AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032154

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032154.t1 MTR_2g098790 93.774 514 32 0 1 514 1 514 0.0 1003
MS.gene032154.t1 MTR_2g098540 86.888 511 64 1 5 515 1 508 0.0 926
MS.gene032154.t1 MTR_2g098520 86.106 511 71 0 5 515 1 511 0.0 913
MS.gene032154.t1 MTR_2g098540 88.235 459 54 0 57 515 6 464 0.0 858
MS.gene032154.t1 MTR_4g066580 69.961 516 152 2 1 514 1 515 0.0 770
MS.gene032154.t1 MTR_3g028720 70.175 513 148 2 7 514 2 514 0.0 768
MS.gene032154.t1 MTR_4g066590 69.094 508 156 1 5 512 1 507 0.0 754
MS.gene032154.t1 MTR_4g066240 67.913 508 163 0 7 514 5 512 0.0 743
MS.gene032154.t1 MTR_4g066240 67.780 509 163 1 7 514 5 513 0.0 739
MS.gene032154.t1 MTR_4g066630 67.057 513 168 1 1 512 1 513 0.0 739
MS.gene032154.t1 MTR_6g078450 71.399 479 137 0 36 514 34 512 0.0 738
MS.gene032154.t1 MTR_5g071520 68.561 528 148 4 1 514 1 524 0.0 737
MS.gene032154.t1 MTR_4g066210 69.358 483 148 0 32 514 37 519 0.0 733
MS.gene032154.t1 MTR_6g078330 68.226 513 160 2 5 514 1 513 0.0 729
MS.gene032154.t1 MTR_4g066640 67.409 494 157 2 22 514 23 513 0.0 715
MS.gene032154.t1 MTR_4g066330 66.281 519 144 4 1 514 1 493 0.0 712
MS.gene032154.t1 MTR_6g078380 66.538 517 166 4 1 514 1 513 0.0 702
MS.gene032154.t1 MTR_4g066280 64.087 504 153 2 14 515 17 494 0.0 688
MS.gene032154.t1 MTR_3g028720 70.306 458 131 2 7 459 2 459 0.0 681
MS.gene032154.t1 MTR_4g066340 70.548 438 128 1 78 514 2 439 0.0 673
MS.gene032154.t1 MTR_3g026280 63.125 480 172 2 35 514 19 493 0.0 654
MS.gene032154.t1 MTR_4g066630 66.449 459 153 1 1 458 1 459 0.0 654
MS.gene032154.t1 MTR_6g078450 71.698 424 120 0 36 459 34 457 0.0 653
MS.gene032154.t1 MTR_4g023000 61.297 478 179 3 37 514 23 494 0.0 628
MS.gene032154.t1 MTR_4g066580 70.118 425 124 2 1 423 1 424 0.0 627
MS.gene032154.t1 MTR_3g028720 70.379 422 120 2 7 423 2 423 0.0 624
MS.gene032154.t1 MTR_6g078330 69.927 409 123 0 106 514 1 409 0.0 614
MS.gene032154.t1 MTR_4g066630 66.745 424 140 1 1 423 1 424 0.0 603
MS.gene032154.t1 MTR_4g066240 66.667 417 139 0 7 423 5 421 0.0 597
MS.gene032154.t1 MTR_4g015420 56.189 509 182 7 19 514 45 525 0.0 588
MS.gene032154.t1 MTR_4g067040 67.734 406 131 0 5 410 1 406 0.0 584
MS.gene032154.t1 MTR_6g078330 68.010 397 125 1 118 514 15 409 0.0 577
MS.gene032154.t1 MTR_3g026400 54.851 505 218 5 13 512 8 507 0.0 571
MS.gene032154.t1 MTR_2g043200 58.787 478 163 6 43 514 70 519 0.0 570
MS.gene032154.t1 MTR_3g028720 70.130 385 110 2 7 386 2 386 0.0 568
MS.gene032154.t1 MTR_4g067040 68.848 382 119 0 5 386 1 382 0.0 559
MS.gene032154.t1 MTR_3g026620 53.981 515 227 5 5 514 1 510 0.0 556
MS.gene032154.t1 MTR_4g015460 55.422 498 183 8 28 514 32 501 0.0 550
MS.gene032154.t1 MTR_3g026400 56.103 467 197 5 47 512 17 476 0.0 546
MS.gene032154.t1 MTR_4g066630 68.011 372 118 1 1 371 1 372 0.0 543
MS.gene032154.t1 MTR_4g083000 51.357 516 234 6 1 513 1 502 0.0 536
MS.gene032154.t1 MTR_5g044000 49.903 517 230 7 21 512 8 520 0.0 524
MS.gene032154.t1 MTR_4g066640 64.921 382 127 3 13 390 11 389 0.0 521
MS.gene032154.t1 MTR_6g078330 66.048 377 125 2 5 378 1 377 0.0 514
MS.gene032154.t1 MTR_4g081530 49.388 490 240 5 28 513 14 499 1.06e-171 494
MS.gene032154.t1 MTR_0110s0030 47.104 518 263 6 1 514 2 512 8.63e-171 492
MS.gene032154.t1 MTR_0110s0040 47.490 518 261 6 1 514 2 512 9.52e-171 492
MS.gene032154.t1 MTR_4g131810 47.269 476 246 4 43 515 33 506 2.30e-164 476
MS.gene032154.t1 MTR_3g033790 48.958 480 223 7 38 513 19 480 3.30e-164 474
MS.gene032154.t1 MTR_3g033810 48.441 481 231 7 35 513 18 483 8.96e-163 471
MS.gene032154.t1 MTR_2g022760 46.899 516 261 7 4 515 6 512 1.45e-161 469
MS.gene032154.t1 MTR_7g068910 47.732 507 247 7 12 514 3 495 1.75e-161 469
MS.gene032154.t1 MTR_7g068910 46.809 517 247 8 12 514 3 505 1.80e-158 461
MS.gene032154.t1 MTR_2g079580 44.531 512 273 8 3 512 1 503 6.10e-154 450
MS.gene032154.t1 MTR_2g079550 45.098 510 269 8 5 512 1 501 9.22e-154 449
MS.gene032154.t1 MTR_4g083000 52.068 411 191 4 106 513 1 408 6.39e-153 443
MS.gene032154.t1 MTR_2g022710 43.504 508 276 7 10 515 12 510 2.88e-150 440
MS.gene032154.t1 MTR_4g131800 45.155 516 267 6 2 515 490 991 5.45e-150 455
MS.gene032154.t1 MTR_4g016920 45.833 480 242 7 36 512 25 489 2.60e-148 435
MS.gene032154.t1 MTR_3g026400 56.216 370 152 5 13 377 8 372 4.20e-146 424
MS.gene032154.t1 MTR_7g033860 45.094 479 240 7 40 512 50 511 1.37e-145 428
MS.gene032154.t1 MTR_5g068740 44.559 487 247 9 32 513 21 489 2.64e-144 425
MS.gene032154.t1 MTR_1g088610 45.868 484 244 8 32 513 21 488 2.41e-143 426
MS.gene032154.t1 MTR_1g088610 35.417 144 70 4 387 513 476 613 7.21e-17 84.0
MS.gene032154.t1 MTR_0108s0030 42.918 473 241 3 40 512 5 448 9.14e-137 403
MS.gene032154.t1 MTR_2g079580 45.863 423 219 7 3 423 1 415 2.89e-129 382
MS.gene032154.t1 MTR_2g022760 46.359 412 216 4 106 515 1 409 3.48e-129 382
MS.gene032154.t1 MTR_2g022710 42.699 452 249 6 10 459 12 455 2.18e-127 380
MS.gene032154.t1 MTR_2g022710 42.699 452 249 6 10 459 12 455 5.22e-127 379
MS.gene032154.t1 MTR_7g068900 45.652 414 213 4 101 513 17 419 7.94e-125 374
MS.gene032154.t1 MTR_2g022710 44.471 416 221 6 10 423 12 419 2.00e-124 370
MS.gene032154.t1 MTR_0110s0040 47.781 383 192 4 1 379 2 380 6.10e-124 369
MS.gene032154.t1 MTR_7g051510 42.678 478 252 5 39 514 76 533 1.34e-122 370
MS.gene032154.t1 MTR_7g051650 42.500 480 247 7 39 512 76 532 6.91e-122 368
MS.gene032154.t1 MTR_7g051610 42.977 477 248 6 39 512 76 531 1.06e-121 367
MS.gene032154.t1 MTR_2g022710 42.476 412 232 4 106 515 1 409 1.64e-121 363
MS.gene032154.t1 MTR_7g051650 42.348 477 248 7 39 512 76 528 2.05e-121 367
MS.gene032154.t1 MTR_1g088630 43.261 460 217 10 57 513 14 432 6.60e-121 363
MS.gene032154.t1 MTR_4g016920 44.878 410 209 6 106 512 1 396 6.62e-121 362
MS.gene032154.t1 MTR_2g022710 44.030 402 215 6 10 409 12 405 1.06e-118 355
MS.gene032154.t1 MTR_2g022710 44.591 379 200 6 10 386 12 382 3.53e-110 334
