Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029611.t1 | XP_013470032.1 | 99.1 | 563 | 5 | 0 | 1 | 563 | 1 | 563 | 0.00E+00 | 1138.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029611.t1 | Q93ZR1 | 91.3 | 562 | 49 | 0 | 2 | 563 | 4 | 565 | 7.2e-311 | 1067.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029611.t1 | A0A072W1A9 | 99.1 | 563 | 5 | 0 | 1 | 563 | 1 | 563 | 0.0e+00 | 1138.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene029611.t1 | TR | GNAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029611 | MS.gene072220 | PPI |
| MS.gene029611 | MS.gene072221 | PPI |
| MS.gene029611 | MS.gene011065 | PPI |
| MS.gene029611 | MS.gene015202 | PPI |
| MS.gene020313 | MS.gene029611 | PPI |
| MS.gene015206 | MS.gene029611 | PPI |
| MS.gene029611 | MS.gene68716 | PPI |
| MS.gene029611 | MS.gene75146 | PPI |
| MS.gene029611 | MS.gene063067 | PPI |
| MS.gene029611 | MS.gene09543 | PPI |
| MS.gene04820 | MS.gene029611 | PPI |
| MS.gene029611 | MS.gene46303 | PPI |
| MS.gene68113 | MS.gene029611 | PPI |
| MS.gene029611 | MS.gene014181 | PPI |
| MS.gene029611 | MS.gene90863 | PPI |
| MS.gene037409 | MS.gene029611 | PPI |
| MS.gene029611 | MS.gene09540 | PPI |
| MS.gene029611 | MS.gene36633 | PPI |
| MS.gene029611 | MS.gene018762 | PPI |
| MS.gene029611 | MS.gene20245 | PPI |
| MS.gene029611 | MS.gene36746 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029611.t1 | MTR_1g107255 | 99.112 | 563 | 5 | 0 | 1 | 563 | 1 | 563 | 0.0 | 1157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029611.t1 | AT5G50320 | 91.281 | 562 | 49 | 0 | 2 | 563 | 4 | 565 | 0.0 | 1086 |
Find 177 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCGTGAGCTCCATGTTTA+TGG | 0.109347 | 1.3:+73412168 | MS.gene029611:CDS |
| CCACCTCTTCTGGTTTAATT+TGG | 0.193138 | 1.3:-73411744 | None:intergenic |
| TCAGGTTGAGTTTATATTAA+TGG | 0.195676 | 1.3:+73409488 | MS.gene029611:intron |
| CACTACTTGTCCAGAGCTTA+TGG | 0.210436 | 1.3:+73412131 | MS.gene029611:CDS |
| ACGCCATTACTACAGAAAAT+TGG | 0.214514 | 1.3:+73412604 | MS.gene029611:CDS |
| CGAACAAGTTCCACCTCTTC+TGG | 0.222979 | 1.3:-73411754 | None:intergenic |
| ACTAAGATAGCTGTAATTTC+TGG | 0.226240 | 1.3:+73412572 | MS.gene029611:CDS |
| GACAGGTTTGGCTCGGAGTT+TGG | 0.254447 | 1.3:-73409003 | None:intergenic |
| ATTACCGTGATTACTTTATA+AGG | 0.254776 | 1.3:+73409538 | MS.gene029611:CDS |
| ACTTGTTCGTCGTGATTATA+TGG | 0.272919 | 1.3:+73411768 | MS.gene029611:CDS |
| CCAATGCCTTTGGTGACCTC+TGG | 0.281758 | 1.3:+73411492 | MS.gene029611:CDS |
| GGCAATCATCTCAACAAGTT+TGG | 0.292527 | 1.3:-73408946 | None:intergenic |
| GGGTTATGGTACGCTTCTTA+TGG | 0.292786 | 1.3:+73412511 | MS.gene029611:intron |
| CAGGTTGAGTTTATATTAAT+GGG | 0.294302 | 1.3:+73409489 | MS.gene029611:intron |
| CTACCTCTTGTCTGCACATA+AGG | 0.308325 | 1.3:-73409326 | None:intergenic |
| CTTGAGCAGGATATCCTTGT+TGG | 0.326582 | 1.3:+73412078 | MS.gene029611:intron |
| AATTATTGTTAACAGGGTTA+TGG | 0.336285 | 1.3:+73412497 | MS.gene029611:intron |
| TTACTGATTATTATTACATT+AGG | 0.340713 | 1.3:-73412661 | None:intergenic |
| ATTGATCAGCTTAAGCGTTT+AGG | 0.349355 | 1.3:+73409350 | MS.gene029611:CDS |
| CTTTATGAGCTCTGGAAAAC+TGG | 0.356965 | 1.3:+73411244 | MS.gene029611:CDS |
| CAATGCCTTTGGTGACCTCT+GGG | 0.357014 | 1.3:+73411493 | MS.gene029611:CDS |
| ACAGGTTTGGCTCGGAGTTT+GGG | 0.357757 | 1.3:-73409002 | None:intergenic |
| ACTCTTGTAATACGTGGAAC+TGG | 0.357820 | 1.3:+73411220 | MS.gene029611:CDS |
| GGGTTGAGAAAGGGAATCTA+AGG | 0.374003 | 1.3:+73411514 | MS.gene029611:CDS |
| ATTAGGTATTTCATCATGTA+AGG | 0.374054 | 1.3:-73412644 | None:intergenic |
| AGGAGGCCAGATTATTGTCT+TGG | 0.377113 | 1.3:+73410555 | MS.gene029611:intron |
| AATCTTCATGATGCTTTGTC+TGG | 0.377549 | 1.3:+73409561 | MS.gene029611:CDS |
| GCAATCATCTCAACAAGTTT+GGG | 0.381513 | 1.3:-73408945 | None:intergenic |
| TACCTGGATTCCAGCTTCTC+TGG | 0.383322 | 1.3:-73411592 | None:intergenic |
| TCTGCTGCGTGCCGTAAGTA+TGG | 0.383722 | 1.3:+73408909 | MS.gene029611:CDS |
| TCCCTTTCAACACCAACATT+TGG | 0.384171 | 1.3:-73411130 | None:intergenic |
| TGGAACTTTCATGTCCCTTC+CGG | 0.386776 | 1.3:+73409512 | MS.gene029611:CDS |
| GGAACTGCTGTACCGGTTCA+TGG | 0.389741 | 1.3:+73412189 | MS.gene029611:CDS |
| AGAACCTCTCGTTCGGAGTC+TGG | 0.399137 | 1.3:-73408975 | None:intergenic |
| CTAAGATAGCTGTAATTTCT+GGG | 0.402023 | 1.3:+73412573 | MS.gene029611:CDS |
| CGCCATTACTACAGAAAATT+GGG | 0.402981 | 1.3:+73412605 | MS.gene029611:CDS |
| CTGAGTACTGTATTCAAAAT+CGG | 0.405571 | 1.3:-73409135 | None:intergenic |
| GCGGGATATTCCAATGCCTT+TGG | 0.406417 | 1.3:+73411482 | MS.gene029611:CDS |
| GGCTAAAGACGCCGGTTTCA+AGG | 0.407082 | 1.3:+73410710 | MS.gene029611:CDS |
| AAACCTGTCCGAACCGCATC+TGG | 0.408430 | 1.3:+73409017 | MS.gene029611:CDS |
| CCTGGGAAAGGAGGCTTTGA+AGG | 0.415150 | 1.3:+73408777 | MS.gene029611:CDS |
| GTTTAAAATGTCGTGATGTT+CGG | 0.419207 | 1.3:+73411568 | MS.gene029611:CDS |
| GAGCATTGAGATCAACTTTG+TGG | 0.431098 | 1.3:-73408881 | None:intergenic |
| CAACATCCTCGTAAGTGCTT+TGG | 0.432775 | 1.3:-73410632 | None:intergenic |
| GTGACCTCTGGGGTTGAGAA+AGG | 0.437552 | 1.3:+73411504 | MS.gene029611:CDS |
| GGAGGCCAGATTATTGTCTT+GGG | 0.438031 | 1.3:+73410556 | MS.gene029611:intron |
| TTCTTACGGTTGTACACGAT+TGG | 0.440324 | 1.3:+73410599 | MS.gene029611:CDS |
| ACACCAACATTTGGAAGATC+AGG | 0.441020 | 1.3:-73411121 | None:intergenic |
| ATTATATGGCAAATGAAGGT+TGG | 0.442902 | 1.3:+73411782 | MS.gene029611:CDS |
| TGCTCGAATTGCACGCATAC+TGG | 0.443181 | 1.3:-73409180 | None:intergenic |
| TGCTGTACCGGTTCATGGGC+GGG | 0.453368 | 1.3:+73412194 | MS.gene029611:CDS |
| GGCAGCTGCAATGGTGGCGG+AGG | 0.455678 | 1.3:+73408737 | MS.gene029611:CDS |
