AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene020313


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020313.t1 MTR_7g096040 95.756 542 22 1 1 541 1 542 0.0 987
MS.gene020313.t1 MTR_8g062330 78.960 404 80 4 143 541 44 447 0.0 652
MS.gene020313.t1 MTR_2g018270 40.860 93 52 2 439 529 85 176 1.89e-13 73.2
MS.gene020313.t1 MTR_3g115560 43.662 71 39 1 453 523 144 213 6.80e-13 71.6
MS.gene020313.t1 MTR_3g115560 43.662 71 39 1 453 523 30 99 7.92e-13 71.2
MS.gene020313.t1 MTR_8g005100 41.667 84 47 2 453 536 98 179 2.35e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020313.t1 AT3G54610 71.226 563 138 7 3 541 6 568 0.0 759
MS.gene020313.t1 AT1G76380 47.761 67 34 1 453 519 166 231 2.84e-13 72.8
MS.gene020313.t1 AT1G76380 47.761 67 34 1 453 519 165 230 2.97e-13 72.8
MS.gene020313.t1 AT5G63320 37.113 97 58 2 439 533 167 262 1.99e-12 70.1
MS.gene020313.t1 AT5G63320 37.113 97 58 2 439 533 167 262 1.99e-12 70.1
MS.gene020313.t1 AT1G76380 46.269 67 35 1 453 519 165 230 2.40e-12 70.1
MS.gene020313.t1 AT5G63320 37.113 97 58 2 439 533 167 262 7.22e-12 68.9
MS.gene020313.t1 AT1G20670 42.254 71 40 1 453 523 196 265 8.91e-12 68.2
MS.gene020313.t1 AT3G27260 35.088 114 69 3 402 511 143 255 3.51e-11 66.6
MS.gene020313.t1 AT3G27260 35.088 114 69 3 402 511 143 255 3.92e-11 66.2
MS.gene020313.t1 AT3G27260 35.088 114 69 3 402 511 143 255 4.36e-11 66.2
MS.gene020313.t1 AT3G27260 35.088 114 69 3 402 511 94 206 4.46e-11 66.2

Find 150 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTGTAATATATTGTTTC+TGG 0.154930 7.2:+14128562 None:intergenic
ACGGCTGATGAGCAAGTAAA+AGG 0.251275 7.2:-14135587 MS.gene020313:CDS
TATTGTTTCTGGAGAATTAT+AGG 0.301554 7.2:+14128573 None:intergenic
TTATAACCATTACAGACTTA+TGG 0.303288 7.2:+14136297 None:intergenic
CGGAGACGAGTTTGCGTTTG+TGG 0.311427 7.2:+14139171 None:intergenic
GCTTTGCTCCATAGGTTGAT+AGG 0.326757 7.2:-14137306 MS.gene020313:intron
TTGATGATTTCATAATAATC+AGG 0.349454 7.2:+14129037 None:intergenic
ATGTACTCCTTGGGCATATT+GGG 0.349906 7.2:+14137255 None:intergenic
GCTGGTGGTGGTTCTGTTCC+CGG 0.350187 7.2:-14138822 MS.gene020313:CDS
AATGTACTCCTTGGGCATAT+TGG 0.350870 7.2:+14137254 None:intergenic
TGTTCCCGGCATTGTGGTTA+AGG 0.351443 7.2:-14138808 MS.gene020313:CDS
CAGTATGCTCGTGATGTAGA+TGG 0.352269 7.2:-14135533 MS.gene020313:CDS
ACGAATTATTACCTTGCATA+TGG 0.360069 7.2:+14136239 None:intergenic
GCGGAGGACCACTCCGTTCC+CGG 0.369848 7.2:-14139250 MS.gene020313:CDS
GTCGCGTGTGTCGGCGGATA+AGG 0.370974 7.2:+14139118 None:intergenic
ATAAGTCTGTAATGGTTATA+AGG 0.370987 7.2:-14136295 MS.gene020313:CDS
GTACATTGTCCGGCTTGTTA+TGG 0.371441 7.2:-14137238 MS.gene020313:CDS
CGCTGATGCTTGGCCATTCA+AGG 0.378468 7.2:-14129083 MS.gene020313:CDS
AATTGTCACATTGTTTATCC+TGG 0.388783 7.2:-14131828 MS.gene020313:CDS
TTGTCATTTCAGTTACATAA+AGG 0.392837 7.2:-14133985 MS.gene020313:intron
GTGGGATGGAGAAGCGGATT+GGG 0.395143 7.2:+14139223 None:intergenic
AAATCAGTGTAAGGAAGCTT+TGG 0.395327 7.2:+14133924 None:intergenic
TGTTGGATATTTCATCAAAC+AGG 0.399632 7.2:-14135474 MS.gene020313:intron
TGAGGTGGCGGAAGCGGAGG+CGG 0.412980 7.2:+14139199 None:intergenic
GTCGTCGACAACTGCATCTT+CGG 0.415404 7.2:+14139022 None:intergenic