MS.gene032154.t1 MTR_1g088630 48.083 339 145 6 40 376 29 338 5.14e-105 319
MS.gene032154.t1 MTR_7g056747 41.304 414 217 5 100 512 9 397 1.01e-102 314
MS.gene032154.t1 MTR_4g016920 50.916 273 131 2 106 377 1 271 1.35e-96 295
MS.gene032154.t1 MTR_1g088630 53.759 266 117 3 40 304 29 289 6.31e-96 293
MS.gene032154.t1 MTR_0110s0020 51.172 256 119 4 11 266 18 267 8.02e-86 268
MS.gene032154.t1 MTR_5g069350 44.693 179 46 5 352 514 48 189 3.78e-33 125
MS.gene032154.t1 MTR_4g122980 26.014 419 233 13 102 512 183 532 8.11e-29 120
MS.gene032154.t1 MTR_8g038650 37.879 132 69 2 238 359 24 152 1.46e-24 100
MS.gene032154.t1 MTR_8g038650 48.214 56 28 1 45 100 5 59 3.11e-11 62.4
MS.gene032154.t1 MTR_7g028885 44.286 70 35 1 244 309 21 90 7.78e-12 62.0
MS.gene032154.t1 MTR_4g061170 65.854 41 12 1 461 499 24 64 1.73e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032154.t1 AT5G42260 54.076 503 218 5 7 508 7 497 0.0 571
MS.gene032154.t1 AT5G44640 53.293 501 227 4 14 512 6 501 0.0 569
MS.gene032154.t1 AT2G44480 54.088 477 218 1 36 512 33 508 0.0 569
MS.gene032154.t1 AT2G44480 54.088 477 218 1 36 512 64 539 0.0 569
MS.gene032154.t1 AT2G44450 54.947 475 209 2 38 512 31 500 0.0 566
MS.gene032154.t1 AT3G60130 55.346 477 207 3 38 513 30 501 0.0 557
MS.gene032154.t1 AT5G24550 51.277 509 241 6 10 514 6 511 0.0 543
MS.gene032154.t1 AT1G47600 52.381 483 215 7 34 514 41 510 0.0 530
MS.gene032154.t1 AT1G47600 52.381 483 216 7 34 514 41 511 0.0 530
MS.gene032154.t1 AT5G54570 52.610 479 222 4 37 512 29 505 0.0 527
MS.gene032154.t1 AT2G25630 52.016 496 214 5 19 512 10 483 0.0 527
MS.gene032154.t1 AT1G51470 51.967 483 218 7 34 514 41 511 0.0 525
MS.gene032154.t1 AT1G26560 51.975 481 225 5 35 512 29 506 0.0 523
MS.gene032154.t1 AT5G24540 51.670 509 239 6 10 514 6 511 0.0 522
MS.gene032154.t1 AT3G60140 48.228 508 246 5 10 514 11 504 1.37e-179 517
MS.gene032154.t1 AT2G44470 46.318 516 264 6 3 514 1 507 1.51e-173 502
MS.gene032154.t1 AT3G18080 50.413 484 230 7 33 514 34 509 2.88e-173 498
MS.gene032154.t1 AT2G44460 48.317 505 252 6 11 512 6 504 9.17e-169 489
MS.gene032154.t1 AT3G18070 48.381 494 233 10 24 514 18 492 5.51e-168 484
MS.gene032154.t1 AT2G44480 52.088 407 194 1 106 512 1 406 1.66e-167 480
MS.gene032154.t1 AT3G60120 49.485 485 234 7 36 514 12 491 2.28e-167 484
MS.gene032154.t1 AT3G18070 48.381 494 239 10 24 514 18 498 6.22e-167 482
MS.gene032154.t1 AT3G60130 54.458 415 183 3 100 513 40 449 5.93e-166 478
MS.gene032154.t1 AT5G25980 47.368 513 254 9 11 513 17 523 2.23e-165 479
MS.gene032154.t1 AT5G36890 51.050 476 220 4 39 513 17 480 2.65e-165 477
MS.gene032154.t1 AT5G36890 51.050 476 220 4 39 513 17 480 4.27e-165 477
MS.gene032154.t1 AT2G44490 47.095 482 249 5 37 513 13 493 1.97e-164 478
MS.gene032154.t1 AT2G32860 48.333 480 242 5 37 512 93 570 9.80e-164 478
MS.gene032154.t1 AT2G32860 47.390 479 249 3 37 512 93 571 1.35e-162 475
MS.gene032154.t1 AT5G54570 52.471 425 198 3 37 459 29 451 3.82e-162 468
MS.gene032154.t1 AT5G26000 49.793 482 227 9 38 512 38 511 5.36e-161 468
MS.gene032154.t1 AT1G75940 48.454 485 236 8 38 512 37 517 6.18e-158 460
MS.gene032154.t1 AT3G60130 52.771 415 179 4 100 513 40 438 1.30e-156 454
MS.gene032154.t1 AT3G03640 43.969 514 281 5 7 514 2 514 1.28e-155 454
MS.gene032154.t1 AT1G61820 45.049 515 269 7 5 514 1 506 2.25e-154 450
MS.gene032154.t1 AT5G24540 50.221 452 219 5 10 458 6 454 2.59e-153 446
MS.gene032154.t1 AT3G21370 46.787 498 254 8 24 513 18 512 3.59e-153 448
MS.gene032154.t1 AT3G09260 45.363 496 259 8 26 514 22 512 5.03e-151 442
MS.gene032154.t1 AT2G44470 45.752 459 237 5 3 458 1 450 5.21e-151 439
MS.gene032154.t1 AT5G54570 51.463 410 194 4 106 512 1 408 1.37e-150 438
MS.gene032154.t1 AT1G02850 46.584 483 237 8 35 513 21 486 5.76e-150 438
MS.gene032154.t1 AT5G28510 45.473 497 251 8 29 512 30 519 3.69e-149 438
MS.gene032154.t1 AT4G21760 42.248 516 284 7 2 512 15 521 9.87e-149 437
MS.gene032154.t1 AT1G52400 44.294 517 270 10 9 513 6 516 3.50e-148 435
MS.gene032154.t1 AT1G52400 44.294 517 270 10 9 513 6 516 3.50e-148 435
MS.gene032154.t1 AT1G61810 43.411 516 281 7 5 515 1 510 1.08e-147 434
MS.gene032154.t1 AT5G25980 47.484 457 226 7 11 459 17 467 4.15e-147 430
MS.gene032154.t1 AT5G25980 47.484 457 226 7 11 459 17 467 4.15e-147 430
MS.gene032154.t1 AT3G60140 48.649 407 206 3 19 423 7 412 1.38e-145 426
MS.gene032154.t1 AT1G02850 44.664 506 236 9 35 513 21 509 1.59e-145 428
MS.gene032154.t1 AT1G66270 45.892 499 253 10 25 514 22 512 2.64e-144 425
MS.gene032154.t1 AT1G66280 44.847 524 263 10 1 512 1 510 4.60e-144 424
MS.gene032154.t1 AT1G02850 44.773 507 235 10 35 513 21 510 7.10e-144 424
MS.gene032154.t1 AT4G27830 44.398 482 249 7 34 512 19 484 2.98e-143 422
MS.gene032154.t1 AT1G61810 43.625 502 272 7 5 501 1 496 8.22e-143 422
MS.gene032154.t1 AT4G21760 41.473 516 278 8 2 512 15 511 2.01e-142 421
MS.gene032154.t1 AT5G26000 49.883 427 201 7 38 459 38 456 1.35e-141 416
MS.gene032154.t1 AT1G66270 45.691 499 252 11 25 514 22 510 3.62e-141 417
MS.gene032154.t1 AT1G02850 45.135 483 217 9 35 513 21 459 9.75e-139 409
MS.gene032154.t1 AT2G44450 51.977 354 165 2 159 512 1 349 9.35e-138 402
MS.gene032154.t1 AT4G27820 43.827 486 238 8 37 512 22 482 6.37e-137 405
MS.gene032154.t1 AT4G22100 42.460 504 260 10 13 513 7 483 1.81e-135 402
MS.gene032154.t1 AT1G60090 41.386 505 267 10 13 513 4 483 4.25e-134 398
MS.gene032154.t1 AT2G44480 57.508 313 131 2 36 348 64 374 7.36e-134 394
MS.gene032154.t1 AT1G60090 41.061 509 270 11 13 513 4 490 4.54e-132 393
MS.gene032154.t1 AT3G62750 40.837 502 259 10 17 512 4 473 7.82e-132 392
MS.gene032154.t1 AT3G62750 40.837 502 259 10 17 512 30 499 1.49e-131 392
MS.gene032154.t1 AT2G44470 45.750 400 205 5 3 399 1 391 7.60e-129 381
MS.gene032154.t1 AT1G45191 41.807 476 255 8 39 513 30 484 6.32e-128 382
MS.gene032154.t1 AT1G45191 41.719 477 260 8 39 513 30 490 9.27e-127 380
