Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014282.t1 | XP_003603909.1 | 99.4 | 887 | 5 | 0 | 1 | 887 | 1 | 887 | 0.00E+00 | 1713.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014282.t1 | Q0WW26 | 84.6 | 887 | 136 | 1 | 1 | 887 | 1 | 886 | 0.0e+00 | 1478.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014282.t1 | G7J6K1 | 99.4 | 887 | 5 | 0 | 1 | 887 | 1 | 887 | 0.0e+00 | 1713.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014282 | MS.gene50735 | PPI |
| MS.gene014282 | MS.gene74984 | PPI |
| MS.gene014282 | MS.gene003673 | PPI |
| MS.gene014282 | MS.gene76243 | PPI |
| MS.gene014282 | MS.gene37394 | PPI |
| MS.gene014282 | MS.gene76242 | PPI |
| MS.gene014282 | MS.gene065068 | PPI |
| MS.gene014282 | MS.gene74983 | PPI |
| MS.gene014282 | MS.gene63417 | PPI |
| MS.gene014282 | MS.gene005784 | PPI |
| MS.gene014282 | MS.gene065067 | PPI |
| MS.gene014282 | MS.gene07800 | PPI |
| MS.gene014282 | MS.gene032230 | PPI |
| MS.gene014282 | MS.gene003672 | PPI |
| MS.gene014282 | MS.gene029334 | PPI |
| MS.gene014282 | MS.gene68093 | PPI |
| MS.gene014282 | MS.gene003223 | PPI |
| MS.gene014282 | MS.gene062888 | PPI |
| MS.gene014282 | MS.gene011220 | PPI |
| MS.gene014282 | MS.gene30333 | PPI |
| MS.gene014282 | MS.gene043279 | PPI |
| MS.gene014282 | MS.gene79635 | PPI |
| MS.gene21432 | MS.gene014282 | PPI |
| MS.gene014282 | MS.gene74768 | PPI |
| MS.gene014282 | MS.gene02789 | PPI |
| MS.gene014282 | MS.gene02023 | PPI |
| MS.gene014282 | MS.gene021666 | PPI |
| MS.gene014282 | MS.gene74608 | PPI |
| MS.gene014282 | MS.gene23325 | PPI |
| MS.gene014282 | MS.gene029335 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014282.t1 | MTR_3g116480 | 99.436 | 887 | 5 | 0 | 1 | 887 | 1 | 887 | 0.0 | 1808 |
| MS.gene014282.t1 | MTR_4g069920 | 90.203 | 888 | 83 | 2 | 1 | 887 | 1 | 885 | 0.0 | 1631 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014282.t1 | AT4G34450 | 84.555 | 887 | 136 | 1 | 1 | 887 | 1 | 886 | 0.0 | 1564 |
| MS.gene014282.t1 | AT2G16200 | 60.870 | 69 | 27 | 0 | 819 | 887 | 1 | 69 | 6.12e-24 | 96.3 |
| MS.gene014282.t1 | AT2G16200 | 61.538 | 65 | 25 | 0 | 823 | 887 | 19 | 83 | 2.72e-22 | 92.0 |
Find 201 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCCTGAGTAACATTCTT+AGG | 0.185985 | 3.1:+92077121 | MS.gene014282:CDS |
| CTCCAAGTGTGTTTAGATAA+AGG | 0.246814 | 3.1:-92078037 | None:intergenic |
| GTGCTTGTGCGGTTGTCTTT+TGG | 0.261791 | 3.1:+92081639 | MS.gene014282:CDS |
| AATACTGTCATCAACCTTCT+TGG | 0.299187 | 3.1:+92079218 | MS.gene014282:CDS |
| TGCTGCAGTTGATGAGTTAA+AGG | 0.303960 | 3.1:+92077520 | MS.gene014282:CDS |
