Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034150.t1 | XP_013454585.1 | 100 | 951 | 0 | 0 | 1 | 951 | 1 | 951 | 0.00E+00 | 1815 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034150.t1 | Q9SV21 | 81.3 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0e+00 | 1520.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034150.t1 | A0A072UGQ1 | 100.0 | 951 | 0 | 0 | 1 | 951 | 1 | 951 | 0.0e+00 | 1815.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034150 | MS.gene02023 | PPI |
| MS.gene034150 | MS.gene74608 | PPI |
| MS.gene034150 | MS.gene029335 | PPI |
| MS.gene034150 | MS.gene053143 | PPI |
| MS.gene034150 | MS.gene74984 | PPI |
| MS.gene034150 | MS.gene76243 | PPI |
| MS.gene034150 | MS.gene02789 | PPI |
| MS.gene034150 | MS.gene054585 | PPI |
| MS.gene034150 | MS.gene74983 | PPI |
| MS.gene029334 | MS.gene034150 | PPI |
| MS.gene034150 | MS.gene065067 | PPI |
| MS.gene034150 | MS.gene065068 | PPI |
| MS.gene034150 | MS.gene63417 | PPI |
| MS.gene034150 | MS.gene003223 | PPI |
| MS.gene76242 | MS.gene034150 | PPI |
| MS.gene034150 | MS.gene38302 | PPI |
| MS.gene053143 | MS.gene034150 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034150.t1 | MTR_4g008250 | 100.000 | 951 | 0 | 0 | 1 | 951 | 1 | 951 | 0.0 | 1955 |
| MS.gene034150.t1 | MTR_7g112920 | 66.667 | 291 | 76 | 6 | 43 | 330 | 1 | 273 | 1.94e-114 | 352 |
| MS.gene034150.t1 | MTR_3g071150 | 82.258 | 186 | 18 | 2 | 1 | 186 | 1 | 171 | 8.56e-93 | 294 |
| MS.gene034150.t1 | MTR_4g132140 | 72.034 | 118 | 22 | 1 | 94 | 211 | 1 | 107 | 3.92e-50 | 172 |
| MS.gene034150.t1 | MTR_7g112940 | 68.367 | 98 | 25 | 2 | 856 | 951 | 52 | 145 | 1.34e-33 | 126 |
| MS.gene034150.t1 | MTR_5g019590 | 70.312 | 64 | 19 | 0 | 610 | 673 | 73 | 136 | 1.64e-22 | 95.1 |
| MS.gene034150.t1 | MTR_4g132130 | 64.384 | 73 | 24 | 2 | 314 | 385 | 1 | 72 | 2.00e-22 | 92.4 |
| MS.gene034150.t1 | MTR_6g051970 | 63.077 | 65 | 18 | 1 | 137 | 201 | 1 | 59 | 3.73e-21 | 88.2 |
| MS.gene034150.t1 | MTR_6g089270 | 56.250 | 80 | 29 | 1 | 128 | 207 | 1 | 74 | 1.80e-19 | 84.0 |
| MS.gene034150.t1 | MTR_4g076210 | 21.674 | 466 | 312 | 12 | 21 | 461 | 19 | 456 | 9.94e-15 | 79.3 |
| MS.gene034150.t1 | MTR_6g044465 | 51.250 | 80 | 34 | 1 | 594 | 673 | 1 | 75 | 1.57e-14 | 70.1 |
| MS.gene034150.t1 | MTR_3g008780 | 65.385 | 52 | 18 | 0 | 622 | 673 | 88 | 139 | 5.21e-14 | 71.2 |
| MS.gene034150.t1 | MTR_4g008310 | 100.000 | 35 | 0 | 0 | 884 | 918 | 41 | 75 | 5.86e-14 | 74.7 |
| MS.gene034150.t1 | MTR_7g056277 | 67.857 | 56 | 18 | 0 | 618 | 673 | 198 | 253 | 6.56e-14 | 76.3 |
| MS.gene034150.t1 | MTR_6g046370 | 63.462 | 52 | 19 | 0 | 622 | 673 | 8 | 59 | 2.39e-13 | 66.6 |
| MS.gene034150.t1 | MTR_8g470140 | 63.462 | 52 | 19 | 0 | 622 | 673 | 8 | 59 | 2.93e-13 | 65.9 |
| MS.gene034150.t1 | MTR_2g074950 | 63.462 | 52 | 19 | 0 | 622 | 673 | 25 | 76 | 4.86e-13 | 65.9 |
| MS.gene034150.t1 | MTR_0576s0010 | 61.538 | 52 | 20 | 0 | 622 | 673 | 13 | 64 | 8.08e-13 | 65.1 |
| MS.gene034150.t1 | MTR_3g024060 | 63.462 | 52 | 19 | 0 | 622 | 673 | 131 | 182 | 4.50e-12 | 66.2 |
| MS.gene034150.t1 | MTR_4g069920 | 22.816 | 412 | 267 | 13 | 36 | 422 | 48 | 433 | 1.49e-11 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034150.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene034150.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene034150.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene034150.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene034150.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene034150.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene034150.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene034150.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 24 | 971 | 0.0 | 1621 |
| MS.gene034150.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 24 | 971 | 0.0 | 1621 |
| MS.gene034150.t1 | AT4G31490 | 81.013 | 948 | 178 | 2 | 1 | 948 | 1 | 946 | 0.0 | 1610 |
| MS.gene034150.t1 | AT4G31490 | 81.013 | 948 | 178 | 2 | 1 | 948 | 1 | 946 | 0.0 | 1610 |
| MS.gene034150.t1 | AT4G31490 | 81.013 | 948 | 178 | 2 | 1 | 948 | 1 | 946 | 0.0 | 1610 |
| MS.gene034150.t1 | AT4G23460 | 21.245 | 466 | 314 | 12 | 21 | 461 | 19 | 456 | 2.82e-14 | 77.8 |
| MS.gene034150.t1 | AT4G11380 | 21.459 | 466 | 313 | 12 | 21 | 461 | 19 | 456 | 2.95e-13 | 74.7 |
| MS.gene034150.t1 | AT4G11380 | 21.369 | 482 | 321 | 13 | 5 | 461 | 30 | 478 | 1.54e-12 | 72.4 |
Find 214 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATCTGTTTGCTTGATTC+TGG | 0.132054 | 4.4:-90064816 | None:intergenic |
| TCTTGTGCTCTGTGGATTAT+TGG | 0.193178 | 4.4:+90063527 | MS.gene034150:CDS |
| GAAAGTTTGTAGGAATAATA+AGG | 0.193674 | 4.4:+90062866 | MS.gene034150:CDS |
| TACTTGTGCTATTAAGTTTC+CGG | 0.200425 | 4.4:+90063325 | MS.gene034150:CDS |
| TTGAGATCTCTGATTCTTTC+GGG | 0.206526 | 4.4:+90063815 | MS.gene034150:CDS |
| TTCTATCATCACTAGGCTTT+TGG | 0.218921 | 4.4:+90063469 | MS.gene034150:CDS |
| CTTTCGGGTGATTTCTTCCT+TGG | 0.227308 | 4.4:+90063830 | MS.gene034150:CDS |
| TGACAGATTAGGATCATTTC+AGG | 0.238060 | 4.4:-90062450 | None:intergenic |
| ACGAGCTTAAGAGGGATAAT+AGG | 0.244193 | 4.4:+90063087 | MS.gene034150:CDS |
| ATCCTCAGAGATGGTGTAAA+AGG | 0.264720 | 4.4:-90063621 | None:intergenic |
| ATGTTTGGAGTTAGCAACTA+TGG | 0.269674 | 4.4:+90064749 | MS.gene034150:CDS |
| CTTGAGATCTCTGATTCTTT+CGG | 0.271553 | 4.4:+90063814 | MS.gene034150:CDS |
| GAGGGATAATAGGGAGATTA+TGG | 0.272228 | 4.4:+90063097 | MS.gene034150:CDS |
| GCATTTGTTGATGGATTTCT+TGG | 0.285633 | 4.4:+90063367 | MS.gene034150:CDS |
| CAGGGATCTCTGTCTTCTAT+TGG | 0.298380 | 4.4:+90063788 | MS.gene034150:CDS |
| AAGGTTTCTTCCACTGAAAC+TGG | 0.299306 | 4.4:+90064849 | MS.gene034150:CDS |
| TTCGAGAGATTCTTTGATTT+CGG | 0.304898 | 4.4:-90062235 | None:intergenic |
| TTTCGGGTGATTTCTTCCTT+GGG | 0.305867 | 4.4:+90063831 | MS.gene034150:CDS |
| TGGATACTTTCTATCAGATT+CGG | 0.310141 | 4.4:+90063489 | MS.gene034150:CDS |
| GCAAGATGAGAGGGAGTTCC+TGG | 0.315233 | 4.4:+90066666 | MS.gene034150:CDS |
| ACAGTTACAAATGGTGGTTT+TGG | 0.320506 | 4.4:+90062833 | MS.gene034150:CDS |
| TAGGGAGATTATGGTTGATA+TGG | 0.324072 | 4.4:+90063106 | MS.gene034150:CDS |
| GCAATTATGCTTCTCCTTAA+CGG | 0.324388 | 4.4:+90062297 | MS.gene034150:CDS |
| AGGGAATTGCTCTGAGTCTT+GGG | 0.325449 | 4.4:+90067180 | MS.gene034150:CDS |
| GATTATGGTTGATATGGTTA+TGG | 0.347749 | 4.4:+90063112 | MS.gene034150:CDS |
| ATATGGTTATGGATGTCCTT+AGG | 0.354045 | 4.4:+90063123 | MS.gene034150:CDS |
| GGATACTTTCTATCAGATTC+GGG | 0.357062 | 4.4:+90063490 | MS.gene034150:CDS |
| ACTCGACCACTGTGTCTTCT+AGG | 0.357892 | 4.4:+90063684 | MS.gene034150:CDS |
| AACTCTCCAGAATTTATGTT+TGG | 0.360698 | 4.4:+90064734 | MS.gene034150:CDS |
| TGCTATTAAGTTTCCGGAGG+TGG | 0.364681 | 4.4:+90063331 | MS.gene034150:CDS |