ACCTTCTGAAAATCGATTCC+AGG 0.416400 7.2:+14131810 None:intergenic
GATGGATGAGGTGGCGGAAG+CGG 0.418204 7.2:+14139193 None:intergenic
GAACGGTGGCGCGTGATCTT+CGG 0.429922 7.2:+14139151 None:intergenic
TCCCTACTGAACTTTGTTGC+CGG 0.434871 7.2:+14128390 None:intergenic
AACAGAACCACCACCAGCAC+CGG 0.436102 7.2:+14138827 None:intergenic
ATCTGAAGACAATGAGTAAG+AGG 0.441257 7.2:-14128672 MS.gene020313:CDS
CCTGTCACCAGTGCCGGTGC+TGG 0.441437 7.2:-14138840 MS.gene020313:CDS
ACTGAACTTTGTTGCCGGAC+TGG 0.445882 7.2:+14128395 None:intergenic
CATTCACGGTTCAGAACCTT+AGG 0.449882 7.2:-14129378 MS.gene020313:CDS
ATTTATGCGTACACTTCTAA+AGG 0.451557 7.2:-14129313 MS.gene020313:intron
ATCAGCCGTAATTGCACAAA+AGG 0.453536 7.2:+14135601 None:intergenic
GCATCAACGGGTTCCTTGAA+TGG 0.456294 7.2:+14129070 None:intergenic
CGTGAATGACCCCACTGATC+AGG 0.456735 7.2:+14129393 None:intergenic
TTTCTTGAGACTCTCTTCCC+TGG 0.457802 7.2:+14138731 None:intergenic
GATGCTCTCGAGGTCGTCAT+TGG 0.466061 7.2:+14139082 None:intergenic
TGATGGAGTTGACCAGCATA+TGG 0.467588 7.2:-14138122 MS.gene020313:CDS
TGGATGGACTCCTGATCAGT+GGG 0.469379 7.2:-14129403 MS.gene020313:CDS
CCAGCACCGGCACTGGTGAC+AGG 0.470254 7.2:+14138840 None:intergenic
CACAATATGCAGAAAGAAGC+TGG 0.470711 7.2:-14131481 MS.gene020313:intron
GGCGGAAGCGGAGGCGGAGT+GGG 0.471897 7.2:+14139205 None:intergenic
CTGATCAGTGGGGTCATTCA+CGG 0.472254 7.2:-14129392 MS.gene020313:CDS
ATGGTTGATAGCCAGAGGTT+TGG 0.476007 7.2:-14135632 MS.gene020313:intron
ACCAGTGCCGGTGCTGGTGG+TGG 0.476363 7.2:-14138834 MS.gene020313:CDS
GGACCTCCTGTCACCAGTGC+CGG 0.477398 7.2:-14138846 MS.gene020313:CDS
GGAACATCTCGTGCATCAAC+GGG 0.478670 7.2:+14129058 None:intergenic
GAAGCGGAGGCGGAGTGGGA+TGG 0.479379 7.2:+14139209 None:intergenic
CTAGTGGTGCTTATAGTGCC+AGG 0.482208 7.2:-14138749 MS.gene020313:CDS
AAGCCGGACAATGTACTCCT+TGG 0.484190 7.2:+14137245 None:intergenic
GGATGAGGTGGCGGAAGCGG+AGG 0.488516 7.2:+14139196 None:intergenic
ATAAGGCGTAATCACGTTGT+TGG 0.488617 7.2:-14136278 MS.gene020313:CDS
TTTACATGTCTGTCAAATGA+TGG 0.489812 7.2:-14138139 MS.gene020313:CDS
GACGAGTTTGCGTTTGTGGA+TGG 0.492132 7.2:+14139175 None:intergenic
ATCTTACCTGTCTTTGACGA+CGG 0.492727 7.2:+14133889 None:intergenic
ATCCTCCTTAACCACAATGC+CGG 0.498095 7.2:+14138803 None:intergenic
AGTGGGATGGAGAAGCGGAT+TGG 0.499028 7.2:+14139222 None:intergenic
TAGGAGCCATAAGTCTGTAA+TGG 0.501041 7.2:-14136303 MS.gene020313:CDS
TGCCCAAGGAGTACATTGTC+CGG 0.501356 7.2:-14137248 MS.gene020313:CDS
ATAGTTGATAAATCAGTGTA+AGG 0.505112 7.2:+14133915 None:intergenic
GGCGCCGTCGCGTGTGTCGG+CGG 0.506599 7.2:+14139112 None:intergenic
TAAGGCGCCGTCGCGTGTGT+CGG 0.507506 7.2:+14139109 None:intergenic
AGTTACATAAAGGATTATGA+TGG 0.508182 7.2:-14133975 MS.gene020313:CDS
TTCGTATTGCGAGGAGCGGA+AGG 0.508578 7.2:+14138927 None:intergenic
AGGAACATCTCGTGCATCAA+CGG 0.509312 7.2:+14129057 None:intergenic
AAAATTATTGAAGACATCCC+TGG 0.509554 7.2:-14131448 MS.gene020313:CDS
CGGCTGATGAGCAAGTAAAA+GGG 0.509794 7.2:-14135586 MS.gene020313:CDS
TGAAATCATCAAAGATCCAA+TGG 0.510815 7.2:-14129026 MS.gene020313:CDS
TGCATGATCACGCTGATGCT+TGG 0.512665 7.2:-14129093 MS.gene020313:CDS
AGCCGGACAATGTACTCCTT+GGG 0.520322 7.2:+14137246 None:intergenic
CTGGATGGACTCCTGATCAG+TGG 0.521067 7.2:-14129404 MS.gene020313:CDS
