Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34503.t1 | XP_003592284.1 | 100 | 449 | 0 | 0 | 1 | 449 | 1 | 449 | 3.10E-263 | 917.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34503.t1 | P37392 | 97.8 | 447 | 9 | 1 | 1 | 447 | 1 | 446 | 7.9e-260 | 897.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34503.t1 | G7IAN2 | 100.0 | 449 | 0 | 0 | 1 | 449 | 1 | 449 | 2.2e-263 | 917.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049251 | MS.gene34503 | 0.806757 | 7.05E-50 | -1.69E-46 |
| MS.gene049298 | MS.gene34503 | 0.818505 | 1.89E-52 | -1.69E-46 |
| MS.gene050875 | MS.gene34503 | 0.817588 | 3.05E-52 | -1.69E-46 |
| MS.gene051896 | MS.gene34503 | 0.824789 | 6.67E-54 | -1.69E-46 |
| MS.gene051914 | MS.gene34503 | 0.840182 | 1.01E-57 | -1.69E-46 |
| MS.gene052308 | MS.gene34503 | 0.854343 | 1.31E-61 | -1.69E-46 |
| MS.gene052367 | MS.gene34503 | 0.830936 | 2.22E-55 | -1.69E-46 |
| MS.gene053173 | MS.gene34503 | 0.877005 | 8.89E-69 | -1.69E-46 |
| MS.gene053283 | MS.gene34503 | 0.814828 | 1.26E-51 | -1.69E-46 |
| MS.gene053348 | MS.gene34503 | 0.844851 | 5.85E-59 | -1.69E-46 |
| MS.gene054551 | MS.gene34503 | 0.874642 | 5.76E-68 | -1.69E-46 |
| MS.gene054552 | MS.gene34503 | 0.806108 | 9.65E-50 | -1.69E-46 |
| MS.gene054593 | MS.gene34503 | 0.862435 | 5.08E-64 | -1.69E-46 |
| MS.gene054633 | MS.gene34503 | 0.838057 | 3.60E-57 | -1.69E-46 |
| MS.gene054662 | MS.gene34503 | 0.833656 | 4.71E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene34503 | 0.817839 | 2.68E-52 | -1.69E-46 |
| MS.gene055308 | MS.gene34503 | 0.843206 | 1.62E-58 | -1.69E-46 |
| MS.gene055578 | MS.gene34503 | 0.863571 | 2.26E-64 | -1.69E-46 |
| MS.gene056041 | MS.gene34503 | 0.837462 | 5.13E-57 | -1.69E-46 |
| MS.gene05640 | MS.gene34503 | 0.852923 | 3.36E-61 | -1.69E-46 |
| MS.gene056526 | MS.gene34503 | 0.802828 | 4.66E-49 | -1.69E-46 |
| MS.gene056528 | MS.gene34503 | 0.813317 | 2.72E-51 | -1.69E-46 |
| MS.gene05652 | MS.gene34503 | 0.865243 | 6.80E-65 | -1.69E-46 |
| MS.gene05732 | MS.gene34503 | 0.857721 | 1.35E-62 | -1.69E-46 |
| MS.gene057367 | MS.gene34503 | 0.822749 | 2.01E-53 | -1.69E-46 |
| MS.gene057458 | MS.gene34503 | 0.815175 | 1.06E-51 | -1.69E-46 |
| MS.gene057669 | MS.gene34503 | 0.864835 | 9.13E-65 | -1.69E-46 |
| MS.gene058013 | MS.gene34503 | 0.820802 | 5.66E-53 | -1.69E-46 |
| MS.gene058128 | MS.gene34503 | 0.844662 | 6.58E-59 | -1.69E-46 |
| MS.gene058789 | MS.gene34503 | 0.80387 | 2.84E-49 | -1.69E-46 |
| MS.gene058849 | MS.gene34503 | 0.815193 | 1.05E-51 | -1.69E-46 |
| MS.gene058853 | MS.gene34503 | 0.854186 | 1.46E-61 | -1.69E-46 |
| MS.gene05926 | MS.gene34503 | 0.821748 | 3.42E-53 | -1.69E-46 |
| MS.gene059616 | MS.gene34503 | 0.808417 | 3.13E-50 | -1.69E-46 |
| MS.gene060473 | MS.gene34503 | 0.830383 | 3.03E-55 | -1.69E-46 |
| MS.gene060565 | MS.gene34503 | 0.810727 | 9.98E-51 | -1.69E-46 |
| MS.gene06093 | MS.gene34503 | 0.867602 | 1.21E-65 | -1.69E-46 |
| MS.gene061099 | MS.gene34503 | 0.824048 | 9.97E-54 | -1.69E-46 |
| MS.gene061260 | MS.gene34503 | 0.86031 | 2.26E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34503 | MS.gene013972 | PPI |
| MS.gene050630 | MS.gene34503 | PPI |
| MS.gene34503 | MS.gene58838 | PPI |
| MS.gene34503 | MS.gene024462 | PPI |
| MS.gene35118 | MS.gene34503 | PPI |
| MS.gene34503 | MS.gene014419 | PPI |
| MS.gene42253 | MS.gene34503 | PPI |
| MS.gene34503 | MS.gene025926 | PPI |
| MS.gene34503 | MS.gene017695 | PPI |
| MS.gene064762 | MS.gene34503 | PPI |
| MS.gene36449 | MS.gene34503 | PPI |
| MS.gene69396 | MS.gene34503 | PPI |
| MS.gene34503 | MS.gene22813 | PPI |
| MS.gene028342 | MS.gene34503 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34503.t1 | MTR_1g101130 | 100.000 | 449 | 0 | 0 | 1 | 449 | 1 | 449 | 0.0 | 946 |
| MS.gene34503.t1 | MTR_7g089120 | 96.413 | 446 | 15 | 1 | 1 | 446 | 1 | 445 | 0.0 | 905 |
| MS.gene34503.t1 | MTR_4g019090 | 97.674 | 430 | 10 | 0 | 1 | 430 | 1 | 430 | 0.0 | 863 |
| MS.gene34503.t1 | MTR_4g019110 | 97.209 | 430 | 12 | 0 | 1 | 430 | 1 | 430 | 0.0 | 857 |
| MS.gene34503.t1 | MTR_2g031310 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 850 |
| MS.gene34503.t1 | MTR_4g017630 | 95.814 | 430 | 18 | 0 | 1 | 430 | 1 | 430 | 0.0 | 847 |
| MS.gene34503.t1 | MTR_4g094535 | 95.116 | 430 | 21 | 0 | 1 | 430 | 1 | 430 | 0.0 | 843 |