| CAAGTGTATGAACCTTAAAA+AGG | 0.314495 | 3.1:-92078418 | None:intergenic |
| AATTTCATTGCAACATCCTT+TGG | 0.320288 | 3.1:-92081672 | None:intergenic |
| ATCCCTGATGCAAAGGAAAC+AGG | 0.331509 | 3.1:+92077207 | MS.gene014282:CDS |
| GTGTGGCAATGCTTCTGTTC+TGG | 0.335873 | 3.1:-92076819 | None:intergenic |
| CAAATCCTGAAATTGTAAAA+AGG | 0.336682 | 3.1:+92074365 | MS.gene014282:CDS |
| CACTAACTGCAACATTGATA+TGG | 0.336809 | 3.1:+92076780 | MS.gene014282:CDS |
| CCCTTTCATGGGAATTGAAA+AGG | 0.339316 | 3.1:+92073512 | MS.gene014282:CDS |
| AGTCTAAAGATATGGGATTA+AGG | 0.341479 | 3.1:+92073890 | MS.gene014282:CDS |
| ATTCCAGAGTTTGCAAACTT+TGG | 0.345897 | 3.1:+92078392 | MS.gene014282:CDS |
| GCTGTAAAGGACTTCCTGTT+TGG | 0.348577 | 3.1:+92078089 | MS.gene014282:CDS |
| GCTGCTATACCTACTGAATC+AGG | 0.351960 | 3.1:+92073723 | MS.gene014282:CDS |
| TTCCAGAGTTTGCAAACTTT+GGG | 0.353146 | 3.1:+92078393 | MS.gene014282:CDS |
| AACCCTGTTTCCTTTGCATC+AGG | 0.353442 | 3.1:-92077210 | None:intergenic |
| AGCTGAGTATTCCCCTTTCA+TGG | 0.357213 | 3.1:+92073500 | MS.gene014282:intron |
| GGTTGGGATTTGACTTCCTT+GGG | 0.363696 | 3.1:-92078266 | None:intergenic |
| TAATTGCTGGATTTAATTCT+CGG | 0.364724 | 3.1:-92076480 | None:intergenic |
| TCCAAGTGTGTTTAGATAAA+GGG | 0.365379 | 3.1:-92078036 | None:intergenic |
| TTTCTTCTCTGCAAGTGGTT+GGG | 0.373606 | 3.1:-92078282 | None:intergenic |
| AAGGTGGAGCAATGAGGTTC+AGG | 0.374504 | 3.1:+92074384 | MS.gene014282:CDS |
| TGATATCCCGCTTGTCAATC+TGG | 0.376165 | 3.1:+92078118 | MS.gene014282:CDS |
| GCTTCGGCCAAGCTCTCCCT+TGG | 0.377356 | 3.1:-92079191 | None:intergenic |
| CTTTCTTCTCTGCAAGTGGT+TGG | 0.377425 | 3.1:-92078283 | None:intergenic |
| TTGTTGTCGGGTGTATTCAT+AGG | 0.378216 | 3.1:+92081606 | MS.gene014282:CDS |
| CCAAGTGTTGGCACTCCCTC+AGG | 0.379387 | 3.1:-92078857 | None:intergenic |
| ACCATAGATACTACACTTCC+TGG | 0.389860 | 3.1:+92077379 | MS.gene014282:intron |
| TCATCCACTCGCTCACAATC+AGG | 0.394231 | 3.1:-92079155 | None:intergenic |
| TGGTTGGGATTTGACTTCCT+TGG | 0.403046 | 3.1:-92078267 | None:intergenic |
| ACATGTGTGTGATCTTGAAT+TGG | 0.404356 | 3.1:-92081583 | None:intergenic |
| AGCTGAAGAACAGTAATTGC+TGG | 0.405937 | 3.1:-92076493 | None:intergenic |
| TGATATGCATCAGCTGTTGA+TGG | 0.408594 | 3.1:-92078353 | None:intergenic |
| TGAATACCAGCTAGAGGATC+TGG | 0.409994 | 3.1:+92079061 | MS.gene014282:CDS |
| ACTCTCAAGAAAATCATAGA+AGG | 0.412468 | 3.1:-92076383 | None:intergenic |
| TCAGGAAATAATACACAGTC+AGG | 0.414520 | 3.1:+92076352 | MS.gene014282:CDS |
| AATGGTGTATCTGATGATAA+AGG | 0.416830 | 3.1:+92073915 | MS.gene014282:CDS |
| TTCCCAAAGTTTGCAAACTC+TGG | 0.416924 | 3.1:-92078395 | None:intergenic |
| CCTTTCATGGGAATTGAAAA+GGG | 0.417082 | 3.1:+92073513 | MS.gene014282:CDS |
