Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029335.t1 | GAU17992.1 | 95.9 | 508 | 20 | 1 | 1 | 508 | 1 | 507 | 8.30E-249 | 869.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029335.t1 | Q93Y22 | 74.7 | 510 | 121 | 5 | 1 | 508 | 24 | 527 | 7.0e-196 | 684.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029335.t1 | A0A2Z6LJY3 | 95.9 | 508 | 20 | 1 | 1 | 508 | 1 | 507 | 6.0e-249 | 869.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034150 | MS.gene029335 | PPI |
| MS.gene053143 | MS.gene029335 | PPI |
| MS.gene02789 | MS.gene029335 | PPI |
| MS.gene029335 | MS.gene50735 | PPI |
| MS.gene74608 | MS.gene029335 | PPI |
| MS.gene064893 | MS.gene029335 | PPI |
| MS.gene003673 | MS.gene029335 | PPI |
| MS.gene032230 | MS.gene029335 | PPI |
| MS.gene063166 | MS.gene029335 | PPI |
| MS.gene029335 | MS.gene50077 | PPI |
| MS.gene029335 | MS.gene68093 | PPI |
| MS.gene003764 | MS.gene029335 | PPI |
| MS.gene029335 | MS.gene005784 | PPI |
| MS.gene062888 | MS.gene029335 | PPI |
| MS.gene029335 | MS.gene056700 | PPI |
| MS.gene21432 | MS.gene029335 | PPI |
| MS.gene029335 | MS.gene003672 | PPI |
| MS.gene029335 | MS.gene45686 | PPI |
| MS.gene23325 | MS.gene029335 | PPI |
| MS.gene029335 | MS.gene38302 | PPI |
| MS.gene02023 | MS.gene029335 | PPI |
| MS.gene029335 | MS.gene68223 | PPI |
| MS.gene054585 | MS.gene029335 | PPI |
| MS.gene029335 | MS.gene003223 | PPI |
| MS.gene014282 | MS.gene029335 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029335.t1 | MTR_2g101180 | 95.079 | 508 | 25 | 0 | 1 | 508 | 24 | 531 | 0.0 | 986 |
| MS.gene029335.t1 | MTR_1g111910 | 92.424 | 396 | 28 | 2 | 113 | 508 | 1 | 394 | 0.0 | 718 |
| MS.gene029335.t1 | MTR_1g111900 | 87.260 | 416 | 12 | 3 | 93 | 508 | 24 | 398 | 0.0 | 702 |
| MS.gene029335.t1 | MTR_1g111910 | 92.814 | 334 | 23 | 1 | 113 | 446 | 1 | 333 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029335.t1 | AT5G05010 | 74.118 | 510 | 124 | 5 | 1 | 508 | 24 | 527 | 0.0 | 756 |
| MS.gene029335.t1 | AT5G05010 | 74.118 | 510 | 124 | 5 | 1 | 508 | 24 | 527 | 0.0 | 756 |
Find 130 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTTCTTGGTTAAGAATT+TGG | 0.109257 | 1.4:+86026691 | None:intergenic |
| CTGTGTTCTCTGAGCATATT+TGG | 0.189831 | 1.4:+86024025 | None:intergenic |
| CTTGAATATGTCCATCTTCT+TGG | 0.211819 | 1.4:+86026679 | None:intergenic |
| TCTAGCAGTGGAACTGGTTT+TGG | 0.235664 | 1.4:-86027214 | MS.gene029335:CDS |
| TTTGGAAGTGGCTCTGGTTT+TGG | 0.245009 | 1.4:-86027196 | MS.gene029335:CDS |
| AACTGTTGGCCCTCTTCTTC+TGG | 0.278840 | 1.4:-86025125 | MS.gene029335:CDS |
| AATAACTCTTTATTCATGTT+AGG | 0.288485 | 1.4:+86025369 | None:intergenic |
| TCAAGGGAATAAGAATATTC+AGG | 0.290822 | 1.4:+86027647 | None:intergenic |
| GTCCTAGACTGGCCAAGTTT+TGG | 0.298368 | 1.4:+86026828 | None:intergenic |
| TACAAACATCATACCACTTA+AGG | 0.306927 | 1.4:-86024060 | MS.gene029335:CDS |
| TTTCAGAAAGAATACAAGTT+TGG | 0.329519 | 1.4:+86028061 | None:intergenic |
| GAGCAACATACTGGAAGATT+TGG | 0.339702 | 1.4:-86028102 | MS.gene029335:CDS |
| GAAAAGAATAGAGGTGATAA+AGG | 0.356831 | 1.4:-86027304 | MS.gene029335:CDS |
| CCAGATCCCATTGACGTTAA+CGG | 0.360280 | 1.4:+86027271 | None:intergenic |
| TGCCGTAAAACGAACTGAAA+TGG | 0.366753 | 1.4:+86024414 | None:intergenic |
| AGATGGACATATTCAAGTTC+AGG | 0.371232 | 1.4:-86026673 | MS.gene029335:intron |
| GCAGCATTTCCCAAGTTGAT+AGG | 0.371518 | 1.4:-86028221 | MS.gene029335:CDS |
| TTTGATGAAGTCATCTCTCT+TGG | 0.376116 | 1.4:-86027581 | MS.gene029335:CDS |
| CTTTGGTCCGTTAACGTCAA+TGG | 0.381100 | 1.4:-86027278 | MS.gene029335:CDS |
| TGGCTTGATTATCACCAGTT+TGG | 0.383291 | 1.4:+86025409 | None:intergenic |
| TTATGTCAGCATTGAATATG+AGG | 0.408842 | 1.4:-86025093 | MS.gene029335:CDS |
| ACCTTTAGGCTTGGTAGAAA+AGG | 0.412806 | 1.4:+86027150 | None:intergenic |
| ATAACTCTTTATTCATGTTA+GGG | 0.412906 | 1.4:+86025370 | None:intergenic |
| ACCAACACCGGCGGCATCAC+TGG | 0.413982 | 1.4:+86025287 | None:intergenic |
| TGTGTTCTCTGAGCATATTT+GGG | 0.417674 | 1.4:+86024026 | None:intergenic |
| TCTGAGGAATGTTGTGGTTT+CGG | 0.419247 | 1.4:-86025054 | MS.gene029335:CDS |
| GCCAGTGATGCCGCCGGTGT+TGG | 0.419520 | 1.4:-86025288 | MS.gene029335:CDS |
| ATCTGCCACTGCTCCGCCAA+AGG | 0.420373 | 1.4:-86026943 | MS.gene029335:CDS |
| TAAGAATTTGGAGAGACAAT+TGG | 0.421054 | 1.4:+86026703 | None:intergenic |
| AGAGGTGATAAAGGAGGCTT+TGG | 0.422652 | 1.4:-86027295 | MS.gene029335:CDS |
| GTGGGGCAGCTGTCCTAGAC+TGG | 0.429267 | 1.4:+86026817 | None:intergenic |
| CCATCTGTTAGTCAGATTGA+TGG | 0.431274 | 1.4:-86025005 | MS.gene029335:CDS |
| TTTCCCAGTGCCTATCAACT+TGG | 0.434831 | 1.4:+86028211 | None:intergenic |
| AAACAAACAGAGCAACATAC+TGG | 0.436197 | 1.4:-86028111 | MS.gene029335:CDS |
| GACTAACAGATGGTGCTTCT+CGG | 0.439604 | 1.4:+86025015 | None:intergenic |
| CCAGTGGGGAAAGGCCTGTT+GGG | 0.443467 | 1.4:+86025315 | None:intergenic |
| CCGTTAACGTCAATGGGATC+TGG | 0.444335 | 1.4:-86027271 | MS.gene029335:CDS |
| ACTGCTCCGCCAAAGGGTCT+TGG | 0.445125 | 1.4:-86026936 | MS.gene029335:CDS |
| GAAGTTGTTCAGCCAAAACT+TGG | 0.446093 | 1.4:-86026840 | MS.gene029335:CDS |
| AGCATATCTAGCAGTGGAAC+TGG | 0.447231 | 1.4:-86027220 | MS.gene029335:CDS |
| CGAATATATACTAGGTCTAA+AGG | 0.450556 | 1.4:-86025340 | MS.gene029335:CDS |
| TTTCCCAAGTTGATAGGCAC+TGG | 0.451489 | 1.4:-86028215 | MS.gene029335:CDS |
| GCCGTAAAACGAACTGAAAT+GGG | 0.454944 | 1.4:+86024415 | None:intergenic |
| AGCTTCATACCAAGACCCTT+TGG | 0.456960 | 1.4:+86026927 | None:intergenic |
| TCTGCCACTGCTCCGCCAAA+GGG | 0.459753 | 1.4:-86026942 | MS.gene029335:CDS |