| MS.gene34503.t1 | MTR_3g113970 | 93.287 | 432 | 27 | 1 | 1 | 430 | 1 | 432 | 0.0 | 830 |
| MS.gene34503.t1 | MTR_8g107250 | 91.422 | 443 | 37 | 1 | 1 | 442 | 1 | 443 | 0.0 | 827 |
| MS.gene34503.t1 | MTR_8g098360 | 91.628 | 430 | 36 | 0 | 1 | 430 | 1 | 430 | 0.0 | 818 |
| MS.gene34503.t1 | MTR_8g085980 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 5.91e-124 | 368 |
| MS.gene34503.t1 | MTR_3g110720 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 1.71e-123 | 367 |
| MS.gene34503.t1 | MTR_4g097830 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 6.15e-123 | 365 |
| MS.gene34503.t1 | MTR_1g106005 | 41.244 | 434 | 245 | 2 | 1 | 424 | 1 | 434 | 7.79e-122 | 362 |
| MS.gene34503.t1 | MTR_6g029190 | 40.402 | 448 | 256 | 2 | 1 | 437 | 1 | 448 | 1.04e-121 | 362 |
| MS.gene34503.t1 | MTR_7g085800 | 40.553 | 434 | 248 | 2 | 1 | 424 | 1 | 434 | 1.15e-121 | 362 |
| MS.gene34503.t1 | MTR_2g041670 | 36.807 | 451 | 272 | 4 | 1 | 442 | 1 | 447 | 1.07e-98 | 304 |
| MS.gene34503.t1 | MTR_7g117050 | 35.160 | 438 | 267 | 7 | 2 | 423 | 3 | 439 | 9.72e-97 | 299 |
| MS.gene34503.t1 | MTR_2g041400 | 37.002 | 427 | 256 | 4 | 1 | 418 | 1 | 423 | 8.14e-95 | 292 |
| MS.gene34503.t1 | MTR_3g063410 | 33.784 | 148 | 90 | 1 | 256 | 395 | 30 | 177 | 3.75e-28 | 110 |
| MS.gene34503.t1 | MTR_3g063410 | 31.852 | 135 | 84 | 1 | 269 | 395 | 4 | 138 | 3.98e-21 | 90.1 |
| MS.gene34503.t1 | MTR_4g093670 | 82.759 | 29 | 5 | 0 | 377 | 405 | 1 | 29 | 8.20e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34503.t1 | AT5G23860 | 98.218 | 449 | 7 | 1 | 1 | 448 | 1 | 449 | 0.0 | 927 |
| MS.gene34503.t1 | AT5G23860 | 98.218 | 449 | 7 | 1 | 1 | 448 | 1 | 449 | 0.0 | 927 |
| MS.gene34503.t1 | AT5G62700 | 97.105 | 449 | 11 | 2 | 1 | 448 | 1 | 448 | 0.0 | 915 |
| MS.gene34503.t1 | AT5G62690 | 97.105 | 449 | 11 | 2 | 1 | 448 | 1 | 448 | 0.0 | 915 |
| MS.gene34503.t1 | AT2G29550 | 96.752 | 431 | 14 | 0 | 1 | 431 | 1 | 431 | 0.0 | 855 |
| MS.gene34503.t1 | AT5G12250 | 96.977 | 430 | 13 | 0 | 1 | 430 | 1 | 430 | 0.0 | 854 |
| MS.gene34503.t1 | AT1G75780 | 94.200 | 431 | 24 | 1 | 1 | 430 | 1 | 431 | 0.0 | 838 |
| MS.gene34503.t1 | AT1G20010 | 93.735 | 431 | 26 | 1 | 1 | 430 | 1 | 431 | 0.0 | 835 |
| MS.gene34503.t1 | AT4G20890 | 93.488 | 430 | 28 | 0 | 1 | 430 | 1 | 430 | 0.0 | 829 |
| MS.gene34503.t1 | AT5G44340 | 92.558 | 430 | 32 | 0 | 1 | 430 | 1 | 430 | 0.0 | 823 |
| MS.gene34503.t1 | AT5G19780 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 3.80e-124 | 368 |
| MS.gene34503.t1 | AT5G19770 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 3.80e-124 | 368 |
| MS.gene34503.t1 | AT1G64740 | 41.014 | 434 | 246 | 2 | 1 | 424 | 1 | 434 | 1.29e-123 | 367 |
| MS.gene34503.t1 | AT4G14960 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 2.13e-122 | 364 |
| MS.gene34503.t1 | AT1G04820 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 1.45e-121 | 362 |
| MS.gene34503.t1 | AT1G50010 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 1.45e-121 | 362 |
| MS.gene34503.t1 | AT4G14960 | 41.710 | 386 | 215 | 2 | 1 | 376 | 1 | 386 | 9.13e-103 | 313 |
| MS.gene34503.t1 | AT3G61650 | 35.388 | 438 | 266 | 7 | 2 | 423 | 3 | 439 | 5.00e-97 | 300 |
| MS.gene34503.t1 | AT5G05620 | 35.388 | 438 | 266 | 7 | 2 | 423 | 3 | 439 | 5.17e-97 | 300 |
Find 132 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTGGAGTAGTGAGTTTA+AGG | 0.176825 | 1.4:+78104432 | None:intergenic |
| CCCTCGTTTGCATTTCTTCA+TGG | 0.183235 | 1.4:-78104165 | MS.gene34503:CDS |
| GCACACAACTTCCCAGAATT+TGG | 0.196817 | 1.4:+78106104 | None:intergenic |
| ACCAAATCGGAGCCAAATTC+TGG | 0.224594 | 1.4:-78106116 | MS.gene34503:CDS |
| GCTTTCTTGCATTGGTATAC+TGG | 0.248415 | 1.4:-78103768 | MS.gene34503:CDS |
| ACCTTTCGCCCAGTTGTTTC+CGG | 0.265804 | 1.4:+78105867 | None:intergenic |
| CGGCCTGATAACTTCGTCTT+TGG | 0.273503 | 1.4:-78105901 | MS.gene34503:CDS |
| CTTGGTGGTGGTACTGGTTC+TGG | 0.275474 | 1.4:-78104659 | MS.gene34503:CDS |
| TGGTAACTCCACATCTATTC+AGG | 0.284386 | 1.4:-78103841 | MS.gene34503:CDS |
| GAACTCAGATCTTCGCAAAT+TGG | 0.295990 | 1.4:-78104207 | MS.gene34503:CDS |
| CCCGCCAACTGGTCTTAAAA+TGG | 0.306035 | 1.4:-78103877 | MS.gene34503:CDS |
| AGATGAGGAGGAAGAAGTTC+AGG | 0.309205 | 1.4:-78103631 | MS.gene34503:CDS |