MS.gene032154.t1 AT1G45191 41.701 482 258 8 39 513 30 495 1.25e-126 379
MS.gene032154.t1 AT1G45191 41.260 492 258 9 39 513 30 507 3.06e-125 376
MS.gene032154.t1 AT1G02850 46.265 415 186 7 35 423 21 424 1.63e-122 366
MS.gene032154.t1 AT5G48375 44.196 448 181 9 35 480 35 415 1.64e-121 363
MS.gene032154.t1 AT1G52400 43.612 454 241 8 12 458 15 460 1.76e-121 364
MS.gene032154.t1 AT3G62740 38.235 510 281 9 5 512 1 478 2.14e-121 365
MS.gene032154.t1 AT1G61810 43.632 424 229 6 5 423 1 419 8.95e-119 356
MS.gene032154.t1 AT1G61810 42.857 413 230 5 106 515 1 410 3.26e-117 352
MS.gene032154.t1 AT4G27830 43.659 410 214 6 106 512 1 396 4.28e-116 349
MS.gene032154.t1 AT3G18070 48.442 353 171 7 24 374 18 361 8.47e-116 347
MS.gene032154.t1 AT1G51490 51.009 347 155 6 46 390 28 361 1.22e-115 348
MS.gene032154.t1 AT3G62750 40.000 450 233 9 17 461 30 447 2.56e-113 343
MS.gene032154.t1 AT2G44460 48.189 359 182 4 157 512 1 358 6.37e-112 339
MS.gene032154.t1 AT4G27820 42.686 417 209 7 106 512 1 397 5.96e-110 333
MS.gene032154.t1 AT4G27820 42.686 417 209 7 106 512 1 397 5.96e-110 333
MS.gene032154.t1 AT3G18070 46.951 328 165 6 190 514 100 421 4.72e-106 323
MS.gene032154.t1 AT3G18070 50.649 77 35 2 24 100 18 91 3.22e-15 78.2
MS.gene032154.t1 AT1G60270 42.547 369 193 6 9 374 3 355 5.62e-106 322
MS.gene032154.t1 AT2G44480 47.020 302 159 1 211 512 2 302 1.17e-105 318
MS.gene032154.t1 AT3G62740 37.582 455 251 7 5 458 1 423 3.36e-105 321
MS.gene032154.t1 AT1G61820 43.716 366 201 4 152 514 4 367 2.63e-104 317
MS.gene032154.t1 AT3G62750 40.194 413 216 8 106 512 1 388 4.64e-104 318
MS.gene032154.t1 AT3G62750 40.194 413 216 8 106 512 1 388 4.64e-104 318
MS.gene032154.t1 AT3G62750 41.316 380 201 6 17 392 4 365 2.09e-103 315
MS.gene032154.t1 AT3G62750 41.316 380 201 6 17 392 4 365 2.09e-103 315
MS.gene032154.t1 AT1G45191 43.466 352 189 4 39 390 30 371 3.41e-102 313
MS.gene032154.t1 AT1G45191 44.543 339 178 4 39 377 30 358 5.39e-102 313
MS.gene032154.t1 AT3G62750 43.732 343 175 5 17 359 30 354 6.37e-102 313
MS.gene032154.t1 AT3G18070 46.349 315 160 6 203 514 1 309 2.02e-100 305
MS.gene032154.t1 AT1G61810 48.525 305 150 4 5 307 1 300 7.98e-97 296
MS.gene032154.t1 AT1G60270 44.853 272 143 4 106 374 1 268 3.63e-81 255
MS.gene032154.t1 AT3G18070 45.992 237 124 3 190 424 100 334 1.04e-73 237
MS.gene032154.t1 AT3G18070 50.649 77 35 2 24 100 18 91 1.37e-15 78.6
MS.gene032154.t1 AT3G18070 45.089 224 119 3 203 424 1 222 2.91e-68 219
MS.gene032154.t1 AT5G16580 37.374 297 163 8 178 469 21 299 1.05e-53 183
MS.gene032154.t1 AT3G06510 25.688 436 251 15 101 513 159 544 5.27e-28 118
MS.gene032154.t1 AT3G06510 25.532 423 234 13 101 513 159 510 3.31e-27 115

Find 111 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATTTACATCACCGAAAA+TGG 0.206490 2.4:-5328853 MS.gene032154:intron
AATTGCACTGGTGGTGATTC+AGG 0.216969 2.4:-5330302 MS.gene032154:CDS
CATCATGAGGAATATGAATT+TGG 0.231935 2.4:-5331094 MS.gene032154:CDS
TAACAATGATTACAGGTATA+TGG 0.264543 2.4:-5329372 MS.gene032154:intron
GAAATGCTTACTTGTAATAT+TGG 0.267768 2.4:+5329151 None:intergenic
GAACTTTGTTTCAAAGAGTT+TGG 0.272614 2.4:-5330434 MS.gene032154:CDS
TCAATAGAAGGAAAACTTAA+TGG 0.273460 2.4:-5330937 MS.gene032154:intron
AAGCAAGCAAGACTACTTAA+AGG 0.279217 2.4:-5329275 MS.gene032154:CDS
GTGGGAGAGGAGCAAGTATA+TGG 0.294748 2.4:-5333713 MS.gene032154:CDS
CTGCGGCATGAGCGAGTAAT+TGG 0.296032 2.4:+5330252 None:intergenic
ACCACTTTGCAGACAACTTT+TGG 0.299570 2.4:+5328295 None:intergenic
AGCGTTTCTTCCTATGCATT+AGG 0.313596 2.4:-5330365 MS.gene032154:CDS
CATTTGTAACTCTATTTCAT+TGG 0.317206 2.4:-5330738 MS.gene032154:CDS
ATCACTAGAGGAAGCCCTTA+TGG 0.317497 2.4:-5328630 MS.gene032154:CDS
GGATCTTCCTCAAGCTTTAG+AGG 0.318091 2.4:-5330716 MS.gene032154:CDS
CACCTGGTCGATGTTCTAAA+TGG 0.322789 2.4:-5330334 MS.gene032154:CDS
AGGAAGGGCGTAAATATAAA+AGG 0.324176 2.4:-5328420 MS.gene032154:CDS
CAAAGCATGCGTTCTCTTGT+TGG 0.330045 2.4:-5329323 MS.gene032154:CDS
AACAATTCTTGAATTCCTTT+AGG 0.330476 2.4:+5328907 None:intergenic
GCCAAATCGCATTGCATAAC+CGG 0.338206 2.4:+5328356 None:intergenic
ATCAATGAGTTGTTGGCTAA+TGG 0.340917 2.4:-5330874 MS.gene032154:intron
ATACGTACCCTTGGACCTAT+TGG 0.348989 2.4:+5329033 None:intergenic
CTTACAGATTCTCGATATCT+TGG 0.359339 2.4:-5331068 MS.gene032154:CDS
GGATATTTCCCTCTTGTTAG+TGG 0.359471 2.4:+5329347 None:intergenic
GCGTTTCTTCCTATGCATTA+GGG 0.363132 2.4:-5330364 MS.gene032154:CDS
TCCGGTTATGCAATGCGATT+TGG 0.363198 2.4:-5328357 MS.gene032154:CDS
GAATCTCAAAAGGGTGTGAT+AGG 0.392493 2.4:-5330126 MS.gene032154:CDS
GACAATTTCGAATGGGCATC+CGG 0.398026 2.4:-5328375 MS.gene032154:CDS
CGAGGACTAGACTTCATGTT+TGG 0.401819 2.4:-5330036 MS.gene032154:CDS
AGTGAAGAAACATCAAGAAT+TGG 0.408112 2.4:+5334077 None:intergenic
GTTTCAAAGAGTTTGGAGAT+AGG 0.413061 2.4:-5330427 MS.gene032154:CDS
CAACCTCATCAATGAGTTGT+TGG 0.417491 2.4:-5330881 MS.gene032154:CDS
ATTTGTAACTCTATTTCATT+GGG 0.421248 2.4:-5330737 MS.gene032154:CDS
TGGTTATATGTTTATCCTAA+AGG 0.422005 2.4:-5328922 MS.gene032154:CDS
ACAAGAGAACGCATGCTTTG+TGG 0.424848 2.4:+5329326 None:intergenic
AAAGGGTCATTTGATTTCCT+TGG 0.428442 2.4:-5329257 MS.gene032154:CDS
CTATATATAGGAATCTCAAA+AGG 0.435333 2.4:-5330136 MS.gene032154:intron
TTGGAGATAGGGTGAAGTAT+TGG 0.436696 2.4:-5330415 MS.gene032154:CDS
CAATTCTATAAGTGTCCATA+AGG 0.439939 2.4:+5328615 None:intergenic
CAAGCTTTAGAGGACGAGTA+TGG 0.443501 2.4:-5330706 MS.gene032154:CDS
AGTCTACCATTTCTTAGTTG+TGG 0.446083 2.4:+5329197 None:intergenic
TTTCAAAGAGTTTGGAGATA+GGG 0.449196 2.4:-5330426 MS.gene032154:CDS
TGTAATATTTGACTCCTTCG+TGG 0.449747 2.4:+5330905 None:intergenic
GAGCGCAATGGTATTCCAAT+AGG 0.459542 2.4:-5329048 MS.gene032154:CDS
AGCAAGCAAGACTACTTAAA+GGG 0.462593 2.4:-5329274 MS.gene032154:CDS
TCGACTTTGTTATCAGAAAG+TGG 0.483088 2.4:+5330075 None:intergenic
GCATAACCTTGGTGACTAGT+TGG 0.499925 2.4:-5330104 MS.gene032154:CDS
TGTGTACAAGAAGAAGTATC+AGG 0.501335 2.4:-5330222 MS.gene032154:intron