| TTTGGTCCGTTAACGTCAAT+GGG | 0.461560 | 1.4:-86027277 | MS.gene029335:CDS |
| GGGAAAGAATGCTGATGAAT+CGG | 0.468736 | 1.4:+86024435 | None:intergenic |
| TTGATGAAGTCATCTCTCTT+GGG | 0.471175 | 1.4:-86027580 | MS.gene029335:CDS |
| GTTCAGATTGAAAAGAATAG+AGG | 0.475721 | 1.4:-86027313 | MS.gene029335:intron |
| GATGGTGCTTCTCGGAGAGC+TGG | 0.477636 | 1.4:+86025023 | None:intergenic |
| CAAATTCTTAACCAAGAAGA+TGG | 0.481738 | 1.4:-86026690 | MS.gene029335:CDS |
| GTTTGTTTGTTACAAGAAGC+AGG | 0.489618 | 1.4:+86028126 | None:intergenic |
| TCCTCAACAGTTAAAGTGAC+CGG | 0.492542 | 1.4:+86026783 | None:intergenic |
| TAGACCTAGTATATATTCGT+TGG | 0.492607 | 1.4:+86025344 | None:intergenic |
| TGACTCTAGGAATTCCATCT+TGG | 0.501538 | 1.4:-86024631 | MS.gene029335:CDS |
| TTAGTCAGATTGATGGAGAA+TGG | 0.504506 | 1.4:-86024998 | MS.gene029335:CDS |
| CAAGGGAATAAGAATATTCA+GGG | 0.504878 | 1.4:+86027648 | None:intergenic |
| ACAAACATCATACCACTTAA+GGG | 0.509720 | 1.4:-86024059 | MS.gene029335:CDS |
| CCCAACAGGCCTTTCCCCAC+TGG | 0.515516 | 1.4:-86025315 | MS.gene029335:CDS |
| TTTCTAATGCAGTCAACTGT+TGG | 0.516277 | 1.4:-86025139 | MS.gene029335:intron |
| TGCAGATACCCTCTTCGTCA+AGG | 0.516625 | 1.4:+86027630 | None:intergenic |
| TGCCCCACCACTTACAGATC+CGG | 0.517039 | 1.4:-86026802 | MS.gene029335:CDS |
| GGCATCACTGGCTTGACCAG+TGG | 0.517182 | 1.4:+86025299 | None:intergenic |
| GCAGAGCACCGATGAGTCAA+TGG | 0.518908 | 1.4:-86025247 | MS.gene029335:CDS |
| CGAAGAAAAGCTTTACAAGC+TGG | 0.519651 | 1.4:-86027501 | MS.gene029335:CDS |
| TCCGGTCACTTTAACTGTTG+AGG | 0.521260 | 1.4:-86026784 | MS.gene029335:CDS |
| GAGCAAGGTCAATGAAACTA+AGG | 0.523675 | 1.4:-86027471 | MS.gene029335:CDS |
| TTGGAATCGTTGAAAGCAGA+AGG | 0.527051 | 1.4:-86026876 | MS.gene029335:CDS |
| TAGGTCTAAAGGATCCCAAC+AGG | 0.527324 | 1.4:-86025329 | MS.gene029335:CDS |
| ACCAGTGGGGAAAGGCCTGT+TGG | 0.527981 | 1.4:+86025314 | None:intergenic |
| AGTCATCTCTCTTGGGCACA+AGG | 0.529363 | 1.4:-86027573 | MS.gene029335:CDS |
| TTCCCAGTGCCTATCAACTT+GGG | 0.533942 | 1.4:+86028212 | None:intergenic |
| CAGCGGCACCATTGACTCAT+CGG | 0.534057 | 1.4:+86025239 | None:intergenic |
| GGCTTTGCAGGTATGACTCT+AGG | 0.534133 | 1.4:-86024644 | MS.gene029335:intron |
| TATATTTGGCAGTGGGTCGA+TGG | 0.534191 | 1.4:-86024476 | MS.gene029335:intron |
| GCATCACTGGCTTGACCAGT+GGG | 0.537469 | 1.4:+86025300 | None:intergenic |
| GGAGGATTACCACCCTTAAG+TGG | 0.539563 | 1.4:+86024047 | None:intergenic |
| GACAGTTTGTGGATATGTCT+CGG | 0.541129 | 1.4:-86028265 | None:intergenic |
| ATGTCTCGGATAAGAATTGA+GGG | 0.545450 | 1.4:-86028251 | MS.gene029335:CDS |
| TGACAACCAACCTTTAGGCT+TGG | 0.549250 | 1.4:+86027141 | None:intergenic |
| AAGGGTCTTGGTATGAAGCT+TGG | 0.552053 | 1.4:-86026924 | MS.gene029335:CDS |
| TGATTGATAATTCAAATCGC+AGG | 0.552733 | 1.4:-86024593 | MS.gene029335:intron |
| CTGGCTTGACCAGTGGGGAA+AGG | 0.553289 | 1.4:+86025306 | None:intergenic |
| TTCATACCAAGACCCTTTGG+CGG | 0.558674 | 1.4:+86026930 | None:intergenic |
| CTTCATCAATGTTTGATCTG+AGG | 0.560280 | 1.4:-86025070 | MS.gene029335:CDS |
| GTTCTCTGAGCATATTTGGG+AGG | 0.564000 | 1.4:+86024029 | None:intergenic |
| TGACCGGATCTGTAAGTGGT+GGG | 0.568365 | 1.4:+86026799 | None:intergenic |
| GGAGCAGTGGCAGATGCAGT+TGG | 0.569546 | 1.4:+86026951 | None:intergenic |
| GCAGATACCCTCTTCGTCAA+GGG | 0.569720 | 1.4:+86027631 | None:intergenic |
| AGCAGGTACAGAGCTTCTAT+CGG | 0.569923 | 1.4:+86028143 | None:intergenic |
| TCTTATTCCCTTGACGAAGA+GGG | 0.573537 | 1.4:-86027638 | MS.gene029335:CDS |
| TTTGCCAACGAATATATACT+AGG | 0.575476 | 1.4:-86025348 | MS.gene029335:CDS |
| AGTTAAGCAATACTGTGAGA+TGG | 0.575944 | 1.4:-86027531 | MS.gene029335:CDS |
| AAGAATAGAGGTGATAAAGG+AGG | 0.578057 | 1.4:-86027301 | MS.gene029335:CDS |
| AATGCTGATGAATCGGCTTG+TGG | 0.578310 | 1.4:+86024442 | None:intergenic |
| CAGTGGCAGATGCAGTTGGA+CGG | 0.580800 | 1.4:+86026955 | None:intergenic |
| TTCTTATTCCCTTGACGAAG+AGG | 0.581992 | 1.4:-86027639 | MS.gene029335:CDS |
| AAGGACAGTCCACTCCAAGA+TGG | 0.582320 | 1.4:+86024617 | None:intergenic |
| AAGACCCTTTGGCGGAGCAG+TGG | 0.583230 | 1.4:+86026938 | None:intergenic |
| TTCCCAAGTTGATAGGCACT+GGG | 0.584126 | 1.4:-86028214 | MS.gene029335:CDS |
| TATGTCTCGGATAAGAATTG+AGG | 0.588463 | 1.4:-86028252 | MS.gene029335:CDS |
| AGCCAAAACTTGGCCAGTCT+AGG | 0.590136 | 1.4:-86026830 | MS.gene029335:CDS |
| CCATCAATCTGACTAACAGA+TGG | 0.595071 | 1.4:+86025005 | None:intergenic |
| TGATACATTTAGTGACCTGA+AGG | 0.595305 | 1.4:-86024389 | MS.gene029335:intron |
| GCTTCTCGGAGAGCTGGAAG+AGG | 0.598962 | 1.4:+86025029 | None:intergenic |
| CAAGCTGGTTCAGCAGAGCA+AGG | 0.602199 | 1.4:-86027486 | MS.gene029335:CDS |
| GACCGGATCTGTAAGTGGTG+GGG | 0.605221 | 1.4:+86026800 | None:intergenic |
| GTTTGATCTGAGGAATGTTG+TGG | 0.605658 | 1.4:-86025060 | MS.gene029335:CDS |
| CCACTTTAAAAGACCAACAC+CGG | 0.605688 | 1.4:+86025275 | None:intergenic |
| AAAGGAATCAACATCAGTTG+TGG | 0.606188 | 1.4:+86027168 | None:intergenic |
| AAAGTGACCGGATCTGTAAG+TGG | 0.607953 | 1.4:+86026795 | None:intergenic |
| GATTTGAATTATCAATCAGA+AGG | 0.611442 | 1.4:+86024598 | None:intergenic |
| GGTCAAGCCAGTGATGCCGC+CGG | 0.612112 | 1.4:-86025294 | MS.gene029335:CDS |
| AAGTGAGATTGATAAGAGCA+AGG | 0.620080 | 1.4:-86027429 | MS.gene029335:intron |
| GTCAGATTGATGGAGAATGG+AGG | 0.623551 | 1.4:-86024995 | MS.gene029335:intron |
| GTGACCGGATCTGTAAGTGG+TGG | 0.625034 | 1.4:+86026798 | None:intergenic |
| AGTCTCGTTTCCAGAAGAAG+AGG | 0.627045 | 1.4:+86025115 | None:intergenic |