| CACTCCCTTGGTGGTGGTAC+TGG | 0.316198 | 1.4:-78104665 | MS.gene34503:CDS |
| CATCTATTCAGGAGATGTTT+AGG | 0.317382 | 1.4:-78103830 | MS.gene34503:CDS |
| CGCCCAGTTGTTTCCGGCAC+CGG | 0.324024 | 1.4:+78105873 | None:intergenic |
| CAGTAGCATCTTGGTATTGC+TGG | 0.336251 | 1.4:+78103679 | None:intergenic |
| GGATCTGGAGCCAGGGACTA+TGG | 0.340774 | 1.4:-78105959 | MS.gene34503:CDS |
| GACAGTGGATTTCACATTGT+TGG | 0.341115 | 1.4:+78103908 | None:intergenic |
| TCTTCGAATCCCACATCTGC+TGG | 0.346684 | 1.4:+78104075 | None:intergenic |
| GTTCTCATGGATCTGGAGCC+AGG | 0.354959 | 1.4:-78105967 | MS.gene34503:CDS |
| CCCAGAATTTGGCTCCGATT+TGG | 0.356984 | 1.4:+78106115 | None:intergenic |
| GGTGGTACTGGTTCTGGAAT+GGG | 0.369152 | 1.4:-78104653 | MS.gene34503:CDS |
| TCATTGTGGCCGAAATTAGA+TGG | 0.369833 | 1.4:+78104267 | None:intergenic |
| AGTCCGGTGCCGGAAACAAC+TGG | 0.370377 | 1.4:-78105876 | MS.gene34503:CDS |
| GAGAATTGTGATTGTCTTCA+AGG | 0.384367 | 1.4:-78105784 | MS.gene34503:intron |
| AGATCTGAACCATCTAATTT+CGG | 0.387444 | 1.4:-78104276 | MS.gene34503:CDS |
| TGTCCAAAGACGAAGTTATC+AGG | 0.391751 | 1.4:+78105898 | None:intergenic |
| TGCTGATGAATGCATGGTTC+TGG | 0.393880 | 1.4:-78104489 | MS.gene34503:CDS |
| ACAGTGGATTTCACATTGTT+GGG | 0.397830 | 1.4:+78103909 | None:intergenic |
| GGTTCCCGCATTGTCCTCCT+TGG | 0.410215 | 1.4:+78106136 | None:intergenic |
| TAGAGCTGTTCTCATGGATC+TGG | 0.416476 | 1.4:-78105974 | MS.gene34503:CDS |
| CAGGTTTGCCACTCCCTTGG+TGG | 0.418895 | 1.4:-78104674 | MS.gene34503:CDS |
| CGTTTGCATTTCTTCATGGT+GGG | 0.424005 | 1.4:-78104161 | MS.gene34503:CDS |
| TTTCAGGTTTGCCACTCCCT+TGG | 0.428262 | 1.4:-78104677 | MS.gene34503:CDS |
| GTTGTTCCCTTGGTACCTTC+CGG | 0.430541 | 1.4:+78106059 | None:intergenic |
| GTTGAAGATCGTTGTTCCCT+TGG | 0.430648 | 1.4:+78106049 | None:intergenic |
| GTCTGTGATATCCCGCCAAC+TGG | 0.432545 | 1.4:-78103888 | MS.gene34503:CDS |
| TGGTGGTACTGGTTCTGGAA+TGG | 0.433580 | 1.4:-78104654 | MS.gene34503:CDS |
| AAAGTAAGCATCATTCGATC+AGG | 0.435587 | 1.4:+78104596 | None:intergenic |
| GTAGAAAAGCTTTCTTGCAT+TGG | 0.442451 | 1.4:-78103776 | MS.gene34503:CDS |
| CTCGTGGTTCACAGCAGTAC+AGG | 0.444979 | 1.4:-78104121 | MS.gene34503:CDS |
| GCTTGGAGTAGTGAGTTTAA+GGG | 0.448732 | 1.4:+78104433 | None:intergenic |
| ATTCGGTGCTTGATGTTGTT+AGG | 0.449556 | 1.4:-78105816 | MS.gene34503:CDS |
| GTCTTTGGACAGTCCGGTGC+CGG | 0.454398 | 1.4:-78105886 | MS.gene34503:CDS |
| ACATGTTGTCTTCGATTCCC+TGG | 0.455659 | 1.4:-78104236 | MS.gene34503:CDS |
| AACTTCGTCTTTGGACAGTC+CGG | 0.467613 | 1.4:-78105892 | MS.gene34503:CDS |
| CACATCTGCTGGGTCAGCTC+AGG | 0.473481 | 1.4:+78104086 | None:intergenic |
| CTCCGTGTTCCCATCTCCTA+AGG | 0.475795 | 1.4:-78104573 | MS.gene34503:CDS |
| CTTCATCTGCAGTAGCATCT+TGG | 0.477927 | 1.4:+78103670 | None:intergenic |
| CGTTCCTAGAGCTGTTCTCA+TGG | 0.485327 | 1.4:-78105980 | MS.gene34503:CDS |
| CCAAATCGGAGCCAAATTCT+GGG | 0.486989 | 1.4:-78106115 | MS.gene34503:CDS |
| CATCTGCTCATCAACCTCCT+TGG | 0.489308 | 1.4:+78103977 | None:intergenic |
| TGGAGAGGGTATGGATGAGA+TGG | 0.489491 | 1.4:-78103748 | MS.gene34503:CDS |
| TTGGTATACTGGAGAGGGTA+TGG | 0.494465 | 1.4:-78103757 | MS.gene34503:CDS |
| ACTATGGACAGCGTCAGATC+TGG | 0.497511 | 1.4:-78105943 | MS.gene34503:CDS |
| GTTTGCCACTCCCTTGGTGG+TGG | 0.498542 | 1.4:-78104671 | MS.gene34503:CDS |
| TTCTCATGGATCTGGAGCCA+GGG | 0.504140 | 1.4:-78105966 | MS.gene34503:CDS |
| GTGTCAGATACCTTAGGAGA+TGG | 0.506140 | 1.4:+78104563 | None:intergenic |
| GAAGTTGTGTGCGCTGAGCA+CGG | 0.506720 | 1.4:-78106093 | MS.gene34503:CDS |
| GGACAATGCGGGAACCAAAT+CGG | 0.507915 | 1.4:-78106129 | MS.gene34503:CDS |
| CTGAGCTGACCCAGCAGATG+TGG | 0.508297 | 1.4:-78104085 | MS.gene34503:CDS |
| ACAGAGAGTGTAGCGTTGTA+AGG | 0.511785 | 1.4:+78104530 | None:intergenic |
| AGGAGCTGAGTTGATTGATT+CGG | 0.521449 | 1.4:-78105833 | MS.gene34503:CDS |
| ATTCATCATACTTTGTTGAG+TGG | 0.522858 | 1.4:-78103935 | MS.gene34503:CDS |
| GTCAAATAACGACCGTGGCG+AGG | 0.525061 | 1.4:+78104032 | None:intergenic |
| TGAGGAGGAAGAAGTTCAGG+AGG | 0.525475 | 1.4:-78103628 | MS.gene34503:CDS |
| TTGCATTGGTATACTGGAGA+GGG | 0.526307 | 1.4:-78103762 | MS.gene34503:CDS |
| GGGGTATGACTATGAAGATG+AGG | 0.526329 | 1.4:-78103646 | MS.gene34503:CDS |
| GGCCGGAAAATCTGACCGTA+TGG | 0.526703 | 1.4:+78105919 | None:intergenic |