| GGTTGTACACGATTGGAGAT+TGG | 0.457491 | 1.3:+73410606 | MS.gene029611:CDS |
| TCAGAATCCCGCCCATGAAC+CGG | 0.459387 | 1.3:-73412201 | None:intergenic |
| GACACAAATGTTACCGGTGG+TGG | 0.462023 | 1.3:-73409090 | None:intergenic |
| TTCCAAATGTTGGTGTTGAA+AGG | 0.463184 | 1.3:+73411128 | MS.gene029611:CDS |
| GCAGTAGACACAAATGTTAC+CGG | 0.465327 | 1.3:-73409096 | None:intergenic |
| ACTACTTGTCCAGAGCTTAT+GGG | 0.466121 | 1.3:+73412132 | MS.gene029611:CDS |
| TCCAAATGTTGGTGTTGAAA+GGG | 0.466271 | 1.3:+73411129 | MS.gene029611:CDS |
| AAATCGGAGTCAGGACCGCC+AGG | 0.474986 | 1.3:-73409119 | None:intergenic |
| GATGTTCGGACCAGAGAAGC+TGG | 0.475031 | 1.3:+73411582 | MS.gene029611:CDS |
| TTATATGGCAAATGAAGGTT+GGG | 0.475457 | 1.3:+73411783 | MS.gene029611:CDS |
| AGATGCGGTTCGGACAGGTT+TGG | 0.477276 | 1.3:-73409015 | None:intergenic |
| CCAGAGGTCACCAAAGGCAT+TGG | 0.478943 | 1.3:-73411492 | None:intergenic |
| AGTCCCTTGTTTAGAGCAGA+TGG | 0.482729 | 1.3:+73411181 | MS.gene029611:CDS |
| TGAAACCGGCGTCTTTAGCC+AGG | 0.483067 | 1.3:-73410707 | None:intergenic |
| AACATTTGTGTCTACTGCCC+TGG | 0.483658 | 1.3:+73409101 | MS.gene029611:CDS |
| CCTTCAAAGCCTCCTTTCCC+AGG | 0.487403 | 1.3:-73408777 | None:intergenic |
| GAACTGGGCTTTATGAGCTC+TGG | 0.487484 | 1.3:+73411236 | MS.gene029611:CDS |
| CTCTTGTAATACGTGGAACT+GGG | 0.488163 | 1.3:+73411221 | MS.gene029611:CDS |
| GGGAAGAAGAACCTCTCGTT+CGG | 0.489882 | 1.3:-73408982 | None:intergenic |
| ATACCAGATGCGGTTCGGAC+AGG | 0.493768 | 1.3:-73409020 | None:intergenic |
| CTGTATTCAAAATCGGAGTC+AGG | 0.494942 | 1.3:-73409128 | None:intergenic |
| CGGCTATACCAGATGCGGTT+CGG | 0.497683 | 1.3:-73409025 | None:intergenic |
| TACCTCTTGTCTGCACATAA+GGG | 0.499999 | 1.3:-73409325 | None:intergenic |
| ACAGTAACAAACCTTGAAAC+CGG | 0.500422 | 1.3:-73410721 | None:intergenic |
| TGTTTATGGAACTGCTGTAC+CGG | 0.502199 | 1.3:+73412182 | MS.gene029611:CDS |
| TGAGGCCCAAGACAATAATC+TGG | 0.507785 | 1.3:-73410561 | None:intergenic |
| ATAGCTGTAATTTCTGGGGT+TGG | 0.510369 | 1.3:+73412578 | MS.gene029611:CDS |
| CATAGTGCAACCAAGTGTAT+TGG | 0.511814 | 1.3:+73409627 | MS.gene029611:CDS |
| GACCAGAGAAGCTGGAATCC+AGG | 0.513139 | 1.3:+73411590 | MS.gene029611:CDS |
| CTGCGACAAATGCTTTCTTA+CGG | 0.521566 | 1.3:+73410585 | MS.gene029611:CDS |
| CGGTTCGGACAGGTTTGGCT+CGG | 0.522558 | 1.3:-73409010 | None:intergenic |
| CGCGTGCTTCTTCTTCACTA+AGG | 0.522784 | 1.3:-73408806 | None:intergenic |
| ATCGAGAATGGCAGCTGCAA+TGG | 0.524231 | 1.3:+73408728 | None:intergenic |
| CGTGATTATATGGCAAATGA+AGG | 0.524748 | 1.3:+73411778 | MS.gene029611:CDS |
| GGAGTTAGCATTAGCTCGAA+TGG | 0.524838 | 1.3:+73411536 | MS.gene029611:CDS |
| AATTGTCATGCCAATACACT+TGG | 0.525376 | 1.3:-73409637 | None:intergenic |
| ACTCTATAAACACGCGTCCA+TGG | 0.528985 | 1.3:-73411456 | None:intergenic |
| AAGCCTCCTTTCCCAGGACG+TGG | 0.530868 | 1.3:-73408771 | None:intergenic |
| CGCCTCTTCTACATTGGCAG+AGG | 0.532370 | 1.3:-73409589 | None:intergenic |
| TGCCCTCACATTGCCACCAC+CGG | 0.535961 | 1.3:+73409077 | MS.gene029611:CDS |
| AATTGGGATATGAGCTTGAA+GGG | 0.539350 | 1.3:+73412621 | MS.gene029611:CDS |
| CGTCACCGCCTCTTCTACAT+TGG | 0.539713 | 1.3:-73409595 | None:intergenic |
| AAAGGAGGCTTTGAAGGCCA+CGG | 0.542814 | 1.3:+73408783 | MS.gene029611:CDS |
| ATTAGCTCGAATGGAAGACT+TGG | 0.543470 | 1.3:+73411545 | MS.gene029611:CDS |
| GTCATATGAAGATACACGGC+AGG | 0.543921 | 1.3:+73411816 | MS.gene029611:CDS |
| AATGGCAGCTGCAATGGTGG+CGG | 0.544495 | 1.3:+73408734 | None:intergenic |
| AACTTTCATGTCCCTTCCGG+CGG | 0.546193 | 1.3:+73409515 | MS.gene029611:CDS |
| GAACTGCTGTACCGGTTCAT+GGG | 0.546285 | 1.3:+73412190 | MS.gene029611:CDS |
| ATGAGCTCTGGAAAACTGGC+AGG | 0.546949 | 1.3:+73411248 | MS.gene029611:CDS |
| GAACACTTACCCATAAGCTC+TGG | 0.547667 | 1.3:-73412141 | None:intergenic |
| ATGATGTCCACAAGTTGCTC+AGG | 0.548538 | 1.3:-73411408 | None:intergenic |
| AAGCCCATCTGCTCTAAACA+AGG | 0.553799 | 1.3:-73411185 | None:intergenic |
| CCAAATTAAACCAGAAGAGG+TGG | 0.554019 | 1.3:+73411744 | MS.gene029611:CDS |
| TGACCTCTGGGGTTGAGAAA+GGG | 0.554088 | 1.3:+73411505 | MS.gene029611:CDS |
| CTGCTGTACCGGTTCATGGG+CGG | 0.556681 | 1.3:+73412193 | MS.gene029611:CDS |
| GCTCTGGACAAGTAGTGTTA+CGG | 0.560794 | 1.3:-73412125 | None:intergenic |
| TGGTACGCTTCTTATGGAGG+AGG | 0.562129 | 1.3:+73412517 | MS.gene029611:CDS |
| CACGTGAGAGGCCATACTTA+CGG | 0.562539 | 1.3:-73408920 | None:intergenic |
| ATGGTCGACTTATCTCATAA+AGG | 0.565397 | 1.3:+73408858 | MS.gene029611:CDS |
| CTTCTTCTTCACTAAGGCCG+TGG | 0.565667 | 1.3:-73408800 | None:intergenic |
| AAGGCACCACGTCCTGGGAA+AGG | 0.568173 | 1.3:+73408765 | MS.gene029611:CDS |
| AAATTGGGATATGAGCTTGA+AGG | 0.569511 | 1.3:+73412620 | MS.gene029611:CDS |
| GCGTGTTTATAGAGTTCAGC+GGG | 0.572842 | 1.3:+73411464 | MS.gene029611:CDS |
| TTATGGTACGCTTCTTATGG+AGG | 0.577351 | 1.3:+73412514 | MS.gene029611:CDS |
| AACCCTTATGTGCAGACAAG+AGG | 0.578250 | 1.3:+73409323 | MS.gene029611:CDS |
| ATGTCCACAAGTTGCTCAGG+TGG | 0.579117 | 1.3:-73411405 | None:intergenic |
| TCCTTGCAATGGTACCTCCA+TGG | 0.582174 | 1.3:+73411439 | MS.gene029611:CDS |
| TTAGCTCGAATGGAAGACTT+GGG | 0.582791 | 1.3:+73411546 | MS.gene029611:CDS |
| CGTAAGAAAGCATTTGTCGC+AGG | 0.582996 | 1.3:-73410584 | None:intergenic |
| TTATCCACCTGAGCAACTTG+TGG | 0.584183 | 1.3:+73411401 | MS.gene029611:CDS |
| TTGTTACGACTGCGAAAATG+TGG | 0.584825 | 1.3:+73412102 | MS.gene029611:CDS |
| CACCTCTGCCAATGTAGAAG+AGG | 0.586680 | 1.3:+73409587 | MS.gene029611:CDS |
| CGAATTGCACGCATACTGGT+AGG | 0.587485 | 1.3:-73409176 | None:intergenic |
| GTTGAGTTTATATTAATGGG+TGG | 0.587623 | 1.3:+73409492 | MS.gene029611:CDS |
| GTCCCTTGTTTAGAGCAGAT+GGG | 0.588499 | 1.3:+73411182 | MS.gene029611:CDS |
| GTTGCTCGTGACACTAATAG+AGG | 0.589637 | 1.3:+73410651 | MS.gene029611:CDS |
