+CGG | + | chr7.1:1041428-1041447 | None:intergenic | 45.0% |
| ! | TACGTAGTTCCCTGGTTCTT+TGG | + | chr7.1:1041503-1041522 | None:intergenic | 45.0% |
| !! | CCTTAGAACTTCGGGTTGTT+AGG | - | chr7.1:1041644-1041663 | MS.gene025922:CDS | 45.0% |
| !! | GAACTTCGGGTTGTTAGGAA+AGG | - | chr7.1:1041649-1041668 | MS.gene025922:CDS | 45.0% |
| ACTGGGTCTAGGGAAGCAAA+TGG | + | chr7.1:1040228-1040247 | None:intergenic | 50.0% | |
| AGCAGTTCGAATGGAGGGAA+CGG | + | chr7.1:1039222-1039241 | None:intergenic | 50.0% | |
| ATTTGCTTCCCTAGACCCAG+TGG | - | chr7.1:1040227-1040246 | MS.gene025922:CDS | 50.0% | |
| CCGGCTGAGGATTAACACAA+AGG | + | chr7.1:1039583-1039602 | None:intergenic | 50.0% | |
| GAACCGTACTCTTGCAGTTC+TGG | - | chr7.1:1038287-1038306 | MS.gene025922:CDS | 50.0% | |
| GATGCTTCTCCCATTCTCAC+TGG | - | chr7.1:1038152-1038171 | MS.gene025922:CDS | 50.0% | |
| GCTGACTATGGAGCTTCTGA+AGG | - | chr7.1:1039437-1039456 | MS.gene025922:intron | 50.0% | |
| GGACATAGCAGATGAGGTCA+AGG | + | chr7.1:1040929-1040948 | None:intergenic | 50.0% | |
| GTGCCAGAACTGCAAGAGTA+CGG | + | chr7.1:1038293-1038312 | None:intergenic | 50.0% | |
| TCCATTGACCACTGGGTCTA+GGG | + | chr7.1:1040238-1040257 | None:intergenic | 50.0% | |
| TGTGTTAATCCTCAGCCGGT+GGG | - | chr7.1:1039584-1039603 | MS.gene025922:intron | 50.0% | |
| TTAACCTCAGTGAGTCCCAC+CGG | + | chr7.1:1039602-1039621 | None:intergenic | 50.0% | |
| TTGTGTTAATCCTCAGCCGG+TGG | - | chr7.1:1039583-1039602 | MS.gene025922:intron | 50.0% | |
| ! | ACTATGGAGCTTCTGAAGGG+TGG | - | chr7.1:1039441-1039460 | MS.gene025922:intron | 50.0% |
| ! | GTTTGGCTCCATTGACCACT+GGG | + | chr7.1:1040245-1040264 | None:intergenic | 50.0% |
| !! | ATGCGGACTAATTTTCCGCG+AGG | - | chr7.1:1039076-1039095 | MS.gene025922:intron | 50.0% |
| ACAGTTAGCCGTGGAAGCAG+CGG | - | chr7.1:1041417-1041436 | MS.gene025922:intron | 55.0% | |
| ACTGCGAATGTGATGCTGGC+AGG | - | chr7.1:1039784-1039803 | MS.gene025922:intron | 55.0% | |
| CAGGTATAGGCTAGGGGATG+TGG | - | chr7.1:1041291-1041310 | MS.gene025922:intron | 55.0% | |
| CTCCATTGACCACTGGGTCT+AGG | + | chr7.1:1040239-1040258 | None:intergenic | 55.0% | |
| TCCCTAGACCCAGTGGTCAA+TGG | - | chr7.1:1040234-1040253 | MS.gene025922:CDS | 55.0% | |
| ! | GCAGTTCTGGCACTACGCAA+GGG | - | chr7.1:1038300-1038319 | MS.gene025922:CDS | 55.0% |
| ! | GGTTTGGCTCCATTGACCAC+TGG | + | chr7.1:1040246-1040265 | None:intergenic | 55.0% |
| ! | TGCAGTTCTGGCACTACGCA+AGG | - | chr7.1:1038299-1038318 | MS.gene025922:CDS | 55.0% |
| TCAGCCGGTGGGACTCACTG+AGG | - | chr7.1:1039595-1039614 | MS.gene025922:intron | 65.0% | |
| ! | TCAGTGAGTCCCACCGGCTG+AGG | + | chr7.1:1039596-1039615 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 1037909 | 1041825 | 1037909 | ID=MS.gene025922 |
| chr7.1 | mRNA | 1037909 | 1041825 | 1037909 | ID=MS.gene025922.t1;Parent=MS.gene025922 |
| chr7.1 | exon | 1041533 | 1041825 | 1041533 | ID=MS.gene025922.t1.exon1;Parent=MS.gene025922.t1 |
| chr7.1 | CDS | 1041533 | 1041825 | 1041533 | ID=cds.MS.gene025922.t1;Parent=MS.gene025922.t1 |
| chr7.1 | exon | 1041329 | 1041430 | 1041329 | ID=MS.gene025922.t1.exon2;Parent=MS.gene025922.t1 |
| chr7.1 | CDS | 1041329 | 1041430 | 1041329 | ID=cds.MS.gene025922.t1;Parent=MS.gene025922.t1 |
| chr7.1 | exon | 1040072 | 1040874 | 1040072 | ID=MS.gene025922.t1.exon3;Parent=MS.gene025922.t1 |
| chr7.1 | CDS | 1040072 | 1040874 | 1040072 | ID=cds.MS.gene025922.t1;Parent=MS.gene025922.t1 |
| chr7.1 | exon | 1037909 | 1038450 | 1037909 | ID=MS.gene025922.t1.exon4;Parent=MS.gene025922.t1 |
| chr7.1 | CDS | 1037909 | 1038450 | 1037909 | ID=cds.MS.gene025922.t1;Parent=MS.gene025922.t1 |
| Gene Sequence |
| Protein sequence |