| CTGTAAAGGACTTCCTGTTT+GGG | 0.418816 | 3.1:+92078090 | MS.gene014282:CDS |
| TTGTAGGTTATCCGTGAGTC+AGG | 0.424440 | 3.1:+92076334 | MS.gene014282:intron |
| ATCTGTCCAGGTGAATCATA+TGG | 0.426484 | 3.1:-92078815 | None:intergenic |
| TGCACTGGGTTTGCTGCACC+AGG | 0.428277 | 3.1:+92074444 | MS.gene014282:CDS |
| TGTATTCATAGGAAATATAA+AGG | 0.434356 | 3.1:+92081617 | MS.gene014282:CDS |
| AAAGAAAACTTCTGTGGCTT+CGG | 0.436034 | 3.1:-92073848 | None:intergenic |
| ACAGCAGCAAATCTTAAAAC+TGG | 0.438071 | 3.1:-92076535 | None:intergenic |
| ACATGTTCTAATAATTGCTC+TGG | 0.438709 | 3.1:-92078639 | None:intergenic |
| AAGGCAGCACTCGCAACAAT+TGG | 0.441719 | 3.1:-92074227 | None:intergenic |
| CTACACTTCCTGGGAATTGA+AGG | 0.445284 | 3.1:+92077389 | MS.gene014282:CDS |
| TCGTGTTTGTGCAGTTGTAC+TGG | 0.450538 | 3.1:-92078614 | None:intergenic |
| TTAATCCCATATCTTTAGAC+TGG | 0.453175 | 3.1:-92073888 | None:intergenic |
| GTGAGCACACTGGCAAAGTT+TGG | 0.453513 | 3.1:+92077497 | MS.gene014282:CDS |
| TAGATGAATGCCACTGACTA+AGG | 0.465517 | 3.1:-92074246 | None:intergenic |
| ACAAAGGCTTACCTTGTTCA+AGG | 0.466919 | 3.1:-92076563 | None:intergenic |
| CTTCGGCCAAGCTCTCCCTT+GGG | 0.468883 | 3.1:-92079190 | None:intergenic |
| TTTCCTGAGTAACATTCTTA+GGG | 0.469038 | 3.1:+92077122 | MS.gene014282:CDS |
| TGCAGTTAGTGACTGATGTT+GGG | 0.469707 | 3.1:-92076768 | None:intergenic |
| CCTGAGGGAGTGCCAACACT+TGG | 0.469769 | 3.1:+92078857 | MS.gene014282:CDS |
| GGATATCAAATGGCCCAAAC+AGG | 0.470482 | 3.1:-92078103 | None:intergenic |
| GATGACAGTATTTACAGCTT+CGG | 0.472343 | 3.1:-92079207 | None:intergenic |
| TGGAAGAGACTTGAGAGGCT+TGG | 0.479961 | 3.1:-92078795 | None:intergenic |
| GATATGCATCAGCTGTTGAT+GGG | 0.483197 | 3.1:-92078352 | None:intergenic |
| ATGATCCACAATTAGATGCT+AGG | 0.484554 | 3.1:+92073565 | MS.gene014282:CDS |
| ATCACACACATGTTTGTTGT+CGG | 0.484824 | 3.1:+92081593 | MS.gene014282:CDS |
| TGTCACAAGCTCTCTTATGA+AGG | 0.484923 | 3.1:+92074082 | MS.gene014282:CDS |
| ATCAACAGGCACTGGGCTAA+AGG | 0.485148 | 3.1:-92076225 | None:intergenic |
| ATGAAACGAATATATTTGCT+AGG | 0.487145 | 3.1:-92077428 | None:intergenic |
| TGTGAGCGAGTGGATGAGTA+TGG | 0.487810 | 3.1:+92079161 | MS.gene014282:CDS |
| TCACACACATGTTTGTTGTC+GGG | 0.490724 | 3.1:+92081594 | MS.gene014282:CDS |
| TGTTCAGGTTATCGTAATTG+TGG | 0.491311 | 3.1:+92078736 | MS.gene014282:intron |
| CTTCAGCCTCACCAGTGGTC+GGG | 0.493984 | 3.1:-92079022 | None:intergenic |
| GATGATGACCGCGACGATGA+AGG | 0.496667 | 3.1:+92072964 | MS.gene014282:CDS |
| TCTTGGCCCAAGGGAGAGCT+TGG | 0.497009 | 3.1:+92079184 | MS.gene014282:CDS |
| TCAGCTTCAGTGAGCTCCAC+AGG | 0.501358 | 3.1:-92078537 | None:intergenic |