| TGCAGAGATTGTAAACTCCA+TGG | 0.589639 | 1.3:+73408839 | MS.gene029611:CDS |
| TTCTGACAAGCTACAACACC+AGG | 0.589825 | 1.3:+73412218 | MS.gene029611:CDS |
| CAAGTTTGGGTGCACGTGAG+AGG | 0.590702 | 1.3:-73408932 | None:intergenic |
| TCACCAAATTAAACCAGAAG+AGG | 0.591716 | 1.3:+73411741 | MS.gene029611:CDS |
| GGAGTTTACAATCTCTGCAA+TGG | 0.592885 | 1.3:-73408835 | None:intergenic |
| ATGCCTGATCTTCCAAATGT+TGG | 0.593013 | 1.3:+73411118 | MS.gene029611:CDS |
| TACCCCACTCTTGTAATACG+TGG | 0.597220 | 1.3:+73411214 | MS.gene029611:CDS |
| GAGAATGGCAGCTGCAATGG+TGG | 0.601590 | 1.3:+73408731 | None:intergenic |
| AAGTAATCACGGTAATCCGC+CGG | 0.605266 | 1.3:-73409531 | None:intergenic |
| GAAAGCATTTGTCGCAGGTG+AGG | 0.608219 | 1.3:-73410579 | None:intergenic |
| GTTCCACGTATTACAAGAGT+GGG | 0.609518 | 1.3:-73411217 | None:intergenic |
| CTCTGCCAATGTAGAAGAGG+CGG | 0.613175 | 1.3:+73409590 | MS.gene029611:CDS |
| GCACCACGTCCTGGGAAAGG+AGG | 0.613203 | 1.3:+73408768 | MS.gene029611:CDS |
| TCCATGGAGGTACCATTGCA+AGG | 0.615787 | 1.3:-73411440 | None:intergenic |
| AGTTCCACGTATTACAAGAG+TGG | 0.617723 | 1.3:-73411218 | None:intergenic |
| GATTCCTTATAAAGTAATCA+CGG | 0.618997 | 1.3:-73409542 | None:intergenic |
| ATCACGGTAATCCGCCGGAA+GGG | 0.620461 | 1.3:-73409526 | None:intergenic |
| TTTAGGTCACAGTGTAGACA+AGG | 0.621502 | 1.3:+73409367 | MS.gene029611:CDS |
| TACAGTACTCAGTCTTACAC+TGG | 0.624637 | 1.3:+73409146 | MS.gene029611:CDS |
| TTACCGGTGGTGGCAATGTG+AGG | 0.625457 | 1.3:-73409080 | None:intergenic |
| AATCACGGTAATCCGCCGGA+AGG | 0.629594 | 1.3:-73409527 | None:intergenic |
| CTTTGACATGACAGCAACAA+CGG | 0.631924 | 1.3:-73409045 | None:intergenic |
| GTACAGCAGTTCCATAAACA+TGG | 0.632941 | 1.3:-73412179 | None:intergenic |
| AATGCCTTTGGTGACCTCTG+GGG | 0.633442 | 1.3:+73411494 | MS.gene029611:CDS |
| CTTATGTGCAGACAAGAGGT+AGG | 0.635365 | 1.3:+73409327 | MS.gene029611:CDS |
| TAAGATAGCTGTAATTTCTG+GGG | 0.637498 | 1.3:+73412574 | MS.gene029611:CDS |
| AGCCCATCTGCTCTAAACAA+GGG | 0.651856 | 1.3:-73411184 | None:intergenic |
| ATTTGTGTCTACTGCCCTGG+CGG | 0.653081 | 1.3:+73409104 | MS.gene029611:CDS |
| AATCGGAGTCAGGACCGCCA+GGG | 0.654250 | 1.3:-73409118 | None:intergenic |
| CATAGCAAGGATCCTTGCAA+TGG | 0.656475 | 1.3:+73411428 | MS.gene029611:CDS |
| GTATGCGTGCAATTCGAGCA+AGG | 0.657253 | 1.3:+73409183 | MS.gene029611:CDS |
| AACTTGTGGACATCATAGCA+AGG | 0.660784 | 1.3:+73411415 | MS.gene029611:CDS |
| TGTTGGTGTTGAAAGGGACA+TGG | 0.661690 | 1.3:+73411135 | MS.gene029611:CDS |
| TCAACCCCAGAGGTCACCAA+AGG | 0.669888 | 1.3:-73411498 | None:intergenic |
| TTTATGAGATAAGTCGACCA+TGG | 0.671183 | 1.3:-73408856 | None:intergenic |
| TTCTTATGGAGGAGGCTGAG+CGG | 0.675562 | 1.3:+73412525 | MS.gene029611:CDS |
| AACAACGGCTATACCAGATG+CGG | 0.676267 | 1.3:-73409030 | None:intergenic |
| TGGAGTCCAAAGCACTTACG+AGG | 0.676860 | 1.3:+73410626 | MS.gene029611:CDS |
| GCAATGTGAGGGCAACGATG+AGG | 0.677142 | 1.3:-73409068 | None:intergenic |
| TCGTTCGGAGTCTGGTAACG+CGG | 0.679008 | 1.3:-73408967 | None:intergenic |
| GTTACCAGACTCCGAACGAG+AGG | 0.681695 | 1.3:+73408971 | MS.gene029611:CDS |
| GGTTGAGAAAGGGAATCTAA+GGG | 0.683574 | 1.3:+73411515 | MS.gene029611:CDS |
| TACCGGTGGTGGCAATGTGA+GGG | 0.686745 | 1.3:-73409079 | None:intergenic |
| ATTCCCTTTCTCAACCCCAG+AGG | 0.690536 | 1.3:-73411508 | None:intergenic |
| CGCGTGTTTATAGAGTTCAG+CGG | 0.704736 | 1.3:+73411463 | MS.gene029611:CDS |
| GTAGACACAAATGTTACCGG+TGG | 0.711036 | 1.3:-73409093 | None:intergenic |
| CTATAAACACGCGTCCATGG+AGG | 0.720117 | 1.3:-73411453 | None:intergenic |
| GCAGTCGTAACAAACCAACA+AGG | 0.760494 | 1.3:-73412092 | None:intergenic |
| TTCCACGTATTACAAGAGTG+GGG | 0.762155 | 1.3:-73411216 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAAAATCTGAAATAAA+CGG | + | chr1.3:73410081-73410100 | MS.gene029611:intron | 10.0% |
| !!! | TTTTTTAAATGGATTTTTAT+GGG | - | chr1.3:73409904-73409923 | None:intergenic | 10.0% |
| !!! | TTTTTTTAAATGGATTTTTA+TGG | - | chr1.3:73409905-73409924 | None:intergenic | 10.0% |
| !! | TATCATGATGTTATATTAAT+GGG | + | chr1.3:73409449-73409468 | MS.gene029611:intron | 15.0% |
| !! | TTTGTTTACTAGTATTATTT+GGG | + | chr1.3:73411678-73411697 | MS.gene029611:intron | 15.0% |
| !!! | AACAATTTACATTTTAATGA+CGG | - | chr1.3:73409231-73409250 | None:intergenic | 15.0% |
| !!! | AATCTAGAGATATTTTTTTT+AGG | + | chr1.3:73409837-73409856 | MS.gene029611:intron | 15.0% |
| !!! | ATCTAGAGATATTTTTTTTA+GGG | + | chr1.3:73409838-73409857 | MS.gene029611:intron | 15.0% |
| !!! | TAAAAAAATCTGAAATAAAC+GGG | + | chr1.3:73410082-73410101 | MS.gene029611:intron | 15.0% |
| !!! | TATGTTTTTTTTTCTTTCTT+TGG | + | chr1.3:73411068-73411087 | MS.gene029611:intron | 15.0% |
| !! | AAAAAAAACTTCTTTCACAA+GGG | - | chr1.3:73410293-73410312 | None:intergenic | 20.0% |
| !! | AATATTCACATGTTCTTATT+GGG | + | chr1.3:73412286-73412305 | MS.gene029611:intron | 20.0% |
| !! | ACAACAAAAATTTACACTAA+AGG | - | chr1.3:73412016-73412035 | None:intergenic | 20.0% |
| !! | ATCTTCTTGAATATTATACA+TGG | - | chr1.3:73412392-73412411 | None:intergenic | 20.0% |
| !! | ATTAATAAGCAACTTTCTAT+AGG | + | chr1.3:73410937-73410956 | MS.gene029611:intron | 20.0% |
| !! | GTATCATGATGTTATATTAA+TGG | + | chr1.3:73409448-73409467 | MS.gene029611:intron | 20.0% |
| !! | TACAAAGAAATATAGAATGT+CGG | - | chr1.3:73411712-73411731 | None:intergenic | 20.0% |
| !! | TCAACTTGCAAATAATTAAA+TGG | - | chr1.3:73409680-73409699 | None:intergenic | 20.0% |
| !!! | AAAAAAATCTGAAATAAACG+GGG | + | chr1.3:73410083-73410102 | MS.gene029611:intron | 20.0% |
| !!! | ATGTGTTCTATTTTACTTAA+AGG | - | chr1.3:73409266-73409285 | None:intergenic | 20.0% |