GACAGCATCCTCAGCATACC+AGG 0.502054 2.4:-5334018 MS.gene032154:intron
CGTTTCTTGACAATTTCGAA+TGG 0.512026 2.4:-5328383 MS.gene032154:CDS
GATGCACCACAACTAAGAAA+TGG 0.512482 2.4:-5329203 MS.gene032154:CDS
GTTTCTTGACAATTTCGAAT+GGG 0.515280 2.4:-5328382 MS.gene032154:CDS
ATTGCACTGGTGGTGATTCA+GGG 0.518485 2.4:-5330301 MS.gene032154:CDS
TGGTGATGGGAAACAATGTA+AGG 0.530661 2.4:+5330272 None:intergenic
CATGAGCGAGTAATTGGTGA+TGG 0.535717 2.4:+5330258 None:intergenic
CAATGAAATAGAGTTACAAA+TGG 0.537102 2.4:+5330739 None:intergenic
TAAATATCGCAGGAAGATGT+TGG 0.541513 2.4:-5331117 MS.gene032154:intron
TACGAAGGTGCTGCAAAAGA+AGG 0.541713 2.4:-5333735 MS.gene032154:CDS
ATTTCTTAGTTGTGGTGCAT+CGG 0.545452 2.4:+5329205 None:intergenic
GCTGCAAAAGAAGGTGGGAG+AGG 0.546750 2.4:-5333726 MS.gene032154:CDS
ACCTACACTCATAAGTATCC+AGG 0.547559 2.4:-5333687 MS.gene032154:intron
GACTAGACTTCATGTTTGGA+TGG 0.550930 2.4:-5330032 MS.gene032154:intron
AATTCTATAAGTGTCCATAA+GGG 0.551405 2.4:+5328616 None:intergenic
TGGGAGAGGAGCAAGTATAT+GGG 0.558573 2.4:-5333712 MS.gene032154:CDS
GAAGAAACGCTGAAAGTGGA+TGG 0.574804 2.4:+5330377 None:intergenic
TATATATAGGAATCTCAAAA+GGG 0.578464 2.4:-5330135 MS.gene032154:intron
TGTATCACTTACACAATGAG+AGG 0.579290 2.4:+5330670 None:intergenic
GATACTTCTTCTTGTACACA+TGG 0.579397 2.4:+5330225 None:intergenic
TGATCAATATTACCGCTACA+AGG 0.580404 2.4:-5332014 MS.gene032154:intron
ATGGTATTCCAATAGGTCCA+AGG 0.582492 2.4:-5329041 MS.gene032154:CDS
TACTCGTCCTCTAAAGCTTG+AGG 0.585027 2.4:+5330709 None:intergenic
ACCAAAAGTTGTCTGCAAAG+TGG 0.587657 2.4:-5328296 MS.gene032154:CDS
TTGTGCAGGCAGCTTCAAGT+TGG 0.594346 2.4:-5328942 MS.gene032154:intron
GTATCACTTACACAATGAGA+GGG 0.594957 2.4:+5330671 None:intergenic
ATGTATAATAGTTTAGTCCA+AGG 0.597397 2.4:+5329240 None:intergenic
TGGAAAGATCCCTAATGCAT+AGG 0.599350 2.4:+5330355 None:intergenic
GCTTCCTCTAGTGATAGTGT+TGG 0.600513 2.4:+5328638 None:intergenic
GAAGGTGCTGCAAAAGAAGG+TGG 0.605367 2.4:-5333732 MS.gene032154:CDS
CTTGTACACATGGGCAGCTG+CGG 0.609892 2.4:+5330235 None:intergenic
AAGATATTAGACAGAAGCAA+CGG 0.610214 2.4:-5332049 MS.gene032154:CDS
AGGAAGATGTTGGCATCATG+AGG 0.610478 2.4:-5331107 MS.gene032154:CDS
ATAGGAAGAAACGCTGAAAG+TGG 0.614354 2.4:+5330373 None:intergenic
TTAAGTTTAACTCACTTGGG+AGG 0.619829 2.4:+5331037 None:intergenic
GGTGAAACAACCTCAGCAGA+TGG 0.623491 2.4:+5334098 None:intergenic
ATGAGCGAGTAATTGGTGAT+GGG 0.628625 2.4:+5330259 None:intergenic
TAGCCAACAACTCATTGATG+AGG 0.631201 2.4:+5330878 None:intergenic
TGGTATTCCAATAGGTCCAA+GGG 0.633354 2.4:-5329040 MS.gene032154:intron
GCATTAGGGATCTTTCCACC+TGG 0.633500 2.4:-5330350 MS.gene032154:CDS
TATATGGAACCACTAACAAG+AGG 0.637187 2.4:-5329356 MS.gene032154:CDS
CAGAAGCAACGGAGATGTCG+CGG 0.639307 2.4:-5332038 MS.gene032154:CDS
AACCATTTAGAACATCGACC+AGG 0.642107 2.4:+5330332 None:intergenic
TGGTTGAGCTCAAATTGCAC+TGG 0.642131 2.4:-5330314 MS.gene032154:CDS
AAGGTGCTGCAAAAGAAGGT+GGG 0.649452 2.4:-5333731 MS.gene032154:CDS
TGATCCAACACTATCACTAG+AGG 0.650665 2.4:-5328642 MS.gene032154:CDS
ATAGAAGGAAAACTTAATGG+AGG 0.654831 2.4:-5330934 MS.gene032154:intron
GCTTTAGAGGACGAGTATGG+CGG 0.657871 2.4:-5330703 MS.gene032154:CDS
GAATATAATAGAGATGACGA+TGG 0.658549 2.4:+5328585 None:intergenic
ATAAATACATTACCTTGTAG+CGG 0.659369 2.4:+5332002 None:intergenic
ATATGGAACCACTAACAAGA+GGG 0.664152 2.4:-5329355 MS.gene032154:CDS
ACCTGGATACTTATGAGTGT+AGG 0.665140 2.4:+5333686 None:intergenic
GGGTGTGATAGGCATAACCT+TGG 0.666466 2.4:-5330115 MS.gene032154:CDS
CACCACGCTACCATCTGCTG+AGG 0.667092 2.4:-5334108 MS.gene032154:CDS
AACCTCAGCAGATGGTAGCG+TGG 0.667761 2.4:+5334106 None:intergenic
TTGAGCTCAAATTGCACTGG+TGG 0.668163 2.4:-5330311 MS.gene032154:CDS
CATTTAGAACATCGACCAGG+TGG 0.673589 2.4:+5330335 None:intergenic
ATACTTCTTCTTGTACACAT+GGG 0.687173 2.4:+5330226 None:intergenic
ATATATATCATGTAGTACGA+AGG 0.690503 2.4:-5333750 MS.gene032154:intron
AATGAACCAACTAGTCACCA+AGG 0.723424 2.4:+5330098 None:intergenic
AATGGAGGTATAAACCACGA+AGG 0.731217 2.4:-5330919 MS.gene032154:CDS
TATTGGCATTAAAATCAGTG+AGG 0.737201 2.4:+5329168 None:intergenic
GTGATGGAAGCTGAGCGCAA+TGG 0.744090 2.4:-5329060 MS.gene032154:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTTAATATTATTTA+TGG + chr2.4:5328975-5328994 None:intergenic 0.0%
!! TTTAAAAATAATAATAATAA+TGG - chr2.4:5328578-5328597 MS.gene032154:CDS 0.0%
!!! AATAATATTAAATATTTTAA+TGG - chr2.4:5328977-5328996 MS.gene032154:intron 0.0%
!! ATAATTATGTAGAATTAAAT+AGG + chr2.4:5331435-5331454 None:intergenic 10.0%
!! GTATTTGAATATTTATTTAT+AGG - chr2.4:5331667-5331686 MS.gene032154:intron 10.0%
!! TAAAAATAGAATTATAACAT+AGG + chr2.4:5330330-5330349 None:intergenic 10.0%
!! TATTTACATAAATATTAGTA+AGG - chr2.4:5331804-5331823 MS.gene032154:intron 10.0%
!!! AAAAATAATAATATTTTACC+TGG + chr2.4:5328439-5328458 None:intergenic 10.0%
!!! AAGAGTATTTTTTTTTTTTT+TGG + chr2.4:5329147-5329166 None:intergenic 10.0%
!!! ATAAATTAAAAACTACATTT+TGG + chr2.4:5328549-5328568 None:intergenic 10.0%
!!! ATACATTTTTATTTTTTTAC+GGG + chr2.4:5330886-5330905 None:intergenic 10.0%
!!! ATTTTAGATTAGTTTTTATA+AGG - chr2.4:5333915-5333934 MS.gene032154:intron 10.0%
!!! ATTTTATTTTTTATTAGGAA+GGG - chr2.4:5334001-5334020 MS.gene032154:intron 10.0%
!!! ATTTTTTTTTTTTTTTGTGA+TGG - chr2.4:5333360-5333379 MS.gene032154:intron 10.0%
!!! TATTTTATTTTTTATTAGGA+AGG - chr2.4:5334000-5334019 MS.gene032154:intron 10.0%
!!! TTTTAAGTGTATATATATTT+AGG - chr2.4:5333453-5333472 MS.gene032154:intron 10.0%
!!! TTTTAGATTAGTTTTTATAA+GGG - chr2.4:5333916-5333935 MS.gene032154:intron 10.0%
!!! TTTTTGAAAACTTAATTTTT+AGG - chr2.4:5333756-5333775 MS.gene032154:intron 10.0%
!!! TTTTTTAAAAGATAAATACA+AGG - chr2.4:5330935-5330954 MS.gene032154:intron 10.0%
!! AAATGCTATTAAAATTAAGT+AGG + chr2.4:5329835-5329816 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + chr2.4:5329836-5329817 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+TGG - chr2.4:5329817-5329836 MS.gene032154:intron 15.0%