| CAGTGGCATTCATCTACTAC+AGG | 0.502394 | 3.1:+92074253 | MS.gene014282:CDS |
| CTAAACACACTTGGAGGTGA+TGG | 0.503784 | 3.1:+92078044 | MS.gene014282:CDS |
| CCTACGTCACAAGTCAGAAA+TGG | 0.504171 | 3.1:+92076408 | MS.gene014282:CDS |
| TGTAACGAATCAACAGGCAC+TGG | 0.507041 | 3.1:-92076233 | None:intergenic |
| GAGGCTTTCTTCTCTGCAAG+TGG | 0.508958 | 3.1:-92078287 | None:intergenic |
| GTTGATTCGTTACACAAGTC+AGG | 0.509253 | 3.1:+92076242 | MS.gene014282:CDS |
| AGCAGATTACACATTGAAAG+TGG | 0.510396 | 3.1:+92079094 | MS.gene014282:CDS |
| TGAGACTGATAAAGCTGTAA+AGG | 0.512160 | 3.1:+92078076 | MS.gene014282:CDS |
| CTTTATCTAAACACACTTGG+AGG | 0.512500 | 3.1:+92078038 | MS.gene014282:CDS |
| GGGCAGTTCTTCAGGAAGCA+AGG | 0.513040 | 3.1:+92073535 | MS.gene014282:CDS |
| AGTAACATTCTTAGGGAAGA+AGG | 0.515461 | 3.1:+92077129 | MS.gene014282:CDS |
| CGAGTGGATGAGTATGGTCT+TGG | 0.517300 | 3.1:+92079167 | MS.gene014282:CDS |
| ATTGAGCTCTGTAATAGCTC+TGG | 0.517722 | 3.1:-92076446 | None:intergenic |
| CACAAGGCTGCAAGCCAAGA+AGG | 0.517906 | 3.1:-92079232 | None:intergenic |
| TTAGAAAATTTCCCAAGTGT+TGG | 0.518435 | 3.1:-92078869 | None:intergenic |
| TTTGTACAGTTTCATGCACT+GGG | 0.519283 | 3.1:+92074430 | MS.gene014282:CDS |
| TTGACAAGCGGGATATCAAA+TGG | 0.520695 | 3.1:-92078113 | None:intergenic |
| TCTTGGCTTGCAGCCTTGTG+AGG | 0.521858 | 3.1:+92079235 | MS.gene014282:CDS |
| AGATGCTAGGAGATGCTCAC+AGG | 0.523187 | 3.1:+92073578 | MS.gene014282:CDS |
| TGCCAGTGTGCTCACAGCAC+CGG | 0.525008 | 3.1:-92077489 | None:intergenic |
| ACCCTTTATCTAAACACACT+TGG | 0.526555 | 3.1:+92078035 | MS.gene014282:CDS |
| AGCTTGTTAGCAGCTTGACA+AGG | 0.527263 | 3.1:+92076187 | MS.gene014282:CDS |
| CAGGAATGCATGGGAAAGCA+TGG | 0.529009 | 3.1:+92079130 | MS.gene014282:CDS |
| CTTCCCTAAGAATGTTACTC+AGG | 0.529688 | 3.1:-92077125 | None:intergenic |
| TTGCAGTTAGTGACTGATGT+TGG | 0.530937 | 3.1:-92076769 | None:intergenic |
| TTTCAGGTTGACCCGACCAC+TGG | 0.531469 | 3.1:+92079011 | MS.gene014282:intron |
| AATACCGCTCAATTTGTGCC+AGG | 0.533594 | 3.1:-92074178 | None:intergenic |
| TCCCTGATGCAAAGGAAACA+GGG | 0.533650 | 3.1:+92077208 | MS.gene014282:CDS |
| TATCTAATTTCAGGAATGCA+TGG | 0.536835 | 3.1:+92079120 | MS.gene014282:CDS |
| AGATATGGGATTAAGGAGAA+TGG | 0.538106 | 3.1:+92073897 | MS.gene014282:CDS |
| CGATCTCCAGATCCTCTAGC+TGG | 0.539710 | 3.1:-92079067 | None:intergenic |
| GCTAGCCACAATCTCATGAA+TGG | 0.540300 | 3.1:-92081730 | None:intergenic |
| TCTTCAGCCTCACCAGTGGT+CGG | 0.543872 | 3.1:-92079023 | None:intergenic |
| TGCAGATACGACAGAATGAT+CGG | 0.545783 | 3.1:+92076151 | MS.gene014282:intron |
| GGCAGTTCTTCAGGAAGCAA+GGG | 0.545910 | 3.1:+92073536 | MS.gene014282:CDS |