| !!! | CTTTGTTTACTAGTATTATT+TGG | + | chr1.3:73411677-73411696 | MS.gene029611:intron | 20.0% |
| !!! | TCTATTTTTTTCCAAAAACA+AGG | - | chr1.3:73409960-73409979 | None:intergenic | 20.0% |
| !!! | TTGTTTGTTAACATCATTTT+AGG | + | chr1.3:73411370-73411389 | MS.gene029611:intron | 20.0% |
| ! | AAAAAAACTTCTTTCACAAG+GGG | - | chr1.3:73410292-73410311 | None:intergenic | 25.0% |
| ! | AATATTCAAGAAGATACCTA+TGG | + | chr1.3:73412397-73412416 | MS.gene029611:intron | 25.0% |
| ! | AATTATTGTTAACAGGGTTA+TGG | + | chr1.3:73412497-73412516 | MS.gene029611:intron | 25.0% |
| ! | ATAAAATTTCAAGACGAGAT+TGG | - | chr1.3:73411629-73411648 | None:intergenic | 25.0% |
| ! | ATGATGATAGACAAAAAGAT+AGG | - | chr1.3:73411879-73411898 | None:intergenic | 25.0% |
| ! | ATTACCGTGATTACTTTATA+AGG | + | chr1.3:73409538-73409557 | MS.gene029611:CDS | 25.0% |
| ! | ATTAGGTATTTCATCATGTA+AGG | - | chr1.3:73412647-73412666 | None:intergenic | 25.0% |
| ! | CATATCAATGATTATATTCG+TGG | + | chr1.3:73410449-73410468 | MS.gene029611:intron | 25.0% |
| ! | CATTATTCATCAGGTTTAAA+AGG | + | chr1.3:73411333-73411352 | MS.gene029611:intron | 25.0% |
| ! | GAAAAAAAACTTCTTTCACA+AGG | - | chr1.3:73410294-73410313 | None:intergenic | 25.0% |
| ! | GAATATTCACATGTTCTTAT+TGG | + | chr1.3:73412285-73412304 | MS.gene029611:intron | 25.0% |
| ! | GACATTCTATATTTCTTTGT+AGG | + | chr1.3:73411711-73411730 | MS.gene029611:intron | 25.0% |
| ! | GACCAAAATTATTGTTAACA+GGG | + | chr1.3:73412491-73412510 | MS.gene029611:intron | 25.0% |
| ! | GATTCCTTATAAAGTAATCA+CGG | - | chr1.3:73409545-73409564 | None:intergenic | 25.0% |
| ! | GCTAAATATTATAGGGAAAA+TGG | + | chr1.3:73410106-73410125 | MS.gene029611:intron | 25.0% |
| ! | GTTTAGTTACATGAATCAAA+TGG | - | chr1.3:73410268-73410287 | None:intergenic | 25.0% |
| ! | TCATTATATTTGTCTAGACA+AGG | + | chr1.3:73410884-73410903 | MS.gene029611:intron | 25.0% |
| ! | TGACCAAAATTATTGTTAAC+AGG | + | chr1.3:73412490-73412509 | MS.gene029611:intron | 25.0% |
| ! | TTTCTATCTCATTATTCATC+AGG | + | chr1.3:73411324-73411343 | MS.gene029611:intron | 25.0% |
| !! | AAAAAATCTGAAATAAACGG+GGG | + | chr1.3:73410084-73410103 | MS.gene029611:intron | 25.0% |
| !! | AACCCTGTTAACAATAATTT+TGG | - | chr1.3:73412496-73412515 | None:intergenic | 25.0% |
| !! | CAGGTTGAGTTTATATTAAT+GGG | + | chr1.3:73409489-73409508 | MS.gene029611:intron | 25.0% |
| !! | CCTAATAGCTTTTCATTTTA+GGG | + | chr1.3:73409997-73410016 | MS.gene029611:intron | 25.0% |
| !! | TCCTAATAGCTTTTCATTTT+AGG | + | chr1.3:73409996-73410015 | MS.gene029611:intron | 25.0% |
| !! | TTTTAAACACATTCAGCATA+AGG | - | chr1.3:73410802-73410821 | None:intergenic | 25.0% |
| !! | TTTTGTCATATGAAGATACA+CGG | + | chr1.3:73411812-73411831 | MS.gene029611:CDS | 25.0% |
| !!! | ATTTTTTTCCAAAAACAAGG+AGG | - | chr1.3:73409957-73409976 | None:intergenic | 25.0% |
| !!! | CAATAATTTTGGTCAAAAGT+AGG | - | chr1.3:73412485-73412504 | None:intergenic | 25.0% |
| !!! | CATATTACTTTCTAGTTGTT+TGG | + | chr1.3:73410960-73410979 | MS.gene029611:intron | 25.0% |
| !!! | CCTTCTTTATTTTGAATCAA+GGG | + | chr1.3:73411968-73411987 | MS.gene029611:intron | 25.0% |
| !!! | CTTCTTTATTTTGAATCAAG+GGG | + | chr1.3:73411969-73411988 | MS.gene029611:intron | 25.0% |
| !!! | CTTTTGTGTAAAGTTTTGAA+TGG | + | chr1.3:73409709-73409728 | MS.gene029611:intron | 25.0% |
| !!! | TATAGGGAAAATGGATTATA+TGG | + | chr1.3:73410115-73410134 | MS.gene029611:intron | 25.0% |
| !!! | TCAGGTTGAGTTTATATTAA+TGG | + | chr1.3:73409488-73409507 | MS.gene029611:intron | 25.0% |
| AACTACACCAGTTTATATCA+TGG | - | chr1.3:73410393-73410412 | None:intergenic | 30.0% | |
| AAGAAATATAGAATGTCGGT+TGG | - | chr1.3:73411708-73411727 | None:intergenic | 30.0% | |
| ACCAAGAAAAACTACAAATC+AGG | + | chr1.3:73410176-73410195 | MS.gene029611:intron | 30.0% | |
| ACCTGTTAACGTTTACTTAA+AGG | - | chr1.3:73410478-73410497 | None:intergenic | 30.0% | |
| ACCTTTAAGTAAACGTTAAC+AGG | + | chr1.3:73410474-73410493 | MS.gene029611:intron | 30.0% | |
| ACTAAGATAGCTGTAATTTC+TGG | + | chr1.3:73412572-73412591 | MS.gene029611:CDS | 30.0% | |
| AGGGACTTTCAAAAAATTCT+CGG | - | chr1.3:73411168-73411187 | None:intergenic | 30.0% | |
| ATTATATGGCAAATGAAGGT+TGG | + | chr1.3:73411782-73411801 | MS.gene029611:CDS | 30.0% | |
| CCCTAAAATGAAAAGCTATT+AGG | - | chr1.3:73410000-73410019 | None:intergenic | 30.0% | |
| CCCTTGATTCAAAATAAAGA+AGG | - | chr1.3:73411971-73411990 | None:intergenic | 30.0% | |
| CGTAACATCAAATTTAGTAC+AGG | - | chr1.3:73410360-73410379 | None:intergenic | 30.0% | |
| CTAAGATAGCTGTAATTTCT+GGG | + | chr1.3:73412573-73412592 | MS.gene029611:CDS | 30.0% | |
| CTTGCAAATAATTAAATGGC+AGG | - | chr1.3:73409676-73409695 | None:intergenic | 30.0% | |
| GTTGAGTTTATATTAATGGG+TGG | + | chr1.3:73409492-73409511 | MS.gene029611:CDS | 30.0% | |
| TAAGATAGCTGTAATTTCTG+GGG | + | chr1.3:73412574-73412593 | MS.gene029611:CDS | 30.0% | |
| TAAGTGCAAAACTTGATAAG+CGG | - | chr1.3:73410527-73410546 | None:intergenic | 30.0% | |
| TACAAATCAGGCTAATAAGA+TGG | + | chr1.3:73410188-73410207 | MS.gene029611:intron | 30.0% | |
| TTATATGGCAAATGAAGGTT+GGG | + | chr1.3:73411783-73411802 | MS.gene029611:CDS | 30.0% | |
| TTTACACTAAAGGTAAGAAC+AGG | - | chr1.3:73412006-73412025 | None:intergenic | 30.0% | |
| ! | ACTTTGTTTGCTTTGGATTT+AGG | + | chr1.3:73409297-73409316 | MS.gene029611:intron | 30.0% |
| ! | ATCCCAATTTTCTGTAGTAA+TGG | - | chr1.3:73412610-73412629 | None:intergenic | 30.0% |
| ! | ATTTGAAAGGGGTACAATTA+GGG | - | chr1.3:73410990-73411009 | None:intergenic | 30.0% |
| ! | CTGAGTACTGTATTCAAAAT+CGG | - | chr1.3:73409138-73409157 | None:intergenic | 30.0% |
| ! | GGTGTAGTTATGATTTTCTA+GGG | + | chr1.3:73410404-73410423 | MS.gene029611:intron | 30.0% |