| CATCAGCATTCTCAACAAGT+TGG | 0.528768 | 1.4:+78104504 | None:intergenic |
| AGATCTGAGTTCAATTGACC+AGG | 0.531971 | 1.4:+78104218 | None:intergenic |
| CTTCGAATCCCACATCTGCT+GGG | 0.532809 | 1.4:+78104076 | None:intergenic |
| ACAACAGTGTCAGATACCTT+AGG | 0.533881 | 1.4:+78104557 | None:intergenic |
| TCGTTTGCATTTCTTCATGG+TGG | 0.534932 | 1.4:-78104162 | MS.gene34503:CDS |
| AAGAAATGCAAACGAGGGAA+AGG | 0.537226 | 1.4:+78104170 | None:intergenic |
| GGTGCTTGATGTTGTTAGGA+AGG | 0.544190 | 1.4:-78105812 | MS.gene34503:CDS |
| AAGTTGTGTGCGCTGAGCAC+GGG | 0.549539 | 1.4:-78106092 | MS.gene34503:CDS |
| TACTACAACGAAGCGAGTTG+TGG | 0.552610 | 1.4:-78106009 | MS.gene34503:CDS |
| GAGGGTGAGTGAGCAATTCA+CGG | 0.553083 | 1.4:-78103808 | MS.gene34503:CDS |
| GCCGGAAACAACTGGGCGAA+AGG | 0.556278 | 1.4:-78105868 | MS.gene34503:CDS |
| AGCGTCAGATCTGGTCCATA+CGG | 0.561086 | 1.4:-78105934 | MS.gene34503:CDS |
| GAGTAGTGAGTTTAAGGGTG+CGG | 0.561131 | 1.4:+78104438 | None:intergenic |
| AGATGCTACTGCAGATGAAG+AGG | 0.562679 | 1.4:-78103667 | MS.gene34503:CDS |
| ACATCCAAGGAGGACAATGC+GGG | 0.563147 | 1.4:-78106140 | MS.gene34503:CDS |
| CTTGCATTGGTATACTGGAG+AGG | 0.565550 | 1.4:-78103763 | MS.gene34503:CDS |
| CTAATTTCGGCCACAATGAG+TGG | 0.567054 | 1.4:-78104263 | MS.gene34503:CDS |
| AGATCCATGAGAACAGCTCT+AGG | 0.569536 | 1.4:+78105976 | None:intergenic |
| CTATTCAGGAGATGTTTAGG+AGG | 0.571191 | 1.4:-78103827 | MS.gene34503:CDS |
| CTGACGCTGTCCATAGTCCC+TGG | 0.571304 | 1.4:+78105949 | None:intergenic |
| GTATGACTATGAAGATGAGG+AGG | 0.571612 | 1.4:-78103643 | MS.gene34503:CDS |
| CAGCATTCTCAACAAGTTGG+TGG | 0.573199 | 1.4:+78104507 | None:intergenic |
| TTTGCCCCACTCACTTCTCG+TGG | 0.577800 | 1.4:-78104137 | MS.gene34503:CDS |
| TCGTGGTTCACAGCAGTACA+GGG | 0.585028 | 1.4:-78104120 | MS.gene34503:CDS |
| GAGCACGGGATCGACTCCAC+CGG | 0.585627 | 1.4:-78106078 | MS.gene34503:CDS |
| CGTGAGATTCTTCACATCCA+AGG | 0.593333 | 1.4:-78106153 | MS.gene34503:CDS |
| GATGCTACTGCAGATGAAGA+GGG | 0.594540 | 1.4:-78103666 | MS.gene34503:CDS |
| CAGTACCACCACCAAGGGAG+TGG | 0.594965 | 1.4:+78104666 | None:intergenic |
| GACTCCACCGGAAGGTACCA+AGG | 0.596275 | 1.4:-78106066 | MS.gene34503:CDS |
| GTCCGGTGCCGGAAACAACT+GGG | 0.596726 | 1.4:-78105875 | MS.gene34503:CDS |
| TGCGCTGCTGATCCTCGCCA+CGG | 0.597098 | 1.4:-78104044 | MS.gene34503:CDS |
| TACCTTAGGAGATGGGAACA+CGG | 0.597343 | 1.4:+78104571 | None:intergenic |
| AAACATCTCCTGAATAGATG+TGG | 0.598080 | 1.4:+78103833 | None:intergenic |
| ACAGCATCTGCCATGTTCCG+TGG | 0.598969 | 1.4:-78104011 | MS.gene34503:CDS |
| TGTCAGATACCTTAGGAGAT+GGG | 0.602090 | 1.4:+78104564 | None:intergenic |
| CAAAGACGAAGTTATCAGGC+CGG | 0.603665 | 1.4:+78105902 | None:intergenic |
| ACATGTAACACCACTCATTG+TGG | 0.605465 | 1.4:+78104253 | None:intergenic |
| GTTCCCTTGGTACCTTCCGG+TGG | 0.611432 | 1.4:+78106062 | None:intergenic |
| AGAACCAGTACCACCACCAA+GGG | 0.618252 | 1.4:+78104661 | None:intergenic |
| TATTCAGGAGATGTTTAGGA+GGG | 0.623258 | 1.4:-78103826 | MS.gene34503:CDS |
| CACATCCAAGGAGGACAATG+CGG | 0.623605 | 1.4:-78106141 | MS.gene34503:CDS |
| TGAGCTGACCCAGCAGATGT+GGG | 0.624406 | 1.4:-78104084 | MS.gene34503:CDS |
| AAGTAAGCATCATTCGATCA+GGG | 0.636592 | 1.4:+78104597 | None:intergenic |
| ACCATGAAGAAATGCAAACG+AGG | 0.637063 | 1.4:+78104164 | None:intergenic |
| TGAGAATGCTGATGAATGCA+TGG | 0.647401 | 1.4:-78104495 | MS.gene34503:CDS |
| GCTTGATGTTGTTAGGAAGG+AGG | 0.649257 | 1.4:-78105809 | MS.gene34503:CDS |
| GCGAAAGGTCACTACACTGA+AGG | 0.656934 | 1.4:-78105853 | MS.gene34503:CDS |
| GTGAACCACGAGAAGTGAGT+GGG | 0.660953 | 1.4:+78104132 | None:intergenic |
| TGGCGGGATATCACAGACAG+TGG | 0.662431 | 1.4:+78103893 | None:intergenic |
| CCATGAAGAAATGCAAACGA+GGG | 0.665875 | 1.4:+78104165 | None:intergenic |
| ACGGGATCGACTCCACCGGA+AGG | 0.666784 | 1.4:-78106074 | MS.gene34503:CDS |
| TTTGATTTCTAAAATCAGGG+AGG | 0.671547 | 1.4:-78104624 | MS.gene34503:CDS |
| CAGAACCAGTACCACCACCA+AGG | 0.675091 | 1.4:+78104660 | None:intergenic |
| ATGCTACTGCAGATGAAGAG+GGG | 0.676889 | 1.4:-78103665 | MS.gene34503:CDS |
| TGTGAACCACGAGAAGTGAG+TGG | 0.677800 | 1.4:+78104131 | None:intergenic |
| ACTCCACCGGAAGGTACCAA+GGG | 0.680036 | 1.4:-78106065 | MS.gene34503:CDS |
| GATCTGAGTTCAATTGACCA+GGG | 0.680125 | 1.4:+78104219 | None:intergenic |