| TATCACAGACGGAACCCTCC+TGG | 0.546089 | 3.1:+92074160 | MS.gene014282:CDS |
| ATCACTGACAGTTTCATCCT+CGG | 0.547476 | 3.1:-92081706 | None:intergenic |
| GACTTGTGTAACGAATCAAC+AGG | 0.547682 | 3.1:-92076239 | None:intergenic |
| ATGAGTATGGTCTTGGCCCA+AGG | 0.547932 | 3.1:+92079174 | MS.gene014282:CDS |
| TGAAACGAATATATTTGCTA+GGG | 0.549359 | 3.1:-92077427 | None:intergenic |
| TCATCATCTTTCTTCACGAG+TGG | 0.549801 | 3.1:-92072949 | None:intergenic |
| AAAGTTTGCAAACTCTGGAA+TGG | 0.551843 | 3.1:-92078390 | None:intergenic |
| TGCTGTTCGCACCTTGAACA+AGG | 0.552650 | 3.1:+92076552 | MS.gene014282:CDS |
| TTACCAGTCCTCAGCGCCTG+TGG | 0.552709 | 3.1:+92078521 | MS.gene014282:intron |
| ACCCTGTTTCCTTTGCATCA+GGG | 0.556360 | 3.1:-92077209 | None:intergenic |
| ATGTCAAAAGCCTCTTCTGA+AGG | 0.557152 | 3.1:-92078233 | None:intergenic |
| TAGTCTCCAGATTGACAAGC+GGG | 0.559078 | 3.1:-92078124 | None:intergenic |
| GTGTATTATTTCCTGACTCA+CGG | 0.561221 | 3.1:-92076345 | None:intergenic |
| CATGTGTGTGATCTTGAATT+GGG | 0.562867 | 3.1:-92081582 | None:intergenic |
| GCTGAGTATTCCCCTTTCAT+GGG | 0.563911 | 3.1:+92073501 | MS.gene014282:intron |
| TAGAGAAATCCCTGATGCAA+AGG | 0.564716 | 3.1:+92077200 | MS.gene014282:CDS |
| GCAGATTACACATTGAAAGT+GGG | 0.566190 | 3.1:+92079095 | MS.gene014282:CDS |
| CACCACTGGCTTACCTCACA+AGG | 0.566963 | 3.1:-92079248 | None:intergenic |
| CATCCACTCGCTCACAATCA+GGG | 0.568503 | 3.1:-92079154 | None:intergenic |
| ATCTAATTTCAGGAATGCAT+GGG | 0.569745 | 3.1:+92079121 | MS.gene014282:CDS |
| CCGCTCAATTTGTGCCAGGA+GGG | 0.571229 | 3.1:-92074174 | None:intergenic |
| TGACATTGATTCTGTGCCCA+AGG | 0.571264 | 3.1:+92078250 | MS.gene014282:CDS |
| CCATAGATACTACACTTCCT+GGG | 0.571583 | 3.1:+92077380 | MS.gene014282:intron |
| TGAGTATGGTCTTGGCCCAA+GGG | 0.575644 | 3.1:+92079175 | MS.gene014282:CDS |
| CTCTCAAGAAAATCATAGAA+GGG | 0.578640 | 3.1:-92076382 | None:intergenic |
| CTTGCAGAGAAGAAAGCCTC+TGG | 0.580181 | 3.1:+92078290 | MS.gene014282:CDS |
| CATCTCCTAGCATCTAATTG+TGG | 0.589567 | 3.1:-92073570 | None:intergenic |
| GTTTGCAAACTCTGGAATGG+AGG | 0.589800 | 3.1:-92078387 | None:intergenic |
| AAGTGTAGTAATAGCAAGTG+TGG | 0.589942 | 3.1:-92076836 | None:intergenic |
| ATTACAGGAGCCTTCAGAAG+AGG | 0.591072 | 3.1:+92078223 | MS.gene014282:intron |
| TCTGAAGTTTATTGTTCGAG+AGG | 0.592844 | 3.1:+92078895 | MS.gene014282:CDS |
| GAGAATGCAACAGTGAGGGC+CGG | 0.593593 | 3.1:+92077470 | MS.gene014282:CDS |
| CTGCTATACCTACTGAATCA+GGG | 0.594281 | 3.1:+92073724 | MS.gene014282:CDS |
| CTGAGGGAGTGCCAACACTT+GGG | 0.595169 | 3.1:+92078858 | MS.gene014282:CDS |
| TCTTGAGAATGCAACAGTGA+GGG | 0.598523 | 3.1:+92077466 | MS.gene014282:CDS |