| ! | GTTTAAAATGTCGTGATGTT+CGG | + | chr1.3:73411568-73411587 | MS.gene029611:CDS | 30.0% |
| ! | GTTTTGCACTTAAATTTCTC+AGG | + | chr1.3:73410535-73410554 | MS.gene029611:intron | 30.0% |
| ! | TATTTGAAAGGGGTACAATT+AGG | - | chr1.3:73410991-73411010 | None:intergenic | 30.0% |
| ! | TGATGTTATATTAATGGGTG+TGG | + | chr1.3:73409454-73409473 | MS.gene029611:intron | 30.0% |
| ! | TGCCTAGTTTGTATTTGAAA+GGG | - | chr1.3:73411002-73411021 | None:intergenic | 30.0% |
| ! | TGGTGTAGTTATGATTTTCT+AGG | + | chr1.3:73410403-73410422 | MS.gene029611:intron | 30.0% |
| ! | TTGTTGTTGTTGATGAAACA+TGG | + | chr1.3:73412029-73412048 | MS.gene029611:intron | 30.0% |
| !! | AATGGATTTTTATGGGTTGT+AGG | - | chr1.3:73409897-73409916 | None:intergenic | 30.0% |
| !! | ATTGGTTCTAGATAATTACC+TGG | - | chr1.3:73411611-73411630 | None:intergenic | 30.0% |
| !!! | GCCTTCTTTATTTTGAATCA+AGG | + | chr1.3:73411967-73411986 | MS.gene029611:intron | 30.0% |
| !!! | TTGTGTAAAGTTTTGAATGG+AGG | + | chr1.3:73409712-73409731 | MS.gene029611:intron | 30.0% |
| AAACGGGGGCTAAATATTAT+AGG | + | chr1.3:73410098-73410117 | MS.gene029611:intron | 35.0% | |
| AAATTGGGATATGAGCTTGA+AGG | + | chr1.3:73412620-73412639 | MS.gene029611:CDS | 35.0% | |
| AACGGGGGCTAAATATTATA+GGG | + | chr1.3:73410099-73410118 | MS.gene029611:intron | 35.0% | |
| AAGAACGCATCACATTAGAT+AGG | - | chr1.3:73411276-73411295 | None:intergenic | 35.0% | |
| AAGATAGGCACTAATAAGAG+AGG | - | chr1.3:73411864-73411883 | None:intergenic | 35.0% | |
| AAGTGCATGAAATATACGTG+CGG | + | chr1.3:73409423-73409442 | MS.gene029611:intron | 35.0% | |
| AATCTTCATGATGCTTTGTC+TGG | + | chr1.3:73409561-73409580 | MS.gene029611:CDS | 35.0% | |
| AATTGGGATATGAGCTTGAA+GGG | + | chr1.3:73412621-73412640 | MS.gene029611:CDS | 35.0% | |
| AATTGTCATGCCAATACACT+TGG | - | chr1.3:73409640-73409659 | None:intergenic | 35.0% | |
| ACAGTAACAAACCTTGAAAC+CGG | - | chr1.3:73410724-73410743 | None:intergenic | 35.0% | |
| ACCCCTTTCAAATACAAACT+AGG | + | chr1.3:73410997-73411016 | MS.gene029611:intron | 35.0% | |
| ACGCCATTACTACAGAAAAT+TGG | + | chr1.3:73412604-73412623 | MS.gene029611:CDS | 35.0% | |
| ACTGTCTCCATGATATAAAC+TGG | + | chr1.3:73410383-73410402 | MS.gene029611:intron | 35.0% | |
| ACTTGTTCGTCGTGATTATA+TGG | + | chr1.3:73411768-73411787 | MS.gene029611:CDS | 35.0% | |
| ATATGGGAGAATAGTTTGAC+AGG | - | chr1.3:73410776-73410795 | None:intergenic | 35.0% | |
| ATTGATCAGCTTAAGCGTTT+AGG | + | chr1.3:73409350-73409369 | MS.gene029611:CDS | 35.0% | |
| CAAGCTTCAGATAGATTCAT+TGG | + | chr1.3:73410908-73410927 | MS.gene029611:intron | 35.0% | |
| CGCCATTACTACAGAAAATT+GGG | + | chr1.3:73412605-73412624 | MS.gene029611:CDS | 35.0% | |
| CGTGATTATATGGCAAATGA+AGG | + | chr1.3:73411778-73411797 | MS.gene029611:CDS | 35.0% | |
| CTTATTGGATACTATCTGAG+TGG | + | chr1.3:73412323-73412342 | MS.gene029611:intron | 35.0% | |
| GCAATCATCTCAACAAGTTT+GGG | - | chr1.3:73408948-73408967 | None:intergenic | 35.0% | |
| TACAATGAGGGACATGTTAT+TGG | - | chr1.3:73412452-73412471 | None:intergenic | 35.0% | |
| TCAAATACAAACTAGGCAGT+AGG | + | chr1.3:73411004-73411023 | MS.gene029611:intron | 35.0% | |
| TCACCAAATTAAACCAGAAG+AGG | + | chr1.3:73411741-73411760 | MS.gene029611:CDS | 35.0% | |
| TGATTCACAAGAAGACATTG+CGG | + | chr1.3:73410240-73410259 | MS.gene029611:intron | 35.0% | |
| TTCATTACAACTTTGAGTGC+AGG | - | chr1.3:73410842-73410861 | None:intergenic | 35.0% | |
| TTGCACTTAAATTTCTCAGG+AGG | + | chr1.3:73410538-73410557 | MS.gene029611:intron | 35.0% | |
| TTGGTCAAAAGTAGGTCAAT+TGG | - | chr1.3:73412477-73412496 | None:intergenic | 35.0% | |
| TTTATGAGATAAGTCGACCA+TGG | - | chr1.3:73408859-73408878 | None:intergenic | 35.0% | |
| ! | ATGGTCGACTTATCTCATAA+AGG | + | chr1.3:73408858-73408877 | MS.gene029611:CDS | 35.0% |
| ! | ATTAGCATGACAGTTTTACC+TGG | - | chr1.3:73412239-73412258 | None:intergenic | 35.0% |
| ! | ATTCAGCATAAGGAGCATAT+GGG | - | chr1.3:73410792-73410811 | None:intergenic | 35.0% |
| ! | CTGCCTAGTTTGTATTTGAA+AGG | - | chr1.3:73411003-73411022 | None:intergenic | 35.0% |
| ! | GCCTAGTTTGTATTTGAAAG+GGG | - | chr1.3:73411001-73411020 | None:intergenic | 35.0% |
| ! | TCAGGCTAATAAGATGGATT+TGG | + | chr1.3:73410194-73410213 | MS.gene029611:intron | 35.0% |
| ! | TTCGATGACTTTGTTTGCTT+TGG | + | chr1.3:73409290-73409309 | MS.gene029611:intron | 35.0% |
| ! | TTTTGGTATTTGGACATGTG+AGG | + | chr1.3:73409748-73409767 | MS.gene029611:intron | 35.0% |
| !! | GCCTGATTTGTAGTTTTTCT+TGG | - | chr1.3:73410180-73410199 | None:intergenic | 35.0% |
| !! | GCTTTGGACTTTTTGGTATT+TGG | + | chr1.3:73409738-73409757 | MS.gene029611:intron | 35.0% |
| !! | GGTGTGGTTTATTGTTTTTC+AGG | + | chr1.3:73409470-73409489 | MS.gene029611:intron | 35.0% |
| !! | TCCAAATGTTGGTGTTGAAA+GGG | + | chr1.3:73411129-73411148 | MS.gene029611:CDS | 35.0% |
| !! | TTCCAAATGTTGGTGTTGAA+AGG | + | chr1.3:73411128-73411147 | MS.gene029611:CDS | 35.0% |
| !!! | ATGTGTTACCTCCTTGTTTT+TGG | + | chr1.3:73409946-73409965 | MS.gene029611:intron | 35.0% |
| !!! | CTTTCTTTGGCTTTTGCTTT+AGG | + | chr1.3:73411081-73411100 | MS.gene029611:intron | 35.0% |
| AACTTGTGGACATCATAGCA+AGG | + | chr1.3:73411415-73411434 | MS.gene029611:CDS | 40.0% | |
| ACACCAACATTTGGAAGATC+AGG | - | chr1.3:73411124-73411143 | None:intergenic | 40.0% | |
| ACTACTTGTCCAGAGCTTAT+GGG | + | chr1.3:73412132-73412151 | MS.gene029611:CDS | 40.0% | |
| ACTCTTGTAATACGTGGAAC+TGG | + | chr1.3:73411220-73411239 | MS.gene029611:CDS | 40.0% | |
| AGGTCAATTGGAGTACAATG+AGG | - | chr1.3:73412465-73412484 | None:intergenic | 40.0% | |
| AGTTCCACGTATTACAAGAG+TGG | - | chr1.3:73411221-73411240 | None:intergenic | 40.0% | |
| ATACAAACTAGGCAGTAGGT+TGG | + | chr1.3:73411008-73411027 | MS.gene029611:intron | 40.0% | |