GAGTAAGAGGGTGGAGTCAG+AGG 0.522291 7.2:-14128659 MS.gene020313:CDS
TCCTCCTTAACCACAATGCC+GGG 0.522458 7.2:+14138804 None:intergenic
GTTACATAAAGGATTATGAT+GGG 0.522634 7.2:-14133974 MS.gene020313:CDS
ATCAGAGTCGTTTCCACGAG+CGG 0.526319 7.2:+14139058 None:intergenic
TGGCGGAAGCGGAGGCGGAG+TGG 0.526371 7.2:+14139204 None:intergenic
GAGTTGACCAGCATATGGTT+TGG 0.527640 7.2:-14138117 MS.gene020313:intron
TTTGCGTTTGTGGATGGATG+AGG 0.531469 7.2:+14139181 None:intergenic
TCTGATGGAGCTAAAGATGC+TGG 0.534732 7.2:-14138867 MS.gene020313:CDS
AGGCTATCTCACCAAACCTC+TGG 0.536519 7.2:+14135621 None:intergenic
GAGAAGCGGATTGGGAACTC+CGG 0.537455 7.2:+14139231 None:intergenic
GCTCTCGAGGTCGTCATTGG+AGG 0.537689 7.2:+14139085 None:intergenic
CTCGAGAGCATCTCCGCTCG+TGG 0.538084 7.2:-14139071 MS.gene020313:CDS
GAAATCATCAAAGATCCAAT+GGG 0.538815 7.2:-14129025 MS.gene020313:intron
GGCGGAGTGGGATGGAGAAG+CGG 0.540145 7.2:+14139217 None:intergenic
TATGATCCGTCGTCAAAGAC+AGG 0.542109 7.2:-14133895 MS.gene020313:intron
ATGCCAATAACAGGAGAGGC+TGG 0.548422 7.2:-14129423 MS.gene020313:intron
CACATTTGAGATGTTTGTTG+AGG 0.548474 7.2:-14128626 MS.gene020313:CDS
TGTTATACCAAACCATATGC+TGG 0.553929 7.2:+14138110 None:intergenic
TGCGGAATTTCACTGCTGCT+AGG 0.554071 7.2:-14138962 MS.gene020313:CDS
TTGGAGAAAGATCGATGGCA+TGG 0.554213 7.2:-14134317 MS.gene020313:CDS
ATATCCAACAGCATTATTGT+CGG 0.554921 7.2:+14135487 None:intergenic
GTTAAGATCGAACAATCTGA+TGG 0.556232 7.2:-14138882 MS.gene020313:CDS
GGAAGAGAGTCTCAAGAAAG+AGG 0.556806 7.2:-14138727 MS.gene020313:intron
GAGGTCGTCATTGGAGGTTA+AGG 0.557908 7.2:+14139091 None:intergenic
GTCACCAGTGCCGGTGCTGG+TGG 0.558540 7.2:-14138837 MS.gene020313:CDS
TATGCCGACAATAATGCTGT+TGG 0.559755 7.2:-14135491 MS.gene020313:CDS
GTGCATTCGATTCTCCAGTC+CGG 0.560644 7.2:-14128409 MS.gene020313:CDS
GATGAGCAAGTAAAAGGGTA+TGG 0.564172 7.2:-14135581 MS.gene020313:CDS
AGGCGTAATCACGTTGTTGG+AGG 0.565781 7.2:-14136275 MS.gene020313:CDS
GTGTCGGCGGATAAGGAAGA+AGG 0.571324 7.2:+14139125 None:intergenic
ACCACCACCAGCACCGGCAC+TGG 0.571508 7.2:+14138833 None:intergenic
CGGATTGGGAACTCCGGGAA+CGG 0.572901 7.2:+14139237 None:intergenic
AGAAGCGGATTGGGAACTCC+GGG 0.578469 7.2:+14139232 None:intergenic
ACTGAAAATTTGCAGACTAG+TGG 0.582825 7.2:-14138765 MS.gene020313:CDS
AATGTCGGTAGAACCGCCTA+AGG 0.583109 7.2:+14129362 None:intergenic
ATTTACTAAAGAGATTCACT+TGG 0.583909 7.2:-14134336 MS.gene020313:CDS
CAATAACAGGAGAGGCTGGA+TGG 0.587038 7.2:-14129419 MS.gene020313:intron
GTCCGGCAACAAAGTTCAGT+AGG 0.592842 7.2:-14128392 None:intergenic
GATAAGGAAGAAGGAGGGAA+CGG 0.599465 7.2:+14139134 None:intergenic
TTCACTTGGAGAAAGATCGA+TGG 0.601600 7.2:-14134322 MS.gene020313:CDS
TTTGTGGATGGATGAGGTGG+CGG 0.603088 7.2:+14139187 None:intergenic
TATATTACAAATGTGCTACA+AGG 0.604883 7.2:-14128552 MS.gene020313:intron
TGGAGAAAGATCGATGGCAT+GGG 0.610281 7.2:-14134316 MS.gene020313:intron
TACATAAAGGATTATGATGG+GGG 0.611600 7.2:-14133972 MS.gene020313:CDS
TCCCGGCATTGTGGTTAAGG+AGG 0.613963 7.2:-14138805 MS.gene020313:CDS
GCGTTTGTGGATGGATGAGG+TGG 0.614248 7.2:+14139184 None:intergenic
TTACATATCGTCCATATGCA+AGG 0.615036 7.2:-14136250 MS.gene020313:intron
CACGAGCGGAGATGCTCTCG+AGG 0.618882 7.2:+14139072 None:intergenic