| ATGATAGAAACACGCAGCTT+AGG | 0.375297 | 4.4:-90063455 | None:intergenic |
| TTCCTTCTAATATCATGATT+AGG | 0.375355 | 4.4:-90063158 | None:intergenic |
| TGTTGAGAAATTTCTTGTTT+CGG | 0.377476 | 4.4:+90062698 | MS.gene034150:CDS |
| TACTGTTGTGCATTTGTTGA+TGG | 0.380765 | 4.4:+90063358 | MS.gene034150:CDS |
| ACTGAAACTGGAGTTATATT+CGG | 0.381365 | 4.4:+90064861 | MS.gene034150:CDS |
| AAAGTTTGTAGGAATAATAA+GGG | 0.384005 | 4.4:+90062867 | MS.gene034150:CDS |
| TATTGATAGGATCATTGATT+GGG | 0.384961 | 4.4:+90062806 | MS.gene034150:CDS |
| CTAACTCCAAACATAAATTC+TGG | 0.384969 | 4.4:-90064740 | None:intergenic |
| CTCCTAATCATGATATTAGA+AGG | 0.385310 | 4.4:+90063156 | MS.gene034150:CDS |
| TGAGTATTGTTTGTCTCTTT+CGG | 0.395014 | 4.4:+90063550 | MS.gene034150:CDS |
| TTCACAGTCCTTGTTGATCA+TGG | 0.398314 | 4.4:+90063937 | MS.gene034150:CDS |
| ATCGGCTTAACGAGCTTAAG+AGG | 0.398378 | 4.4:+90063078 | MS.gene034150:CDS |
| CGAGCTTAAGAGGGATAATA+GGG | 0.400973 | 4.4:+90063088 | MS.gene034150:CDS |
| ATATTGATAGGATCATTGAT+TGG | 0.404295 | 4.4:+90062805 | MS.gene034150:CDS |
| ATTAGATTGCTGTGTAATAC+TGG | 0.411143 | 4.4:+90064040 | MS.gene034150:CDS |
| CTCTGAGGATGGAGAGGGTC+AGG | 0.412565 | 4.4:+90063634 | MS.gene034150:CDS |
| CAGGGAATTGCTCTGAGTCT+TGG | 0.412830 | 4.4:+90067179 | MS.gene034150:CDS |
| TCGCGGTCGGTGCAGAACTA+AGG | 0.413611 | 4.4:-90062980 | None:intergenic |
| TGCCTTTGCTTTAATCTCCT+CGG | 0.413901 | 4.4:-90064143 | None:intergenic |
| AATTGATTAAGAAAGTTTGT+AGG | 0.415829 | 4.4:+90062856 | MS.gene034150:CDS |
| GCGGGGAGCATGAGAAGAAT+GGG | 0.418503 | 4.4:+90063270 | MS.gene034150:CDS |
| TTGATTTCGGTTGCGAGTGC+TGG | 0.420907 | 4.4:-90062222 | None:intergenic |
| AATCGCATTCTTCAGCTCAC+TGG | 0.421276 | 4.4:+90064621 | MS.gene034150:CDS |
| AGGGATCTCTGTCTTCTATT+GGG | 0.424819 | 4.4:+90063789 | MS.gene034150:CDS |
| AGGAATAATAAGGGAGAGAA+AGG | 0.425300 | 4.4:+90062876 | MS.gene034150:CDS |
| AGAAATTTCTCAACAATCTC+AGG | 0.429922 | 4.4:-90062690 | None:intergenic |
| TCTATCAGATTCGGGCTGCT+AGG | 0.430384 | 4.4:+90063498 | MS.gene034150:CDS |
| CATTTGTTGATGGATTTCTT+GGG | 0.431544 | 4.4:+90063368 | MS.gene034150:CDS |
| GAGAACTTTACCGCGAGAAT+CGG | 0.432166 | 4.4:-90062427 | None:intergenic |
| TCTCTTGTTCAGCTCTGCAT+TGG | 0.438702 | 4.4:+90067022 | MS.gene034150:intron |
| GAGGAATGGTTTCGCCGTTA+AGG | 0.439775 | 4.4:-90062311 | None:intergenic |
| TCTGGAGAGTTTCCTTGGTC+CGG | 0.441384 | 4.4:-90064722 | None:intergenic |
| AGCGGGGAGCATGAGAAGAA+TGG | 0.445155 | 4.4:+90063269 | MS.gene034150:CDS |
| TGATAGAAACACGCAGCTTA+GGG | 0.445334 | 4.4:-90063454 | None:intergenic |
| TAAATTCTGGAGAGTTTCCT+TGG | 0.445694 | 4.4:-90064727 | None:intergenic |
| TCATGAGAATCATTATCAAT+TGG | 0.450088 | 4.4:-90064001 | None:intergenic |
| TATGGTTATGGATGTCCTTA+GGG | 0.454595 | 4.4:+90063124 | MS.gene034150:CDS |
| CTTTAATCTCCTCGGTCTCA+CGG | 0.455907 | 4.4:-90064135 | None:intergenic |
| AAGGAACTCACGGTGGAGTC+AGG | 0.457955 | 4.4:-90066720 | None:intergenic |
| CAAGACTCAGAGCAATTCCC+TGG | 0.458458 | 4.4:-90067178 | None:intergenic |
| TGACATTCATATTGATATCA+TGG | 0.459711 | 4.4:+90064941 | MS.gene034150:CDS |
| GACATCAAAGGCTGTGCAGC+AGG | 0.460529 | 4.4:+90063658 | MS.gene034150:CDS |
| GTCCCATCGGCAAGAATCGC+AGG | 0.461816 | 4.4:-90063710 | None:intergenic |
| GACAAAGCTTATCTTAAGGT+TGG | 0.462489 | 4.4:+90063874 | MS.gene034150:CDS |
| GTCATAGGTTGCTGTAAATA+CGG | 0.462568 | 4.4:+90066639 | MS.gene034150:intron |
| ATGAGAAGAATGGGGAGTAT+AGG | 0.463060 | 4.4:+90063279 | MS.gene034150:CDS |
| CGCGGTCGGTGCAGAACTAA+GGG | 0.465199 | 4.4:-90062979 | None:intergenic |
| TACACCGAAGAATATTGATC+AGG | 0.471600 | 4.4:+90063208 | MS.gene034150:CDS |
| CAGTCTCAAGAGCAGCACTC+TGG | 0.477594 | 4.4:-90063742 | None:intergenic |
| AGCAAGATGCTTCGAGTAAG+AGG | 0.478958 | 4.4:+90062721 | MS.gene034150:CDS |
| TTGATAATGATTCTCATGAC+AGG | 0.479100 | 4.4:+90064005 | MS.gene034150:CDS |
| CACTGACAAAGCTTATCTTA+AGG | 0.479698 | 4.4:+90063870 | MS.gene034150:CDS |
| CTATCAGATTCGGGCTGCTA+GGG | 0.480565 | 4.4:+90063499 | MS.gene034150:CDS |
| CTCAGCCCACATAGTTCTAA+AGG | 0.487112 | 4.4:-90064997 | None:intergenic |
| ATCGCATTCTTCAGCTCACT+GGG | 0.488030 | 4.4:+90064622 | MS.gene034150:CDS |
| AGAATCAAGCAAACAGATCA+AGG | 0.488212 | 4.4:+90064818 | MS.gene034150:CDS |
| CTCATCGTTCACTTCGACAA+AGG | 0.489294 | 4.4:+90062195 | MS.gene034150:CDS |
| GTCACCGCCTACCCTTGTGC+AGG | 0.489447 | 4.4:+90063769 | MS.gene034150:CDS |
| GTGATGAGATAAGGAAGATA+TGG | 0.490653 | 4.4:+90064062 | MS.gene034150:CDS |
| TTGTTCAGCTCTGCATTGGA+AGG | 0.494510 | 4.4:+90067026 | MS.gene034150:intron |
| AGGTTGTTAAGACGCAGAGC+GGG | 0.495077 | 4.4:+90063252 | MS.gene034150:CDS |
| CTTCACAAAGCTCTGCCTGC+AGG | 0.495433 | 4.4:-90064092 | None:intergenic |
| TAAAATCACTTTGAAGCAGA+AGG | 0.501025 | 4.4:+90067205 | MS.gene034150:CDS |
| GCTTATCTTAAGGTTGGAAG+AGG | 0.501167 | 4.4:+90063880 | MS.gene034150:CDS |
| TAAAAGTCGATGAGGTCATC+AGG | 0.502253 | 4.4:-90064184 | None:intergenic |
| GCAACTATTAAGCAGTGTCT+TGG | 0.506903 | 4.4:+90063590 | MS.gene034150:CDS |
| TCCTGCATCTTGTGCTGATG+TGG | 0.507317 | 4.4:+90064974 | MS.gene034150:CDS |
| GGTTGTTATGATGCTTAAGA+AGG | 0.507964 | 4.4:+90063229 | MS.gene034150:CDS |
| ACAACCTGATCAATATTCTT+CGG | 0.518597 | 4.4:-90063212 | None:intergenic |
| TGAAGCTTATTGTGCTTGAT+CGG | 0.519817 | 4.4:+90063060 | MS.gene034150:CDS |
| TCCTCAGAGATGGTGTAAAA+GGG | 0.521024 | 4.4:-90063620 | None:intergenic |
| AGTGGAAGAAACCTTGATGT+TGG | 0.521670 | 4.4:-90064841 | None:intergenic |
| TAGACTTGATAATGTGGCCC+AGG | 0.522945 | 4.4:-90066684 | None:intergenic |
| GCCACATCAGCACAAGATGC+AGG | 0.523769 | 4.4:-90064975 | None:intergenic |
| TTGATGTTACTGTCATCAAC+CGG | 0.524042 | 4.4:+90064703 | MS.gene034150:CDS |
| AGGCCTGCGATTCTTGCCGA+TGG | 0.526847 | 4.4:+90063707 | MS.gene034150:CDS |
| GACAGATTAGGATCATTTCA+GGG | 0.527691 | 4.4:-90062449 | None:intergenic |
| TGTTATGATGCTTAAGAAGG+AGG | 0.528121 | 4.4:+90063232 | MS.gene034150:CDS |
| TGTTTGGAGTTAGCAACTAT+GGG | 0.530203 | 4.4:+90064750 | MS.gene034150:CDS |
| AGTCTCAAGAGCAGCACTCT+GGG | 0.531103 | 4.4:-90063741 | None:intergenic |
| ACCCTCTCCATCCTCAGAGA+TGG | 0.532455 | 4.4:-90063630 | None:intergenic |
| TACAAATGTTGCGTCTGCTA+TGG | 0.534308 | 4.4:+90063394 | MS.gene034150:CDS |
| TCTCTTTCGGAGGTTGAGAG+TGG | 0.534403 | 4.4:+90063563 | MS.gene034150:CDS |
| CACAAGGGTAGGCGGTGACA+TGG | 0.536144 | 4.4:-90063765 | None:intergenic |
| TACGGTATTGCAAGATGAGA+GGG | 0.541044 | 4.4:+90066657 | MS.gene034150:CDS |
| GACGATCTTAAACGTGCCAC+TGG | 0.541667 | 4.4:+90064561 | MS.gene034150:CDS |
| GAGGTCATCAGGCTGTGCAT+TGG | 0.542020 | 4.4:-90064173 | None:intergenic |
| CGTCGCAAGTGAGGACGTAA+CGG | 0.542360 | 4.4:-90062353 | None:intergenic |
| ATGTGGCCTTTAGAACTATG+TGG | 0.543399 | 4.4:+90064991 | MS.gene034150:CDS |
| TCTGTTTATAAGCTTCCTCA+AGG | 0.549635 | 4.4:+90062645 | MS.gene034150:CDS |