| ATGAAACATGGCCATGACAT+TGG | + | chr1.3:73412041-73412060 | MS.gene029611:intron | 40.0% | |
| ATGCCTGATCTTCCAAATGT+TGG | + | chr1.3:73411118-73411137 | MS.gene029611:CDS | 40.0% | |
| ATTAGCTCGAATGGAAGACT+TGG | + | chr1.3:73411545-73411564 | MS.gene029611:CDS | 40.0% | |
| CATAGTGCAACCAAGTGTAT+TGG | + | chr1.3:73409627-73409646 | MS.gene029611:CDS | 40.0% | |
| CCAAATTAAACCAGAAGAGG+TGG | + | chr1.3:73411744-73411763 | MS.gene029611:CDS | 40.0% | |
| CTCTTGTAATACGTGGAACT+GGG | + | chr1.3:73411221-73411240 | MS.gene029611:CDS | 40.0% | |
| CTGCGACAAATGCTTTCTTA+CGG | + | chr1.3:73410585-73410604 | MS.gene029611:CDS | 40.0% | |
| CTGTATTCAAAATCGGAGTC+AGG | - | chr1.3:73409131-73409150 | None:intergenic | 40.0% | |
| CTTTGACATGACAGCAACAA+CGG | - | chr1.3:73409048-73409067 | None:intergenic | 40.0% | |
| GAAGGCAAAATATGCACAAC+AGG | - | chr1.3:73411953-73411972 | None:intergenic | 40.0% | |
| GCAGTAGACACAAATGTTAC+CGG | - | chr1.3:73409099-73409118 | None:intergenic | 40.0% | |
| GCTGCATTGTGAATATCCAT+AGG | - | chr1.3:73412416-73412435 | None:intergenic | 40.0% | |
| GGACATGTTATTGGTATCCT+TGG | - | chr1.3:73412443-73412462 | None:intergenic | 40.0% | |
| GGAGTTTACAATCTCTGCAA+TGG | - | chr1.3:73408838-73408857 | None:intergenic | 40.0% | |
| GGCAATCATCTCAACAAGTT+TGG | - | chr1.3:73408949-73408968 | None:intergenic | 40.0% | |
| GGTCAATTGGAGTACAATGA+GGG | - | chr1.3:73412464-73412483 | None:intergenic | 40.0% | |
| GGTTGAGAAAGGGAATCTAA+GGG | + | chr1.3:73411515-73411534 | MS.gene029611:CDS | 40.0% | |
| GTACAGCAGTTCCATAAACA+TGG | - | chr1.3:73412182-73412201 | None:intergenic | 40.0% | |
| GTGACAAAGTGCAGATTGAT+AGG | - | chr1.3:73410747-73410766 | None:intergenic | 40.0% | |
| GTTCCACGTATTACAAGAGT+GGG | - | chr1.3:73411220-73411239 | None:intergenic | 40.0% | |
| TACAGTACTCAGTCTTACAC+TGG | + | chr1.3:73409146-73409165 | MS.gene029611:CDS | 40.0% | |
| TACCTCTTGTCTGCACATAA+GGG | - | chr1.3:73409328-73409347 | None:intergenic | 40.0% | |
| TCCCTTTCAACACCAACATT+TGG | - | chr1.3:73411133-73411152 | None:intergenic | 40.0% | |
| TGCAGAGATTGTAAACTCCA+TGG | + | chr1.3:73408839-73408858 | MS.gene029611:CDS | 40.0% | |
| TGTTTATGGAACTGCTGTAC+CGG | + | chr1.3:73412182-73412201 | MS.gene029611:CDS | 40.0% | |
| TTAGCTCGAATGGAAGACTT+GGG | + | chr1.3:73411546-73411565 | MS.gene029611:CDS | 40.0% | |
| TTATGGTACGCTTCTTATGG+AGG | + | chr1.3:73412514-73412533 | MS.gene029611:CDS | 40.0% | |
| TTCATCAGGTTTAAAAGGCG+TGG | + | chr1.3:73411338-73411357 | MS.gene029611:intron | 40.0% | |
| TTCCACGTATTACAAGAGTG+GGG | - | chr1.3:73411219-73411238 | None:intergenic | 40.0% | |
| TTCTTACGGTTGTACACGAT+TGG | + | chr1.3:73410599-73410618 | MS.gene029611:CDS | 40.0% | |
| TTGTTACGACTGCGAAAATG+TGG | + | chr1.3:73412102-73412121 | MS.gene029611:CDS | 40.0% | |
| TTTAGGTCACAGTGTAGACA+AGG | + | chr1.3:73409367-73409386 | MS.gene029611:CDS | 40.0% | |
| ! | CATTCAGCATAAGGAGCATA+TGG | - | chr1.3:73410793-73410812 | None:intergenic | 40.0% |
| ! | TGAGTGGAATTGCTGAGTTT+TGG | + | chr1.3:73412339-73412358 | MS.gene029611:intron | 40.0% |
| ! | TTCACAATGCAGCTTTTCCA+AGG | + | chr1.3:73412423-73412442 | MS.gene029611:intron | 40.0% |
| !! | ATAGCTGTAATTTCTGGGGT+TGG | + | chr1.3:73412578-73412597 | MS.gene029611:CDS | 40.0% |
| !! | CCACCTCTTCTGGTTTAATT+TGG | - | chr1.3:73411747-73411766 | None:intergenic | 40.0% |
| !! | CTTTATGAGCTCTGGAAAAC+TGG | + | chr1.3:73411244-73411263 | MS.gene029611:CDS | 40.0% |
| !! | GAGCATTGAGATCAACTTTG+TGG | - | chr1.3:73408884-73408903 | None:intergenic | 40.0% |
| !!! | TGTAGCTGATTGTTTTTGCC+TGG | + | chr1.3:73410689-73410708 | MS.gene029611:CDS | 40.0% |
| !!! | TTTTGAATGGAGGAGTGCTT+TGG | + | chr1.3:73409722-73409741 | MS.gene029611:intron | 40.0% |
| AACAACGGCTATACCAGATG+CGG | - | chr1.3:73409033-73409052 | None:intergenic | 45.0% | |
| AACATTTGTGTCTACTGCCC+TGG | + | chr1.3:73409101-73409120 | MS.gene029611:CDS | 45.0% | |
| AACCCTTATGTGCAGACAAG+AGG | + | chr1.3:73409323-73409342 | MS.gene029611:CDS | 45.0% | |
| AAGTAATCACGGTAATCCGC+CGG | - | chr1.3:73409534-73409553 | None:intergenic | 45.0% | |
| ACTCTATAAACACGCGTCCA+TGG | - | chr1.3:73411459-73411478 | None:intergenic | 45.0% | |
| AGACAGCACAACCAATGTCA+TGG | - | chr1.3:73412055-73412074 | None:intergenic | 45.0% | |
| AGGAGGCCAGATTATTGTCT+TGG | + | chr1.3:73410555-73410574 | MS.gene029611:intron | 45.0% | |
| ATGATGTCCACAAGTTGCTC+AGG | - | chr1.3:73411411-73411430 | None:intergenic | 45.0% | |
| CAACATCCTCGTAAGTGCTT+TGG | - | chr1.3:73410635-73410654 | None:intergenic | 45.0% | |
| CACTACTTGTCCAGAGCTTA+TGG | + | chr1.3:73412131-73412150 | MS.gene029611:CDS | 45.0% | |
| CATAGCAAGGATCCTTGCAA+TGG | + | chr1.3:73411428-73411447 | MS.gene029611:CDS | 45.0% | |
| CGCGTGTTTATAGAGTTCAG+CGG | + | chr1.3:73411463-73411482 | MS.gene029611:CDS | 45.0% | |
| CTACCTCTTGTCTGCACATA+AGG | - | chr1.3:73409329-73409348 | None:intergenic | 45.0% | |
| CTTATGTGCAGACAAGAGGT+AGG | + | chr1.3:73409327-73409346 | MS.gene029611:CDS | 45.0% | |
| CTTGAGCAGGATATCCTTGT+TGG | + | chr1.3:73412078-73412097 | MS.gene029611:intron | 45.0% | |
| GAACACTTACCCATAAGCTC+TGG | - | chr1.3:73412144-73412163 | None:intergenic | 45.0% | |
| GCAGTCGTAACAAACCAACA+AGG | - | chr1.3:73412095-73412114 | None:intergenic | 45.0% | |
| GCGTGTTTATAGAGTTCAGC+GGG | + | chr1.3:73411464-73411483 | MS.gene029611:CDS | 45.0% | |
| GGAGGCCAGATTATTGTCTT+GGG | + | chr1.3:73410556-73410575 | MS.gene029611:intron | 45.0% | |
| GGAGTTAGCATTAGCTCGAA+TGG | + | chr1.3:73411536-73411555 | MS.gene029611:CDS | 45.0% | |
| GGGTTATGGTACGCTTCTTA+TGG | + | chr1.3:73412511-73412530 | MS.gene029611:intron | 45.0% | |
| GGGTTGAGAAAGGGAATCTA+AGG | + | chr1.3:73411514-73411533 | MS.gene029611:CDS | 45.0% | |