!! AGATAAAAAGTAATAAAATC+TGG - chr2.4:5329625-5329644 MS.gene032154:intron 15.0%
!! ATTTATCTCTATAATTAGTT+GGG - chr2.4:5332974-5332993 MS.gene032154:intron 15.0%
!! CAGATAAATTATAATAATAG+AGG + chr2.4:5330291-5330310 None:intergenic 15.0%
!! TATAATTAAGTTATGACTTT+CGG + chr2.4:5330077-5330096 None:intergenic 15.0%
!! TATTTATCTCTATAATTAGT+TGG - chr2.4:5332973-5332992 MS.gene032154:intron 15.0%
!! TATTTATGTAAATATGATCT+AGG + chr2.4:5331798-5331817 None:intergenic 15.0%
!! TCATCATTCTTAATATTATA+GGG + chr2.4:5330482-5330501 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG + chr2.4:5329744-5329725 None:intergenic 15.0%
!! TTCATCATTCTTAATATTAT+AGG + chr2.4:5330483-5330502 None:intergenic 15.0%
!! TTTAATAAACTATCAATAGA+AGG - chr2.4:5331487-5331506 MS.gene032154:intron 15.0%
!!! ATGTTGTTTCAAAAAAAATA+TGG - chr2.4:5331277-5331296 MS.gene032154:intron 15.0%
!!! ATGTTTTGTTATTATTTACA+AGG - chr2.4:5329329-5329348 MS.gene032154:CDS 15.0%
!!! CATATAGTTATAAACTATTT+TGG + chr2.4:5332596-5332615 None:intergenic 15.0%
!!! TATTATTATTGTTTTGCTAT+TGG - chr2.4:5329186-5329205 MS.gene032154:CDS 15.0%
!!! TGTTTTGTTATTATTTACAA+GGG - chr2.4:5329330-5329349 MS.gene032154:CDS 15.0%
!! AAACAAATTTGAATTGAGTA+GGG - chr2.4:5329755-5329774 MS.gene032154:intron 20.0%
!! AAATTCAAGTAAACTAAGTA+TGG + chr2.4:5331593-5331612 None:intergenic 20.0%
!! AATATTGTTAAAAAATCCAG+TGG - chr2.4:5330710-5330729 MS.gene032154:CDS 20.0%
!! ACAACATTAAATGTAAACAA+AGG - chr2.4:5331645-5331664 MS.gene032154:intron 20.0%
!! ATAAAGATAATGAGATTCAA+TGG - chr2.4:5331169-5331188 MS.gene032154:intron 20.0%
!! ATATTACGTTATAGAAAATC+TGG - chr2.4:5328460-5328479 MS.gene032154:intron 20.0%
!! ATTTGTAACTCTATTTCATT+GGG - chr2.4:5331699-5331718 MS.gene032154:intron 20.0%
!! CATCATTCTTAATATTATAG+GGG + chr2.4:5330481-5330500 None:intergenic 20.0%
!! CCAAAAAATGATCTATATAT+AGG - chr2.4:5332288-5332307 MS.gene032154:intron 20.0%
!! GCAAAAAGATAATTTAAACA+AGG - chr2.4:5329012-5329031 MS.gene032154:intron 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - chr2.4:5329754-5329773 MS.gene032154:intron 20.0%
!! TACAAAGTTATAATATGTTG+TGG + chr2.4:5333430-5333449 None:intergenic 20.0%
!! TACAGAATGATCAATAAATA+AGG + chr2.4:5333310-5333329 None:intergenic 20.0%
!! TATATATAGGAATCTCAAAA+GGG - chr2.4:5332301-5332320 MS.gene032154:intron 20.0%
!! TATTTGAATTCAATTTCAGT+CGG - chr2.4:5328522-5328541 MS.gene032154:intron 20.0%
!! TGGTACTTTATCATATATAT+AGG - chr2.4:5332795-5332814 MS.gene032154:intron 20.0%
!! TTAATATTATTTATGGTCGT+AGG + chr2.4:5328968-5328987 None:intergenic 20.0%
!! TTGAATTCAAATATGTAAGA+AGG + chr2.4:5328515-5328534 None:intergenic 20.0%
!!! AAGTTGCAAATCAAATTTTA+TGG - chr2.4:5330042-5330061 MS.gene032154:CDS 20.0%
!!! AATTACTTTACTAGTTTTCA+GGG + chr2.4:5331146-5331165 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG - chr2.4:5329660-5329679 MS.gene032154:intron 20.0%
!!! AATTTTGTGGATTACAAAAA+TGG - chr2.4:5334106-5334125 MS.gene032154:CDS 20.0%
!!! ACATTTGTTTTATTGGTAAA+AGG + chr2.4:5330354-5330373 None:intergenic 20.0%
!!! ACGACTTTGATTTAATTAAA+AGG - chr2.4:5328888-5328907 MS.gene032154:CDS 20.0%
!!! ATATAAAAGGATATTTTGCA+TGG - chr2.4:5334029-5334048 MS.gene032154:CDS 20.0%
!!! ATGTTGAACATTTGTTTTAT+TGG + chr2.4:5330361-5330380 None:intergenic 20.0%
!!! CCTATATATAGATCATTTTT+TGG + chr2.4:5332291-5332310 None:intergenic 20.0%
!!! CGACTTTGATTTAATTAAAA+GGG - chr2.4:5328889-5328908 MS.gene032154:CDS 20.0%
!!! GTTACTAACTTTTATTTTGA+AGG + chr2.4:5330213-5330232 None:intergenic 20.0%
!!! TAATTACTTTACTAGTTTTC+AGG + chr2.4:5331147-5331166 None:intergenic 20.0%
!!! TAGATCATTTTTTGGTTATT+AGG + chr2.4:5332283-5332302 None:intergenic 20.0%
!!! TTGGGCTATAATTTTTTTTT+AGG - chr2.4:5331064-5331083 MS.gene032154:CDS 20.0%
! AACAATTCTTGAATTCCTTT+AGG + chr2.4:5333532-5333551 None:intergenic 25.0%
! AACTAACAACAAACATTTCA+TGG + chr2.4:5332848-5332867 None:intergenic 25.0%
! AATTCAATCCGAAAAATAGA+TGG + chr2.4:5328787-5328806 None:intergenic 25.0%
! AATTCTATAAGTGTCCATAA+GGG + chr2.4:5333823-5333842 None:intergenic 25.0%
! AGCATTAATATCATAATCCA+TGG - chr2.4:5331946-5331965 MS.gene032154:intron 25.0%
! AGTGCAGAAAAACAAAATTA+GGG - chr2.4:5329788-5329807 MS.gene032154:intron 25.0%
! ATAAATACATTACCTTGTAG+CGG + chr2.4:5330437-5330456 None:intergenic 25.0%
! ATAGAACAAATCCTTGATTA+AGG + chr2.4:5332656-5332675 None:intergenic 25.0%
! ATATATATCATGTAGTACGA+AGG - chr2.4:5328686-5328705 MS.gene032154:intron 25.0%
! ATGTATAATAGTTTAGTCCA+AGG + chr2.4:5333199-5333218 None:intergenic 25.0%
! ATTGTTCAATTCAATTACCT+TGG + chr2.4:5328651-5328670 None:intergenic 25.0%
! CAATGAAATAGAGTTACAAA+TGG + chr2.4:5331700-5331719 None:intergenic 25.0%
! CATTTGTAACTCTATTTCAT+TGG - chr2.4:5331698-5331717 MS.gene032154:intron 25.0%
! CTATATATAGGAATCTCAAA+AGG - chr2.4:5332300-5332319 MS.gene032154:intron 25.0%
! CTATTTGTAACAATGATTAC+AGG - chr2.4:5333057-5333076 MS.gene032154:intron 25.0%
! GAAATGCTTACTTGTAATAT+TGG + chr2.4:5333288-5333307 None:intergenic 25.0%
! GAATACTAGTTAGATATAGT+TGG - chr2.4:5332448-5332467 MS.gene032154:intron 25.0%
! GGTAATTGAATTGAACAATT+TGG - chr2.4:5328652-5328671 MS.gene032154:CDS 25.0%
! TAAATACAATGCTAGAAAGA+TGG + chr2.4:5332959-5332978 None:intergenic 25.0%
! TAACAATGATTACAGGTATA+TGG - chr2.4:5333064-5333083 MS.gene032154:intron 25.0%
! TATGATCAAAATCATGAACA+AGG - chr2.4:5330454-5330473 MS.gene032154:CDS 25.0%
! TCAATAGAAGGAAAACTTAA+TGG - chr2.4:5331499-5331518 MS.gene032154:intron 25.0%
! TCATTGAAATAATGAAGTAC+CGG + chr2.4:5328490-5328509 None:intergenic 25.0%
! TGGTTATATGTTTATCCTAA+AGG - chr2.4:5333514-5333533 MS.gene032154:intron 25.0%
! TTAAAGAAGTTAGAACTTAG+TGG - chr2.4:5332498-5332517 MS.gene032154:intron 25.0%
!! ATCAAATTTTATGGAATGAG+AGG - chr2.4:5330051-5330070 MS.gene032154:CDS 25.0%
!! CTATCTTATGAAAGGTTTTA+TGG + chr2.4:5330804-5330823 None:intergenic 25.0%
!! GTTTGAAATTATATTTGTGC+AGG - chr2.4:5333480-5333499 MS.gene032154:intron 25.0%