| GCTTGTTAGCAGCTTGACAA+GGG | 0.599912 | 3.1:+92076188 | MS.gene014282:CDS |
| GACAGGAAATGAATCAAGTG+TGG | 0.601757 | 3.1:+92076864 | MS.gene014282:CDS |
| ACCGCTCAATTTGTGCCAGG+AGG | 0.606317 | 3.1:-92074175 | None:intergenic |
| AGAGCTATTACAGAGCTCAA+TGG | 0.608497 | 3.1:+92076448 | MS.gene014282:CDS |
| GTAACGAATCAACAGGCACT+GGG | 0.608764 | 3.1:-92076232 | None:intergenic |
| CAAGTCACCTCGTCTGCAGA+GGG | 0.609015 | 3.1:-92073946 | None:intergenic |
| GGAGGAGCACCCAAACCAGT+TGG | 0.609607 | 3.1:-92078320 | None:intergenic |
| ACAAGTCACCTCGTCTGCAG+AGG | 0.609964 | 3.1:-92073947 | None:intergenic |
| CAGATTACACATTGAAAGTG+GGG | 0.612267 | 3.1:+92079096 | MS.gene014282:CDS |
| TCTCTTCCATATGATTCACC+TGG | 0.612987 | 3.1:+92078809 | MS.gene014282:CDS |
| AGGAATGCATGGGAAAGCAT+GGG | 0.615686 | 3.1:+92079131 | MS.gene014282:CDS |
| AAGTCTCTCCCTGATTCAGT+AGG | 0.615879 | 3.1:-92073732 | None:intergenic |
| GAAATATAAAGGTGCTTGTG+CGG | 0.616618 | 3.1:+92081628 | MS.gene014282:CDS |
| GTGGCATTTGAGAAGCCTGA+GGG | 0.617748 | 3.1:+92078842 | MS.gene014282:CDS |
| ACTGGTGAGGCTGAAGATGA+TGG | 0.618692 | 3.1:+92079029 | MS.gene014282:CDS |
| ATATGCATCAGCTGTTGATG+GGG | 0.619854 | 3.1:-92078351 | None:intergenic |
| GATATCTCCCTCTGCAGACG+AGG | 0.620675 | 3.1:+92073939 | MS.gene014282:CDS |
| CAGGAAATAATACACAGTCA+GGG | 0.625927 | 3.1:+92076353 | MS.gene014282:CDS |
| GATACGACACAGCACTCGAA+TGG | 0.627712 | 3.1:-92074141 | None:intergenic |
| CTTTCATGGGAATTGAAAAG+GGG | 0.630111 | 3.1:+92073514 | MS.gene014282:CDS |
| GGTTTGGGTGCTCCTCCAAG+TGG | 0.630511 | 3.1:+92078326 | MS.gene014282:CDS |
| AACATTCTTAGGGAAGAAGG+TGG | 0.632595 | 3.1:+92077132 | MS.gene014282:CDS |
| TGTTAGCAGCTTGACAAGGG+GGG | 0.633188 | 3.1:+92076191 | MS.gene014282:CDS |
| GGGCCCTGATTGTGAGCGAG+TGG | 0.633246 | 3.1:+92079151 | MS.gene014282:CDS |
| TGATGCCATTCATGAGATTG+TGG | 0.633282 | 3.1:+92081725 | MS.gene014282:CDS |
| CTTGTTAGCAGCTTGACAAG+GGG | 0.635426 | 3.1:+92076189 | MS.gene014282:CDS |
| AGTGAGCTCCACAGGCGCTG+AGG | 0.636968 | 3.1:-92078529 | None:intergenic |
| CAAGAAAATCATAGAAGGGG+CGG | 0.644100 | 3.1:-92076378 | None:intergenic |
| CCCTCCTGGCACAAATTGAG+CGG | 0.644481 | 3.1:+92074174 | MS.gene014282:CDS |
| TCATATGGAAGAGACTTGAG+AGG | 0.644642 | 3.1:-92078800 | None:intergenic |
| AGGAAATAATACACAGTCAG+GGG | 0.645045 | 3.1:+92076354 | MS.gene014282:CDS |
| TGAATTGGGTGGAACAACCT+CGG | 0.646733 | 3.1:-92081568 | None:intergenic |
| TACACTTCCTGGGAATTGAA+GGG | 0.647378 | 3.1:+92077390 | MS.gene014282:CDS |
| TCTCAAGAAAATCATAGAAG+GGG | 0.647603 | 3.1:-92076381 | None:intergenic |
| GGTTGACCCGACCACTGGTG+AGG | 0.653086 | 3.1:+92079016 | MS.gene014282:intron |