| TGGTAAAATGAGCACCAAGG+AGG | 0.701716 | 1.4:-78103991 | MS.gene34503:CDS |
| TGAACCACGAGAAGTGAGTG+GGG | 0.716024 | 1.4:+78104133 | None:intergenic |
| ATGCTGTCAAATAACGACCG+TGG | 0.720715 | 1.4:+78104027 | None:intergenic |
| ATTGCTGGTACTCTGAGACA+AGG | 0.726640 | 1.4:+78103694 | None:intergenic |
| CCGTGGTAAAATGAGCACCA+AGG | 0.726764 | 1.4:-78103994 | MS.gene34503:CDS |
| GAGATTCTTCACATCCAAGG+AGG | 0.735981 | 1.4:-78106150 | MS.gene34503:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACTTGTATAACTAATT+AGG | - | chr1.4:78104697-78104716 | MS.gene34503:intron | 15.0% |
| !!! | ATTAGTTATACAAGTTTTTA+AGG | + | chr1.4:78104696-78104715 | None:intergenic | 15.0% |
| !! | AAGTAAACAAAACAAAACAA+AGG | + | chr1.4:78105035-78105054 | None:intergenic | 20.0% |
| !! | ATTATTAGCAAAAACTTAAC+AGG | + | chr1.4:78105395-78105414 | None:intergenic | 20.0% |
| !! | TATTACTAACACTTCAAAAT+GGG | + | chr1.4:78104469-78104488 | None:intergenic | 20.0% |
| !! | TTATTACTAACACTTCAAAA+TGG | + | chr1.4:78104470-78104489 | None:intergenic | 20.0% |
| !!! | ACTTTTGATTTCTAAAATCA+GGG | - | chr1.4:78105146-78105165 | MS.gene34503:intron | 20.0% |
| !!! | TGTTTTGTTTACTTGAATTT+GGG | - | chr1.4:78105041-78105060 | MS.gene34503:intron | 20.0% |
| !!! | TTGATAATCAGATTTGATAT+GGG | - | chr1.4:78104735-78104754 | MS.gene34503:intron | 20.0% |
| !!! | TTGTTTTGTTTACTTGAATT+TGG | - | chr1.4:78105040-78105059 | MS.gene34503:intron | 20.0% |
| ! | AAACAATTAGAAGCAGAAAT+CGG | + | chr1.4:78104026-78104045 | None:intergenic | 25.0% |
| ! | TCTATGTGTTGTGATAAATT+AGG | - | chr1.4:78104909-78104928 | MS.gene34503:intron | 25.0% |
| ! | TTAGAAGTTGTGATATAACT+TGG | - | chr1.4:78104976-78104995 | MS.gene34503:intron | 25.0% |
| !! | ATTTGAAGTGCTATAGTAAT+AGG | - | chr1.4:78104787-78104806 | MS.gene34503:intron | 25.0% |
| !!! | AAAATGGCTTCTACTTTTAT+TGG | - | chr1.4:78105912-78105931 | MS.gene34503:CDS | 25.0% |
| !!! | CACTTTTGATTTCTAAAATC+AGG | - | chr1.4:78105145-78105164 | MS.gene34503:intron | 25.0% |
| !!! | GTTGATAATCAGATTTGATA+TGG | - | chr1.4:78104734-78104753 | MS.gene34503:intron | 25.0% |
| AAACTTAACAGGCAAAAACA+TGG | + | chr1.4:78105384-78105403 | None:intergenic | 30.0% | |
| AACTTAACAGGCAAAAACAT+GGG | + | chr1.4:78105383-78105402 | None:intergenic | 30.0% | |
| ACAAGTTATTCAAAACACAG+TGG | + | chr1.4:78104855-78104874 | None:intergenic | 30.0% | |
| ACACAAAAATTCCTAGATCA+AGG | + | chr1.4:78104236-78104255 | None:intergenic | 30.0% | |
| AGATCTGAACCATCTAATTT+CGG | - | chr1.4:78105497-78105516 | MS.gene34503:intron | 30.0% | |
| ATTCATCATACTTTGTTGAG+TGG | - | chr1.4:78105838-78105857 | MS.gene34503:CDS | 30.0% | |
| ! | AATGCAAGAAAGCTTTTCTA+CGG | + | chr1.4:78105998-78106017 | None:intergenic | 30.0% |
| ! | TGAATTTGGGATTTCTAACA+TGG | - | chr1.4:78105054-78105073 | MS.gene34503:intron | 30.0% |
| ! | TTAGTATGTAAGAGCATGTT+TGG | - | chr1.4:78104884-78104903 | MS.gene34503:intron | 30.0% |
| !! | TTTGATTTCTAAAATCAGGG+AGG | - | chr1.4:78105149-78105168 | MS.gene34503:intron | 30.0% |
| AAACATCTCCTGAATAGATG+TGG | + | chr1.4:78105943-78105962 | None:intergenic | 35.0% | |
| AAAGTAAGCATCATTCGATC+AGG | + | chr1.4:78105180-78105199 | None:intergenic | 35.0% | |
| AAGTAAGCATCATTCGATCA+GGG | + | chr1.4:78105179-78105198 | None:intergenic | 35.0% | |
| AATCAGATTTGATATGGGAG+TGG | - | chr1.4:78104740-78104759 | MS.gene34503:intron | 35.0% | |
| ATTATGATGAACTCACAGCT+TGG | + | chr1.4:78105360-78105379 | None:intergenic | 35.0% | |
| CATCTATTCAGGAGATGTTT+AGG | - | chr1.4:78105943-78105962 | MS.gene34503:CDS | 35.0% | |
| GAGAATTGTGATTGTCTTCA+AGG | - | chr1.4:78103989-78104008 | MS.gene34503:CDS | 35.0% | |
| GTAGAAAAGCTTTCTTGCAT+TGG | - | chr1.4:78105997-78106016 | MS.gene34503:CDS | 35.0% | |
| TATTCAGGAGATGTTTAGGA+GGG | - | chr1.4:78105947-78105966 | MS.gene34503:CDS | 35.0% | |
| TGATATAACTTGGACGTGTA+TGG | - | chr1.4:78104986-78105005 | MS.gene34503:intron | 35.0% | |
| ! | AAATTGAGCCTTGTGTTGTT+TGG | - | chr1.4:78105464-78105483 | MS.gene34503:intron | 35.0% |
| ! | ACAGTGGATTTCACATTGTT+GGG | + | chr1.4:78105867-78105886 | None:intergenic | 35.0% |
| ! | CATGGTTTTCAGAATCTTTC+AGG | - | chr1.4:78105072-78105091 | MS.gene34503:intron | 35.0% |
| !!! | AGAGTTTTGAACCTTGATCT+AGG | - | chr1.4:78104535-78104554 | MS.gene34503:CDS | 35.0% |