| AATGTCACACTAAAACGAGA+TGG | 0.630100 | 1.4:-86026753 | MS.gene029335:CDS |
| ATCGTTGAAAGCAGAAGGTG+AGG | 0.632089 | 1.4:-86026871 | MS.gene029335:CDS |
| GTATTGCTTAACTTGTGCAA+CGG | 0.634970 | 1.4:+86027541 | None:intergenic |
| AAACTAAGGATCTTATGAAG+CGG | 0.636182 | 1.4:-86027457 | MS.gene029335:CDS |
| CTAGGAATTCCATCTTGGAG+TGG | 0.636941 | 1.4:-86024626 | MS.gene029335:CDS |
| GTCTCGTTTCCAGAAGAAGA+GGG | 0.649029 | 1.4:+86025116 | None:intergenic |
| GATATGAGCATATCTAGCAG+TGG | 0.667660 | 1.4:-86027226 | MS.gene029335:CDS |
| GTCACACTAAAACGAGATGG+CGG | 0.686876 | 1.4:-86026750 | MS.gene029335:CDS |
| AACATCATACCACTTAAGGG+TGG | 0.688096 | 1.4:-86024056 | MS.gene029335:CDS |
| CTTTAAAAGACCAACACCGG+CGG | 0.688739 | 1.4:+86025278 | None:intergenic |
| AGGGTGTGTCTTGAAAGAGA+TGG | 0.696577 | 1.4:+86025389 | None:intergenic |
| GATGTTAACTCACTTGTCAG+CGG | 0.717510 | 1.4:+86025222 | None:intergenic |
| CATCACTGGCTTGACCAGTG+GGG | 0.736650 | 1.4:+86025301 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATAAAGATAATAAC+AGG | + | chr1.4:86027717-86027736 | None:intergenic | 10.0% |
| !! | TAAATGAAATATGTTAATAT+GGG | - | chr1.4:86026399-86026418 | MS.gene029335:intron | 10.0% |
| !! | TGACAAAAAAATTAATTTAA+GGG | + | chr1.4:86024524-86024543 | None:intergenic | 10.0% |
| !! | TTGACAAAAAAATTAATTTA+AGG | + | chr1.4:86024525-86024544 | None:intergenic | 10.0% |
| !!! | GTTATTATCTTTATTTTTAT+TGG | - | chr1.4:86027717-86027736 | MS.gene029335:intron | 10.0% |
| !! | GTAAATGAAATATGTTAATA+TGG | - | chr1.4:86026398-86026417 | MS.gene029335:intron | 15.0% |
| !! | TATATTGAAAATTGTATTTC+CGG | + | chr1.4:86026607-86026626 | None:intergenic | 15.0% |
| !! | TTGTCTGATTATAATATATT+TGG | - | chr1.4:86027756-86027775 | MS.gene029335:intron | 15.0% |
| !!! | GTTCATTACTTAATATTTTT+AGG | - | chr1.4:86024574-86024593 | MS.gene029335:intron | 15.0% |
| !!! | TATTGAATTTTATAAGGTTT+AGG | - | chr1.4:86024442-86024461 | MS.gene029335:CDS | 15.0% |
| !!! | TTGGTATATTGAATTTTATA+AGG | - | chr1.4:86024436-86024455 | MS.gene029335:CDS | 15.0% |
| !!! | TTTTTTAGCTAGATTTTTTA+AGG | - | chr1.4:86025923-86025942 | MS.gene029335:intron | 15.0% |
| !! | AATAACTCTTTATTCATGTT+AGG | + | chr1.4:86026880-86026899 | None:intergenic | 20.0% |
| !! | AATTATTCAAAATGAATTCC+TGG | + | chr1.4:86025655-86025674 | None:intergenic | 20.0% |
| !! | ACCAATCAATTGAAAATAAA+TGG | + | chr1.4:86024212-86024231 | None:intergenic | 20.0% |
| !! | ATAACTCTTTATTCATGTTA+GGG | + | chr1.4:86026879-86026898 | None:intergenic | 20.0% |
| !! | ATATTGAAAATTGTATTTCC+GGG | + | chr1.4:86026606-86026625 | None:intergenic | 20.0% |
| !! | ATTATAATATATTTGGCAGT+GGG | - | chr1.4:86027763-86027782 | MS.gene029335:intron | 20.0% |
| !! | ATTCAGAAACATGATAATAT+TGG | + | chr1.4:86025224-86025243 | None:intergenic | 20.0% |
| !! | CTAATTCAAACAAATTTAGT+TGG | + | chr1.4:86027420-86027439 | None:intergenic | 20.0% |
| !! | GATAATGTTTAAAAATCAGT+CGG | - | chr1.4:86025861-86025880 | MS.gene029335:intron | 20.0% |
| !! | TAAATGAAGAAATGAAACTT+AGG | + | chr1.4:86024381-86024400 | None:intergenic | 20.0% |
| !! | TGATGTACAAAAAAAAAAAC+TGG | + | chr1.4:86026689-86026708 | None:intergenic | 20.0% |
| !! | TTTGTTTGAATTAGAATGTT+CGG | - | chr1.4:86027426-86027445 | MS.gene029335:intron | 20.0% |
| !!! | ATTATCATGTTTCTGAATAA+AGG | - | chr1.4:86025226-86025245 | MS.gene029335:intron | 20.0% |
| !!! | ATTGATGAAATTGTTTTTAG+TGG | - | chr1.4:86024465-86024484 | MS.gene029335:CDS | 20.0% |
| !!! | GAATGAATAAGAGAAATTTT+AGG | + | chr1.4:86026712-86026731 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTTTCTTTCTTTC+TGG | - | chr1.4:86027893-86027912 | MS.gene029335:intron | 20.0% |
| !!! | TAATTGATTTATTTGAACCA+AGG | + | chr1.4:86025897-86025916 | None:intergenic | 20.0% |
| !!! | TCCATTTATTTTCAATTGAT+TGG | - | chr1.4:86024208-86024227 | MS.gene029335:intron | 20.0% |
| !!! | TTATCATGTTTCTGAATAAA+GGG | - | chr1.4:86025227-86025246 | MS.gene029335:intron | 20.0% |
| !!! | TTCAGTACATTGAATTTTAT+AGG | - | chr1.4:86024410-86024429 | MS.gene029335:CDS | 20.0% |
| !!! | TTCATTTTTTTCTTCATCAT+GGG | + | chr1.4:86026574-86026593 | None:intergenic | 20.0% |
| !!! | TTGATGAAATTGTTTTTAGT+GGG | - | chr1.4:86024466-86024485 | MS.gene029335:CDS | 20.0% |
| !!! | TTTTAATCACATCATCATTT+GGG | - | chr1.4:86025707-86025726 | MS.gene029335:intron | 20.0% |
| ! | AAGCTATCATTAATTCTGTT+AGG | - | chr1.4:86026192-86026211 | MS.gene029335:intron | 25.0% |
| ! | AGTGATATATGCATACAAAA+AGG | + | chr1.4:86026769-86026788 | None:intergenic | 25.0% |
| ! | ATTCAAACAAATTTAGTTGG+TGG | + | chr1.4:86027417-86027436 | None:intergenic | 25.0% |
| ! | CTCTAATTCTGCAATAAAAT+TGG | - | chr1.4:86027581-86027600 | MS.gene029335:CDS | 25.0% |
| ! | GAATAACAGTATTCAATTAC+TGG | - | chr1.4:86026073-86026092 | MS.gene029335:intron | 25.0% |
| ! | GATTATAATATATTTGGCAG+TGG | - | chr1.4:86027762-86027781 | MS.gene029335:intron | 25.0% |
| ! | GATTTGAATTATCAATCAGA+AGG | + | chr1.4:86027651-86027670 | None:intergenic | 25.0% |
| ! | GTGATATATGCATACAAAAA+GGG | + | chr1.4:86026768-86026787 | None:intergenic | 25.0% |
| ! | TAGTTAGGGAAGTTAATAAA+AGG | + | chr1.4:86026143-86026162 | None:intergenic | 25.0% |
| ! | TGCTTGAATATTGATGTAAT+GGG | - | chr1.4:86028124-86028143 | MS.gene029335:CDS | 25.0% |
| ! | TTCATTTCTTCATTTACATG+TGG | - | chr1.4:86024385-86024404 | MS.gene029335:intron | 25.0% |
| ! | TTCTGGCATTCAAATTTATT+TGG | - | chr1.4:86027910-86027929 | MS.gene029335:intron | 25.0% |
| ! | TTGCTTGAATATTGATGTAA+TGG | - | chr1.4:86028123-86028142 | MS.gene029335:CDS | 25.0% |