| ACATATGCTTCAGCATAGAC+AGG | 0.550275 | 4.4:-90064654 | None:intergenic |
| GGGTTTGTTCTTGTGCTCTG+TGG | 0.551774 | 4.4:+90063519 | MS.gene034150:CDS |
| ACAGATCAAGGCCAACATCA+AGG | 0.551932 | 4.4:+90064830 | MS.gene034150:CDS |
| TGAGCTCGAAGATGAGGTGC+AGG | 0.552537 | 4.4:+90064539 | MS.gene034150:CDS |
| TGAGATAAGGAAGATATGGC+TGG | 0.554553 | 4.4:+90064066 | MS.gene034150:CDS |
| TGTTTATAAGCTTCCTCAAG+GGG | 0.557926 | 4.4:+90062647 | MS.gene034150:CDS |
| ACACCGCGAATAAATTCGTT+CGG | 0.559084 | 4.4:-90062498 | None:intergenic |
| CTCAAAAGTTGAAGTTAACA+AGG | 0.559317 | 4.4:+90063910 | MS.gene034150:CDS |
| GTATAGGCAGATGTTGGTGC+AGG | 0.560283 | 4.4:+90063295 | MS.gene034150:CDS |
| GGCCTGCGATTCTTGCCGAT+GGG | 0.560801 | 4.4:+90063708 | MS.gene034150:CDS |
| ATGGTCTCAATGCTGCAGCT+TGG | 0.561190 | 4.4:+90063956 | MS.gene034150:CDS |
| AGATATGGCTGGAATCCTGC+AGG | 0.561257 | 4.4:+90064077 | MS.gene034150:CDS |
| TCACCGAACGAATTTATTCG+CGG | 0.565447 | 4.4:+90062495 | MS.gene034150:CDS |
| ACAGCGTTTCGTCTCACGAA+AGG | 0.565951 | 4.4:-90062609 | None:intergenic |
| CTGTTTATAAGCTTCCTCAA+GGG | 0.566708 | 4.4:+90062646 | MS.gene034150:CDS |
| ACAACAGTACTCGCCACCTC+CGG | 0.567962 | 4.4:-90063344 | None:intergenic |
| TGATTTCGAGGTAAAGAAGA+AGG | 0.570684 | 4.4:-90062395 | None:intergenic |
| ATTGATAGGATCATTGATTG+GGG | 0.572572 | 4.4:+90062807 | MS.gene034150:CDS |
| TTATCACTTGAAGAGCAGAA+AGG | 0.572845 | 4.4:+90064204 | MS.gene034150:CDS |
| TGAGTTTGAGTGGGAAAACA+AGG | 0.573213 | 4.4:+90065016 | MS.gene034150:CDS |
| GGAATAATAAGGGAGAGAAA+GGG | 0.575016 | 4.4:+90062877 | MS.gene034150:CDS |
| TTCGGGTGATTTCTTCCTTG+GGG | 0.575242 | 4.4:+90063832 | MS.gene034150:CDS |
| GAATCATTATCAATTGGATG+TGG | 0.584531 | 4.4:-90063995 | None:intergenic |
| GTATTGTTTGTCTCTTTCGG+AGG | 0.585959 | 4.4:+90063553 | MS.gene034150:CDS |
| CACCATCTCTGAGGATGGAG+AGG | 0.586391 | 4.4:+90063628 | MS.gene034150:CDS |
| TATTTGTAGACTTGATAATG+TGG | 0.587171 | 4.4:-90066690 | None:intergenic |
| CAAGATGAGAGGGAGTTCCT+GGG | 0.587875 | 4.4:+90066667 | MS.gene034150:CDS |
| GTAATACTGGTGATGAGATA+AGG | 0.591054 | 4.4:+90064053 | MS.gene034150:CDS |
| CCTCATCTTCGAGCTCAAGT+TGG | 0.591377 | 4.4:-90064533 | None:intergenic |
| CAGAATAAGAAGTAAAACCC+AGG | 0.591954 | 4.4:+90067160 | MS.gene034150:CDS |
| TCAAGCAACTGCTCCCCTTG+AGG | 0.592174 | 4.4:-90062660 | None:intergenic |
| AGCAGCACTCTGGGTAGCAT+AGG | 0.593369 | 4.4:-90063732 | None:intergenic |
| TGATAGGATCATTGATTGGG+GGG | 0.593801 | 4.4:+90062809 | MS.gene034150:CDS |
| GATAAAATCGAAGGAATCAA+CGG | 0.600291 | 4.4:-90062567 | None:intergenic |
| AGTGAGGACGTAACGGATGA+CGG | 0.601311 | 4.4:-90062346 | None:intergenic |
| GCAGCCGCTTTAATCGCGGT+CGG | 0.602852 | 4.4:-90062993 | None:intergenic |
| GCTGTTGTTTATGAATGTGC+TGG | 0.603920 | 4.4:+90062945 | MS.gene034150:CDS |
| TGCACCGACCGCGATTAAAG+CGG | 0.605018 | 4.4:+90062989 | MS.gene034150:CDS |
| TGGGGAGTATAGGCAGATGT+TGG | 0.605111 | 4.4:+90063289 | MS.gene034150:CDS |
| CGGTGTGATCGTCGCAAGTG+AGG | 0.605395 | 4.4:-90062362 | None:intergenic |
| AAGACAGAGATCCCTGCACA+AGG | 0.605670 | 4.4:-90063781 | None:intergenic |
| GACCGAGGAGATTAAAGCAA+AGG | 0.607890 | 4.4:+90064141 | MS.gene034150:CDS |
| TCCAGATTCGATAAAATCGA+AGG | 0.607979 | 4.4:-90062576 | None:intergenic |
| TGTGGCCTTTAGAACTATGT+GGG | 0.608107 | 4.4:+90064992 | MS.gene034150:CDS |
| TACACAGCAATCTAATGCAA+AGG | 0.609288 | 4.4:-90064033 | None:intergenic |
| AGACAGAGATCCCTGCACAA+GGG | 0.610395 | 4.4:-90063780 | None:intergenic |
| GAATATAACTCCAGTTTCAG+TGG | 0.612897 | 4.4:-90064859 | None:intergenic |
| ATAACCGCTCAATTTACCAT+CGG | 0.613015 | 4.4:-90067135 | None:intergenic |
| TCACCGCCTACCCTTGTGCA+GGG | 0.613107 | 4.4:+90063770 | MS.gene034150:CDS |
| AGAGATCCCTGCACAAGGGT+AGG | 0.614667 | 4.4:-90063776 | None:intergenic |
| CCAACTTGAGCTCGAAGATG+AGG | 0.614861 | 4.4:+90064533 | MS.gene034150:CDS |
| AGAATAAGAAGTAAAACCCA+GGG | 0.615034 | 4.4:+90067161 | MS.gene034150:CDS |
| AAAATCACTTTGAAGCAGAA+GGG | 0.616042 | 4.4:+90067206 | MS.gene034150:CDS |
| TAGGAGTCGAAAGTGCCCTA+AGG | 0.616121 | 4.4:-90063139 | None:intergenic |
| TAAGCAGCGCCGTGAGACCG+AGG | 0.616463 | 4.4:+90064126 | MS.gene034150:CDS |
| TCTGCATTGGAAGGTGAGTG+TGG | 0.618873 | 4.4:+90067035 | MS.gene034150:CDS |
| AAGACTCAGAGCAATTCCCT+GGG | 0.620234 | 4.4:-90067177 | None:intergenic |
| ATACGGTATTGCAAGATGAG+AGG | 0.623355 | 4.4:+90066656 | MS.gene034150:CDS |
| TCGGCTTAACGAGCTTAAGA+GGG | 0.624554 | 4.4:+90063079 | MS.gene034150:CDS |
| CTATGTGGGCTGAGTTTGAG+TGG | 0.625334 | 4.4:+90065006 | MS.gene034150:CDS |
| TGCGTGTTTCTATCATCACT+AGG | 0.626366 | 4.4:+90063462 | MS.gene034150:CDS |
| CTGGGTAGCATAGGTCCCAT+CGG | 0.628553 | 4.4:-90063723 | None:intergenic |
| TGTTGCGTCTGCTATGGATG+TGG | 0.631879 | 4.4:+90063400 | MS.gene034150:CDS |
| GGTTGTTAAGACGCAGAGCG+GGG | 0.634964 | 4.4:+90063253 | MS.gene034150:CDS |
| ATCCTTTGTAAACTCTCCAG+TGG | 0.635004 | 4.4:-90064577 | None:intergenic |
| GGGAATTGCTCTGAGTCTTG+GGG | 0.635580 | 4.4:+90067181 | MS.gene034150:CDS |
| ATTCGCAGCCGCTTTAATCG+CGG | 0.638162 | 4.4:-90062997 | None:intergenic |
| ATGACGGTGATGAAGAGTTG+AGG | 0.642418 | 4.4:-90062330 | None:intergenic |
| GGTTGATGACAGTAACATCA+AGG | 0.643491 | 4.4:-90064701 | None:intergenic |
| GAAATCAAAGAATCTCTCGA+AGG | 0.643937 | 4.4:+90062237 | MS.gene034150:CDS |
| ACCATCTCTGAGGATGGAGA+GGG | 0.647823 | 4.4:+90063629 | MS.gene034150:CDS |
| AGAGGGTCAGGAGACATCAA+AGG | 0.653712 | 4.4:+90063646 | MS.gene034150:CDS |
| TTGTGCTATTAAGTTTCCGG+AGG | 0.654288 | 4.4:+90063328 | MS.gene034150:CDS |
| GGTGATGAAGAGTTGAGGAA+TGG | 0.658642 | 4.4:-90062325 | None:intergenic |
| AGCATTGAGAAGCAATCCGA+TGG | 0.659389 | 4.4:+90067119 | MS.gene034150:CDS |
| TACTGTCATCAACCGGACCA+AGG | 0.661558 | 4.4:+90064710 | MS.gene034150:CDS |
| CGGGGAGCATGAGAAGAATG+GGG | 0.661763 | 4.4:+90063271 | MS.gene034150:CDS |
| CGACCACTGTGTCTTCTAGG+AGG | 0.662950 | 4.4:+90063687 | MS.gene034150:CDS |
| GATCCCTGCACAAGGGTAGG+CGG | 0.664720 | 4.4:-90063773 | None:intergenic |
| CATTGAGACCATGATCAACA+AGG | 0.665953 | 4.4:-90063945 | None:intergenic |
| GCGTCCACAAAACTACACTC+TGG | 0.667477 | 4.4:+90064791 | MS.gene034150:CDS |
| TGATAATGATTCTCATGACA+GGG | 0.668331 | 4.4:+90064006 | MS.gene034150:CDS |
| TACATGCGACAACTGCCCCA+AGG | 0.668408 | 4.4:-90063847 | None:intergenic |
| CAATCCGATGGTAAATTGAG+CGG | 0.668476 | 4.4:+90067131 | MS.gene034150:CDS |
| GAGGTTGTTAAGACGCAGAG+CGG | 0.671714 | 4.4:+90063251 | MS.gene034150:CDS |
| TCAAGTGATAAAAGTCGATG+AGG | 0.671720 | 4.4:-90064192 | None:intergenic |
| TATGTGGGCTGAGTTTGAGT+GGG | 0.690862 | 4.4:+90065007 | MS.gene034150:CDS |
| TTGATAGGATCATTGATTGG+GGG | 0.691639 | 4.4:+90062808 | MS.gene034150:CDS |
| ACCGATAAAACCGATTCTCG+CGG | 0.697764 | 4.4:+90062417 | MS.gene034150:CDS |
| CTTTGTCGAAGTGAACGATG+AGG | 0.700062 | 4.4:-90062194 | None:intergenic |