| !!! | TCAGAATCTTTCAGGTTTTC+AGG | - | chr1.4:78105080-78105099 | MS.gene34503:intron | 35.0% |
| AACTGCAACCAAACAACACA+AGG | + | chr1.4:78105475-78105494 | None:intergenic | 40.0% | |
| AAGAAATGCAAACGAGGGAA+AGG | + | chr1.4:78105606-78105625 | None:intergenic | 40.0% | |
| ACAACAGTGTCAGATACCTT+AGG | + | chr1.4:78105219-78105238 | None:intergenic | 40.0% | |
| ACATGTAACACCACTCATTG+TGG | + | chr1.4:78105523-78105542 | None:intergenic | 40.0% | |
| ACCATGAAGAAATGCAAACG+AGG | + | chr1.4:78105612-78105631 | None:intergenic | 40.0% | |
| AGATCTGAGTTCAATTGACC+AGG | + | chr1.4:78105558-78105577 | None:intergenic | 40.0% | |
| AGCTTGGAGTAGTGAGTTTA+AGG | + | chr1.4:78105344-78105363 | None:intergenic | 40.0% | |
| CATCAGCATTCTCAACAAGT+TGG | + | chr1.4:78105272-78105291 | None:intergenic | 40.0% | |
| CCATGAAGAAATGCAAACGA+GGG | + | chr1.4:78105611-78105630 | None:intergenic | 40.0% | |
| CGTTTGCATTTCTTCATGGT+GGG | - | chr1.4:78105612-78105631 | MS.gene34503:intron | 40.0% | |
| CTATTCAGGAGATGTTTAGG+AGG | - | chr1.4:78105946-78105965 | MS.gene34503:CDS | 40.0% | |
| GAACTCAGATCTTCGCAAAT+TGG | - | chr1.4:78105566-78105585 | MS.gene34503:intron | 40.0% | |
| GATCTGAGTTCAATTGACCA+GGG | + | chr1.4:78105557-78105576 | None:intergenic | 40.0% | |
| GCACAGAAATTCCTAGATCA+AGG | + | chr1.4:78104549-78104568 | None:intergenic | 40.0% | |
| GCTTGGAGTAGTGAGTTTAA+GGG | + | chr1.4:78105343-78105362 | None:intergenic | 40.0% | |
| GTATGACTATGAAGATGAGG+AGG | - | chr1.4:78106130-78106149 | MS.gene34503:CDS | 40.0% | |
| TCATTGTGGCCGAAATTAGA+TGG | + | chr1.4:78105509-78105528 | None:intergenic | 40.0% | |
| TCGTTTGCATTTCTTCATGG+TGG | - | chr1.4:78105611-78105630 | MS.gene34503:intron | 40.0% | |
| TGAGAATGCTGATGAATGCA+TGG | - | chr1.4:78105278-78105297 | MS.gene34503:intron | 40.0% | |
| TGGTAACTCCACATCTATTC+AGG | - | chr1.4:78105932-78105951 | MS.gene34503:CDS | 40.0% | |
| TGTCAGATACCTTAGGAGAT+GGG | + | chr1.4:78105212-78105231 | None:intergenic | 40.0% | |
| TGTCCAAAGACGAAGTTATC+AGG | + | chr1.4:78103878-78103897 | None:intergenic | 40.0% | |
| ! | GAAAGCTTTTCTACGGAACA+TGG | + | chr1.4:78105991-78106010 | None:intergenic | 40.0% |
| ! | GACAGTGGATTTCACATTGT+TGG | + | chr1.4:78105868-78105887 | None:intergenic | 40.0% |
| ! | GCTTTCTTGCATTGGTATAC+TGG | - | chr1.4:78106005-78106024 | MS.gene34503:CDS | 40.0% |
| ! | TTGCATTGGTATACTGGAGA+GGG | - | chr1.4:78106011-78106030 | MS.gene34503:CDS | 40.0% |
| !! | AGGAGCTGAGTTGATTGATT+CGG | - | chr1.4:78103940-78103959 | MS.gene34503:CDS | 40.0% |
| !! | ATTCGGTGCTTGATGTTGTT+AGG | - | chr1.4:78103957-78103976 | MS.gene34503:CDS | 40.0% |
| !! | TTGTGTTGTTTGGTTGCAGT+TGG | - | chr1.4:78105474-78105493 | MS.gene34503:intron | 40.0% |
| !!! | GAAGCCATTTTAAGACCAGT+TGG | + | chr1.4:78105903-78105922 | None:intergenic | 40.0% |
| AACTTCGTCTTTGGACAGTC+CGG | - | chr1.4:78103881-78103900 | MS.gene34503:CDS | 45.0% | |
| ACATGTTGTCTTCGATTCCC+TGG | - | chr1.4:78105537-78105556 | MS.gene34503:intron | 45.0% | |
| ACCAAATCGGAGCCAAATTC+TGG | - | chr1.4:78103657-78103676 | MS.gene34503:CDS | 45.0% | |
| AGAGAATCGAGCCTTGATCT+AGG | - | chr1.4:78104222-78104241 | MS.gene34503:CDS | 45.0% | |
| AGATCCATGAGAACAGCTCT+AGG | + | chr1.4:78103800-78103819 | None:intergenic | 45.0% | |
| AGATGAGGAGGAAGAAGTTC+AGG | - | chr1.4:78106142-78106161 | MS.gene34503:CDS | 45.0% | |
| AGATGCTACTGCAGATGAAG+AGG | - | chr1.4:78106106-78106125 | MS.gene34503:CDS | 45.0% | |
| ATGCTACTGCAGATGAAGAG+GGG | - | chr1.4:78106108-78106127 | MS.gene34503:CDS | 45.0% | |
| ATGCTGTCAAATAACGACCG+TGG | + | chr1.4:78105749-78105768 | None:intergenic | 45.0% | |
| CAAAGACGAAGTTATCAGGC+CGG | + | chr1.4:78103874-78103893 | None:intergenic | 45.0% | |
| CAGTAGCATCTTGGTATTGC+TGG | + | chr1.4:78106097-78106116 | None:intergenic | 45.0% | |
| CCAAATCGGAGCCAAATTCT+GGG | - | chr1.4:78103658-78103677 | MS.gene34503:CDS | 45.0% | |
| CCCTCGTTTGCATTTCTTCA+TGG | - | chr1.4:78105608-78105627 | MS.gene34503:intron | 45.0% | |
| CGTGAGATTCTTCACATCCA+AGG | - | chr1.4:78103620-78103639 | MS.gene34503:CDS | 45.0% | |
| CTAATTTCGGCCACAATGAG+TGG | - | chr1.4:78105510-78105529 | MS.gene34503:intron | 45.0% | |
| CTTCATCTGCAGTAGCATCT+TGG | + | chr1.4:78106106-78106125 | None:intergenic | 45.0% | |
| GAGATTCTTCACATCCAAGG+AGG | - | chr1.4:78103623-78103642 | MS.gene34503:CDS | 45.0% | |