TAAAGTACGTACTTAAACCA+GGG 0.618961 7.2:+14131431 None:intergenic
TCCGGCAACAAAGTTCAGTA+GGG 0.624085 7.2:-14128391 None:intergenic
AAGGAAGAAGGAGGGAACGG+TGG 0.624336 7.2:+14139137 None:intergenic
AGCAGCAGTGAAATTCCGCA+TGG 0.625316 7.2:+14138965 None:intergenic
TTGTCCGGCTTGTTATGGAT+AGG 0.625760 7.2:-14137233 MS.gene020313:intron
TCACGGTTCAGAACCTTAGG+CGG 0.626652 7.2:-14129375 MS.gene020313:CDS
AGTATGCTCGTGATGTAGAT+GGG 0.632008 7.2:-14135532 MS.gene020313:CDS
TCGGCGGATAAGGAAGAAGG+AGG 0.632387 7.2:+14139128 None:intergenic
TGGGAACTCCGGGAACGGAG+TGG 0.633367 7.2:+14139242 None:intergenic
TTACATAAAGGATTATGATG+GGG 0.635970 7.2:-14133973 MS.gene020313:CDS
TCTGAAGACAATGAGTAAGA+GGG 0.636310 7.2:-14128671 MS.gene020313:CDS
GCACCGGCACTGGTGACAGG+AGG 0.636911 7.2:+14138843 None:intergenic
AAGATGGAATCACACGGCGG+AGG 0.639882 7.2:-14139266 MS.gene020313:CDS
ATAAAGTACGTACTTAAACC+AGG 0.643028 7.2:+14131430 None:intergenic
ATTACCTATCCATAACAAGC+CGG 0.643590 7.2:+14137229 None:intergenic
TAGTGGTGCTTATAGTGCCA+GGG 0.645563 7.2:-14138748 MS.gene020313:CDS
GAAGACAATGAGTAAGAGGG+TGG 0.646755 7.2:-14128668 MS.gene020313:CDS
TGGTTCTGTTCCCGGCATTG+TGG 0.649546 7.2:-14138814 MS.gene020313:CDS
ACAACTTCCCAATATGCCCA+AGG 0.664012 7.2:-14137262 MS.gene020313:CDS
TTATCCGCCGACACACGCGA+CGG 0.678662 7.2:-14139116 MS.gene020313:CDS
GGATGGACTCCTGATCAGTG+GGG 0.689699 7.2:-14129402 MS.gene020313:CDS
CGGCGGATAAGGAAGAAGGA+GGG 0.691761 7.2:+14139129 None:intergenic
AGCAGTGAAATTCCGCATGG+AGG 0.698326 7.2:+14138968 None:intergenic
ATGACAACGGTTCCTCCATG+CGG 0.702038 7.2:-14138980 MS.gene020313:CDS
AACCCTAAGATGGAATCACA+CGG 0.703924 7.2:-14139272 None:intergenic
GATCTTCGTATTGCGAGGAG+CGG 0.710031 7.2:+14138923 None:intergenic
GACGAGTACGATAATGACAA+CGG 0.726249 7.2:-14138993 MS.gene020313:CDS
CCTAAGATGGAATCACACGG+CGG 0.818286 7.2:-14139269 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.2 gene 14128393 14139285 14128393 ID=MS.gene020313
chr7.2 mRNA 14128393 14139285 14128393 ID=MS.gene020313.t1;Parent=MS.gene020313
chr7.2 exon 14138728 14139285 14138728 ID=MS.gene020313.t1.exon1;Parent=MS.gene020313.t1
chr7.2 CDS 14138728 14139285 14138728 ID=cds.MS.gene020313.t1;Parent=MS.gene020313.t1
chr7.2 exon 14138118 14138182 14138118 ID=MS.gene020313.t1.exon2;Parent=MS.gene020313.t1
chr7.2 CDS 14138118 14138182 14138118 ID=cds.MS.gene020313.t1;Parent=MS.gene020313.t1
chr7.2 exon 14137234 14137314 14137234 ID=MS.gene020313.t1.exon3;Parent=MS.gene020313.t1
chr7.2 CDS 14137234 14137314 14137234 ID=cds.MS.gene020313.t1;Parent=MS.gene020313.t1
chr7.2 exon 14136251 14136322 14136251 ID=MS.gene020313.t1.exon4;Parent=MS.gene020313.t1
chr7.2 CDS 14136251 14136322 14136251 ID=cds.MS.gene020313.t1;Parent=MS.gene020313.t1
chr7.2 exon 14135475 14135643 14135475 ID=MS.gene020313.t1.exon5;Parent=MS.gene020313.t1
chr7.2 CDS 14135475 14135643 14135475 ID=cds.MS.gene020313.t1;Parent=MS.gene020313.t1
chr7.2 exon 14134317 14134360 14134317 ID=MS.gene020313.t1.exon6;Parent=MS.gene020313.t1
chr7.2 CDS 14134317 14134360 14134317 ID=cds.MS.gene020313.t1;Parent=MS.gene020313.t1
chr7.2 exon 14133896 14133995 14133896 ID=MS.gene020313.t1.exon7;Parent=MS.gene020313.t1