| GAGCTTTGTGAAGATGCTCG+CGG | 0.718610 | 4.4:+90064102 | MS.gene034150:CDS |
| TGCCACTGGAGAGTTTACAA+AGG | 0.721810 | 4.4:+90064575 | MS.gene034150:CDS |
| AGCACATTCATAAACAACAG+CGG | 0.738106 | 4.4:-90062943 | None:intergenic |
| AGGCCTCCTAGAAGACACAG+TGG | 0.786866 | 4.4:-90063690 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTAAAATGGAAAAAT+GGG | - | chr4.4:90065146-90065165 | None:intergenic | 10.0% |
| !! | ATAAAAGTTGAAAAAGATTA+TGG | + | chr4.4:90065086-90065105 | MS.gene034150:intron | 15.0% |
| !! | TAGGATAAATCATATATATA+GGG | - | chr4.4:90065665-90065684 | None:intergenic | 15.0% |
| !! | TCCTAAATAAAACAAAAAAT+AGG | + | chr4.4:90066177-90066196 | MS.gene034150:intron | 15.0% |
| !! | TTAGGATAAATCATATATAT+AGG | - | chr4.4:90065666-90065685 | None:intergenic | 15.0% |
| !!! | ATAATTTTATGTTGTTAATG+CGG | - | chr4.4:90066083-90066102 | None:intergenic | 15.0% |
| !!! | ATTATTTTCTAAGACAAATT+TGG | + | chr4.4:90066098-90066117 | MS.gene034150:intron | 15.0% |
| !!! | ATTTTTAAAATGGAAAAATG+GGG | - | chr4.4:90065145-90065164 | None:intergenic | 15.0% |
| !!! | CAATTTTTAAAATGGAAAAA+TGG | - | chr4.4:90065147-90065166 | None:intergenic | 15.0% |
| !!! | GTATTAATAATTTTTTTTCG+TGG | + | chr4.4:90065376-90065395 | MS.gene034150:intron | 15.0% |
| !!! | TCCTATTTTTTGTTTTATTT+AGG | - | chr4.4:90066181-90066200 | None:intergenic | 15.0% |
| !!! | TTATTTTCTAAGACAAATTT+GGG | + | chr4.4:90066099-90066118 | MS.gene034150:intron | 15.0% |
| !!! | TTTTCATGCAATTTTTAAAA+TGG | - | chr4.4:90065155-90065174 | None:intergenic | 15.0% |
| !! | AAAATATAACAAATGAGAGA+AGG | - | chr4.4:90065056-90065075 | None:intergenic | 20.0% |
| !! | AAAGTTTGTAGGAATAATAA+GGG | + | chr4.4:90062867-90062886 | MS.gene034150:CDS | 20.0% |
| !! | AATTGATTAAGAAAGTTTGT+AGG | + | chr4.4:90062856-90062875 | MS.gene034150:CDS | 20.0% |
| !! | TAAAAAGAAAAACAGAATTC+TGG | - | chr4.4:90066802-90066821 | None:intergenic | 20.0% |
| !!! | ATCTTTTTACGAATATTGAT+AGG | + | chr4.4:90062793-90062812 | MS.gene034150:CDS | 20.0% |
| !!! | CTCTAATTTTTTTTGTATGA+AGG | + | chr4.4:90066288-90066307 | MS.gene034150:intron | 20.0% |
| !!! | GAATTCTGTTTTTCTTTTTA+AGG | + | chr4.4:90066802-90066821 | MS.gene034150:intron | 20.0% |
| !!! | TAACATCAATTTTATGTCAT+AGG | + | chr4.4:90066624-90066643 | MS.gene034150:intron | 20.0% |
| !!! | TATTTTCTAAGACAAATTTG+GGG | + | chr4.4:90066100-90066119 | MS.gene034150:intron | 20.0% |
| ! | ACCAAATTAAACAAATTGCA+TGG | - | chr4.4:90066944-90066963 | None:intergenic | 25.0% |
| ! | ACCAAATTAAACAAATTGCT+TGG | - | chr4.4:90066994-90067013 | None:intergenic | 25.0% |
| ! | ACTATACCATTCTTAGAAAA+AGG | - | chr4.4:90064254-90064273 | None:intergenic | 25.0% |
| ! | ATAAGGTTTACGCAAATTAA+AGG | - | chr4.4:90066742-90066761 | None:intergenic | 25.0% |
| ! | ATATTGATAGGATCATTGAT+TGG | + | chr4.4:90062805-90062824 | MS.gene034150:CDS | 25.0% |
| ! | CAGCTTATACATATACAATT+AGG | - | chr4.4:90065533-90065552 | None:intergenic | 25.0% |
| ! | CCAAATTAAACAAATTGCAT+GGG | - | chr4.4:90066943-90066962 | None:intergenic | 25.0% |
| ! | CCAAATTAAACAAATTGCTT+GGG | - | chr4.4:90066993-90067012 | None:intergenic | 25.0% |
| ! | GAAAGTTTGTAGGAATAATA+AGG | + | chr4.4:90062866-90062885 | MS.gene034150:CDS | 25.0% |
| ! | TACTTTAGATTCATGATTCA+TGG | + | chr4.4:90065187-90065206 | MS.gene034150:intron | 25.0% |
| ! | TATAAGCTGTAAGAATTTCT+AGG | + | chr4.4:90065544-90065563 | MS.gene034150:intron | 25.0% |
| ! | TCATATTGAACTATTGAAGT+TGG | + | chr4.4:90065346-90065365 | MS.gene034150:intron | 25.0% |
| ! | TCATGAGAATCATTATCAAT+TGG | - | chr4.4:90064004-90064023 | None:intergenic | 25.0% |
| ! | TGACATTCATATTGATATCA+TGG | + | chr4.4:90064941-90064960 | MS.gene034150:CDS | 25.0% |
| ! | TGTAATAACTACATGAATGA+TGG | + | chr4.4:90066226-90066245 | MS.gene034150:intron | 25.0% |
| ! | TTCCTTCTAATATCATGATT+AGG | - | chr4.4:90063161-90063180 | None:intergenic | 25.0% |
| !! | AATATAACTTTAAGAGCACA+GGG | - | chr4.4:90065238-90065257 | None:intergenic | 25.0% |
| !! | ATCATCTTACAATTTTACCA+AGG | - | chr4.4:90065466-90065485 | None:intergenic | 25.0% |
| !! | TATTGATAGGATCATTGATT+GGG | + | chr4.4:90062806-90062825 | MS.gene034150:CDS | 25.0% |
| !! | TGTTGAGAAATTTCTTGTTT+CGG | + | chr4.4:90062698-90062717 | MS.gene034150:CDS | 25.0% |
| !!! | TATTTGTAGACTTGATAATG+TGG | - | chr4.4:90066693-90066712 | None:intergenic | 25.0% |
| AAACTTCATGTGAACTCATT+AGG | - | chr4.4:90066259-90066278 | None:intergenic | 30.0% | |
| AACTCTCCAGAATTTATGTT+TGG | + | chr4.4:90064734-90064753 | MS.gene034150:CDS | 30.0% | |
| AACTTCATGTGAACTCATTA+GGG | - | chr4.4:90066258-90066277 | None:intergenic | 30.0% | |
| AAGAGACGATAACAATAATG+AGG | + | chr4.4:90065684-90065703 | MS.gene034150:intron | 30.0% | |
| AATGTATGTAGTTGTAGTAC+AGG | + | chr4.4:90066497-90066516 | MS.gene034150:intron | 30.0% | |
| ACAACCTGATCAATATTCTT+CGG | - | chr4.4:90063215-90063234 | None:intergenic | 30.0% | |
| ACTGAAACTGGAGTTATATT+CGG | + | chr4.4:90064861-90064880 | MS.gene034150:CDS | 30.0% | |
| ACTGTTTCAATGACTCAATT+TGG | + | chr4.4:90066337-90066356 | MS.gene034150:intron | 30.0% | |
| AGAAATTTCTCAACAATCTC+AGG | - | chr4.4:90062693-90062712 | None:intergenic | 30.0% | |
| AGAATAAGAAGTAAAACCCA+GGG | + | chr4.4:90067161-90067180 | MS.gene034150:CDS | 30.0% | |
| ATACAATTAGGCTACTACTA+GGG | - | chr4.4:90065521-90065540 | None:intergenic | 30.0% | |
| ATATAACAAATGAGAGAAGG+AGG | - | chr4.4:90065053-90065072 | None:intergenic | 30.0% | |
| ATTAGATTGCTGTGTAATAC+TGG | + | chr4.4:90064040-90064059 | MS.gene034150:CDS | 30.0% | |
| CATGCAAAACAAAAACTTCA+AGG | - | chr4.4:90064299-90064318 | None:intergenic | 30.0% | |
| CATTATTGTTATCGTCTCTT+AGG | - | chr4.4:90065684-90065703 | None:intergenic | 30.0% | |
| CTAACTCCAAACATAAATTC+TGG | - | chr4.4:90064743-90064762 | None:intergenic | 30.0% | |
| CTCAAAAGTTGAAGTTAACA+AGG | + | chr4.4:90063910-90063929 | MS.gene034150:CDS | 30.0% | |
| CTCCTAATCATGATATTAGA+AGG | + | chr4.4:90063156-90063175 | MS.gene034150:CDS | 30.0% | |
| GAATCATTATCAATTGGATG+TGG | - | chr4.4:90063998-90064017 | None:intergenic | 30.0% | |
| GATAAAATCGAAGGAATCAA+CGG | - | chr4.4:90062570-90062589 | None:intergenic | 30.0% | |
| GTATGAAGGAAGCTATAAAT+AGG | + | chr4.4:90066302-90066321 | MS.gene034150:intron | 30.0% | |
| TATACAATTAGGCTACTACT+AGG | - | chr4.4:90065522-90065541 | None:intergenic | 30.0% | |
| TCATGGTAATCTCTATTACT+GGG | + | chr4.4:90065204-90065223 | MS.gene034150:intron | 30.0% | |
| TGGATACTTTCTATCAGATT+CGG | + | chr4.4:90063489-90063508 | MS.gene034150:CDS | 30.0% | |
| TTCATGGTAATCTCTATTAC+TGG | + | chr4.4:90065203-90065222 | MS.gene034150:intron | 30.0% | |
| TTGCATGAAAAACAACTTCT+AGG | + | chr4.4:90065164-90065183 | MS.gene034150:intron | 30.0% | |
| ! | AAGAAGAAGGAGTTTTTGAA+CGG | - | chr4.4:90062385-90062404 | None:intergenic | 30.0% |