| CCATTTCTGACTTGTGACGT+AGG | 0.654222 | 3.1:-92076408 | None:intergenic |
| TTGTTAGCAGCTTGACAAGG+GGG | 0.655135 | 3.1:+92076190 | MS.gene014282:CDS |
| TGTGGCATTTGAGAAGCCTG+AGG | 0.655854 | 3.1:+92078841 | MS.gene014282:CDS |
| GAAATTGACTGTCAGATCCG+AGG | 0.656407 | 3.1:+92081689 | MS.gene014282:CDS |
| ATCATCTTCAGCCTCACCAG+TGG | 0.659428 | 3.1:-92079027 | None:intergenic |
| TGAAGATGAATACCAGCTAG+AGG | 0.659647 | 3.1:+92079055 | MS.gene014282:CDS |
| GGCCGGTGCTGTGAGCACAC+TGG | 0.659994 | 3.1:+92077487 | MS.gene014282:CDS |
| GACAGCAAAGAAAACTTCTG+TGG | 0.662155 | 3.1:-92073854 | None:intergenic |
| GTGTGTGATCTTGAATTGGG+TGG | 0.662717 | 3.1:-92081579 | None:intergenic |
| GTGGGCTGTGCAGGGTACCG+AGG | 0.663992 | 3.1:+92081551 | MS.gene014282:intron |
| CTTAGCAAAACAAATATGCG+CGG | 0.667793 | 3.1:-92077658 | None:intergenic |
| GTGCTGTGTCGTATCACAGA+CGG | 0.669972 | 3.1:+92074149 | MS.gene014282:CDS |
| TTTCATGGGAATTGAAAAGG+GGG | 0.673800 | 3.1:+92073515 | MS.gene014282:CDS |
| GCGAGTGCTGCCTTAGTCAG+TGG | 0.676555 | 3.1:+92074236 | MS.gene014282:CDS |
| ATCTTGAGAATGCAACAGTG+AGG | 0.681270 | 3.1:+92077465 | MS.gene014282:CDS |
| CTAGTCTCCAGATTGACAAG+CGG | 0.684081 | 3.1:-92078125 | None:intergenic |
| ATTCATGAGATTGTGGCTAG+CGG | 0.684649 | 3.1:+92081732 | MS.gene014282:CDS |
| AGATTACACATTGAAAGTGG+GGG | 0.686745 | 3.1:+92079097 | MS.gene014282:CDS |
| GTTCACTTATCTGTCTACGC+AGG | 0.694862 | 3.1:+92077266 | MS.gene014282:CDS |
| TATGCATCAGCTGTTGATGG+GGG | 0.711908 | 3.1:-92078350 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 92072940 | 92081758 | 92072940 | ID=MS.gene014282 |
| chr3.1 | mRNA | 92072940 | 92081758 | 92072940 | ID=MS.gene014282.t1;Parent=MS.gene014282 |
| chr3.1 | exon | 92072940 | 92072985 | 92072940 | ID=MS.gene014282.t1.exon1;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92072940 | 92072985 | 92072940 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92073502 | 92073599 | 92073502 | ID=MS.gene014282.t1.exon2;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92073502 | 92073599 | 92073502 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92073712 | 92073762 | 92073712 | ID=MS.gene014282.t1.exon3;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92073712 | 92073762 | 92073712 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92073847 | 92073960 | 92073847 | ID=MS.gene014282.t1.exon4;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92073847 | 92073960 | 92073847 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92074074 | 92074274 | 92074074 | ID=MS.gene014282.t1.exon5;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92074074 | 92074274 | 92074074 