!! TCATTTCTAAAAATAAGCCA+TGG + chr2.4:5331966-5331985 None:intergenic 25.0%
!!! AAATGATTTTCAAGACTATG+CGG - chr2.4:5331980-5331999 MS.gene032154:intron 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG + chr2.4:5329465-5329484 None:intergenic 25.0%
!!! AGAAAGGACTATTTTTCTTT+TGG - chr2.4:5329069-5329088 MS.gene032154:intron 25.0%
!!! AGTTATAAACTATTTTGGAG+CGG + chr2.4:5332591-5332610 None:intergenic 25.0%
!!! ATAAAGTACCATTTCAGTTT+TGG + chr2.4:5332786-5332805 None:intergenic 25.0%
!!! ATCGCTTTTTATTATGATCT+TGG + chr2.4:5332887-5332906 None:intergenic 25.0%
!!! ATTTGAGAAGCACTATTATA+AGG - chr2.4:5330125-5330144 MS.gene032154:CDS 25.0%
!!! CTAGTTTTCTATCTTATGAA+AGG + chr2.4:5330812-5330831 None:intergenic 25.0%
!!! GAAAGGACTATTTTTCTTTT+GGG - chr2.4:5329070-5329089 MS.gene032154:intron 25.0%
!!! GAGAGAACATTTTAATTTGA+CGG - chr2.4:5330006-5330025 MS.gene032154:intron 25.0%
!!! TAAAGTACCATTTCAGTTTT+GGG + chr2.4:5332785-5332804 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG + chr2.4:5329466-5329485 None:intergenic 25.0%
!!! TAGTATTGTTGCTTTTTGAT+TGG + chr2.4:5331926-5331945 None:intergenic 25.0%
!!! TGATTTCTCCATCTATTTTT+CGG - chr2.4:5328776-5328795 MS.gene032154:intron 25.0%
!!! TTTGAGAAGCACTATTATAA+GGG - chr2.4:5330126-5330145 MS.gene032154:CDS 25.0%
AAAATAGTAACCAATTGCAG+GGG + chr2.4:5331215-5331234 None:intergenic 30.0%
AAAATGTGATCTCTTCATCA+AGG - chr2.4:5332702-5332721 MS.gene032154:intron 30.0%
AAAGTTCATGATTGTTTGTG+AGG - chr2.4:5330544-5330563 MS.gene032154:intron 30.0%
AAATCACTACCGTATACATT+AGG - chr2.4:5330989-5331008 MS.gene032154:intron 30.0%
AAGATATTAGACAGAAGCAA+CGG - chr2.4:5330387-5330406 MS.gene032154:CDS 30.0%
AATACATAACTACCCTAATG+AGG + chr2.4:5331883-5331902 None:intergenic 30.0%
AATATTGATGTGTATAGCAC+TGG - chr2.4:5329918-5329937 MS.gene032154:intron 30.0%
ACAAAATAGTAACCAATTGC+AGG + chr2.4:5331217-5331236 None:intergenic 30.0%
AGTGAAGAAACATCAAGAAT+TGG + chr2.4:5328362-5328381 None:intergenic 30.0%
AGTGCTATACACATCAATAT+TGG + chr2.4:5329919-5329938 None:intergenic 30.0%
ATACTTCTTCTTGTACACAT+GGG + chr2.4:5332213-5332232 None:intergenic 30.0%
ATAGAAGGAAAACTTAATGG+AGG - chr2.4:5331502-5331521 MS.gene032154:intron 30.0%
CAAAATAGTAACCAATTGCA+GGG + chr2.4:5331216-5331235 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG - chr2.4:5329528-5329547 MS.gene032154:intron 30.0%
CAATTCTATAAGTGTCCATA+AGG + chr2.4:5333824-5333843 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG - chr2.4:5329787-5329806 MS.gene032154:intron 30.0%
CATAAGATAGAAAACTAGCA+GGG - chr2.4:5330814-5330833 MS.gene032154:intron 30.0%
CATCATGAGGAATATGAATT+TGG - chr2.4:5331342-5331361 MS.gene032154:intron 30.0%
CATTAGGGTAGTTATGTATT+TGG - chr2.4:5331883-5331902 MS.gene032154:intron 30.0%
GAATATAATAGAGATGACGA+TGG + chr2.4:5333854-5333873 None:intergenic 30.0%
GTATATGAAGATCCTCATTA+GGG - chr2.4:5331868-5331887 MS.gene032154:intron 30.0%
GTTATACACTTAAATATCGC+AGG - chr2.4:5331309-5331328 MS.gene032154:intron 30.0%
GTTTCTTGACAATTTCGAAT+GGG - chr2.4:5334054-5334073 MS.gene032154:CDS 30.0%
TAACACATAGCAGTACTATT+GGG - chr2.4:5331046-5331065 MS.gene032154:intron 30.0%
TAACATAGGTGCATCTAATA+TGG + chr2.4:5330316-5330335 None:intergenic 30.0%
TAGATGGTATATCATCACTT+CGG - chr2.4:5330662-5330681 MS.gene032154:intron 30.0%
TATTGGCATTAAAATCAGTG+AGG + chr2.4:5333271-5333290 None:intergenic 30.0%
TCATAAGATAGAAAACTAGC+AGG - chr2.4:5330813-5330832 MS.gene032154:intron 30.0%
TGATTTCTTCTAGTCAAGAA+AGG - chr2.4:5329053-5329072 MS.gene032154:CDS 30.0%
TGTATATGAAGATCCTCATT+AGG - chr2.4:5331867-5331886 MS.gene032154:intron 30.0%
TTGATTTACATCACCGAAAA+TGG - chr2.4:5333583-5333602 MS.gene032154:intron 30.0%
TTTATAAGGGTTTCTTAGAG+TGG - chr2.4:5333929-5333948 MS.gene032154:intron 30.0%
TTTCAAAGAGTTTGGAGATA+GGG - chr2.4:5332010-5332029 MS.gene032154:intron 30.0%
! AAGTATGGACTAAACTTACA+AGG - chr2.4:5329832-5329851 MS.gene032154:intron 30.0%
! ACCAAGTTTAAGTTAAACCA+AGG - chr2.4:5328631-5328650 MS.gene032154:CDS 30.0%
! ACCTTGGTTTAACTTAAACT+TGG + chr2.4:5328635-5328654 None:intergenic 30.0%
! CGTTTAAGTTTAACTCACTT+GGG + chr2.4:5331405-5331424 None:intergenic 30.0%
! GAACTTTGTTTCAAAGAGTT+TGG - chr2.4:5332002-5332021 MS.gene032154:intron 30.0%
! TAAAGCGTGTTTACCATTTT+CGG + chr2.4:5333599-5333618 None:intergenic 30.0%
! TCGTTTAAGTTTAACTCACT+TGG + chr2.4:5331406-5331425 None:intergenic 30.0%
! TGGTTTAACTTAAACTTGGT+GGG + chr2.4:5328631-5328650 None:intergenic 30.0%
! TTGGTTTAACTTAAACTTGG+TGG + chr2.4:5328632-5328651 None:intergenic 30.0%
! TTTCCCACAAACTTCATTTT+TGG - chr2.4:5328395-5328414 MS.gene032154:CDS 30.0%
! TTTGAGGTTCCTAATGTATA+CGG + chr2.4:5331001-5331020 None:intergenic 30.0%
! TTTTCGGTGATGTAAATCAA+AGG + chr2.4:5333583-5333602 None:intergenic 30.0%
!! AAAGTACCATTTCAGTTTTG+GGG + chr2.4:5332784-5332803 None:intergenic 30.0%
!! TACAAGGTATCGTATATAAG+CGG - chr2.4:5330951-5330970 MS.gene032154:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr2.4:5329848-5329867 MS.gene032154:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr2.4:5329867-5329848 None:intergenic 30.0%
!! TACACATCAATATTGGTTTG+TGG + chr2.4:5329912-5329931 None:intergenic 30.0%
!! TAGAAAGAGTACCTTAATCA+AGG - chr2.4:5332642-5332661 MS.gene032154:intron 30.0%
!! TGAAGAGATCACATTTTGAT+AGG + chr2.4:5332699-5332718 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr2.4:5329847-5329866 MS.gene032154:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr2.4:5329866-5329847 None:intergenic 30.0%
!! TTCCCACAAACTTCATTTTT+GGG - chr2.4:5328396-5328415 MS.gene032154:CDS 30.0%
AAGCAAGCAAGACTACTTAA+AGG - chr2.4:5333161-5333180 MS.gene032154:intron 35.0%
AAGTAGGGACTAAACTTACA+AGG + chr2.4:5329389-5329408 None:intergenic 35.0%
AATTCAATATCCCCTGCAAT+TGG - chr2.4:5331202-5331221 MS.gene032154:intron 35.0%
ACAATGCTAGAAAGATGGAT+TGG + chr2.4:5332954-5332973 None:intergenic 35.0%
AGCAAGCAAGACTACTTAAA+GGG - chr2.4:5333162-5333181 MS.gene032154:intron 35.0%