| ! | TTTAATCACATCATCATTTG+GGG | - | chr1.4:86025708-86025727 | MS.gene029335:intron | 25.0% |
| ! | TTTCAGAAAGAATACAAGTT+TGG | + | chr1.4:86024188-86024207 | None:intergenic | 25.0% |
| !! | AGTTTGAAACAATGTCAAAA+TGG | - | chr1.4:86027952-86027971 | MS.gene029335:intron | 25.0% |
| !! | CATTGAATTTTATAGGTGTT+TGG | - | chr1.4:86024417-86024436 | MS.gene029335:CDS | 25.0% |
| !! | CTTTTAATCACATCATCATT+TGG | - | chr1.4:86025706-86025725 | MS.gene029335:intron | 25.0% |
| !! | GCATTAAAACTGATTCAAAA+TGG | + | chr1.4:86024502-86024521 | None:intergenic | 25.0% |
| !! | TAATACCTTACAGGTATTTT+AGG | + | chr1.4:86026443-86026462 | None:intergenic | 25.0% |
| !! | TCAAAAGACAAATCAGTTTT+TGG | - | chr1.4:86025351-86025370 | MS.gene029335:CDS | 25.0% |
| !! | TTGATATGTGGTGTATTTTA+GGG | - | chr1.4:86026505-86026524 | MS.gene029335:intron | 25.0% |
| !! | TTTGATATGTGGTGTATTTT+AGG | - | chr1.4:86026504-86026523 | MS.gene029335:intron | 25.0% |
| !! | TTTTTGTATGCATATATCAC+TGG | - | chr1.4:86026768-86026787 | MS.gene029335:CDS | 25.0% |
| !!! | AAGTCATCAATTGATGATTT+TGG | + | chr1.4:86027500-86027519 | None:intergenic | 25.0% |
| !!! | AATCATTTTGGTTACCTATT+TGG | - | chr1.4:86026536-86026555 | MS.gene029335:intron | 25.0% |
| !!! | AGTCATCAATTGATGATTTT+GGG | + | chr1.4:86027499-86027518 | None:intergenic | 25.0% |
| !!! | ATCATTTTGGTTACCTATTT+GGG | - | chr1.4:86026537-86026556 | MS.gene029335:intron | 25.0% |
| !!! | ATTATGTTGCTTTTGATATG+TGG | - | chr1.4:86026493-86026512 | MS.gene029335:intron | 25.0% |
| !!! | CTTCATTTTTTTCTTCATCA+TGG | + | chr1.4:86026575-86026594 | None:intergenic | 25.0% |
| !!! | GTTAGTAATTTTGATGTTCA+AGG | - | chr1.4:86025520-86025539 | MS.gene029335:intron | 25.0% |
| AAACTAAGGATCTTATGAAG+CGG | - | chr1.4:86024789-86024808 | MS.gene029335:intron | 30.0% | |
| AAATTCCCATGATTTACATG+AGG | - | chr1.4:86025789-86025808 | MS.gene029335:intron | 30.0% | |
| AATTAGAGAGCAAGAATGTA+AGG | + | chr1.4:86027569-86027588 | None:intergenic | 30.0% | |
| ACAAACATCATACCACTTAA+GGG | - | chr1.4:86028187-86028206 | MS.gene029335:CDS | 30.0% | |
| ACTAAACCTCATGTAAATCA+TGG | + | chr1.4:86025798-86025817 | None:intergenic | 30.0% | |
| ATGAACTGAATATAAGAGCA+AGG | + | chr1.4:86024560-86024579 | None:intergenic | 30.0% | |
| ATTTATGACAACCAACCTTT+AGG | + | chr1.4:86025113-86025132 | None:intergenic | 30.0% | |
| CAAATTCTTAACCAAGAAGA+TGG | - | chr1.4:86025556-86025575 | MS.gene029335:intron | 30.0% | |
| CAAGGGAATAAGAATATTCA+GGG | + | chr1.4:86024601-86024620 | None:intergenic | 30.0% | |
| CATCTTCTTGGTTAAGAATT+TGG | + | chr1.4:86025558-86025577 | None:intergenic | 30.0% | |
| CGAATATATACTAGGTCTAA+AGG | - | chr1.4:86026906-86026925 | MS.gene029335:CDS | 30.0% | |
| CTAAACCTCATGTAAATCAT+GGG | + | chr1.4:86025797-86025816 | None:intergenic | 30.0% | |
| CTACTGTACAACCATTTAAT+AGG | - | chr1.4:86026252-86026271 | MS.gene029335:intron | 30.0% | |
| CTATTAAATGGTTGTACAGT+AGG | + | chr1.4:86026254-86026273 | None:intergenic | 30.0% | |
| CTTTCTCTGAACAATTGTTA+GGG | - | chr1.4:86027293-86027312 | MS.gene029335:CDS | 30.0% | |
| GAAAAGAATAGAGGTGATAA+AGG | - | chr1.4:86024942-86024961 | MS.gene029335:intron | 30.0% | |
| GAAATATGTTAATATGGGTG+TGG | - | chr1.4:86026404-86026423 | MS.gene029335:intron | 30.0% | |
| GTTCAGATTGAAAAGAATAG+AGG | - | chr1.4:86024933-86024952 | MS.gene029335:intron | 30.0% | |
| TAAGAATTTGGAGAGACAAT+TGG | + | chr1.4:86025546-86025565 | None:intergenic | 30.0% | |
| TACAAACATCATACCACTTA+AGG | - | chr1.4:86028186-86028205 | MS.gene029335:CDS | 30.0% | |
| TAGACCTAGTATATATTCGT+TGG | + | chr1.4:86026905-86026924 | None:intergenic | 30.0% | |
| TAGGGAAGTTAATAAAAGGA+GGG | + | chr1.4:86026139-86026158 | None:intergenic | 30.0% | |
| TCAAGGGAATAAGAATATTC+AGG | + | chr1.4:86024602-86024621 | None:intergenic | 30.0% | |
| TTAAATGTAACGACTGTGAA+TGG | - | chr1.4:86025158-86025177 | MS.gene029335:intron | 30.0% | |
| TTAGGGAAGTTAATAAAAGG+AGG | + | chr1.4:86026140-86026159 | None:intergenic | 30.0% | |
| TTCATTTACTTCTCTCTTTC+AGG | + | chr1.4:86026387-86026406 | None:intergenic | 30.0% | |
| TTCTCAATTTCCTGTCATAT+TGG | - | chr1.4:86024318-86024337 | MS.gene029335:intron | 30.0% | |
| TTTCTCTGAACAATTGTTAG+GGG | - | chr1.4:86027294-86027313 | MS.gene029335:CDS | 30.0% | |
| TTTGCCAACGAATATATACT+AGG | - | chr1.4:86026898-86026917 | MS.gene029335:CDS | 30.0% | |
| ! | AACCATGGTTTTTGTGTTTT+GGG | - | chr1.4:86027319-86027338 | MS.gene029335:intron | 30.0% |
| ! | GTGAAACAAATTCTTTTTCC+TGG | - | chr1.4:86025742-86025761 | MS.gene029335:intron | 30.0% |
| ! | TGATTGATAATTCAAATCGC+AGG | - | chr1.4:86027653-86027672 | MS.gene029335:CDS | 30.0% |
| ! | TTATGTCAGCATTGAATATG+AGG | - | chr1.4:86027153-86027172 | MS.gene029335:CDS | 30.0% |
| ! | TTTAGTTTCCAGTGATATGT+TGG | - | chr1.4:86025812-86025831 | MS.gene029335:intron | 30.0% |
| !! | ACTTAAGATGAGCTGTTTTA+TGG | - | chr1.4:86025958-86025977 | MS.gene029335:intron | 30.0% |
| !! | AGCTTTTCACTTCTGAAAAT+AGG | + | chr1.4:86026031-86026050 | None:intergenic | 30.0% |
| !! | ATCAATTGATGATTTTGGGA+GGG | + | chr1.4:86027495-86027514 | None:intergenic | 30.0% |
| !! | CTTAAGATGAGCTGTTTTAT+GGG | - | chr1.4:86025959-86025978 | MS.gene029335:intron | 30.0% |
| !!! | ATGAAATTGTTTTTAGTGGG+AGG | - | chr1.4:86024469-86024488 | MS.gene029335:intron | 30.0% |
| !!! | TCATTTTGGTTACCTATTTG+GGG | - | chr1.4:86026538-86026557 | MS.gene029335:intron | 30.0% |
| AAAAATGAAGAGTTTGTGCC+CGG | - | chr1.4:86026585-86026604 | MS.gene029335:intron | 35.0% | |