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92074364 | 92074465 | 92074364 | ID=MS.gene014282.t1.exon6;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92074364 | 92074465 | 92074364 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92076156 | 92076263 | 92076156 | ID=MS.gene014282.t1.exon7;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92076156 | 92076263 | 92076156 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92076340 | 92076573 | 92076340 | ID=MS.gene014282.t1.exon8;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92076340 | 92076573 | 92076340 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92076754 | 92077004 | 92076754 | ID=MS.gene014282.t1.exon9;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92076754 | 92077004 | 92076754 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92077116 | 92077287 | 92077116 | ID=MS.gene014282.t1.exon10;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92077116 | 92077287 | 92077116 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92077386 | 92077541 | 92077386 | ID=MS.gene014282.t1.exon11;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92077386 | 92077541 | 92077386 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92077658 | 92077708 | 92077658 | ID=MS.gene014282.t1.exon12;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92077658 | 92077708 | 92077658 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92078020 | 92078160 | 92078020 | ID=MS.gene014282.t1.exon13;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92078020 | 92078160 | 92078020 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92078230 | 92078427 | 92078230 | ID=MS.gene014282.t1.exon14;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92078230 | 92078427 | 92078230 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92078528 | 92078659 | 92078528 | ID=MS.gene014282.t1.exon15;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92078528 | 92078659 | 92078528 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92078743 | 92078916 | 92078743 | ID=MS.gene014282.t1.exon16;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92078743 | 92078916 | 92078743 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92079017 | 92079256 | 92079017 | ID=MS.gene014282.t1.exon17;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92079017 | 92079256 | 92079017 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| chr3.1 | exon | 92081564 | 92081758 | 92081564 | ID=MS.gene014282.t1.exon18;Parent=MS.gene014282.t1 |
| chr3.1 | CDS | 92081564 | 92081758 | 92081564 | ID=cds.MS.gene014282.t1;Parent=MS.gene014282.t1 |
| Gene Sequence |
| Protein sequence |