| GAGTAGTGAGTTTAAGGGTG+CGG | + | chr1.4:78105338-78105357 | None:intergenic | 45.0% | |
| GATGCTACTGCAGATGAAGA+GGG | - | chr1.4:78106107-78106126 | MS.gene34503:CDS | 45.0% | |
| GCACACAACTTCCCAGAATT+TGG | + | chr1.4:78103672-78103691 | None:intergenic | 45.0% | |
| GCTTGATGTTGTTAGGAAGG+AGG | - | chr1.4:78103964-78103983 | MS.gene34503:CDS | 45.0% | |
| GGGGTATGACTATGAAGATG+AGG | - | chr1.4:78106127-78106146 | MS.gene34503:CDS | 45.0% | |
| GGTGCTTGATGTTGTTAGGA+AGG | - | chr1.4:78103961-78103980 | MS.gene34503:CDS | 45.0% | |
| GTGTCAGATACCTTAGGAGA+TGG | + | chr1.4:78105213-78105232 | None:intergenic | 45.0% | |
| GTTGAAGATCGTTGTTCCCT+TGG | + | chr1.4:78103727-78103746 | None:intergenic | 45.0% | |
| TACCTTAGGAGATGGGAACA+CGG | + | chr1.4:78105205-78105224 | None:intergenic | 45.0% | |
| TACTACAACGAAGCGAGTTG+TGG | - | chr1.4:78103764-78103783 | MS.gene34503:CDS | 45.0% | |
| TAGAGCTGTTCTCATGGATC+TGG | - | chr1.4:78103799-78103818 | MS.gene34503:CDS | 45.0% | |
| TGCTGATGAATGCATGGTTC+TGG | - | chr1.4:78105284-78105303 | MS.gene34503:intron | 45.0% | |
| TGGTAAAATGAGCACCAAGG+AGG | - | chr1.4:78105782-78105801 | MS.gene34503:intron | 45.0% | |
| TTGGTATACTGGAGAGGGTA+TGG | - | chr1.4:78106016-78106035 | MS.gene34503:CDS | 45.0% | |
| ! | ACAGAGAGTGTAGCGTTGTA+AGG | + | chr1.4:78105246-78105265 | None:intergenic | 45.0% |
| ! | CAGCATTCTCAACAAGTTGG+TGG | + | chr1.4:78105269-78105288 | None:intergenic | 45.0% |
| ! | CTTGCATTGGTATACTGGAG+AGG | - | chr1.4:78106010-78106029 | MS.gene34503:CDS | 45.0% |
| ! | GCTCATTTTACCACGGAACA+TGG | + | chr1.4:78105775-78105794 | None:intergenic | 45.0% |
| ! | GTCCATACGGTCAGATTTTC+CGG | - | chr1.4:78103852-78103871 | MS.gene34503:CDS | 45.0% |
| !! | ATTGCTGGTACTCTGAGACA+AGG | + | chr1.4:78106082-78106101 | None:intergenic | 45.0% |
| !!! | CCATTTTAAGACCAGTTGGC+GGG | + | chr1.4:78105899-78105918 | None:intergenic | 45.0% |
| !!! | CCTTGGTGCTCATTTTACCA+CGG | + | chr1.4:78105782-78105801 | None:intergenic | 45.0% |
| !!! | GCCATTTTAAGACCAGTTGG+CGG | + | chr1.4:78105900-78105919 | None:intergenic | 45.0% |
| ACATCCAAGGAGGACAATGC+GGG | - | chr1.4:78103633-78103652 | MS.gene34503:CDS | 50.0% | |
| ACTATGGACAGCGTCAGATC+TGG | - | chr1.4:78103830-78103849 | MS.gene34503:CDS | 50.0% | |
| AGAACCAGTACCACCACCAA+GGG | + | chr1.4:78105115-78105134 | None:intergenic | 50.0% | |
| AGCGTCAGATCTGGTCCATA+CGG | - | chr1.4:78103839-78103858 | MS.gene34503:CDS | 50.0% | |
| CACATCCAAGGAGGACAATG+CGG | - | chr1.4:78103632-78103651 | MS.gene34503:CDS | 50.0% | |
| CATCTGCTCATCAACCTCCT+TGG | + | chr1.4:78105799-78105818 | None:intergenic | 50.0% | |
| CCGTGGTAAAATGAGCACCA+AGG | - | chr1.4:78105779-78105798 | MS.gene34503:intron | 50.0% | |
| CGGCCTGATAACTTCGTCTT+TGG | - | chr1.4:78103872-78103891 | MS.gene34503:CDS | 50.0% | |
| CGTTCCTAGAGCTGTTCTCA+TGG | - | chr1.4:78103793-78103812 | MS.gene34503:CDS | 50.0% | |
| CTTCGAATCCCACATCTGCT+GGG | + | chr1.4:78105700-78105719 | None:intergenic | 50.0% | |
| GAGGGTGAGTGAGCAATTCA+CGG | - | chr1.4:78105965-78105984 | MS.gene34503:CDS | 50.0% | |
| GCGAAAGGTCACTACACTGA+AGG | - | chr1.4:78103920-78103939 | MS.gene34503:CDS | 50.0% | |
| GGACAATGCGGGAACCAAAT+CGG | - | chr1.4:78103644-78103663 | MS.gene34503:CDS | 50.0% | |
| GTGAACCACGAGAAGTGAGT+GGG | + | chr1.4:78105644-78105663 | None:intergenic | 50.0% | |
| GTTGTTCCCTTGGTACCTTC+CGG | + | chr1.4:78103717-78103736 | None:intergenic | 50.0% | |
| TCGTGGTTCACAGCAGTACA+GGG | - | chr1.4:78105653-78105672 | MS.gene34503:intron | 50.0% | |
| TCTTCGAATCCCACATCTGC+TGG | + | chr1.4:78105701-78105720 | None:intergenic | 50.0% | |
| TGAACCACGAGAAGTGAGTG+GGG | + | chr1.4:78105643-78105662 | None:intergenic | 50.0% | |
| TGAGGAGGAAGAAGTTCAGG+AGG | - | chr1.4:78106145-78106164 | MS.gene34503:CDS | 50.0% | |
| TGTGAACCACGAGAAGTGAG+TGG | + | chr1.4:78105645-78105664 | None:intergenic | 50.0% | |
| ! | ACCTTTCGCCCAGTTGTTTC+CGG | + | chr1.4:78103909-78103928 | None:intergenic | 50.0% |
| ! | CCCAGAATTTGGCTCCGATT+TGG | + | chr1.4:78103661-78103680 | None:intergenic | 50.0% |
| ! | TGGAGAGGGTATGGATGAGA+TGG | - | chr1.4:78106025-78106044 | MS.gene34503:CDS | 50.0% |
| ! | TTCTCATGGATCTGGAGCCA+GGG | - | chr1.4:78103807-78103826 | MS.gene34503:CDS | 50.0% |