| ! | AAGTTTAGTGTTTTGTCAGT+TGG | + | chr4.4:90064405-90064424 | MS.gene034150:intron | 30.0% |
| ! | AGCTGTGATTCATTCATTTT+TGG | - | chr4.4:90066430-90066449 | None:intergenic | 30.0% |
| ! | AGTTTAGTGTTTTGTCAGTT+GGG | + | chr4.4:90064406-90064425 | MS.gene034150:intron | 30.0% |
| ! | ATATAACTTTAAGAGCACAG+GGG | - | chr4.4:90065237-90065256 | None:intergenic | 30.0% |
| ! | ATCTTACAATTTTACCAAGG+TGG | - | chr4.4:90065463-90065482 | None:intergenic | 30.0% |
| ! | ATTGATAGGATCATTGATTG+GGG | + | chr4.4:90062807-90062826 | MS.gene034150:CDS | 30.0% |
| ! | CAATATAACTTTAAGAGCAC+AGG | - | chr4.4:90065239-90065258 | None:intergenic | 30.0% |
| ! | CCCAAGCAATTTGTTTAATT+TGG | + | chr4.4:90066990-90067009 | MS.gene034150:intron | 30.0% |
| ! | CCCATGCAATTTGTTTAATT+TGG | + | chr4.4:90066940-90066959 | MS.gene034150:intron | 30.0% |
| ! | CTTCGATGATGGTATATTAA+TGG | + | chr4.4:90065298-90065317 | MS.gene034150:intron | 30.0% |
| ! | CTTGTTAACTTCAACTTTTG+AGG | - | chr4.4:90063912-90063931 | None:intergenic | 30.0% |
| ! | GATGATGGTATATTAATGGT+TGG | + | chr4.4:90065302-90065321 | MS.gene034150:intron | 30.0% |
| ! | GATTATGGTTGATATGGTTA+TGG | + | chr4.4:90063112-90063131 | MS.gene034150:CDS | 30.0% |
| ! | TACTTGTGCTATTAAGTTTC+CGG | + | chr4.4:90063325-90063344 | MS.gene034150:CDS | 30.0% |
| ! | TGAGTATTGTTTGTCTCTTT+CGG | + | chr4.4:90063550-90063569 | MS.gene034150:CDS | 30.0% |
| ! | TGATAATGATTCTCATGACA+GGG | + | chr4.4:90064006-90064025 | MS.gene034150:CDS | 30.0% |
| ! | TTCGAGAGATTCTTTGATTT+CGG | - | chr4.4:90062238-90062257 | None:intergenic | 30.0% |
| ! | TTTATACACTGATGCTTTTC+TGG | + | chr4.4:90065965-90065984 | MS.gene034150:intron | 30.0% |
| !! | AAAATCACTTTGAAGCAGAA+GGG | + | chr4.4:90067206-90067225 | MS.gene034150:CDS | 30.0% |
| !! | CATTTGTTGATGGATTTCTT+GGG | + | chr4.4:90063368-90063387 | MS.gene034150:CDS | 30.0% |
| !! | TAAAATCACTTTGAAGCAGA+AGG | + | chr4.4:90067205-90067224 | MS.gene034150:CDS | 30.0% |
| !! | TACGAAGATTTTGACAGATT+AGG | - | chr4.4:90062464-90062483 | None:intergenic | 30.0% |
| !! | TTGATAATGATTCTCATGAC+AGG | + | chr4.4:90064005-90064024 | MS.gene034150:CDS | 30.0% |
| !! | TTTGCTCCTTTTTCTAAGAA+TGG | + | chr4.4:90064245-90064264 | MS.gene034150:intron | 30.0% |
| !!! | AGATTCAGCATGTTACTTTT+TGG | - | chr4.4:90065595-90065614 | None:intergenic | 30.0% |
| !!! | GATTCAGCATGTTACTTTTT+GGG | - | chr4.4:90065594-90065613 | None:intergenic | 30.0% |
| !!! | TGTATGCAAAGAGTGTTTTT+GGG | + | chr4.4:90067075-90067094 | MS.gene034150:CDS | 30.0% |
| AATTCTGGTAGTAGATAGTC+AGG | - | chr4.4:90066787-90066806 | None:intergenic | 35.0% | |
| ACAATCATGCTTCTAGATGA+TGG | - | chr4.4:90066539-90066558 | None:intergenic | 35.0% | |
| ACGCAAATTAAAGGAACTCA+CGG | - | chr4.4:90066733-90066752 | None:intergenic | 35.0% | |
| ACGCAACAATAACAGTCATA+AGG | - | chr4.4:90066759-90066778 | None:intergenic | 35.0% | |
| AGAATCAAGCAAACAGATCA+AGG | + | chr4.4:90064818-90064837 | MS.gene034150:CDS | 35.0% | |
| AGCACATTCATAAACAACAG+CGG | - | chr4.4:90062946-90062965 | None:intergenic | 35.0% | |
| AGGAATAATAAGGGAGAGAA+AGG | + | chr4.4:90062876-90062895 | MS.gene034150:CDS | 35.0% | |
| ATAACCGCTCAATTTACCAT+CGG | - | chr4.4:90067138-90067157 | None:intergenic | 35.0% | |
| ATATGGTTATGGATGTCCTT+AGG | + | chr4.4:90063123-90063142 | MS.gene034150:CDS | 35.0% | |
| ATGAATCCCACAATCAGTTA+TGG | - | chr4.4:90066872-90066891 | None:intergenic | 35.0% | |
| ATGTAGTTGTAGTACAGGTA+TGG | + | chr4.4:90066502-90066521 | MS.gene034150:intron | 35.0% | |
| CACTGACAAAGCTTATCTTA+AGG | + | chr4.4:90063870-90063889 | MS.gene034150:CDS | 35.0% | |
| CAGAATAAGAAGTAAAACCC+AGG | + | chr4.4:90067160-90067179 | MS.gene034150:CDS | 35.0% | |
| CTGTTTATAAGCTTCCTCAA+GGG | + | chr4.4:90062646-90062665 | MS.gene034150:CDS | 35.0% | |
| CTTGAGATCTCTGATTCTTT+CGG | + | chr4.4:90063814-90063833 | MS.gene034150:CDS | 35.0% | |
| GAAATCAAAGAATCTCTCGA+AGG | + | chr4.4:90062237-90062256 | MS.gene034150:CDS | 35.0% | |
| GAATATAACTCCAGTTTCAG+TGG | - | chr4.4:90064862-90064881 | None:intergenic | 35.0% | |
| GACAAAGCTTATCTTAAGGT+TGG | + | chr4.4:90063874-90063893 | MS.gene034150:CDS | 35.0% | |
| GACAGATTAGGATCATTTCA+GGG | - | chr4.4:90062452-90062471 | None:intergenic | 35.0% | |
| GAGTGATATGCTGATAGATA+TGG | + | chr4.4:90065925-90065944 | MS.gene034150:intron | 35.0% | |
| GCAATTATGCTTCTCCTTAA+CGG | + | chr4.4:90062297-90062316 | MS.gene034150:CDS | 35.0% | |
| GGAATAATAAGGGAGAGAAA+GGG | + | chr4.4:90062877-90062896 | MS.gene034150:CDS | 35.0% | |
| GGATACTTTCTATCAGATTC+GGG | + | chr4.4:90063490-90063509 | MS.gene034150:CDS | 35.0% | |
| GGATCGAAATAAGCAGTAAA+AGG | - | chr4.4:90065117-90065136 | None:intergenic | 35.0% | |
| GGTTGTTATGATGCTTAAGA+AGG | + | chr4.4:90063229-90063248 | MS.gene034150:CDS | 35.0% | |
| GTCATAGGTTGCTGTAAATA+CGG | + | chr4.4:90066639-90066658 | MS.gene034150:intron | 35.0% | |
| GTGATGAGATAAGGAAGATA+TGG | + | chr4.4:90064062-90064081 | MS.gene034150:CDS | 35.0% | |
| TAAGTGTACTGAGCACATAA+CGG | - | chr4.4:90064459-90064478 | None:intergenic | 35.0% | |
| TACAATTAGGCTACTACTAG+GGG | - | chr4.4:90065520-90065539 | None:intergenic | 35.0% | |
| TACACAGCAATCTAATGCAA+AGG | - | chr4.4:90064036-90064055 | None:intergenic | 35.0% | |
| TACACCGAAGAATATTGATC+AGG | + | chr4.4:90063208-90063227 | MS.gene034150:CDS | 35.0% | |
| TACCACAACTCGACAAATAT+AGG | - | chr4.4:90064365-90064384 | None:intergenic | 35.0% | |
| TATGGTTATGGATGTCCTTA+GGG | + | chr4.4:90063124-90063143 | MS.gene034150:CDS | 35.0% | |
| TCAAGTGATAAAAGTCGATG+AGG | - | chr4.4:90064195-90064214 | None:intergenic | 35.0% | |
| TCCAGATTCGATAAAATCGA+AGG | - | chr4.4:90062579-90062598 | None:intergenic | 35.0% | |
| TCTGTTTATAAGCTTCCTCA+AGG | + | chr4.4:90062645-90062664 | MS.gene034150:CDS | 35.0% | |
| TGAAGCTTATTGTGCTTGAT+CGG | + | chr4.4:90063060-90063079 | MS.gene034150:CDS | 35.0% | |
| TGAATCCCACAATCAGTTAT+GGG | - | chr4.4:90066871-90066890 | None:intergenic | 35.0% | |
| TGACAGATTAGGATCATTTC+AGG | - | chr4.4:90062453-90062472 | None:intergenic | 35.0% | |
| TGATTTCGAGGTAAAGAAGA+AGG | - | chr4.4:90062398-90062417 | None:intergenic | 35.0% | |
| TGCAATATATGCTTCGATGA+TGG | + | chr4.4:90065287-90065306 | MS.gene034150:intron | 35.0% | |
| TGTTATGATGCTTAAGAAGG+AGG | + | chr4.4:90063232-90063251 | MS.gene034150:CDS | 35.0% | |
| TGTTTATAAGCTTCCTCAAG+GGG | + | chr4.4:90062647-90062666 | MS.gene034150:CDS | 35.0% | |
| TGTTTGCATTTCACTGAGTT+AGG | + | chr4.4:90065779-90065798 | MS.gene034150:intron | 35.0% | |
| TTATCACTTGAAGAGCAGAA+AGG | + | chr4.4:90064204-90064223 | MS.gene034150:CDS | 35.0% | |
| TTATGGGCACTTCATTGTTT+AGG | - | chr4.4:90066855-90066874 | None:intergenic | 35.0% | |
| TTGAGATCTCTGATTCTTTC+GGG | + | chr4.4:90063815-90063834 | MS.gene034150:CDS | 35.0% | |