| AAACAAACAGAGCAACATAC+TGG | - | chr1.4:86024135-86024154 | MS.gene029335:intron | 35.0% | |
| AAACGCAAAAATCAGCTCAA+AGG | + | chr1.4:86024648-86024667 | None:intergenic | 35.0% | |
| AAAGGAATCAACATCAGTTG+TGG | + | chr1.4:86025081-86025100 | None:intergenic | 35.0% | |
| AAATCGCAGGTATGCTAAAT+TGG | - | chr1.4:86027666-86027685 | MS.gene029335:intron | 35.0% | |
| AACCCAAAACACAAAAACCA+TGG | + | chr1.4:86027324-86027343 | None:intergenic | 35.0% | |
| AAGAATAGAGGTGATAAAGG+AGG | - | chr1.4:86024945-86024964 | MS.gene029335:intron | 35.0% | |
| AAGTGAGATTGATAAGAGCA+AGG | - | chr1.4:86024817-86024836 | MS.gene029335:intron | 35.0% | |
| AATGTCACACTAAAACGAGA+TGG | - | chr1.4:86025493-86025512 | MS.gene029335:intron | 35.0% | |
| ACTCTACTATTCTCTTCCTT+AGG | - | chr1.4:86025268-86025287 | MS.gene029335:CDS | 35.0% | |
| AGTTAAGCAATACTGTGAGA+TGG | - | chr1.4:86024715-86024734 | MS.gene029335:intron | 35.0% | |
| ATGTCTCGGATAAGAATTGA+GGG | - | chr1.4:86023995-86024014 | MS.gene029335:CDS | 35.0% | |
| CAACCATTTAATAGGTGGTA+TGG | - | chr1.4:86026260-86026279 | MS.gene029335:intron | 35.0% | |
| CAATAGATAACATCTAAGCC+AGG | + | chr1.4:86025763-86025782 | None:intergenic | 35.0% | |
| CCTAACAATTGTTCAGAGAA+AGG | + | chr1.4:86027295-86027314 | None:intergenic | 35.0% | |
| CCTTTCTCTGAACAATTGTT+AGG | - | chr1.4:86027292-86027311 | MS.gene029335:CDS | 35.0% | |
| CTACCATACCACCTATTAAA+TGG | + | chr1.4:86026266-86026285 | None:intergenic | 35.0% | |
| CTGGAAGACAACTAAAGTAT+CGG | - | chr1.4:86026787-86026806 | MS.gene029335:CDS | 35.0% | |
| CTGTACAACCATTTAATAGG+TGG | - | chr1.4:86026255-86026274 | MS.gene029335:intron | 35.0% | |
| CTTCATCAATGTTTGATCTG+AGG | - | chr1.4:86027176-86027195 | MS.gene029335:CDS | 35.0% | |
| CTTGAATATGTCCATCTTCT+TGG | + | chr1.4:86025570-86025589 | None:intergenic | 35.0% | |
| GAAGATGTTTGTATGACTGA+AGG | - | chr1.4:86028012-86028031 | MS.gene029335:intron | 35.0% | |
| GATAATATTGGCACAGAACA+AGG | + | chr1.4:86025212-86025231 | None:intergenic | 35.0% | |
| GTTCTCTCTGTCCAAAATAT+AGG | + | chr1.4:86026321-86026340 | None:intergenic | 35.0% | |
| TCAGTCATACAAACATCTTC+AGG | + | chr1.4:86028012-86028031 | None:intergenic | 35.0% | |
| TGATAAGAGCAAGGTATGAT+TGG | - | chr1.4:86024826-86024845 | MS.gene029335:intron | 35.0% | |
| TGATACATTTAGTGACCTGA+AGG | - | chr1.4:86027857-86027876 | MS.gene029335:intron | 35.0% | |
| TGTGTTCTCTGAGCATATTT+GGG | + | chr1.4:86028223-86028242 | None:intergenic | 35.0% | |
| TTAATAAAAGGAGGGAACAG+TGG | + | chr1.4:86026131-86026150 | None:intergenic | 35.0% | |
| TTAGGCCTAAAATACCTGTA+AGG | - | chr1.4:86026435-86026454 | MS.gene029335:intron | 35.0% | |
| TTAGTCAGATTGATGGAGAA+TGG | - | chr1.4:86027248-86027267 | MS.gene029335:CDS | 35.0% | |
| TTATCCATAACTGCAGTTGA+CGG | + | chr1.4:86028089-86028108 | None:intergenic | 35.0% | |
| TTGATGAAGTCATCTCTCTT+GGG | - | chr1.4:86024666-86024685 | MS.gene029335:intron | 35.0% | |
| TTGTTTGTCCAACATATCAC+TGG | + | chr1.4:86025823-86025842 | None:intergenic | 35.0% | |
| TTTCTAATGCAGTCAACTGT+TGG | - | chr1.4:86027107-86027126 | MS.gene029335:intron | 35.0% | |
| TTTGATGAAGTCATCTCTCT+TGG | - | chr1.4:86024665-86024684 | MS.gene029335:intron | 35.0% | |
| ! | AGATGGACATATTCAAGTTC+AGG | - | chr1.4:86025573-86025592 | MS.gene029335:intron | 35.0% |
| ! | AGGGACTGAAACAATCATTT+TGG | - | chr1.4:86026524-86026543 | MS.gene029335:intron | 35.0% |
| ! | ATAGTTAGGCTAGGTTAGTT+AGG | + | chr1.4:86026158-86026177 | None:intergenic | 35.0% |
| ! | CAACCATGGTTTTTGTGTTT+TGG | - | chr1.4:86027318-86027337 | MS.gene029335:intron | 35.0% |
| ! | GAGAAATGGTAACGATTGTA+GGG | + | chr1.4:86026232-86026251 | None:intergenic | 35.0% |
| ! | GTTAACTTAGTATGACTTGC+TGG | - | chr1.4:86024267-86024286 | MS.gene029335:intron | 35.0% |
| ! | GTTTGTTTGTTACAAGAAGC+AGG | + | chr1.4:86024123-86024142 | None:intergenic | 35.0% |
| ! | TAGTTAGGCTAGGTTAGTTA+GGG | + | chr1.4:86026157-86026176 | None:intergenic | 35.0% |
| ! | TCCCATTTCAGTTCGTTTTA+CGG | - | chr1.4:86027830-86027849 | MS.gene029335:intron | 35.0% |
| ! | TGTCATATTGGTGCTTTCAT+GGG | - | chr1.4:86024330-86024349 | MS.gene029335:intron | 35.0% |
| ! | TTGTGCGTTCTCCTATATTT+TGG | - | chr1.4:86026307-86026326 | MS.gene029335:intron | 35.0% |
| !! | AATGATAGCTTTAACTGCCT+TGG | + | chr1.4:86026183-86026202 | None:intergenic | 35.0% |
| !! | CATCAATTGATGATTTTGGG+AGG | + | chr1.4:86027496-86027515 | None:intergenic | 35.0% |
| !! | GTATTGCTTAACTTGTGCAA+CGG | + | chr1.4:86024708-86024727 | None:intergenic | 35.0% |
| !! | TCAATTGATGATTTTGGGAG+GGG | + | chr1.4:86027494-86027513 | None:intergenic | 35.0% |
| !! | TGCAATAAAATTGGCTTTGC+AGG | - | chr1.4:86027590-86027609 | MS.gene029335:CDS | 35.0% |
| !!! | ATTGGTCTTTTCGTCTTGTT+AGG | - | chr1.4:86024226-86024245 | MS.gene029335:intron | 35.0% |
| !!! | TCTTTTTTGCTTCTCTTTGC+AGG | - | chr1.4:86028162-86028181 | MS.gene029335:CDS | 35.0% |
| !!! | TTATCATGCCTTGTTTTTGC+AGG | - | chr1.4:86026813-86026832 | MS.gene029335:CDS | 35.0% |
| AAAAAGGGTCTTGAGAAGAG+GGG | + | chr1.4:86026753-86026772 | None:intergenic | 40.0% | |
| AACATCATACCACTTAAGGG+TGG | - | chr1.4:86028190-86028209 | MS.gene029335:CDS | 40.0% | |
| AAGAGCAAGGTATGATTGGA+GGG | - | chr1.4:86024830-86024849 | MS.gene029335:intron | 40.0% | |
| AATCTTCTCACAGACATGGT+GGG | - | chr1.4:86025998-86026017 | MS.gene029335:intron | 40.0% | |
| ACAAAAAGGGTCTTGAGAAG+AGG | + | chr1.4:86026755-86026774 | None:intergenic | 40.0% | |
| AGTCCAAGAAGAATAAGGCT+TGG | + | chr1.4:86026355-86026374 | None:intergenic | 40.0% | |