| !! | CCCGCCAACTGGTCTTAAAA+TGG | - | chr1.4:78105896-78105915 | MS.gene34503:CDS | 50.0% |
| !! | GGTGGTACTGGTTCTGGAAT+GGG | - | chr1.4:78105120-78105139 | MS.gene34503:intron | 50.0% |
| !! | TGGTGGTACTGGTTCTGGAA+TGG | - | chr1.4:78105119-78105138 | MS.gene34503:intron | 50.0% |
| !! | TTTCAGGTTTGCCACTCCCT+TGG | - | chr1.4:78105096-78105115 | MS.gene34503:intron | 50.0% |
| AAGTTGTGTGCGCTGAGCAC+GGG | - | chr1.4:78103681-78103700 | MS.gene34503:CDS | 55.0% | |
| ACAGCATCTGCCATGTTCCG+TGG | - | chr1.4:78105762-78105781 | MS.gene34503:intron | 55.0% | |
| CAGAACCAGTACCACCACCA+AGG | + | chr1.4:78105116-78105135 | None:intergenic | 55.0% | |
| CTCCGTGTTCCCATCTCCTA+AGG | - | chr1.4:78105200-78105219 | MS.gene34503:intron | 55.0% | |
| CTCGTGGTTCACAGCAGTAC+AGG | - | chr1.4:78105652-78105671 | MS.gene34503:intron | 55.0% | |
| GAAGTTGTGTGCGCTGAGCA+CGG | - | chr1.4:78103680-78103699 | MS.gene34503:CDS | 55.0% | |
| GGCCGGAAAATCTGACCGTA+TGG | + | chr1.4:78103857-78103876 | None:intergenic | 55.0% | |
| GTCAAATAACGACCGTGGCG+AGG | + | chr1.4:78105744-78105763 | None:intergenic | 55.0% | |
| GTCTGTGATATCCCGCCAAC+TGG | - | chr1.4:78105885-78105904 | MS.gene34503:CDS | 55.0% | |
| TGAGCTGACCCAGCAGATGT+GGG | - | chr1.4:78105689-78105708 | MS.gene34503:intron | 55.0% | |
| TGGCGGGATATCACAGACAG+TGG | + | chr1.4:78105883-78105902 | None:intergenic | 55.0% | |
| TTTGCCCCACTCACTTCTCG+TGG | - | chr1.4:78105636-78105655 | MS.gene34503:intron | 55.0% | |
| ! | GTTCTCATGGATCTGGAGCC+AGG | - | chr1.4:78103806-78103825 | MS.gene34503:CDS | 55.0% |
| !! | ACTCCACCGGAAGGTACCAA+GGG | - | chr1.4:78103708-78103727 | MS.gene34503:CDS | 55.0% |
| !! | CTTGGTGGTGGTACTGGTTC+TGG | - | chr1.4:78105114-78105133 | MS.gene34503:intron | 55.0% |
| CACATCTGCTGGGTCAGCTC+AGG | + | chr1.4:78105690-78105709 | None:intergenic | 60.0% | |
| CAGGTTTGCCACTCCCTTGG+TGG | - | chr1.4:78105099-78105118 | MS.gene34503:intron | 60.0% | |
| CAGTACCACCACCAAGGGAG+TGG | + | chr1.4:78105110-78105129 | None:intergenic | 60.0% | |
| CTGACGCTGTCCATAGTCCC+TGG | + | chr1.4:78103827-78103846 | None:intergenic | 60.0% | |
| CTGAGCTGACCCAGCAGATG+TGG | - | chr1.4:78105688-78105707 | MS.gene34503:intron | 60.0% | |
| GCCGGAAACAACTGGGCGAA+AGG | - | chr1.4:78103905-78103924 | MS.gene34503:CDS | 60.0% | |
| GGTTCCCGCATTGTCCTCCT+TGG | + | chr1.4:78103640-78103659 | None:intergenic | 60.0% | |
| GTCTTTGGACAGTCCGGTGC+CGG | - | chr1.4:78103887-78103906 | MS.gene34503:CDS | 60.0% | |
| GTTCCCTTGGTACCTTCCGG+TGG | + | chr1.4:78103714-78103733 | None:intergenic | 60.0% | |
| GTTTGCCACTCCCTTGGTGG+TGG | - | chr1.4:78105102-78105121 | MS.gene34503:intron | 60.0% | |
| ! | AGTCCGGTGCCGGAAACAAC+TGG | - | chr1.4:78103897-78103916 | MS.gene34503:CDS | 60.0% |
| ! | GGATCTGGAGCCAGGGACTA+TGG | - | chr1.4:78103814-78103833 | MS.gene34503:CDS | 60.0% |
| ! | GTCCGGTGCCGGAAACAACT+GGG | - | chr1.4:78103898-78103917 | MS.gene34503:CDS | 60.0% |
| !! | CACTCCCTTGGTGGTGGTAC+TGG | - | chr1.4:78105108-78105127 | MS.gene34503:intron | 60.0% |
| !! | GACTCCACCGGAAGGTACCA+AGG | - | chr1.4:78103707-78103726 | MS.gene34503:CDS | 60.0% |
| TGCGCTGCTGATCCTCGCCA+CGG | - | chr1.4:78105729-78105748 | MS.gene34503:intron | 65.0% | |
| ! | ACGGGATCGACTCCACCGGA+AGG | - | chr1.4:78103699-78103718 | MS.gene34503:CDS | 65.0% |
| ! | CGCCCAGTTGTTTCCGGCAC+CGG | + | chr1.4:78103903-78103922 | None:intergenic | 65.0% |
| ! | GAGCACGGGATCGACTCCAC+CGG | - | chr1.4:78103695-78103714 | MS.gene34503:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 78103617 | 78106178 | 78103617 | ID=MS.gene34503 |
| chr1.4 | mRNA | 78103617 | 78106178 | 78103617 | ID=MS.gene34503.t1;Parent=MS.gene34503 |
| chr1.4 | exon | 78105785 | 78106178 | 78105785 | ID=MS.gene34503.t1.exon1;Parent=MS.gene34503.t1 |
| chr1.4 | CDS | 78105785 | 78106178 | 78105785 | ID=cds.MS.gene34503.t1;Parent=MS.gene34503.t1 |
| chr1.4 | exon | 78104432 | 78104701 | 78104432 | ID=MS.gene34503.t1.exon2;Parent=MS.gene34503.t1 |
| chr1.4 | CDS | 78104432 | 78104701 | 78104432 | ID=cds.MS.gene34503.t1;Parent=MS.gene34503.t1 |
| chr1.4 | exon | 78103617 | 78104302 | 78103617 | ID=MS.gene34503.t1.exon3;Parent=MS.gene34503.t1 |
| chr1.4 | CDS | 78103617 | 78104302 | 78103617 | ID=cds.MS.gene34503.t1;Parent=MS.gene34503.t1 |
| Gene Sequence |
| Protein sequence |