AGTCTACCATTTCTTAGTTG+TGG + chr2.4:5333242-5333261 None:intergenic 35.0%
ATATGGAACCACTAACAAGA+GGG - chr2.4:5333081-5333100 MS.gene032154:intron 35.0%
ATTTCTTAGTTGTGGTGCAT+CGG + chr2.4:5333234-5333253 None:intergenic 35.0%
CAATAGTACTGCTATGTGTT+AGG + chr2.4:5331047-5331066 None:intergenic 35.0%
CGTTTCTTGACAATTTCGAA+TGG - chr2.4:5334053-5334072 MS.gene032154:CDS 35.0%
CTAACACATAGCAGTACTAT+TGG - chr2.4:5331045-5331064 MS.gene032154:intron 35.0%
CTTACAGATTCTCGATATCT+TGG - chr2.4:5331368-5331387 MS.gene032154:intron 35.0%
GATACTTCTTCTTGTACACA+TGG + chr2.4:5332214-5332233 None:intergenic 35.0%
GGTGAACGTGTTTGTAAATA+GGG + chr2.4:5329891-5329910 None:intergenic 35.0%
GTATCACTTACACAATGAGA+GGG + chr2.4:5331768-5331787 None:intergenic 35.0%
GTCCCAAAAATGAAGTTTGT+GGG + chr2.4:5328401-5328420 None:intergenic 35.0%
GTTTCAAAGAGTTTGGAGAT+AGG - chr2.4:5332009-5332028 MS.gene032154:intron 35.0%
TAAAATGTTCTCTCAGAGAG+AGG + chr2.4:5330000-5330019 None:intergenic 35.0%
TAAATATCGCAGGAAGATGT+TGG - chr2.4:5331319-5331338 MS.gene032154:intron 35.0%
TATATAAGCGGTACATCCAA+AGG - chr2.4:5330963-5330982 MS.gene032154:intron 35.0%
TATATGGAACCACTAACAAG+AGG - chr2.4:5333080-5333099 MS.gene032154:intron 35.0%
TCACAGTTCACATTTCAAGA+AGG + chr2.4:5330167-5330186 None:intergenic 35.0%
TGATCAATATTACCGCTACA+AGG - chr2.4:5330422-5330441 MS.gene032154:CDS 35.0%
TGGTGAACGTGTTTGTAAAT+AGG + chr2.4:5329892-5329911 None:intergenic 35.0%
TGTAATATTTGACTCCTTCG+TGG + chr2.4:5331534-5331553 None:intergenic 35.0%
TGTATCACTTACACAATGAG+AGG + chr2.4:5331769-5331788 None:intergenic 35.0%
TGTCCCAAAAATGAAGTTTG+TGG + chr2.4:5328402-5328421 None:intergenic 35.0%
TGTCTTCAGTCTAGCAATAT+AGG + chr2.4:5330595-5330614 None:intergenic 35.0%
TTAAGTTTAACTCACTTGGG+AGG + chr2.4:5331402-5331421 None:intergenic 35.0%
TTGTATGTGTGGGTATTAGA+TGG - chr2.4:5330646-5330665 MS.gene032154:intron 35.0%
! AAAGGGTCATTTGATTTCCT+TGG - chr2.4:5333179-5333198 MS.gene032154:intron 35.0%
! AGGAAGGGCGTAAATATAAA+AGG - chr2.4:5334016-5334035 MS.gene032154:intron 35.0%
! ATATTTTACCTGGTATGCTG+AGG + chr2.4:5328429-5328448 None:intergenic 35.0%
! ATCAATGAGTTGTTGGCTAA+TGG - chr2.4:5331562-5331581 MS.gene032154:intron 35.0%
! TCGACTTTGTTATCAGAAAG+TGG + chr2.4:5332364-5332383 None:intergenic 35.0%
! TGTTAGGTGAGTGTGTTTTT+GGG + chr2.4:5331031-5331050 None:intergenic 35.0%
!! CATTTTGATAGGAGTAAGAG+TGG + chr2.4:5332688-5332707 None:intergenic 35.0%
!! TGAAATAATGAAGTACCGGT+CGG + chr2.4:5328486-5328505 None:intergenic 35.0%
!! TGTGTACAAGAAGAAGTATC+AGG - chr2.4:5332214-5332233 MS.gene032154:intron 35.0%
!!! AGATGGATTGGTTTTGGAAT+TGG + chr2.4:5332942-5332961 None:intergenic 35.0%
!!! CTAGAAAGATGGATTGGTTT+TGG + chr2.4:5332948-5332967 None:intergenic 35.0%
!!! TTTTTTTTAGGCCCATGTCT+TGG - chr2.4:5331076-5331095 MS.gene032154:CDS 35.0%
AATGAACCAACTAGTCACCA+AGG + chr2.4:5332341-5332360 None:intergenic 40.0%
ACCAAAAGTTGTCTGCAAAG+TGG - chr2.4:5334140-5334159 MS.gene032154:CDS 40.0%
ACCTACACTCATAAGTATCC+AGG - chr2.4:5328749-5328768 MS.gene032154:intron 40.0%
ACCTGGATACTTATGAGTGT+AGG + chr2.4:5328753-5328772 None:intergenic 40.0%
AGATGGAGAAATCAGATACC+TGG + chr2.4:5328770-5328789 None:intergenic 40.0%
AGCGTTTCTTCCTATGCATT+AGG - chr2.4:5332071-5332090 MS.gene032154:intron 40.0%
ATAGGAAGAAACGCTGAAAG+TGG + chr2.4:5332066-5332085 None:intergenic 40.0%
ATGGTATTCCAATAGGTCCA+AGG - chr2.4:5333395-5333414 MS.gene032154:intron 40.0%
CAACCTCATCAATGAGTTGT+TGG - chr2.4:5331555-5331574 MS.gene032154:intron 40.0%
CACCTCATAGTTGTATGTGT+GGG - chr2.4:5330636-5330655 MS.gene032154:intron 40.0%
CAGTCTAGCAATATAGGCAT+TGG + chr2.4:5330589-5330608 None:intergenic 40.0%
CGCTATGTTATTCTGCTCAA+TGG - chr2.4:5329955-5329974 MS.gene032154:intron 40.0%
CTAGACTGAAGACATTCATC+CGG - chr2.4:5330601-5330620 MS.gene032154:intron 40.0%
GACTAGACTTCATGTTTGGA+TGG - chr2.4:5332404-5332423 MS.gene032154:intron 40.0%
GATGCACCACAACTAAGAAA+TGG - chr2.4:5333233-5333252 MS.gene032154:intron 40.0%
GCGTTTCTTCCTATGCATTA+GGG - chr2.4:5332072-5332091 MS.gene032154:intron 40.0%
GGATATTTCCCTCTTGTTAG+TGG + chr2.4:5333092-5333111 None:intergenic 40.0%
GTAAGTGCTTAACTCTACAC+TGG - chr2.4:5332426-5332445 MS.gene032154:intron 40.0%
TACCCACACATACAACTATG+AGG + chr2.4:5330641-5330660 None:intergenic 40.0%
TAGACTGAAGACATTCATCC+GGG - chr2.4:5330602-5330621 MS.gene032154:intron 40.0%
TAGCCAACAACTCATTGATG+AGG + chr2.4:5331561-5331580 None:intergenic 40.0%
TGATCCAACACTATCACTAG+AGG - chr2.4:5333794-5333813 MS.gene032154:intron 40.0%
TGGAAAGATCCCTAATGCAT+AGG + chr2.4:5332084-5332103 None:intergenic 40.0%
TGGTATTCCAATAGGTCCAA+GGG - chr2.4:5333396-5333415 MS.gene032154:intron 40.0%
TTATAGAAAATCTGGCCGAC+CGG - chr2.4:5328468-5328487 MS.gene032154:intron 40.0%
TTGGAGATAGGGTGAAGTAT+TGG - chr2.4:5332021-5332040 MS.gene032154:CDS 40.0%
! AACCATTTAGAACATCGACC+AGG + chr2.4:5332107-5332126 None:intergenic 40.0%
! AATGGAGGTATAAACCACGA+AGG - chr2.4:5331517-5331536 MS.gene032154:intron 40.0%
! ACCACTTTGCAGACAACTTT+TGG + chr2.4:5334144-5334163 None:intergenic 40.0%
! ACGGTAGTGATTTTCACCTT+TGG + chr2.4:5330982-5331001 None:intergenic 40.0%
! ATGAGCGAGTAATTGGTGAT+GGG + chr2.4:5332180-5332199 None:intergenic 40.0%
! GAATCTCAAAAGGGTGTGAT+AGG - chr2.4:5332310-5332329 MS.gene032154:intron 40.0%
! GTGTTAGGTGAGTGTGTTTT+TGG + chr2.4:5331032-5331051 None:intergenic 40.0%
!! GCGATTTGGCATGAATTTTG+TGG - chr2.4:5334093-5334112 MS.gene032154:CDS 40.0%
!! TGGTGATGGGAAACAATGTA+AGG + chr2.4:5332167-5332186 None:intergenic 40.0%
!!! ACTTTACTAGTTTTCAGGGC+CGG + chr2.4:5331142-5331161 None:intergenic 40.0%
!!! GCTTGCTTTTTAGAGAACTC+TGG + chr2.4:5333149-5333168 None:intergenic 40.0%
AACTGAGCCTCCGAATTAGT+AGG + chr2.4:5330845-5330864 None:intergenic 45.0%
ACAAGAGAACGCATGCTTTG+TGG + chr2.4:5333113-5333132 None:intergenic 45.0%
AGCCTCCGAATTAGTAGGAA+CGG + chr2.4:5330840-5330859 None:intergenic 45.0%
AGGAAGATGTTGGCATCATG+AGG - chr2.4:5331329-5331348 MS.gene032154:intron 45.0%