| AGTTTGGACCTGCAAAAACA+AGG | + | chr1.4:86026824-86026843 | None:intergenic | 40.0% | |
| CAAAAAGGGTCTTGAGAAGA+GGG | + | chr1.4:86026754-86026773 | None:intergenic | 40.0% | |
| CACCTAGTCCAAGAAGAATA+AGG | + | chr1.4:86026360-86026379 | None:intergenic | 40.0% | |
| CCAGAAGGAGGAAAAGTTAT+TGG | + | chr1.4:86026104-86026123 | None:intergenic | 40.0% | |
| CCATCAATCTGACTAACAGA+TGG | + | chr1.4:86027244-86027263 | None:intergenic | 40.0% | |
| CCATCTGTTAGTCAGATTGA+TGG | - | chr1.4:86027241-86027260 | MS.gene029335:CDS | 40.0% | |
| CGAAGAAAAGCTTTACAAGC+TGG | - | chr1.4:86024745-86024764 | MS.gene029335:intron | 40.0% | |
| CGCACAACTATATGACCAAA+CGG | + | chr1.4:86026294-86026313 | None:intergenic | 40.0% | |
| CTGTGTTCTCTGAGCATATT+TGG | + | chr1.4:86028224-86028243 | None:intergenic | 40.0% | |
| GAAGTTGTTCAGCCAAAACT+TGG | - | chr1.4:86025406-86025425 | MS.gene029335:CDS | 40.0% | |
| GACAGGAAATTGAGAAGACA+TGG | + | chr1.4:86024314-86024333 | None:intergenic | 40.0% | |
| GAGCAACATACTGGAAGATT+TGG | - | chr1.4:86024144-86024163 | MS.gene029335:intron | 40.0% | |
| GAGCAAGGTCAATGAAACTA+AGG | - | chr1.4:86024775-86024794 | MS.gene029335:intron | 40.0% | |
| GATATGAGCATATCTAGCAG+TGG | - | chr1.4:86025020-86025039 | MS.gene029335:CDS | 40.0% | |
| GATGTTAACTCACTTGTCAG+CGG | + | chr1.4:86027027-86027046 | None:intergenic | 40.0% | |
| GCAGGTATGCTAAATTGGAA+TGG | - | chr1.4:86027671-86027690 | MS.gene029335:intron | 40.0% | |
| GCCGTAAAACGAACTGAAAT+GGG | + | chr1.4:86027834-86027853 | None:intergenic | 40.0% | |
| GGCACAAAAATTCTAGACTC+AGG | + | chr1.4:86024293-86024312 | None:intergenic | 40.0% | |
| GGGAAAGAATGCTGATGAAT+CGG | + | chr1.4:86027814-86027833 | None:intergenic | 40.0% | |
| GTCTGGTATAAATGAGCTGA+TGG | - | chr1.4:86027347-86027366 | MS.gene029335:intron | 40.0% | |
| GTTAACATCGATCATTGACG+TGG | - | chr1.4:86027038-86027057 | MS.gene029335:intron | 40.0% | |
| GTTCAATCTTCTCACAGACA+TGG | - | chr1.4:86025994-86026013 | MS.gene029335:intron | 40.0% | |
| GTTTGATCTGAGGAATGTTG+TGG | - | chr1.4:86027186-86027205 | MS.gene029335:CDS | 40.0% | |
| TAACTGCCTTGGCTATAGTT+AGG | + | chr1.4:86026172-86026191 | None:intergenic | 40.0% | |
| TAAGAGCAAGGTATGATTGG+AGG | - | chr1.4:86024829-86024848 | MS.gene029335:intron | 40.0% | |
| TCCTCAACAGTTAAAGTGAC+CGG | + | chr1.4:86025466-86025485 | None:intergenic | 40.0% | |
| TCTGAGGAATGTTGTGGTTT+CGG | - | chr1.4:86027192-86027211 | MS.gene029335:CDS | 40.0% | |
| TCTTATTCCCTTGACGAAGA+GGG | - | chr1.4:86024608-86024627 | MS.gene029335:CDS | 40.0% | |
| TGCCGTAAAACGAACTGAAA+TGG | + | chr1.4:86027835-86027854 | None:intergenic | 40.0% | |
| TGGCTTGATTATCACCAGTT+TGG | + | chr1.4:86026840-86026859 | None:intergenic | 40.0% | |
| TGGTTGTACAGTAGGAGAAA+TGG | + | chr1.4:86026246-86026265 | None:intergenic | 40.0% | |
| TGTCTGTGAGAAGATTGAAC+AGG | + | chr1.4:86025994-86026013 | None:intergenic | 40.0% | |
| TTCTTATTCCCTTGACGAAG+AGG | - | chr1.4:86024607-86024626 | MS.gene029335:CDS | 40.0% | |
| TTGGAATCGTTGAAAGCAGA+AGG | - | chr1.4:86025370-86025389 | MS.gene029335:CDS | 40.0% | |
| TTTCTACCAAGCCTAAAGGT+TGG | - | chr1.4:86025099-86025118 | MS.gene029335:CDS | 40.0% | |
| TTTGGTCCGTTAACGTCAAT+GGG | - | chr1.4:86024969-86024988 | MS.gene029335:intron | 40.0% | |
| ! | ACCTTTAGGCTTGGTAGAAA+AGG | + | chr1.4:86025099-86025118 | None:intergenic | 40.0% |
| ! | CCAATAACTTTTCCTCCTTC+TGG | - | chr1.4:86026101-86026120 | MS.gene029335:intron | 40.0% |
| ! | CCACTTTAAAAGACCAACAC+CGG | + | chr1.4:86026974-86026993 | None:intergenic | 40.0% |
| ! | CCTGTAAGGTATTACACTGA+CGG | - | chr1.4:86026449-86026468 | MS.gene029335:intron | 40.0% |
| ! | CTGTCATATTGGTGCTTTCA+TGG | - | chr1.4:86024329-86024348 | MS.gene029335:intron | 40.0% |
| ! | GGAGAAATGGTAACGATTGT+AGG | + | chr1.4:86026233-86026252 | None:intergenic | 40.0% |
| ! | GTCATATTGGTGCTTTCATG+GGG | - | chr1.4:86024331-86024350 | MS.gene029335:intron | 40.0% |
| ! | TATTCTTCTTGGACTAGGTG+AGG | - | chr1.4:86026360-86026379 | MS.gene029335:intron | 40.0% |
| ! | TCCTTTTCTACCAAGCCTAA+AGG | - | chr1.4:86025095-86025114 | MS.gene029335:CDS | 40.0% |
| ! | TGACTCTAGGAATTCCATCT+TGG | - | chr1.4:86027615-86027634 | MS.gene029335:CDS | 40.0% |
| !! | AGCCTTATTCTTCTTGGACT+AGG | - | chr1.4:86026355-86026374 | MS.gene029335:intron | 40.0% |
| !! | ATTCTGTTAGGTACTGATCG+TGG | - | chr1.4:86026204-86026223 | MS.gene029335:intron | 40.0% |
| !! | CAACCAAGCCTTATTCTTCT+TGG | - | chr1.4:86026349-86026368 | MS.gene029335:intron | 40.0% |
| !! | CATGAAAGCACCAATATGAC+AGG | + | chr1.4:86024331-86024350 | None:intergenic | 40.0% |
| !! | CGTCTTGTTAGGAGCATTAT+TGG | - | chr1.4:86024237-86024256 | MS.gene029335:intron | 40.0% |
| !!! | TTGTGTTTTGGGTTGAAGTC+TGG | - | chr1.4:86027330-86027349 | MS.gene029335:intron | 40.0% |
| !!! | TTGTTTTTGCAGGTCCAAAC+TGG | - | chr1.4:86026823-86026842 | MS.gene029335:CDS | 40.0% |
| AAAGTGACCGGATCTGTAAG+TGG | + | chr1.4:86025454-86025473 | None:intergenic | 45.0% | |
| AAGGGTCTTGGTATGAAGCT+TGG | - | chr1.4:86025322-86025341 | MS.gene029335:CDS | 45.0% | |
| ACCAATCCATACGAACCTTC+AGG | + | chr1.4:86027875-86027894 | None:intergenic | 45.0% | |
| ACCTAGCCTAACTATAGCCA+AGG | - | chr1.4:86026163-86026182 | MS.gene029335:intron | 45.0% | |
| ACCTGAAGGTTCGTATGGAT+TGG | - | chr1.4:86027871-86027890 | MS.gene029335:intron | 45.0% | |
| AGAGGTGATAAAGGAGGCTT+TGG | - | chr1.4:86024951-86024970 | MS.gene029335:intron | 45.0% | |
| AGCAGGTACAGAGCTTCTAT+CGG | + | chr1.4:86024106-86024125 | None:intergenic | 45.0% | |
| AGCATATCTAGCAGTGGAAC+TGG | - | chr1.4:86025026-86025045 | MS.gene029335:CDS | 45.0% | |