| TTGATCTGTTTGCTTGATTC+TGG | - | chr4.4:90064819-90064838 | None:intergenic | 35.0% | |
| TTGATGTTACTGTCATCAAC+CGG | + | chr4.4:90064703-90064722 | MS.gene034150:CDS | 35.0% | |
| ! | ACAGTTACAAATGGTGGTTT+TGG | + | chr4.4:90062833-90062852 | MS.gene034150:CDS | 35.0% |
| ! | ATGTTTGGAGTTAGCAACTA+TGG | + | chr4.4:90064749-90064768 | MS.gene034150:CDS | 35.0% |
| ! | CAATCTGTCTATGCTTTTCA+GGG | + | chr4.4:90064504-90064523 | MS.gene034150:intron | 35.0% |
| ! | GTAATACTGGTGATGAGATA+AGG | + | chr4.4:90064053-90064072 | MS.gene034150:CDS | 35.0% |
| ! | GTTTAGTGTTTTGTCAGTTG+GGG | + | chr4.4:90064407-90064426 | MS.gene034150:intron | 35.0% |
| ! | TAAATTCTGGAGAGTTTCCT+TGG | - | chr4.4:90064730-90064749 | None:intergenic | 35.0% |
| ! | TACCTATATTTGTCGAGTTG+TGG | + | chr4.4:90064360-90064379 | MS.gene034150:intron | 35.0% |
| ! | TACTGTTGTGCATTTGTTGA+TGG | + | chr4.4:90063358-90063377 | MS.gene034150:CDS | 35.0% |
| ! | TAGGGAGATTATGGTTGATA+TGG | + | chr4.4:90063106-90063125 | MS.gene034150:CDS | 35.0% |
| ! | TATAACTTTAAGAGCACAGG+GGG | - | chr4.4:90065236-90065255 | None:intergenic | 35.0% |
| ! | TCAATCTGTCTATGCTTTTC+AGG | + | chr4.4:90064503-90064522 | MS.gene034150:intron | 35.0% |
| ! | TCCTTCGATTTTATCGAATC+TGG | + | chr4.4:90062575-90062594 | MS.gene034150:CDS | 35.0% |
| ! | TGTTTGGAGTTAGCAACTAT+GGG | + | chr4.4:90064750-90064769 | MS.gene034150:CDS | 35.0% |
| ! | TTCTATCATCACTAGGCTTT+TGG | + | chr4.4:90063469-90063488 | MS.gene034150:CDS | 35.0% |
| ! | TTGATAGGATCATTGATTGG+GGG | + | chr4.4:90062808-90062827 | MS.gene034150:CDS | 35.0% |
| ! | TTGCTGTGCTTGATTTGATT+TGG | + | chr4.4:90066915-90066934 | MS.gene034150:intron | 35.0% |
| ! | TTTAGTGTTTTGTCAGTTGG+GGG | + | chr4.4:90064408-90064427 | MS.gene034150:intron | 35.0% |
| !! | GCATTTGTTGATGGATTTCT+TGG | + | chr4.4:90063367-90063386 | MS.gene034150:CDS | 35.0% |
| !!! | CTGTATGCAAAGAGTGTTTT+TGG | + | chr4.4:90067074-90067093 | MS.gene034150:CDS | 35.0% |
| !!! | GTATGCAAAGAGTGTTTTTG+GGG | + | chr4.4:90067076-90067095 | MS.gene034150:CDS | 35.0% |
| AAATAGAGACGTAGAGGAGT+AGG | - | chr4.4:90065729-90065748 | None:intergenic | 40.0% | |
| AAGGTTTCTTCCACTGAAAC+TGG | + | chr4.4:90064849-90064868 | MS.gene034150:CDS | 40.0% | |
| AAGTGCCCATAACTGATTGT+GGG | + | chr4.4:90066863-90066882 | MS.gene034150:intron | 40.0% | |
| ACACCGCGAATAAATTCGTT+CGG | - | chr4.4:90062501-90062520 | None:intergenic | 40.0% | |
| ACATATGCTTCAGCATAGAC+AGG | - | chr4.4:90064657-90064676 | None:intergenic | 40.0% | |
| ACGAGCTTAAGAGGGATAAT+AGG | + | chr4.4:90063087-90063106 | MS.gene034150:CDS | 40.0% | |
| ACTCCTCTACGTCTCTATTT+GGG | + | chr4.4:90065729-90065748 | MS.gene034150:intron | 40.0% | |
| AGGGATCTCTGTCTTCTATT+GGG | + | chr4.4:90063789-90063808 | MS.gene034150:CDS | 40.0% | |
| AGTGGAAGAAACCTTGATGT+TGG | - | chr4.4:90064844-90064863 | None:intergenic | 40.0% | |
| ATACGGTATTGCAAGATGAG+AGG | + | chr4.4:90066656-90066675 | MS.gene034150:CDS | 40.0% | |
| ATAGGGAACACACAACACAA+AGG | - | chr4.4:90065648-90065667 | None:intergenic | 40.0% | |
| ATCCTCAGAGATGGTGTAAA+AGG | - | chr4.4:90063624-90063643 | None:intergenic | 40.0% | |
| ATCCTTTGTAAACTCTCCAG+TGG | - | chr4.4:90064580-90064599 | None:intergenic | 40.0% | |
| ATGATAGAAACACGCAGCTT+AGG | - | chr4.4:90063458-90063477 | None:intergenic | 40.0% | |
| ATGCCTGTAGCTATTCAAAG+TGG | - | chr4.4:90065884-90065903 | None:intergenic | 40.0% | |
| ATTGCAAACAGAACGATGTC+AGG | - | chr4.4:90065273-90065292 | None:intergenic | 40.0% | |
| CAAATTAAAGGAACTCACGG+TGG | - | chr4.4:90066730-90066749 | None:intergenic | 40.0% | |
| CAATCCGATGGTAAATTGAG+CGG | + | chr4.4:90067131-90067150 | MS.gene034150:CDS | 40.0% | |
| CAATTTGGTCCTGTCTTGAT+GGG | + | chr4.4:90066352-90066371 | MS.gene034150:intron | 40.0% | |
| CAGCATATCACTCATACTGT+GGG | - | chr4.4:90065918-90065937 | None:intergenic | 40.0% | |
| CATTGAGACCATGATCAACA+AGG | - | chr4.4:90063948-90063967 | None:intergenic | 40.0% | |
| CGAGCTTAAGAGGGATAATA+GGG | + | chr4.4:90063088-90063107 | MS.gene034150:CDS | 40.0% | |
| GAAGGAAGCTATAAATAGGC+AGG | + | chr4.4:90066306-90066325 | MS.gene034150:intron | 40.0% | |
| GAGGGATAATAGGGAGATTA+TGG | + | chr4.4:90063097-90063116 | MS.gene034150:CDS | 40.0% | |
| GCAACTATTAAGCAGTGTCT+TGG | + | chr4.4:90063590-90063609 | MS.gene034150:CDS | 40.0% | |
| GCTTATCTTAAGGTTGGAAG+AGG | + | chr4.4:90063880-90063899 | MS.gene034150:CDS | 40.0% | |
| GTATTGTTTGTCTCTTTCGG+AGG | + | chr4.4:90063553-90063572 | MS.gene034150:CDS | 40.0% | |
| TAAAAGTCGATGAGGTCATC+AGG | - | chr4.4:90064187-90064206 | None:intergenic | 40.0% | |
| TACAAATGTTGCGTCTGCTA+TGG | + | chr4.4:90063394-90063413 | MS.gene034150:CDS | 40.0% | |
| TACGGTATTGCAAGATGAGA+GGG | + | chr4.4:90066657-90066676 | MS.gene034150:CDS | 40.0% | |
| TACTCCTCTACGTCTCTATT+TGG | + | chr4.4:90065728-90065747 | MS.gene034150:intron | 40.0% | |
| TACTGCTTATTTCGATCCCT+GGG | + | chr4.4:90065119-90065138 | MS.gene034150:intron | 40.0% | |
| TCAATTTGGTCCTGTCTTGA+TGG | + | chr4.4:90066351-90066370 | MS.gene034150:intron | 40.0% | |
| TCACCGAACGAATTTATTCG+CGG | + | chr4.4:90062495-90062514 | MS.gene034150:CDS | 40.0% | |
| TCAGCATATCACTCATACTG+TGG | - | chr4.4:90065919-90065938 | None:intergenic | 40.0% | |
| TCCTCAGAGATGGTGTAAAA+GGG | - | chr4.4:90063623-90063642 | None:intergenic | 40.0% | |
| TGAGATAAGGAAGATATGGC+TGG | + | chr4.4:90064066-90064085 | MS.gene034150:CDS | 40.0% | |
| TGAGTTTGAGTGGGAAAACA+AGG | + | chr4.4:90065016-90065035 | MS.gene034150:CDS | 40.0% | |
| TGATAGAAACACGCAGCTTA+GGG | - | chr4.4:90063457-90063476 | None:intergenic | 40.0% | |
| TGCCTGTAGCTATTCAAAGT+GGG | - | chr4.4:90065883-90065902 | None:intergenic | 40.0% | |
| TGCCTTTGCTTTAATCTCCT+CGG | - | chr4.4:90064146-90064165 | None:intergenic | 40.0% | |
| TTACTGCTTATTTCGATCCC+TGG | + | chr4.4:90065118-90065137 | MS.gene034150:intron | 40.0% | |
| TTCACAGTCCTTGTTGATCA+TGG | + | chr4.4:90063937-90063956 | MS.gene034150:CDS | 40.0% | |
| ! | ATGAGAAGAATGGGGAGTAT+AGG | + | chr4.4:90063279-90063298 | MS.gene034150:CDS | 40.0% |
| ! | CTAGAAGCATGATTGTGACA+GGG | + | chr4.4:90066543-90066562 | MS.gene034150:intron | 40.0% |
| ! | CTTCTAGATGATGGCCAATT+TGG | - | chr4.4:90066530-90066549 | None:intergenic | 40.0% |
| ! | GATTCTGAGAAAGCTACAGA+TGG | - | chr4.4:90066390-90066409 | None:intergenic | 40.0% |
| ! | GCTGTTGTTTATGAATGTGC+TGG | + | chr4.4:90062945-90062964 | MS.gene034150:CDS | 40.0% |
| ! | TCTAGAAGCATGATTGTGAC+AGG | + | chr4.4:90066542-90066561 | MS.gene034150:intron | 40.0% |
| ! | TCTTGTGCTCTGTGGATTAT+TGG | + | chr4.4:90063527-90063546 | MS.gene034150:CDS | 40.0% |
| ! | TGAAGAGCAGAAAGGTATGA+TGG | + | chr4.4:90064212-90064231 | MS.gene034150:intron | 40.0% |
| ! | TGATAGGATCATTGATTGGG+GGG | + | chr4.4:90062809-90062828 | MS.gene034150:CDS | 40.0% |