| GGTTGTACACGATTGGAGAT+TGG | + | chr1.3:73410606-73410625 | MS.gene029611:CDS | 45.0% | |
| GTAGACACAAATGTTACCGG+TGG | - | chr1.3:73409096-73409115 | None:intergenic | 45.0% | |
| GTCACAGTGTAGACAAGGTT+TGG | + | chr1.3:73409372-73409391 | MS.gene029611:intron | 45.0% | |
| GTCATATGAAGATACACGGC+AGG | + | chr1.3:73411816-73411835 | MS.gene029611:CDS | 45.0% | |
| GTTCGTGAGCTCCATGTTTA+TGG | + | chr1.3:73412168-73412187 | MS.gene029611:CDS | 45.0% | |
| GTTGCTCGTGACACTAATAG+AGG | + | chr1.3:73410651-73410670 | MS.gene029611:CDS | 45.0% | |
| TAAGAGAGGCTGAGGAAAGA+AGG | - | chr1.3:73411850-73411869 | None:intergenic | 45.0% | |
| TACCCCACTCTTGTAATACG+TGG | + | chr1.3:73411214-73411233 | MS.gene029611:CDS | 45.0% | |
| TGAGGAGAAGACTTGTAGCA+AGG | + | chr1.3:73409766-73409785 | MS.gene029611:intron | 45.0% | |
| TGAGGCCCAAGACAATAATC+TGG | - | chr1.3:73410564-73410583 | None:intergenic | 45.0% | |
| TGGAACTTTCATGTCCCTTC+CGG | + | chr1.3:73409512-73409531 | MS.gene029611:CDS | 45.0% | |
| TTATCCACCTGAGCAACTTG+TGG | + | chr1.3:73411401-73411420 | MS.gene029611:CDS | 45.0% | |
| TTCTGACAAGCTACAACACC+AGG | + | chr1.3:73412218-73412237 | MS.gene029611:CDS | 45.0% | |
| ! | AAGCCCATCTGCTCTAAACA+AGG | - | chr1.3:73411188-73411207 | None:intergenic | 45.0% |
| ! | AGCCCATCTGCTCTAAACAA+GGG | - | chr1.3:73411187-73411206 | None:intergenic | 45.0% |
| ! | AGTCCCTTGTTTAGAGCAGA+TGG | + | chr1.3:73411181-73411200 | MS.gene029611:CDS | 45.0% |
| ! | GCTCTGGACAAGTAGTGTTA+CGG | - | chr1.3:73412128-73412147 | None:intergenic | 45.0% |
| ! | GTCCCTTGTTTAGAGCAGAT+GGG | + | chr1.3:73411182-73411201 | MS.gene029611:CDS | 45.0% |
| ! | GTGTGAGTCTAGTTTGTAGC+TGG | + | chr1.3:73411919-73411938 | MS.gene029611:intron | 45.0% |
| !! | CGTAAGAAAGCATTTGTCGC+AGG | - | chr1.3:73410587-73410606 | None:intergenic | 45.0% |
| !! | TGTTGGTGTTGAAAGGGACA+TGG | + | chr1.3:73411135-73411154 | MS.gene029611:CDS | 45.0% |
| !!! | GAGGAGTGCTTTGGACTTTT+TGG | + | chr1.3:73409731-73409750 | MS.gene029611:intron | 45.0% |
| !!! | AACTTTTTTTTTTTTTTAAA+TGG | - | chr1.3:73409915-73409934 | None:intergenic | 5.0% |
| AACTTTCATGTCCCTTCCGG+CGG | + | chr1.3:73409515-73409534 | MS.gene029611:CDS | 50.0% | |
| ATGTCCACAAGTTGCTCAGG+TGG | - | chr1.3:73411408-73411427 | None:intergenic | 50.0% | |
| ATTCCCTTTCTCAACCCCAG+AGG | - | chr1.3:73411511-73411530 | None:intergenic | 50.0% | |
| ATTTGTGTCTACTGCCCTGG+CGG | + | chr1.3:73409104-73409123 | MS.gene029611:CDS | 50.0% | |
| CACCTCTGCCAATGTAGAAG+AGG | + | chr1.3:73409587-73409606 | MS.gene029611:CDS | 50.0% | |
| CACGTGAGAGGCCATACTTA+CGG | - | chr1.3:73408923-73408942 | None:intergenic | 50.0% | |
| CGAACAAGTTCCACCTCTTC+TGG | - | chr1.3:73411757-73411776 | None:intergenic | 50.0% | |
| CGAATTGCACGCATACTGGT+AGG | - | chr1.3:73409179-73409198 | None:intergenic | 50.0% | |
| CGCGTGCTTCTTCTTCACTA+AGG | - | chr1.3:73408809-73408828 | None:intergenic | 50.0% | |
| CTATAAACACGCGTCCATGG+AGG | - | chr1.3:73411456-73411475 | None:intergenic | 50.0% | |
| CTCTGCCAATGTAGAAGAGG+CGG | + | chr1.3:73409590-73409609 | MS.gene029611:CDS | 50.0% | |
| CTTCTTCTTCACTAAGGCCG+TGG | - | chr1.3:73408803-73408822 | None:intergenic | 50.0% | |
| GACACAAATGTTACCGGTGG+TGG | - | chr1.3:73409093-73409112 | None:intergenic | 50.0% | |
| GCGGGATATTCCAATGCCTT+TGG | + | chr1.3:73411482-73411501 | MS.gene029611:CDS | 50.0% | |
| GGCACTAATAAGAGAGGCTG+AGG | - | chr1.3:73411858-73411877 | None:intergenic | 50.0% | |
| GGGAAGAAGAACCTCTCGTT+CGG | - | chr1.3:73408985-73409004 | None:intergenic | 50.0% | |
| GTATGCGTGCAATTCGAGCA+AGG | + | chr1.3:73409183-73409202 | MS.gene029611:CDS | 50.0% | |
| TACCTGGATTCCAGCTTCTC+TGG | - | chr1.3:73411595-73411614 | None:intergenic | 50.0% | |
| TCCTTGCAATGGTACCTCCA+TGG | + | chr1.3:73411439-73411458 | MS.gene029611:CDS | 50.0% | |
| TGCTCGAATTGCACGCATAC+TGG | - | chr1.3:73409183-73409202 | None:intergenic | 50.0% | |
| TGGTACGCTTCTTATGGAGG+AGG | + | chr1.3:73412517-73412536 | MS.gene029611:CDS | 50.0% | |
| TGTGCTGTCTTCTCTTGAGC+AGG | + | chr1.3:73412065-73412084 | MS.gene029611:intron | 50.0% | |
| TTCTTATGGAGGAGGCTGAG+CGG | + | chr1.3:73412525-73412544 | MS.gene029611:CDS | 50.0% | |
| ! | AATGCCTTTGGTGACCTCTG+GGG | + | chr1.3:73411494-73411513 | MS.gene029611:CDS | 50.0% |
| ! | CAATGCCTTTGGTGACCTCT+GGG | + | chr1.3:73411493-73411512 | MS.gene029611:CDS | 50.0% |
| ! | GAACTGGGCTTTATGAGCTC+TGG | + | chr1.3:73411236-73411255 | MS.gene029611:CDS | 50.0% |
| ! | GTCTAGTTTGTAGCTGGCAC+TGG | + | chr1.3:73411925-73411944 | MS.gene029611:intron | 50.0% |
| ! | TGGAGTCCAAAGCACTTACG+AGG | + | chr1.3:73410626-73410645 | MS.gene029611:CDS | 50.0% |
| ! | TTTTGCCTGGCTAAAGACGC+CGG | + | chr1.3:73410702-73410721 | MS.gene029611:CDS | 50.0% |
| !! | AAAGGAGGCTTTGAAGGCCA+CGG | + | chr1.3:73408783-73408802 | MS.gene029611:CDS | 50.0% |
| !! | AATGGTGGCGGAGGCAAAAA+AGG | + | chr1.3:73408746-73408765 | MS.gene029611:CDS | 50.0% |
| !! | ACAGGTTTGGCTCGGAGTTT+GGG | - | chr1.3:73409005-73409024 | None:intergenic | 50.0% |
| !! | ATGAGCTCTGGAAAACTGGC+AGG | + | chr1.3:73411248-73411267 | MS.gene029611:CDS | 50.0% |
| !! | CAAAAAAGGCACCACGTCCT+GGG | + | chr1.3:73408760-73408779 | MS.gene029611:CDS | 50.0% |
| !! | GAAAGCATTTGTCGCAGGTG+AGG | - | chr1.3:73410582-73410601 | None:intergenic | 50.0% |
| !! | GAACTGCTGTACCGGTTCAT+GGG | + | chr1.3:73412190-73412209 | MS.gene029611:CDS | 50.0% |
| !! | TCCATGGAGGTACCATTGCA+AGG | - | chr1.3:73411443-73411462 | None:intergenic | 50.0% |
| !! | TGACCTCTGGGGTTGAGAAA+GGG | + | chr1.3:73411505-73411524 | MS.gene029611:CDS | 50.0% |
| AAACCTGTCCGAACCGCATC+TGG | + | chr1.3:73409017-73409036 | MS.gene029611:CDS | 55.0% | |