| AGCTTCATACCAAGACCCTT+TGG | + | chr1.4:86025322-86025341 | None:intergenic | 45.0% | |
| AGGGTGTGTCTTGAAAGAGA+TGG | + | chr1.4:86026860-86026879 | None:intergenic | 45.0% | |
| AGTCTCGTTTCCAGAAGAAG+AGG | + | chr1.4:86027134-86027153 | None:intergenic | 45.0% | |
| ATCGTTGAAAGCAGAAGGTG+AGG | - | chr1.4:86025375-86025394 | MS.gene029335:CDS | 45.0% | |
| ATGGGTGTGGCTGTTCAATT+AGG | - | chr1.4:86026417-86026436 | MS.gene029335:intron | 45.0% | |
| CAATCTTCTCACAGACATGG+TGG | - | chr1.4:86025997-86026016 | MS.gene029335:intron | 45.0% | |
| CAATTGTTAGGGGACAACCA+TGG | - | chr1.4:86027304-86027323 | MS.gene029335:CDS | 45.0% | |
| CCAGATCCCATTGACGTTAA+CGG | + | chr1.4:86024978-86024997 | None:intergenic | 45.0% | |
| CCGTCAGTGTAATACCTTAC+AGG | + | chr1.4:86026452-86026471 | None:intergenic | 45.0% | |
| CTAGGAATTCCATCTTGGAG+TGG | - | chr1.4:86027620-86027639 | MS.gene029335:CDS | 45.0% | |
| CTGTGAGAAGATTGAACAGG+TGG | + | chr1.4:86025991-86026010 | None:intergenic | 45.0% | |
| CTTGAGAAGAGGGGAAGAAT+CGG | + | chr1.4:86026744-86026763 | None:intergenic | 45.0% | |
| CTTTGGTCCGTTAACGTCAA+TGG | - | chr1.4:86024968-86024987 | MS.gene029335:intron | 45.0% | |
| GACTAACAGATGGTGCTTCT+CGG | + | chr1.4:86027234-86027253 | None:intergenic | 45.0% | |
| GGCGAAAACTATCCCCAAAT+AGG | + | chr1.4:86026553-86026572 | None:intergenic | 45.0% | |
| GTCACACTAAAACGAGATGG+CGG | - | chr1.4:86025496-86025515 | MS.gene029335:intron | 45.0% | |
| GTCAGATTGATGGAGAATGG+AGG | - | chr1.4:86027251-86027270 | MS.gene029335:CDS | 45.0% | |
| GTCTCGTTTCCAGAAGAAGA+GGG | + | chr1.4:86027133-86027152 | None:intergenic | 45.0% | |
| GTTCTCTGAGCATATTTGGG+AGG | + | chr1.4:86028220-86028239 | None:intergenic | 45.0% | |
| TAGGTCTAAAGGATCCCAAC+AGG | - | chr1.4:86026917-86026936 | MS.gene029335:CDS | 45.0% | |
| TAGTGACCTGAAGGTTCGTA+TGG | - | chr1.4:86027866-86027885 | MS.gene029335:intron | 45.0% | |
| TATATTTGGCAGTGGGTCGA+TGG | - | chr1.4:86027770-86027789 | MS.gene029335:intron | 45.0% | |
| TGACAACCAACCTTTAGGCT+TGG | + | chr1.4:86025108-86025127 | None:intergenic | 45.0% | |
| TTCATACCAAGACCCTTTGG+CGG | + | chr1.4:86025319-86025338 | None:intergenic | 45.0% | |
| TTCCCAGTGCCTATCAACTT+GGG | + | chr1.4:86024037-86024056 | None:intergenic | 45.0% | |
| TTTCCCAGTGCCTATCAACT+TGG | + | chr1.4:86024038-86024057 | None:intergenic | 45.0% | |
| ! | CTTTAAAAGACCAACACCGG+CGG | + | chr1.4:86026971-86026990 | None:intergenic | 45.0% |
| ! | TCCGGTCACTTTAACTGTTG+AGG | - | chr1.4:86025462-86025481 | MS.gene029335:intron | 45.0% |
| ! | TGCAGTTGACGGATGGTATA+AGG | + | chr1.4:86028078-86028097 | None:intergenic | 45.0% |
| !! | AATGCTGATGAATCGGCTTG+TGG | + | chr1.4:86027807-86027826 | None:intergenic | 45.0% |
| !! | ATTGATGATTTTGGGAGGGG+AGG | + | chr1.4:86027491-86027510 | None:intergenic | 45.0% |
| !! | GCAGCATTTCCCAAGTTGAT+AGG | - | chr1.4:86024025-86024044 | MS.gene029335:CDS | 45.0% |
| !! | GTGCTTTCATGGGGTTTTGA+CGG | - | chr1.4:86024340-86024359 | MS.gene029335:intron | 45.0% |
| !! | TCTAGCAGTGGAACTGGTTT+TGG | - | chr1.4:86025032-86025051 | MS.gene029335:CDS | 45.0% |
| !! | TTCCCAAGTTGATAGGCACT+GGG | - | chr1.4:86024032-86024051 | MS.gene029335:CDS | 45.0% |
| !! | TTGATGATTTTGGGAGGGGA+GGG | + | chr1.4:86027490-86027509 | None:intergenic | 45.0% |
| !! | TTTCCCAAGTTGATAGGCAC+TGG | - | chr1.4:86024031-86024050 | MS.gene029335:CDS | 45.0% |
| !!! | AGTGGAACTGGTTTTGGAAG+TGG | - | chr1.4:86025038-86025057 | MS.gene029335:CDS | 45.0% |
| !!! | CCGGTGTTGGTCTTTTAAAG+TGG | - | chr1.4:86026971-86026990 | MS.gene029335:intron | 45.0% |
| !!! | TTTGGAAGTGGCTCTGGTTT+TGG | - | chr1.4:86025050-86025069 | MS.gene029335:CDS | 45.0% |
| AACTGTTGGCCCTCTTCTTC+TGG | - | chr1.4:86027121-86027140 | MS.gene029335:intron | 50.0% | |
| AAGGACAGTCCACTCCAAGA+TGG | + | chr1.4:86027632-86027651 | None:intergenic | 50.0% | |
| AGCCAAAACTTGGCCAGTCT+AGG | - | chr1.4:86025416-86025435 | MS.gene029335:intron | 50.0% | |
| AGTCACAGCACACAGAGCTT+GGG | + | chr1.4:86025618-86025637 | None:intergenic | 50.0% | |
| AGTCATCTCTCTTGGGCACA+AGG | - | chr1.4:86024673-86024692 | MS.gene029335:intron | 50.0% | |
| CAGTCGGTATGCAAGTTCCT+TGG | - | chr1.4:86025877-86025896 | MS.gene029335:intron | 50.0% | |
| CCATAACTGCAGTTGACGGA+TGG | + | chr1.4:86028085-86028104 | None:intergenic | 50.0% | |
| CCATCCGTCAACTGCAGTTA+TGG | - | chr1.4:86028082-86028101 | MS.gene029335:CDS | 50.0% | |
| CCGTTAACGTCAATGGGATC+TGG | - | chr1.4:86024975-86024994 | MS.gene029335:intron | 50.0% | |
| GCACAGAACAAGGCACAGTT+TGG | + | chr1.4:86025202-86025221 | None:intergenic | 50.0% | |
| GCAGATACCCTCTTCGTCAA+GGG | + | chr1.4:86024618-86024637 | None:intergenic | 50.0% | |
| GCCTTGGCTATAGTTAGGCT+AGG | + | chr1.4:86026167-86026186 | None:intergenic | 50.0% | |
| GGAGGATTACCACCCTTAAG+TGG | + | chr1.4:86028202-86028221 | None:intergenic | 50.0% | |
| GGCTTTGCAGGTATGACTCT+AGG | - | chr1.4:86027602-86027621 | MS.gene029335:CDS | 50.0% | |
| GGTATGGTAGCACAACCGTT+TGG | - | chr1.4:86026276-86026295 | MS.gene029335:intron | 50.0% | |
| TGACCGGATCTGTAAGTGGT+GGG | + | chr1.4:86025450-86025469 | None:intergenic | 50.0% | |
| TGCAGATACCCTCTTCGTCA+AGG | + | chr1.4:86024619-86024638 | None:intergenic | 50.0% | |
| ! | TCTCACAGACATGGTGGGAT+TGG | - | chr1.4:86026003-86026022 | MS.gene029335:intron | 50.0% |
| !! | AACAGTGGATTGCCAGAAGG+AGG | + | chr1.4:86026116-86026135 | None:intergenic | 50.0% |
| !! | GACTGCTGGTTTGCATAACC+AGG | - | chr1.4:86025634-86025653 | MS.gene029335:intron | 50.0% |