| ! | TGCGTGTTTCTATCATCACT+AGG | + | chr4.4:90063462-90063481 | MS.gene034150:CDS | 40.0% |
| ! | TTGTGCTATTAAGTTTCCGG+AGG | + | chr4.4:90063328-90063347 | MS.gene034150:CDS | 40.0% |
| ! | TTTCGGGTGATTTCTTCCTT+GGG | + | chr4.4:90063831-90063850 | MS.gene034150:CDS | 40.0% |
| !! | ATGTGGCCTTTAGAACTATG+TGG | + | chr4.4:90064991-90065010 | MS.gene034150:CDS | 40.0% |
| !! | GGTTGATGACAGTAACATCA+AGG | - | chr4.4:90064704-90064723 | None:intergenic | 40.0% |
| !! | TGTGGCCTTTAGAACTATGT+GGG | + | chr4.4:90064992-90065011 | MS.gene034150:CDS | 40.0% |
| !! | TTTTACACCATCTCTGAGGA+TGG | + | chr4.4:90063623-90063642 | MS.gene034150:CDS | 40.0% |
| !!! | TACTTTTTGGGTGCAATGAC+AGG | - | chr4.4:90065582-90065601 | None:intergenic | 40.0% |
| AAAATGGAAAAATGGGGCCC+AGG | - | chr4.4:90065139-90065158 | None:intergenic | 45.0% | |
| AAATGGAAAAATGGGGCCCA+GGG | - | chr4.4:90065138-90065157 | None:intergenic | 45.0% | |
| AAGACTCAGAGCAATTCCCT+GGG | - | chr4.4:90067180-90067199 | None:intergenic | 45.0% | |
| AATCGCATTCTTCAGCTCAC+TGG | + | chr4.4:90064621-90064640 | MS.gene034150:CDS | 45.0% | |
| AATGTGTGATGCTGCTGTCT+GGG | + | chr4.4:90065851-90065870 | MS.gene034150:intron | 45.0% | |
| ACAAATGAGAGAAGGAGGAG+AGG | - | chr4.4:90065048-90065067 | None:intergenic | 45.0% | |
| ACACCCAAATAGAGACGTAG+AGG | - | chr4.4:90065735-90065754 | None:intergenic | 45.0% | |
| ACAGATCAAGGCCAACATCA+AGG | + | chr4.4:90064830-90064849 | MS.gene034150:CDS | 45.0% | |
| AGCAAGATGCTTCGAGTAAG+AGG | + | chr4.4:90062721-90062740 | MS.gene034150:CDS | 45.0% | |
| ATCGCATTCTTCAGCTCACT+GGG | + | chr4.4:90064622-90064641 | MS.gene034150:CDS | 45.0% | |
| ATGACGGTGATGAAGAGTTG+AGG | - | chr4.4:90062333-90062352 | None:intergenic | 45.0% | |
| CAGGGATCTCTGTCTTCTAT+TGG | + | chr4.4:90063788-90063807 | MS.gene034150:CDS | 45.0% | |
| CGTCTCTATTTGGGTGTGAA+AGG | + | chr4.4:90065738-90065757 | MS.gene034150:intron | 45.0% | |
| CTATTTGGGTGTGAAAGGAG+AGG | + | chr4.4:90065743-90065762 | MS.gene034150:intron | 45.0% | |
| CTCATCGTTCACTTCGACAA+AGG | + | chr4.4:90062195-90062214 | MS.gene034150:CDS | 45.0% | |
| CTTTAATCTCCTCGGTCTCA+CGG | - | chr4.4:90064138-90064157 | None:intergenic | 45.0% | |
| CTTTGTCGAAGTGAACGATG+AGG | - | chr4.4:90062197-90062216 | None:intergenic | 45.0% | |
| GACCGAGGAGATTAAAGCAA+AGG | + | chr4.4:90064141-90064160 | MS.gene034150:CDS | 45.0% | |
| GAGAACTTTACCGCGAGAAT+CGG | - | chr4.4:90062430-90062449 | None:intergenic | 45.0% | |
| GCTCAGTACACTTACTCATC+TGG | + | chr4.4:90064465-90064484 | MS.gene034150:intron | 45.0% | |
| GGTGATGAAGAGTTGAGGAA+TGG | - | chr4.4:90062328-90062347 | None:intergenic | 45.0% | |
| GTGAAAGGAGAGGTAGATCT+CGG | + | chr4.4:90065753-90065772 | MS.gene034150:intron | 45.0% | |
| TAATGTGTGATGCTGCTGTC+TGG | + | chr4.4:90065850-90065869 | MS.gene034150:intron | 45.0% | |
| TCGGCTTAACGAGCTTAAGA+GGG | + | chr4.4:90063079-90063098 | MS.gene034150:CDS | 45.0% | |
| TCTCTTGTTCAGCTCTGCAT+TGG | + | chr4.4:90067022-90067041 | MS.gene034150:intron | 45.0% | |
| TGCCACTGGAGAGTTTACAA+AGG | + | chr4.4:90064575-90064594 | MS.gene034150:CDS | 45.0% | |
| TGCCCACTTTGAATAGCTAC+AGG | + | chr4.4:90065878-90065897 | MS.gene034150:intron | 45.0% | |
| TGCTATTAAGTTTCCGGAGG+TGG | + | chr4.4:90063331-90063350 | MS.gene034150:CDS | 45.0% | |
| TTCGGGTGATTTCTTCCTTG+GGG | + | chr4.4:90063832-90063851 | MS.gene034150:CDS | 45.0% | |
| TTGGGGGGAACAGTTACAAA+TGG | + | chr4.4:90062824-90062843 | MS.gene034150:CDS | 45.0% | |
| TTGTTCAGCTCTGCATTGGA+AGG | + | chr4.4:90067026-90067045 | MS.gene034150:intron | 45.0% | |
| ! | ACCGATAAAACCGATTCTCG+CGG | + | chr4.4:90062417-90062436 | MS.gene034150:CDS | 45.0% |
| ! | AGCATTGAGAAGCAATCCGA+TGG | + | chr4.4:90067119-90067138 | MS.gene034150:CDS | 45.0% |
| ! | AGGGAATTGCTCTGAGTCTT+GGG | + | chr4.4:90067180-90067199 | MS.gene034150:CDS | 45.0% |
| ! | ATCGGCTTAACGAGCTTAAG+AGG | + | chr4.4:90063078-90063097 | MS.gene034150:CDS | 45.0% |
| ! | CTTTCGGGTGATTTCTTCCT+TGG | + | chr4.4:90063830-90063849 | MS.gene034150:CDS | 45.0% |
| ! | GAAAGTACGCGTACAGAAGT+TGG | - | chr4.4:90065441-90065460 | None:intergenic | 45.0% |
| ! | GAAGTGCCCATAACTGATTG+TGG | + | chr4.4:90066862-90066881 | MS.gene034150:intron | 45.0% |
| ! | GTACAGGTATGGTGCCAAAT+TGG | + | chr4.4:90066513-90066532 | MS.gene034150:intron | 45.0% |
| ! | TATGTGGGCTGAGTTTGAGT+GGG | + | chr4.4:90065007-90065026 | MS.gene034150:CDS | 45.0% |
| ! | TCCCTTTTACACCATCTCTG+AGG | + | chr4.4:90063619-90063638 | MS.gene034150:CDS | 45.0% |
| !! | ACACTGATGCTTTTCTGGCA+AGG | + | chr4.4:90065970-90065989 | MS.gene034150:intron | 45.0% |
| !! | ACCGCGAGAATCGGTTTTAT+CGG | - | chr4.4:90062421-90062440 | None:intergenic | 45.0% |
| !! | CGGTTTTATCGGTGATTTCG+AGG | - | chr4.4:90062410-90062429 | None:intergenic | 45.0% |
| !! | CTCAGCCCACATAGTTCTAA+AGG | - | chr4.4:90065000-90065019 | None:intergenic | 45.0% |
| !! | TAGACTTGATAATGTGGCCC+AGG | - | chr4.4:90066687-90066706 | None:intergenic | 45.0% |
| !! | TGGATGTGGTTGTTTTCGTG+CGG | + | chr4.4:90063414-90063433 | MS.gene034150:CDS | 45.0% |
| !!! | TGTTTTTGGGGAAGATGCTC+TGG | + | chr4.4:90067088-90067107 | MS.gene034150:CDS | 45.0% |
| AAAGGAGAGGTAGATCTCGG+TGG | + | chr4.4:90065756-90065775 | MS.gene034150:intron | 50.0% | |
| AAGACAGAGATCCCTGCACA+AGG | - | chr4.4:90063784-90063803 | None:intergenic | 50.0% | |
| ACAGCGTTTCGTCTCACGAA+AGG | - | chr4.4:90062612-90062631 | None:intergenic | 50.0% | |
| ACTCGACCACTGTGTCTTCT+AGG | + | chr4.4:90063684-90063703 | MS.gene034150:CDS | 50.0% | |
| AGACAGAGATCCCTGCACAA+GGG | - | chr4.4:90063783-90063802 | None:intergenic | 50.0% | |
| AGAGGGTCAGGAGACATCAA+AGG | + | chr4.4:90063646-90063665 | MS.gene034150:CDS | 50.0% | |
| AGATATGGCTGGAATCCTGC+AGG | + | chr4.4:90064077-90064096 | MS.gene034150:CDS | 50.0% | |
| AGGTTGTTAAGACGCAGAGC+GGG | + | chr4.4:90063252-90063271 | MS.gene034150:CDS | 50.0% | |
| AGTCTCAAGAGCAGCACTCT+GGG | - | chr4.4:90063744-90063763 | None:intergenic | 50.0% | |
| ATGGTCTCAATGCTGCAGCT+TGG | + | chr4.4:90063956-90063975 | MS.gene034150:CDS | 50.0% | |
| CAAGACTCAGAGCAATTCCC+TGG | - | chr4.4:90067181-90067200 | None:intergenic | 50.0% | |
| CAAGATGAGAGGGAGTTCCT+GGG | + | chr4.4:90066667-90066686 | MS.gene034150:CDS | 50.0% | |
| CCAACTTGAGCTCGAAGATG+AGG | + | chr4.4:90064533-90064552 | MS.gene034150:CDS | 50.0% | |
| CCTCATCTTCGAGCTCAAGT+TGG | - | chr4.4:90064536-90064555 | None:intergenic | 50.0% | |
| CTATCAGATTCGGGCTGCTA+GGG | + | chr4.4:90063499-90063518 | MS.gene034150:CDS | 50.0% | |
| GACGATCTTAAACGTGCCAC+TGG | + | chr4.4:90064561-90064580 | MS.gene034150:CDS | 50.0% | |
| GAGGAATGGTTTCGCCGTTA+AGG | - | chr4.4:90062314-90062333 | None:intergenic | 50.0% | |
| GAGGTTGTTAAGACGCAGAG+CGG | + | chr4.4:90063251-90063270 | MS.gene034150:CDS | 50.0% | |
| GCGTCCACAAAACTACACTC+TGG | + | chr4.4:90064791-90064810 | MS.gene034150:CDS | 50.0% | |