chr7.2 CDS 14133896 14133995 14133896 ID=cds.MS.gene020313.t1;Parent=MS.gene020313.t1
chr7.2 exon 14131812 14131880 14131812 ID=MS.gene020313.t1.exon8;Parent=MS.gene020313.t1
chr7.2 CDS 14131812 14131880 14131812 ID=cds.MS.gene020313.t1;Parent=MS.gene020313.t1
chr7.2 exon 14131443 14131491 14131443 ID=MS.gene020313.t1.exon9;Parent=MS.gene020313.t1
chr7.2 CDS 14131443 14131491 14131443 ID=cds.MS.gene020313.t1;Parent=MS.gene020313.t1
chr7.2 exon 14129314 14129432 14129314 ID=MS.gene020313.t1.exon10;Parent=MS.gene020313.t1
chr7.2 CDS 14129314 14129432 14129314 ID=cds.MS.gene020313.t1;Parent=MS.gene020313.t1
chr7.2 exon 14129026 14129119 14129026 ID=MS.gene020313.t1.exon11;Parent=MS.gene020313.t1
chr7.2 CDS 14129026 14129119 14129026 ID=cds.MS.gene020313.t1;Parent=MS.gene020313.t1
chr7.2 exon 14128553 14128694 14128553 ID=MS.gene020313.t1.exon12;Parent=MS.gene020313.t1
chr7.2 CDS 14128553 14128694 14128553 ID=cds.MS.gene020313.t1;Parent=MS.gene020313.t1
chr7.2 exon 14128393 14128456 14128393 ID=MS.gene020313.t1.exon13;Parent=MS.gene020313.t1
chr7.2 CDS 14128393 14128456 14128393 ID=cds.MS.gene020313.t1;Parent=MS.gene020313.t1
Gene Sequence

>MS.gene020313

ATGGAATCACACGGCGGAGGACCACTCCGTTCCCGGAGTTCCCAATCCGCTTCTCCATCCCACTCCGCCTCCGCTTCCGCCACCTCATCCATCCACAAACGCAAACTCGTCTCCGAAGATCACGCGCCACCGTTCCCTCCTTCTTCCTTATCCGCCGACACACGCGACGGCGCCTTAACCTCCAATGACGACCTCGAGAGCATCTCCGCTCGTGGAAACGACTCTGATTCTGATGACGATTCCGAAGATGCAGTTGTCGACGACGACGAAGACGAGTACGATAATGACAACGGTTCCTCCATGCGGAATTTCACTGCTGCTAGGCTTAACAATGCTCCTTCCGCTCCTCGCAATACGAAGATCAAAAGTGAAAATTCAACTGTTAAGATCGAACAATCTGATGGAGCTAAAGATGCTGGACCTCCTGTCACCAGTGCCGGTGCTGGTGGTGGTTCTGTTCCCGGCATTGTGGTTAAGGAGGATGCGACGAAGATATTCACTGAAAATTTGCAGACTAGTGGTGCTTATAGTGCCAGGGAAGAGAGTCTCAAGAAAGAGGTAATTAACTCTTCAATTTTATCTTCTTTAACTTAATTTCAATTCTCGATAAAGTTTCGTAGTTACTTGTGTAAATTTTGTTTGAGAATTTGTTTCGAAAACTCAAAATTTCATAGTTATTTGTAATTTTTGTTTGAGAATTTGTAAATTTCATAAGAGTTTTTAATTGCTTGTTAATGACAGTTTACTTAAAGTTGTTAGGAACTGTTTGGATTAACTTATTTGAGATTCATTGCGAGACTGTTTGGGAGAATTTTTGAAAACACCTTATGACATTTTTCATAAACTTTTTTCAGCTTATTTTCATAAGTTCTCCAAGATTGCTTATGAAAACAGCTTATAGCATTTACAAAACAATTTAACTTTATTATATCATTTGCAACAACAATAACTTCCGTAAGGTTATACATAACGCTTACCATGATAAGCACTTGTACAATAAGCTGTTTATCTAACCAGGCCCATAGTTTTATATAAATTATTACAAACTAGTTTGAGCTTTGAGGTGATAGGTGTAATGATTGAGATTGTATTGTCTTTTTCAGGAAGAAACTGGAAAACTCAAATTTACATGTCTGTCAAATGATGGAGTTGACCAGCATATGGTTTGGTATAACATTTATGCTTCCCTGCTTACACTACTGATCTTCTTATTAACATTTATGCATATAATATTTACATGATTGCTAGTAAGCGGGAATGGATCAAACAATTAACTTTTGGGGAGGGCAAGTATAAAAGTGAGAGTAAACTTATATTTCCAGCAATTTAAAGATGTAATCGATAGTATATTTATGCTCTTTTTTATAGGAGAGATCAAATTTGTTACTGAATAGAATGGAAAATAATATCATTGTTTTACCATTGAGAGATCAATTCAGTGGAATTTGAAGAACCAATGTGATGGTCTCCATTGACTTGTAGGGTCTGTTTGATGTCAATAAATAGCAGACCAATGTGATGCGAAGTATATATTTTAAGGATTGAAATGATATTTATTCTTAAAGTTAAGATATTAAAAATTAGTGGTTTGAAATATGAATGTATCATACCGTTTTCAAAGTTTAGGCTGTGCATAATGATACTCCGAGCATACTCCTAATTTATGTGAGTATTTTTCAGTAGACCATATAACCTATAACATAATACCTATTAGCCATTCACAAAAAATAAATAAAAATACATACTCATTAACCTAATGACTACATTTTTTTAGTTACAGTTACGAATTAGTGCTAGAATCTATGCAACATGAACTTATATTAGGCCAAGGCACCTGCTCACCCCCATTGCATCCATTTTAGTCTGCTACATTCTTTTGTTAGTTAAAACTCAAGACAATTTTTTAGTGGGCGAAATAATCATTACTGATATTGTTCCATTCTTGCCATTGTTATTTGCTTTGCTCCATAGGTTGATAGGATTGAAGAATATATTTGCTAGACAACTTCCCAATATGCCCAAGGAGTACATTGTCCGGCTTGTTATGGATAGGTAATTCCCACAATCTTTTTAAGTACTCATCATACTTTCTTACTCACACGGTGCTTAAATTAGTCTGGGTATGATACATATTTGGTGTAAAATTATTTCTCCATTCAAGGCAAAAACAACTCCCAGTTGCTCTGCCCCACAAAACCTTATTAAAAAGCATGTCTTATACTATTTGTATATCAAATATAATAATGTTGACCAATGCGTTTTAGTTTGGAATGTAAATTTTCTTCATTAGTAACAACTGGGAAACTTATTTTACTATAATTCTCTCCTCCCTTTCTCTACCCATCTAAACTAGGATCCCATAATTTCTATGTAGAAAAAACTAGCAGATACAGTTCTAATTAATTGCGAAGTGGAAGTGTATAAAGTTTTTTCCTGTTGTTTTTATGGTTTCCCAAAGATTTTGCAGCCATACCAAGCAATAAGAAACTAGGAATAGAAGTGAAAGACATGAAACTATCTATACAGAATAGCTTAGTATTTTTACAAGTTACTTTACGTAATTCATACTTGTGGCATGAGTAATAATACTGTATCTGTTGCTGCTTCAAAGTTCAAAGAGTATTTGAAACTTGATACGGAGGAGCACCATAGGTTTACCAACGTGCCATACCAGGAGTACTCTTCATTCTGCCAAGAGGACCACTGTTGCTTCTCGGTCTTACATCAATATCATCTCCATTATTTTATTAAAGATTAAAGTTTGATTTGTAAGGGATATCTCTATTTGATACTTGAGATATTTCTCATAAAAGTTCTATTTTGCATGCAGGATTAGTTCGGAAACTAGTCAATTTATTGAATATGAACTGCATCCTAGATATTATTATTTTTTTCCTCTGCTACTCTGGAATTTTTCCTCATTTTGTCTTTAATTATGAAACCTTTTTATGGTAAATTTGTAGGAGCCATAAGTCTGTAATGGTTATAAGGCGTAATCACGTTGTTGGAGGCATTACATATCGTCCATATGCAAGGTAATAATTCGTCTCTATGTTTTTATCTACCTTTCAGGTTCTAGTTGTCATGTGACTGAAAGGTCACGGGTTCAAGTCCTGGAAACAGCCTCTTGTGTAAAACAGGGTAAGGCTGCGTACAATACACCAAATGGTGGGACCCCTTCCCGGACCCTGCATATGCGGGAGCTCTAGTGCACCGGGTTACCCTTTTATATCTATATTCATGTCGTTATATTGTTATTGTTATTGTTCTAATATCAATAACCGAGAACAAAATGTTTACAGTAATAGTAGTCATTATCACCGGTTATTAAAAAGGTCAACTGTTGTCTGTTTTAGCTGTTATATTGTCTTATTTGTATAGTTGTACTTTCGTTGCACATGATAAAAATGCTTCTCAAGGTCCATATAAGTTAACAGTCTGGGATTCAGTTTGATTAATAATTTGACGGGAAATACCCAAGCTCTAAATATATGTTGTGCTTGTTTTCCCCCATTAATTTCGTCTCCTGCCTACTTATTTTTTCTATAATTTCTCCTCCCCACCCCCGACTAAAAAAATTTTACTTGTAAGGATTGTGCCATGGTTTAATTTATTAATACTGTTGTGCACTATGGTTGATAGCCAGAGGTTTGGTGAGATAGCCTTTTGTGCAATTACGGCTGATGAGCAAGTAAAAGGGTATGGTACCAGATTGATGAATCACTTAAAACAGTATGCTCGTGATGTAGATGGGCTGACACATTTTCTCACATATGCCGACAATAATGCTGTTGGATATTTCATCAAACAGGTTTGGTTGTCAATATTTATGATCATTATCATCTGGGTATCTATTGATATCAGTAGTTAGATAAATGTTTTGCTTTCTGACCAAGTCATACATATATTATGAACAATTTCCCTAAATATTAATCTTTTTGCTACATGAGTTGCAGCAGTTCACATGGCAGGAAAAACAATAAAAGTAAGGATCTTGCTAACAAGTGTCCTAAAGGCTCATGTTAATGAGCTAAATATAGAAATATTATCTTGGAATATGTGTTGAACAGAACAATTTTAAACTTTTAAAGAATTAAATACACAACTTCCAAAATAATATCTCTATCTTTGACTCCTTAATATGTGCCCTTGGCACTTGTTAGCATATGCCTAAAAGTAATATGCATATTTCTAACATGTGTAGGTGCAATGTTTATTGCGCCAAGCCGCTAACCACGCTCTGGAGCATCACCTCCTAGTTGGGTTGTGCTAAATGCTAATAGTATAATAGTATGGTGCATCAATATGTATTGCTATTATGGAGTAAAAGGATGATGTGGCTAAAGGAGCAATAATTTGGGAAATTGTTGGAAAATGTACAACTAAAATATAGTATAGGATGATGTTGAAAAATACCTAATTTGGGATAAAAAAAACCATTTTTCTGTCTGATAAGAGATTTTGTCTGACAAATTTTCTTCGTGGTTCTTGATGGCTTGGTAAATTCCAATAGAGATACATCTGGATTTTACTAGCTGGCATTAGAAAATAGAAAGTATGTAATGGGTTCCTTCTGCCCTAATTCTGGAAAATAATAGTAGAATTATCTGTTACGAACCTTCTTTTTTGCTTCTTGGTGGAGGCTATCAATATTAGTTTATTCGCGAAGAACTTTCACAACGACCAGTATATTTCCTGGTTAAGTTTGTCAGGAATTTGGTAGCCACAGAAGCATAATTTCACTGCATGGTAGCAGTCATATAGGATCCATATCTTGTTCTTTCTATTTCATTTAATCTTTTGGTACTCTAGAAATTATTTTTTAAATTTGGAAGGGGTTCTGTGCCAAAAAAACCTTATGTTGAATTAACCGGATACTGCTTTACATTTTACAAACTTGCAATGTTGTTTGATTGTATTTTCAGGGATTTACTAAAGAGATTCACTTGGAGAAAGATCGATGGCATGGGTATGCTTATACTCAATTTTGTTGTCTGATATCTATGAGAAGCACTTCCCACACATTCATTTCATGATTTTACTATAGATGCTGTGCTGTGTCTATTAAGTGAACTGAAAATTTTGAACTTAGATTTTGCTATTATATAACTTCATTTAGTTGTTGAGGGTGTGGGGTTTTAAAGTACAATTGCAGGGATTTCTAGTAACTTTGTTTAGATTATGATTATGATTTCTATTAAATAAAAATTTCATGATGCACTATTTAGTTAAATGGATGTATTCTCGTTTACAGTCTATGAAAATTCATTATATTTACTTGTCATTTCAGTTACATAAAGGATTATGATGGGGGAATTCTCATGGAATGTAAGATTGATCCAAAGCTTCCTTACACTGATTTATCAACTATGATCCGTCGTCAAAGACAGGTAAGATAATATATATATTTTTAATTTAGTTTTAATTTGCATTGTTAAAACAGGGTCATATCATATCACCCATCTAAAATGTTTTAGATAAATTTTATTTTAATAAAAAGACAGGATTATAATTGAAAATAACTAATACATTAAATCGTACTGTTAAATCTCAGAAGAAGCTTATTTGTTTTTTTGGGTAGATAGATGAAATGGTAATAGCCATTGGAAACTCACACACACAAGTGGAGGAGCCGGGGTTCAAACCCTTGCCACAGCGTCCGGCCTAGAAATTTCGGCATTTTTGCCAATTGAACTAGAACTTATTATGAACTCTGAAAAAGCTTATTATCAATGCACACACACACATATTAGCCGACCCCACTTAGCAGGATAAGGCTTGGCTGCTGTTGTTGTTATGTGCGTGTGTGTGTGTTCAGTGTAGTTTGTTATTTTTACAAATCTTACGATCTCTGTCACATTAAGGTCCTATGTTTTACGATCTTGCAACCTCCTCCTGGTCTTTAGGCAGGATCTCGATCTTGACAACATTGGATCAAACAATTTGCTGTCACAAGAATTGTTTACCTTACAATGTTGAAGATCAAAATGAGAGTATCAAATATGAAGTATAAATAGGAAAGGAAGATTACAAATTATATTAGAATAAGAATTTTTTATAGCTTTGAATAGGAGTAACAAAAGGTTCACAAAATGTTTCACCCTATCCCTGGTCATGGACTTGGTTGTTACATATTCAACAAAAGAGCACAATTCTGAACCCAGTTCCATAGTACAAGAGCAATAAAGCAGTACCGGACATCACAAAACTCGAATCCTAAGGCTTTGTTTGGGAGTTTAGAGGGGAGGGGAAGGGAAGGCTTTGAGGGGTGGAAAATTTGAGGGAAAATGGAGAAATCTTTCAAAAATTTTAAAAGAGTAGTTTTTTAGAGAATGATAAACTAACACATATGATTACTATATTTTTAATTTTAAAAATATTATAACAACATAGATTAAATTTGAAGAATTCATATAAACCCTCCAAAACCCTTCTCCAATACAATTTTATAGTTCCCCCAAATGAGGAGGGTTTTGTATTATGAAGAAAAGTTAACCCCCCAAAGCCCTCCCCTCCCATTTTCCTCTATTTCTTCCACTTGCTCATTCCTTTTTTCCCAAGCCTTCCCCTCCCTTCCCCTCCAAACTCGCAAACAAAGCCTAAAGGGCTTCCTAGCTGATAGGATGTCCTTGAGAGATATCATTTTTCTACGATTTGAGGATGAGGATGGTGCTTTTTCTGGCGCGACTTCCTCGTGATAGGGGACCGAGAATGTCAGAAGGGAGGCTGTGAATGTGAGCTCTTTTAGGTGGTGTTAGGTCCTAGATGATGTAAAAGTTCTAAATTAGATATTCAAACATACACCTGCACAATTGTTCCAGCAGAAAATACTATAAAAAAGAAAGATGTTGACAGGGACACGAATTTTGTCTTGATTCTCCAAGAATTGGAGAGCTTGGCCTCCCTCCAAATAACCACTCCAATAACTTCCCAATAGCCAATTTTCCCCCTGTCTGGTCAATTGATTACTTTTTTTTTTTCTTTCTCTATGATGTGTAGCTGGCCTGGTCTGCTTTAATATTGTGAACAACTAAGTTATTTTTGTGTTGTATTTCTATTATTTCAAATCTGTTTTACAATTTTGAGTGAATTTTTTGTCGGTCTTGTCTGGTCTGATCAGTCATATTTTTTTGAATGCATTATCTTTGTTTTTACATGTGTAGCTGGTCTGATCTTTTTTATATTTTTGAATGCATTATCTTTGTTTCTATATGATGTATAGTTGGCCAGTTTAAATTTTGTAAAAAAATATGATGTTATCTTGTTGAAGTTTTAGCCATTTTTATATTTTGAATGCAGTATCTTTGTTTCTATATGATGTTTAGCTTCTACTAGTTAATATTTTTACTTGCCACTCTTAATAAATCATGACATGTTTGGTTATTATTGTTGGTTGTAATTGTAGGCAATAGATGAAAAGATTAGAGAATTGTCTAATTGTCACATTGTTTATCCTGGAATCGATTTTCAGAAGGTATGTGGCACTCTCAATTCTGCTTGTTTCTGTAATTTCCTGTCTAGAATTTGATGTTTTCCCCATGTCTAGTGATTTTGTAAAATATGGATTGTATTGTCAGCTTAATGCATATTGCATTTGTGACATTAGCACAATTGTACTGTACTTACAATATCCAAGCATGCTAACTTCCTTAACATTAACAATGAGTAAGGATAGAGAAGAGAATCATCTTTTATTTTGGTTGAAGCTGCATTTTTCTTCTTTTTCATACATCAGTCTGATTAGAAAGCTTATAGAATATTAACTTTCCCCCTCCTGATTGACACAATATGCAGAAAGAAGCTGGTATTCCTAAGAAAATTATTGAAGACATCCCTGGTTTAAGTACGTACTTTATTCCCAATTTCTGTGTAACTACTTATCAACATTTTTTGTTTGGTTTCTGTGGGAAAGATTATGCATTACCTGTCTTCACAATACAGCGTGTTTCATGTCAATCTTTTTCGTTTCTTTTTATAGTTCAGTTAACTTTTACTTGTATGATATGTCGACCTCTTTCATCTATAAGGCCTTATGAATGGTTCCAAACCTTTTTGATTCTTAATGCTGATCGCATCTTACTGATTAAACTTAACCATGTCTAGAAGCATAGATTCTTCTCATAGTTCTAGTGTTATTATCATCATAGATTTTGTGTACGGAGTTCTGTTTTGTTATTTATGATGTAAGAAACTAATGCCGTTTTTGGAAGTTCTTGAGCTAAGGGAAGTGGGAGGCGGTATTATTTATGATGTATGAAACTTTTGCCATTTTTGGAATTTCATGAGCCAAGGGATGGAGGGAGGTGGTGTTATTTTGTTGTTGTTTGGATGTTTCATTAAAGGAGGGGAACTCTCTTTTACCTTGTTTGGGAACTAAAATTAGAGGGATGTTATTTCCCATTTTCCTTTTATTAAATTTGAAAGAAAAAAATGTCCCCTCAACCCTGAAATTCAAGGAGAAAGGATGGTGTGAACACGTTCACCTCCTTTGGTCCTTCCCCTTCCATTCCCTTTCCTCTGCAAAAAACTTCCAATCAAAAGCTTTGTCACCTCTCCTCTCCTCTCCGTGCTCCCCTACTCCTAATAAAGATAGCATAATATGTTGAAAATTGTTGTTCACACATTGCATAAGGCTGTGTGACACATGTAAATTACGTTTTTGCCCCTTCGGCAGTTAACTGCCGAATTATGAAACTTCGGCAGTTAACTACCGAGGAAAACTTCGGCAGTTAACTACCGAGGAAAATTGAAAACTTCGGCAGTTAACTGCCGAGGAATCCTCAAACCCCCGTTTTTTTTTTTTTTACAAAAACCATTAATTCTTTTTATTCTTTAAACCTAAATTTTCCTTAATTAAATTTAATTCTTTAATCCTTTTAAGGAATCAAACACAATTTTTTTTATGATTTCATTCATGTGATTTTGTTGCCATAAATGAAGAAATATGAGAGATGAATAATATCTGCAAATAATATCTGCAATCGGTAGTTAATGGACCTAAAATGATAATTCAATAAAAAAAATGCAACAACAAAAAACGTTACAAATGATAGAATAATTATATTTGTAATTATTAGTAATTAATTATAATATTTAAGATATTTTTTTGTTGTTCACAAATTATAATATTTCAGATATTATTCATCTCTCTTTCAGATAATTATATTTGTAATTATTCTATCAATAATACCTTTTTTTTTGTACAAATAAAACCACTTTTCTATTCTTAAAAAAAAAACATTTTTTTAATTAATAAACGTGATTGAATATGTAGTAATTCTAGGATCTCATATTTTTTTATTTATGGCAACAAAATCATATGAATGAAATCAACAACTTTATAAAAAGAATCGTGTATTTAATGGCAACAAAATTCATATTTCTTCATTTATGGCAACAAAATCACATGAATGAAAAAGAATTATGTTTAATTCCTTAAAAGGATTAAAGAATTAAATTTAATTAAGGAAAATTTAGGTTTAAAGAATAAAAAGAATTAATGGTTTTTGTAGAAAAAAAAAGGGGGGGTTTGAGGATTCCTCAGCAGTTAACTGCCGAAGTTTTCAATTTTCCTCGGTAGTTAACTGCCGAAGTTTTCCTCGGTAGTTAACTGCAGCCGGTTTCATAATTCGGCAGTTAACTGCCGAGGGGGCAAAAACGTATTTTACATGTGTGACACAGCCTTATGCAATGTGTCAACAGCAATTTTCTAATATGTTTGTTCATCAACTGGGATGTTGTGAAAAAATTATCCCATTGCATCCTTATGAATGAATGGTTTTCTTTTTCATATTTTGTTTGGTAATTTCCTGATCAATGTTTGAATTAATCAATGGTTGAATGCCAATAACAGGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCACGGTTCAGAACCTTAGGCGGTTCTACCGACATTGCTACAAATCTAAAACATTTAACTGCATTTATGCGTACACTTCTAAAGGCAAGTAACTTGATGTTGCACCTCGACTCAAATTTTCATTCATTGATCTTTTTCAGTGAAGTAATTGAAAACAGTGCAAAGAAGCACTGATACATAAATCCATATTCATGGATAATCCCTCCTTAAAATATGTCTGAAAGCAGAATAGTTACACTGGAGAAATCAATTATTATAATCATTTTTCTTTTAAGCAGACGATGCATGATCACGCTGATGCTTGGCCATTCAAGGAACCCGTTGATGCACGAGATGTTCCTGATTATTATGAAATCATCAAAGATCCAATGGGTAAGAAGGATCCTTATATTTCATATTAACTTAACCTATGTCTAGAAGCATGCTCGCTGCTTTTGCTATCTGTTATTGGTATGATATTATTTTGAATCCATGGATTTGGATTCTCTCACGTGTGAATCTCACATGAAGGTTTATATCAGAGATCTCATCATTAAAATTCACCGTGTCTTACATTTAAAAAAATATGCAACTAAATTTTTAATTTTCAATGGTGAGATCTTCCACATAATTCTCTTGTATGAAATCGGTACATGAGAGCATTTAAATCCATTATATAACATGTGTGTGAAGTCTATATAACATATTCCTAATTTGAGCACAGATCTGAAGACAATGAGTAAGAGGGTGGAGTCAGAGGTATATTATGTCACATTTGAGATGTTTGTTGAGGATGTCAAAAGAATGTTTTCGAATGCACGGACCTATAATTCTCCAGAAACAATATATTACAAATGTGCTACAAGGCATGGTGCTTCAACCTTCTGTTTATTTTTCTTCATGCACTTGCTCTTCATATCAAGAATGTATGTGTTTACTTGTATTCTTGTATTCTTTTGCAGGCTAGAAGCACATTTTCAAAGCAAAGTGCATTCGATTCTCCAGTCCGGCAACAAAGTTCAGTAG

Protein sequence

>MS.gene020313.t1

MESHGGGPLRSRSSQSASPSHSASASATSSIHKRKLVSEDHAPPFPPSSLSADTRDGALTSNDDLESISARGNDSDSDDDSEDAVVDDDEDEYDNDNGSSMRNFTAARLNNAPSAPRNTKIKSENSTVKIEQSDGAKDAGPPVTSAGAGGGSVPGIVVKEDATKIFTENLQTSGAYSAREESLKKEEETGKLKFTCLSNDGVDQHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYASQRFGEIAFCAITADEQVKGYGTRLMNHLKQYARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWHGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYPGIDFQKKEAGIPKKIIEDIPGLREAGWTPDQWGHSRFRTLGGSTDIATNLKHLTAFMRTLLKTMHDHADAWPFKEPVDARDVPDYYEIIKDPMDLKTMSKRVESEVYYVTFEMFVEDVKRMFSNARTYNSPETIYYKCATRLEAHFQSKVHSILQSGNKVQ