| !! | GTCCTAGACTGGCCAAGTTT+TGG | + | chr1.4:86025421-86025440 | None:intergenic | 50.0% |
| !! | TGATGATTTTGGGAGGGGAG+GGG | + | chr1.4:86027489-86027508 | None:intergenic | 50.0% |
| !!! | ACTGGTTTTGGAAGTGGCTC+TGG | - | chr1.4:86025044-86025063 | MS.gene029335:CDS | 50.0% |
| AGATGCAGTTGGACGGCCTA+AGG | + | chr1.4:86025287-86025306 | None:intergenic | 55.0% | |
| CAGTCACAGCACACAGAGCT+TGG | + | chr1.4:86025619-86025638 | None:intergenic | 55.0% | |
| CAGTGGCAGATGCAGTTGGA+CGG | + | chr1.4:86025294-86025313 | None:intergenic | 55.0% | |
| GACCGGATCTGTAAGTGGTG+GGG | + | chr1.4:86025449-86025468 | None:intergenic | 55.0% | |
| GTGACCGGATCTGTAAGTGG+TGG | + | chr1.4:86025451-86025470 | None:intergenic | 55.0% | |
| TGCCCCACCACTTACAGATC+CGG | - | chr1.4:86025444-86025463 | MS.gene029335:intron | 55.0% | |
| ! | CAAGCTGGTTCAGCAGAGCA+AGG | - | chr1.4:86024760-86024779 | MS.gene029335:intron | 55.0% |
| !! | CAGCGGCACCATTGACTCAT+CGG | + | chr1.4:86027010-86027029 | None:intergenic | 55.0% |
| !! | CATCACTGGCTTGACCAGTG+GGG | + | chr1.4:86026948-86026967 | None:intergenic | 55.0% |
| !! | GCAGAGCACCGATGAGTCAA+TGG | - | chr1.4:86026999-86027018 | MS.gene029335:intron | 55.0% |
| !! | GCATCACTGGCTTGACCAGT+GGG | + | chr1.4:86026949-86026968 | None:intergenic | 55.0% |
| !! | GGGAACAGTGGATTGCCAGA+AGG | + | chr1.4:86026119-86026138 | None:intergenic | 55.0% |
| AAGACCCTTTGGCGGAGCAG+TGG | + | chr1.4:86025311-86025330 | None:intergenic | 60.0% | |
| ACCAGTGGGGAAAGGCCTGT+TGG | + | chr1.4:86026935-86026954 | None:intergenic | 60.0% | |
| ACTGCTCCGCCAAAGGGTCT+TGG | - | chr1.4:86025310-86025329 | MS.gene029335:CDS | 60.0% | |
| ATCTGCCACTGCTCCGCCAA+AGG | - | chr1.4:86025303-86025322 | MS.gene029335:CDS | 60.0% | |
| CCAGTGGGGAAAGGCCTGTT+GGG | + | chr1.4:86026934-86026953 | None:intergenic | 60.0% | |
| GATGGTGCTTCTCGGAGAGC+TGG | + | chr1.4:86027226-86027245 | None:intergenic | 60.0% | |
| GCTCTGTGTGCTGTGACTGC+TGG | - | chr1.4:86025620-86025639 | MS.gene029335:intron | 60.0% | |
| GCTTCTCGGAGAGCTGGAAG+AGG | + | chr1.4:86027220-86027239 | None:intergenic | 60.0% | |
| GGAGCAGTGGCAGATGCAGT+TGG | + | chr1.4:86025298-86025317 | None:intergenic | 60.0% | |
| TCTGCCACTGCTCCGCCAAA+GGG | - | chr1.4:86025304-86025323 | MS.gene029335:CDS | 60.0% | |
| ! | CTGGCTTGACCAGTGGGGAA+AGG | + | chr1.4:86026943-86026962 | None:intergenic | 60.0% |
| !! | ATTTTGGGAGGGGAGGGGAG+GGG | + | chr1.4:86027484-86027503 | None:intergenic | 60.0% |
| !! | GATTTTGGGAGGGGAGGGGA+GGG | + | chr1.4:86027485-86027504 | None:intergenic | 60.0% |
| !! | GGCATCACTGGCTTGACCAG+TGG | + | chr1.4:86026950-86026969 | None:intergenic | 60.0% |
| !! | TGATTTTGGGAGGGGAGGGG+AGG | + | chr1.4:86027486-86027505 | None:intergenic | 60.0% |
| ACCAACACCGGCGGCATCAC+TGG | + | chr1.4:86026962-86026981 | None:intergenic | 65.0% | |
| AGGGGAGGGGAGGAGCAATG+TGG | + | chr1.4:86027471-86027490 | None:intergenic | 65.0% | |
| CCCAACAGGCCTTTCCCCAC+TGG | - | chr1.4:86026931-86026950 | MS.gene029335:CDS | 65.0% | |
| GGGGAGGGGAGGAGCAATGT+GGG | + | chr1.4:86027470-86027489 | None:intergenic | 65.0% | |
| GGTCAAGCCAGTGATGCCGC+CGG | - | chr1.4:86026952-86026971 | MS.gene029335:CDS | 65.0% | |
| GTGGGGCAGCTGTCCTAGAC+TGG | + | chr1.4:86025432-86025451 | None:intergenic | 65.0% | |
| GCCAGTGATGCCGCCGGTGT+TGG | - | chr1.4:86026958-86026977 | MS.gene029335:CDS | 70.0% | |
| TTGGGAGGGGAGGGGAGGGG+AGG | + | chr1.4:86027481-86027500 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 86023995 | 86028273 | 86023995 | ID=MS.gene029335 |
| chr1.4 | mRNA | 86023995 | 86028273 | 86023995 | ID=MS.gene029335.t1;Parent=MS.gene029335 |
| chr1.4 | exon | 86028076 | 86028273 | 86028076 | ID=MS.gene029335.t1.exon1;Parent=MS.gene029335.t1 |
| chr1.4 | CDS | 86028076 | 86028273 | 86028076 | ID=cds.MS.gene029335.t1;Parent=MS.gene029335.t1 |
| chr1.4 | exon | 86027430 | 86027672 | 86027430 | ID=MS.gene029335.t1.exon2;Parent=MS.gene029335.t1 |
| chr1.4 | CDS | 86027430 | 86027672 | 86027430 | ID=cds.MS.gene029335.t1;Parent=MS.gene029335.t1 |
| chr1.4 | exon | 86027152 | 86027329 | 86027152 | ID=MS.gene029335.t1.exon3;Parent=MS.gene029335.t1 |
| chr1.4 | CDS | 86027152 | 86027329 | 86027152 | ID=cds.MS.gene029335.t1;Parent=MS.gene029335.t1 |
| chr1.4 | exon | 86026674 | 86026978 | 86026674 | ID=MS.gene029335.t1.exon4;Parent=MS.gene029335.t1 |
| chr1.4 | CDS | 86026674 | 86026978 | 86026674 | ID=cds.MS.gene029335.t1;Parent=MS.gene029335.t1 |
| chr1.4 | exon | 86025235 | 86025433 | 86025235 | ID=MS.gene029335.t1.exon5;Parent=MS.gene029335.t1 |
| chr1.4 | CDS | 86025235 | 86025433 | 86025235 | ID=cds.MS.gene029335.t1;Parent=MS.gene029335.t1 |
| chr1.4 | exon | 86024996 | 86025149 | 86024996 | ID=MS.gene029335.t1.exon6;Parent=MS.gene029335.t1 |
| chr1.4 | CDS | 86024996 | 86025149 | 86024996 | ID=cds.MS.gene029335.t1;Parent=MS.gene029335.t1 |
| chr1.4 | exon | 86024594 | 86024656 | 86024594 | ID=MS.gene029335.t1.exon7;Parent=MS.gene029335.t1 |
| chr1.4 | CDS | 86024594 | 86024656 | 86024594 | ID=cds.MS.gene029335.t1;Parent=MS.gene029335.t1 |
| chr1.4 | exon | 86024390 | 86024486 | 86024390 | ID=MS.gene029335.t1.exon8;Parent=MS.gene029335.t1 |
| chr1.4 | CDS | 86024390 | 86024486 | 86024390 | ID=cds.MS.gene029335.t1;Parent=MS.gene029335.t1 |
| chr1.4 | exon | 86023995 | 86024084 | 86023995 | ID=MS.gene029335.t1.exon9;Parent=MS.gene029335.t1 |
| chr1.4 | CDS | 86023995 | 86024084 | 86023995 | ID=cds.MS.gene029335.t1;Parent=MS.gene029335.t1 |
| Gene Sequence |
| Protein sequence |