| GGGGGAACAGTTACAAATGG+TGG | + | chr4.4:90062827-90062846 | MS.gene034150:CDS | 50.0% | |
| GTATAGGCAGATGTTGGTGC+AGG | + | chr4.4:90063295-90063314 | MS.gene034150:CDS | 50.0% | |
| TACTGTCATCAACCGGACCA+AGG | + | chr4.4:90064710-90064729 | MS.gene034150:CDS | 50.0% | |
| TCTATCAGATTCGGGCTGCT+AGG | + | chr4.4:90063498-90063517 | MS.gene034150:CDS | 50.0% | |
| TCTCTTTCGGAGGTTGAGAG+TGG | + | chr4.4:90063563-90063582 | MS.gene034150:CDS | 50.0% | |
| TCTGCATTGGAAGGTGAGTG+TGG | + | chr4.4:90067035-90067054 | MS.gene034150:CDS | 50.0% | |
| TCTGGAGAGTTTCCTTGGTC+CGG | - | chr4.4:90064725-90064744 | None:intergenic | 50.0% | |
| TGTACGCGTACTTTCCACCT+TGG | + | chr4.4:90065446-90065465 | MS.gene034150:intron | 50.0% | |
| TGTTGCGTCTGCTATGGATG+TGG | + | chr4.4:90063400-90063419 | MS.gene034150:CDS | 50.0% | |
| TTGATTTCGGTTGCGAGTGC+TGG | - | chr4.4:90062225-90062244 | None:intergenic | 50.0% | |
| TTTCCCAAGCCCATCAAGAC+AGG | - | chr4.4:90066364-90066383 | None:intergenic | 50.0% | |
| ! | ACCATCTCTGAGGATGGAGA+GGG | + | chr4.4:90063629-90063648 | MS.gene034150:CDS | 50.0% |
| ! | ATTCGCAGCCGCTTTAATCG+CGG | - | chr4.4:90063000-90063019 | None:intergenic | 50.0% |
| ! | CAGGGAATTGCTCTGAGTCT+TGG | + | chr4.4:90067179-90067198 | MS.gene034150:CDS | 50.0% |
| ! | CTATGTGGGCTGAGTTTGAG+TGG | + | chr4.4:90065006-90065025 | MS.gene034150:CDS | 50.0% |
| ! | GAGCTTTGTGAAGATGCTCG+CGG | + | chr4.4:90064102-90064121 | MS.gene034150:CDS | 50.0% |
| ! | GGGAATTGCTCTGAGTCTTG+GGG | + | chr4.4:90067181-90067200 | MS.gene034150:CDS | 50.0% |
| ! | GGGTTTGTTCTTGTGCTCTG+TGG | + | chr4.4:90063519-90063538 | MS.gene034150:CDS | 50.0% |
| ! | TCCTGCATCTTGTGCTGATG+TGG | + | chr4.4:90064974-90064993 | MS.gene034150:CDS | 50.0% |
| ! | TGGGGAGTATAGGCAGATGT+TGG | + | chr4.4:90063289-90063308 | MS.gene034150:CDS | 50.0% |
| !! | AGTGAGGACGTAACGGATGA+CGG | - | chr4.4:90062349-90062368 | None:intergenic | 50.0% |
| !! | GGAGCCAGAGTGTAGTTTTG+TGG | - | chr4.4:90064798-90064817 | None:intergenic | 50.0% |
| !! | GGATGTGGTTGTTTTCGTGC+GGG | + | chr4.4:90063415-90063434 | MS.gene034150:CDS | 50.0% |
| !! | TAGGAGTCGAAAGTGCCCTA+AGG | - | chr4.4:90063142-90063161 | None:intergenic | 50.0% |
| AAGGAACTCACGGTGGAGTC+AGG | - | chr4.4:90066723-90066742 | None:intergenic | 55.0% | |
| ACAACAGTACTCGCCACCTC+CGG | - | chr4.4:90063347-90063366 | None:intergenic | 55.0% | |
| ACCCTCTCCATCCTCAGAGA+TGG | - | chr4.4:90063633-90063652 | None:intergenic | 55.0% | |
| AGAGATCCCTGCACAAGGGT+AGG | - | chr4.4:90063779-90063798 | None:intergenic | 55.0% | |
| AGCAGCACTCTGGGTAGCAT+AGG | - | chr4.4:90063735-90063754 | None:intergenic | 55.0% | |
| AGGCCTCCTAGAAGACACAG+TGG | - | chr4.4:90063693-90063712 | None:intergenic | 55.0% | |
| CAGTCTCAAGAGCAGCACTC+TGG | - | chr4.4:90063745-90063764 | None:intergenic | 55.0% | |
| CGACCACTGTGTCTTCTAGG+AGG | + | chr4.4:90063687-90063706 | MS.gene034150:CDS | 55.0% | |
| CGTCGCAAGTGAGGACGTAA+CGG | - | chr4.4:90062356-90062375 | None:intergenic | 55.0% | |
| CTGGGTAGCATAGGTCCCAT+CGG | - | chr4.4:90063726-90063745 | None:intergenic | 55.0% | |
| CTTCACAAAGCTCTGCCTGC+AGG | - | chr4.4:90064095-90064114 | None:intergenic | 55.0% | |
| GACATCAAAGGCTGTGCAGC+AGG | + | chr4.4:90063658-90063677 | MS.gene034150:CDS | 55.0% | |
| GAGGTCATCAGGCTGTGCAT+TGG | - | chr4.4:90064176-90064195 | None:intergenic | 55.0% | |
| GCAAGATGAGAGGGAGTTCC+TGG | + | chr4.4:90066666-90066685 | MS.gene034150:CDS | 55.0% | |
| GCCACATCAGCACAAGATGC+AGG | - | chr4.4:90064978-90064997 | None:intergenic | 55.0% | |
| GGTTGTTAAGACGCAGAGCG+GGG | + | chr4.4:90063253-90063272 | MS.gene034150:CDS | 55.0% | |
| TACATGCGACAACTGCCCCA+AGG | - | chr4.4:90063850-90063869 | None:intergenic | 55.0% | |
| TCAAGCAACTGCTCCCCTTG+AGG | - | chr4.4:90062663-90062682 | None:intergenic | 55.0% | |
| TGAGCTCGAAGATGAGGTGC+AGG | + | chr4.4:90064539-90064558 | MS.gene034150:CDS | 55.0% | |
| ! | AGCGGGGAGCATGAGAAGAA+TGG | + | chr4.4:90063269-90063288 | MS.gene034150:CDS | 55.0% |
| ! | CACCATCTCTGAGGATGGAG+AGG | + | chr4.4:90063628-90063647 | MS.gene034150:CDS | 55.0% |
| ! | CGGGGAGCATGAGAAGAATG+GGG | + | chr4.4:90063271-90063290 | MS.gene034150:CDS | 55.0% |
| ! | GCGGGGAGCATGAGAAGAAT+GGG | + | chr4.4:90063270-90063289 | MS.gene034150:CDS | 55.0% |
| ! | TGCACCGACCGCGATTAAAG+CGG | + | chr4.4:90062989-90063008 | MS.gene034150:CDS | 55.0% |
| !! | GGTCCTGTCTTGATGGGCTT+GGG | + | chr4.4:90066358-90066377 | MS.gene034150:intron | 55.0% |
| !! | TGGTCCTGTCTTGATGGGCT+TGG | + | chr4.4:90066357-90066376 | MS.gene034150:intron | 55.0% |
| AGGCCTGCGATTCTTGCCGA+TGG | + | chr4.4:90063707-90063726 | MS.gene034150:CDS | 60.0% | |
| CACAAGGGTAGGCGGTGACA+TGG | - | chr4.4:90063768-90063787 | None:intergenic | 60.0% | |
| CGCGGTCGGTGCAGAACTAA+GGG | - | chr4.4:90062982-90063001 | None:intergenic | 60.0% | |
| CGGTGTGATCGTCGCAAGTG+AGG | - | chr4.4:90062365-90062384 | None:intergenic | 60.0% | |
| GATCCCTGCACAAGGGTAGG+CGG | - | chr4.4:90063776-90063795 | None:intergenic | 60.0% | |
| GGCCTGCGATTCTTGCCGAT+GGG | + | chr4.4:90063708-90063727 | MS.gene034150:CDS | 60.0% | |
| GTCCCATCGGCAAGAATCGC+AGG | - | chr4.4:90063713-90063732 | None:intergenic | 60.0% | |
| TCACCGCCTACCCTTGTGCA+GGG | + | chr4.4:90063770-90063789 | MS.gene034150:CDS | 60.0% | |
| TCGCGGTCGGTGCAGAACTA+AGG | - | chr4.4:90062983-90063002 | None:intergenic | 60.0% | |
| ! | CTCTGAGGATGGAGAGGGTC+AGG | + | chr4.4:90063634-90063653 | MS.gene034150:CDS | 60.0% |
| ! | GCAGCCGCTTTAATCGCGGT+CGG | - | chr4.4:90062996-90063015 | None:intergenic | 60.0% |
| GTCACCGCCTACCCTTGTGC+AGG | + | chr4.4:90063769-90063788 | MS.gene034150:CDS | 65.0% | |
| TAAGCAGCGCCGTGAGACCG+AGG | + | chr4.4:90064126-90064145 | MS.gene034150:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 90062177 | 90067241 | 90062177 | ID=MS.gene034150 |
| chr4.4 | mRNA | 90062177 | 90067241 | 90062177 | ID=MS.gene034150.t1;Parent=MS.gene034150 |
| chr4.4 | exon | 90062177 | 90064225 | 90062177 | ID=MS.gene034150.t1.exon1;Parent=MS.gene034150.t1 |
| chr4.4 | CDS | 90062177 | 90064225 | 90062177 | ID=cds.MS.gene034150.t1;Parent=MS.gene034150.t1 |
| chr4.4 | exon | 90064525 | 90065037 | 90064525 | ID=MS.gene034150.t1.exon2;Parent=MS.gene034150.t1 |
| chr4.4 | CDS | 90064525 | 90065037 | 90064525 | ID=cds.MS.gene034150.t1;Parent=MS.gene034150.t1 |
| chr4.4 | exon | 90066646 | 90066731 | 90066646 | ID=MS.gene034150.t1.exon3;Parent=MS.gene034150.t1 |
| chr4.4 | CDS | 90066646 | 90066731 | 90066646 | ID=cds.MS.gene034150.t1;Parent=MS.gene034150.t1 |
| chr4.4 | exon | 90067034 | 90067241 | 90067034 | ID=MS.gene034150.t1.exon4;Parent=MS.gene034150.t1 |
| chr4.4 | CDS | 90067034 | 90067241 | 90067034 | ID=cds.MS.gene034150.t1;Parent=MS.gene034150.t1 |
| Gene Sequence |
| Protein sequence |