| AATCACGGTAATCCGCCGGA+AGG | - | chr1.3:73409530-73409549 | None:intergenic | 55.0% | |
| AGAACCTCTCGTTCGGAGTC+TGG | - | chr1.3:73408978-73408997 | None:intergenic | 55.0% | |
| ATCACGGTAATCCGCCGGAA+GGG | - | chr1.3:73409529-73409548 | None:intergenic | 55.0% | |
| CAAGTTTGGGTGCACGTGAG+AGG | - | chr1.3:73408935-73408954 | None:intergenic | 55.0% | |
| CCTTCAAAGCCTCCTTTCCC+AGG | - | chr1.3:73408780-73408799 | None:intergenic | 55.0% | |
| CGCCTCTTCTACATTGGCAG+AGG | - | chr1.3:73409592-73409611 | None:intergenic | 55.0% | |
| CGGCTATACCAGATGCGGTT+CGG | - | chr1.3:73409028-73409047 | None:intergenic | 55.0% | |
| CGTCACCGCCTCTTCTACAT+TGG | - | chr1.3:73409598-73409617 | None:intergenic | 55.0% | |
| GACCAGAGAAGCTGGAATCC+AGG | + | chr1.3:73411590-73411609 | MS.gene029611:CDS | 55.0% | |
| GATGTTCGGACCAGAGAAGC+TGG | + | chr1.3:73411582-73411601 | MS.gene029611:CDS | 55.0% | |
| GCAATGTGAGGGCAACGATG+AGG | - | chr1.3:73409071-73409090 | None:intergenic | 55.0% | |
| GCGTGCAATTCGAGCAAGGT+AGG | + | chr1.3:73409187-73409206 | MS.gene029611:intron | 55.0% | |
| GTTACCAGACTCCGAACGAG+AGG | + | chr1.3:73408971-73408990 | MS.gene029611:CDS | 55.0% | |
| TCAACCCCAGAGGTCACCAA+AGG | - | chr1.3:73411501-73411520 | None:intergenic | 55.0% | |
| TCAGAATCCCGCCCATGAAC+CGG | - | chr1.3:73412204-73412223 | None:intergenic | 55.0% | |
| TCTGCTGCGTGCCGTAAGTA+TGG | + | chr1.3:73408909-73408928 | MS.gene029611:CDS | 55.0% | |
| TGAAACCGGCGTCTTTAGCC+AGG | - | chr1.3:73410710-73410729 | None:intergenic | 55.0% | |
| ! | AGATGCGGTTCGGACAGGTT+TGG | - | chr1.3:73409018-73409037 | None:intergenic | 55.0% |
| ! | ATACCAGATGCGGTTCGGAC+AGG | - | chr1.3:73409023-73409042 | None:intergenic | 55.0% |
| ! | CCAATGCCTTTGGTGACCTC+TGG | + | chr1.3:73411492-73411511 | MS.gene029611:CDS | 55.0% |
| ! | CCAGAGGTCACCAAAGGCAT+TGG | - | chr1.3:73411495-73411514 | None:intergenic | 55.0% |
| ! | CCTGGGAAAGGAGGCTTTGA+AGG | + | chr1.3:73408777-73408796 | MS.gene029611:CDS | 55.0% |
| ! | TACCGGTGGTGGCAATGTGA+GGG | - | chr1.3:73409082-73409101 | None:intergenic | 55.0% |
| ! | TCGTTCGGAGTCTGGTAACG+CGG | - | chr1.3:73408970-73408989 | None:intergenic | 55.0% |
| ! | TTACCGGTGGTGGCAATGTG+AGG | - | chr1.3:73409083-73409102 | None:intergenic | 55.0% |
| !! | GACAGGTTTGGCTCGGAGTT+TGG | - | chr1.3:73409006-73409025 | None:intergenic | 55.0% |
| !! | GCAAAAAAGGCACCACGTCC+TGG | + | chr1.3:73408759-73408778 | MS.gene029611:CDS | 55.0% |
| !! | GGAACTGCTGTACCGGTTCA+TGG | + | chr1.3:73412189-73412208 | MS.gene029611:CDS | 55.0% |
| !! | GGCTAAAGACGCCGGTTTCA+AGG | + | chr1.3:73410710-73410729 | MS.gene029611:CDS | 55.0% |
| !! | GTGACCTCTGGGGTTGAGAA+AGG | + | chr1.3:73411504-73411523 | MS.gene029611:CDS | 55.0% |
| AAATCGGAGTCAGGACCGCC+AGG | - | chr1.3:73409122-73409141 | None:intergenic | 60.0% | |
| AAGCCTCCTTTCCCAGGACG+TGG | - | chr1.3:73408774-73408793 | None:intergenic | 60.0% | |
| AATCGGAGTCAGGACCGCCA+GGG | - | chr1.3:73409121-73409140 | None:intergenic | 60.0% | |
| TGCCCTCACATTGCCACCAC+CGG | + | chr1.3:73409077-73409096 | MS.gene029611:CDS | 60.0% | |
| ! | AAGGCACCACGTCCTGGGAA+AGG | + | chr1.3:73408765-73408784 | MS.gene029611:CDS | 60.0% |
| ! | CGGTTCGGACAGGTTTGGCT+CGG | - | chr1.3:73409013-73409032 | None:intergenic | 60.0% |
| !! | CTGCTGTACCGGTTCATGGG+CGG | + | chr1.3:73412193-73412212 | MS.gene029611:CDS | 60.0% |
| !! | TGCTGTACCGGTTCATGGGC+GGG | + | chr1.3:73412194-73412213 | MS.gene029611:CDS | 60.0% |
| GCACCACGTCCTGGGAAAGG+AGG | + | chr1.3:73408768-73408787 | MS.gene029611:CDS | 65.0% | |
| !! | GGCAGCTGCAATGGTGGCGG+AGG | + | chr1.3:73408737-73408756 | MS.gene029611:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 73408735 | 73412670 | 73408735 | ID=MS.gene029611 |
| chr1.3 | mRNA | 73408735 | 73412670 | 73408735 | ID=MS.gene029611.t1;Parent=MS.gene029611 |
| chr1.3 | exon | 73408735 | 73409204 | 73408735 | ID=MS.gene029611.t1.exon1;Parent=MS.gene029611.t1 |
| chr1.3 | CDS | 73408735 | 73409204 | 73408735 | ID=cds.MS.gene029611.t1;Parent=MS.gene029611.t1 |
| chr1.3 | exon | 73409319 | 73409388 | 73409319 | ID=MS.gene029611.t1.exon2;Parent=MS.gene029611.t1 |
| chr1.3 | CDS | 73409319 | 73409388 | 73409319 | ID=cds.MS.gene029611.t1;Parent=MS.gene029611.t1 |
| chr1.3 | exon | 73409492 | 73409664 | 73409492 | ID=MS.gene029611.t1.exon3;Parent=MS.gene029611.t1 |
| chr1.3 | CDS | 73409492 | 73409664 | 73409492 | ID=cds.MS.gene029611.t1;Parent=MS.gene029611.t1 |
| chr1.3 | exon | 73410557 | 73410731 | 73410557 | ID=MS.gene029611.t1.exon4;Parent=MS.gene029611.t1 |
| chr1.3 | CDS | 73410557 | 73410731 | 73410557 | ID=cds.MS.gene029611.t1;Parent=MS.gene029611.t1 |
| chr1.3 | exon | 73411103 | 73411269 | 73411103 | ID=MS.gene029611.t1.exon5;Parent=MS.gene029611.t1 |
| chr1.3 | CDS | 73411103 | 73411269 | 73411103 | ID=cds.MS.gene029611.t1;Parent=MS.gene029611.t1 |
| chr1.3 | exon | 73411392 | 73411611 | 73411392 | ID=MS.gene029611.t1.exon6;Parent=MS.gene029611.t1 |
| chr1.3 | CDS | 73411392 | 73411611 | 73411392 | ID=cds.MS.gene029611.t1;Parent=MS.gene029611.t1 |
| chr1.3 | exon | 73411733 | 73411837 | 73411733 | ID=MS.gene029611.t1.exon7;Parent=MS.gene029611.t1 |
| chr1.3 | CDS | 73411733 | 73411837 | 73411733 | ID=cds.MS.gene029611.t1;Parent=MS.gene029611.t1 |
| chr1.3 | exon | 73412087 | 73412239 | 73412087 | ID=MS.gene029611.t1.exon8;Parent=MS.gene029611.t1 |
| chr1.3 | CDS | 73412087 | 73412239 | 73412087 | ID=cds.MS.gene029611.t1;Parent=MS.gene029611.t1 |
| chr1.3 | exon | 73412512 | 73412670 | 73412512 | ID=MS.gene029611.t1.exon9;Parent=MS.gene029611.t1 |
| chr1.3 | CDS | 73412512 | 73412670 | 73412512 | ID=cds.MS.gene029611.t1;Parent=MS.gene029611.t1 |
| Gene Sequence |
| Protein sequence |