ATACGTACCCTTGGACCTAT+TGG + chr2.4:5333406-5333425 None:intergenic 45.0%
ATCACTAGAGGAAGCCCTTA+TGG - chr2.4:5333806-5333825 MS.gene032154:intron 45.0%
CAAAGCATGCGTTCTCTTGT+TGG - chr2.4:5333113-5333132 MS.gene032154:intron 45.0%
CACATACAACTATGAGGTGC+CGG + chr2.4:5330635-5330654 None:intergenic 45.0%
CATGAGCGAGTAATTGGTGA+TGG + chr2.4:5332181-5332200 None:intergenic 45.0%
CATTCATCCGGGTTTGAATC+CGG - chr2.4:5330613-5330632 MS.gene032154:intron 45.0%
CGAGGACTAGACTTCATGTT+TGG - chr2.4:5332400-5332419 MS.gene032154:intron 45.0%
CTCCTTGGATTTGCACCTAA+CGG - chr2.4:5332754-5332773 MS.gene032154:intron 45.0%
GAAGAAACGCTGAAAGTGGA+TGG + chr2.4:5332062-5332081 None:intergenic 45.0%
GACAATTTCGAATGGGCATC+CGG - chr2.4:5334061-5334080 MS.gene032154:CDS 45.0%
GAGCGCAATGGTATTCCAAT+AGG - chr2.4:5333388-5333407 MS.gene032154:intron 45.0%
GATCAAAAAGCTGCTGAACG+AGG - chr2.4:5332382-5332401 MS.gene032154:intron 45.0%
GCACCTCATAGTTGTATGTG+TGG - chr2.4:5330635-5330654 MS.gene032154:intron 45.0%
GCCAAATCGCATTGCATAAC+CGG + chr2.4:5334083-5334102 None:intergenic 45.0%
GGTAGACCCCAAAACTGAAA+TGG - chr2.4:5332775-5332794 MS.gene032154:intron 45.0%
TACCGTTAGGTGCAAATCCA+AGG + chr2.4:5332759-5332778 None:intergenic 45.0%
TCCGGTTATGCAATGCGATT+TGG - chr2.4:5334079-5334098 MS.gene032154:CDS 45.0%
TGGGAGAGGAGCAAGTATAT+GGG - chr2.4:5328724-5328743 MS.gene032154:intron 45.0%
TGGTTGAGCTCAAATTGCAC+TGG - chr2.4:5332122-5332141 MS.gene032154:intron 45.0%
TGTTGTGGTATACGTACCCT+TGG + chr2.4:5333415-5333434 None:intergenic 45.0%
TTGAGCTCAAATTGCACTGG+TGG - chr2.4:5332125-5332144 MS.gene032154:intron 45.0%
! AATTGCACTGGTGGTGATTC+AGG - chr2.4:5332134-5332153 MS.gene032154:intron 45.0%
! ATTGCACTGGTGGTGATTCA+GGG - chr2.4:5332135-5332154 MS.gene032154:intron 45.0%
! CACCTGGTCGATGTTCTAAA+TGG - chr2.4:5332102-5332121 MS.gene032154:intron 45.0%
! CATTTAGAACATCGACCAGG+TGG + chr2.4:5332104-5332123 None:intergenic 45.0%
! GCATAACCTTGGTGACTAGT+TGG - chr2.4:5332332-5332351 MS.gene032154:intron 45.0%
! GCTTCCTCTAGTGATAGTGT+TGG + chr2.4:5333801-5333820 None:intergenic 45.0%
! GGATCTTCCTCAAGCTTTAG+AGG - chr2.4:5331720-5331739 MS.gene032154:intron 45.0%
! GTCGATTTCGTATCATCCAC+TGG + chr2.4:5330729-5330748 None:intergenic 45.0%
!! AAGGTGCTGCAAAAGAAGGT+GGG - chr2.4:5328705-5328724 MS.gene032154:intron 45.0%
!! AGCAATATAGGCATTGGCGT+TGG + chr2.4:5330583-5330602 None:intergenic 45.0%
!! CAAGCTTTAGAGGACGAGTA+TGG - chr2.4:5331730-5331749 MS.gene032154:intron 45.0%
!! TACGAAGGTGCTGCAAAAGA+AGG - chr2.4:5328701-5328720 MS.gene032154:intron 45.0%
!! TACTCGTCCTCTAAAGCTTG+AGG + chr2.4:5331730-5331749 None:intergenic 45.0%
!!! AGGTGAGTGTGTTTTTGGGA+GGG + chr2.4:5331027-5331046 None:intergenic 45.0%
!!! TAGGTGAGTGTGTTTTTGGG+AGG + chr2.4:5331028-5331047 None:intergenic 45.0%
!! AGTAAAAAATATATTATATT+TGG + chr2.4:5330759-5330778 None:intergenic 5.0%
!!! AATACATTTTTATTTTTTTA+CGG + chr2.4:5330887-5330906 None:intergenic 5.0%
!!! ATAAGTAAATTTTTTTTATA+GGG + chr2.4:5329433-5329452 None:intergenic 5.0%
!!! GATTTATTTTATTTTTTATT+AGG - chr2.4:5333996-5334015 MS.gene032154:intron 5.0%
!!! TATAAGTAAATTTTTTTTAT+AGG + chr2.4:5329434-5329453 None:intergenic 5.0%
AGGTGCAAATCCAAGGAGGT+CGG + chr2.4:5332752-5332771 None:intergenic 50.0%
ATTCGGAGGCTCAGTTCTGT+AGG - chr2.4:5330849-5330868 MS.gene032154:intron 50.0%
CAGGGCCGTTCCTACTAATT+CGG - chr2.4:5330832-5330851 MS.gene032154:intron 50.0%
CGTTAGGTGCAAATCCAAGG+AGG + chr2.4:5332756-5332775 None:intergenic 50.0%
CTTCATCAAGGAGTCACTCC+TGG - chr2.4:5332714-5332733 MS.gene032154:intron 50.0%
GCAAACCGCTCAATGGAACT+GGG + chr2.4:5331107-5331126 None:intergenic 50.0%
GCATTAGGGATCTTTCCACC+TGG - chr2.4:5332086-5332105 MS.gene032154:intron 50.0%
GGGTGTGATAGGCATAACCT+TGG - chr2.4:5332321-5332340 MS.gene032154:intron 50.0%
GGTGAAACAACCTCAGCAGA+TGG + chr2.4:5328341-5328360 None:intergenic 50.0%
GTGGGAGAGGAGCAAGTATA+TGG - chr2.4:5328723-5328742 MS.gene032154:intron 50.0%
TGCAAACCGCTCAATGGAAC+TGG + chr2.4:5331108-5331127 None:intergenic 50.0%
TTGTGCAGGCAGCTTCAAGT+TGG - chr2.4:5333494-5333513 MS.gene032154:intron 50.0%
TTTAGGCCCATGTCTTGGAG+AGG - chr2.4:5331081-5331100 MS.gene032154:CDS 50.0%
!! GAAGGTGCTGCAAAAGAAGG+TGG - chr2.4:5328704-5328723 MS.gene032154:intron 50.0%
!! GCTTTAGAGGACGAGTATGG+CGG - chr2.4:5331733-5331752 MS.gene032154:intron 50.0%
!! GTTTTTGGGAGGGTGGTTTG+AGG + chr2.4:5331017-5331036 None:intergenic 50.0%
!!! CAGTTTTGGGGTCTACCGTT+AGG + chr2.4:5332772-5332791 None:intergenic 50.0%
!!! TGAGTGTGTTTTTGGGAGGG+TGG + chr2.4:5331024-5331043 None:intergenic 50.0%
AACTGGGCCTCTCCAAGACA+TGG + chr2.4:5331091-5331110 None:intergenic 55.0%
ACTGGGCCTCTCCAAGACAT+GGG + chr2.4:5331090-5331109 None:intergenic 55.0%
AGAGGCCCAGTTCCATTGAG+CGG - chr2.4:5331099-5331118 MS.gene032154:CDS 55.0%
ATCCAAGGAGGTCGGCAACA+TGG + chr2.4:5332744-5332763 None:intergenic 55.0%
CAGAAGCAACGGAGATGTCG+CGG - chr2.4:5330398-5330417 MS.gene032154:CDS 55.0%
CTGCGGCATGAGCGAGTAAT+TGG + chr2.4:5332187-5332206 None:intergenic 55.0%
CTTGTACACATGGGCAGCTG+CGG + chr2.4:5332204-5332223 None:intergenic 55.0%
GACAGCATCCTCAGCATACC+AGG - chr2.4:5328418-5328437 MS.gene032154:CDS 55.0%
GCTGCAAAAGAAGGTGGGAG+AGG - chr2.4:5328710-5328729 MS.gene032154:intron 55.0%
GGCCGTTCCTACTAATTCGG+AGG - chr2.4:5330835-5330854 MS.gene032154:intron 55.0%
TCCAAGGAGGTCGGCAACAT+GGG + chr2.4:5332743-5332762 None:intergenic 55.0%
! AACCTCAGCAGATGGTAGCG+TGG + chr2.4:5328333-5328352 None:intergenic 55.0%
! GTGATGGAAGCTGAGCGCAA+TGG - chr2.4:5333376-5333395 MS.gene032154:intron 55.0%
!! AGTTTTCAGGGCCGGACCTT+GGG + chr2.4:5331134-5331153 None:intergenic 55.0%
!! TAGTTTTCAGGGCCGGACCT+TGG + chr2.4:5331135-5331154 None:intergenic 55.0%
!! TGAGGTGCCGGATTCAAACC+CGG + chr2.4:5330623-5330642 None:intergenic 55.0%
CACCACGCTACCATCTGCTG+AGG - chr2.4:5328328-5328347 MS.gene032154:CDS 60.0%
GGGGTGTGCAAACCGCTCAA+TGG + chr2.4:5331114-5331133 None:intergenic 60.0%
GGTCGGCAACATGGGAAACC+AGG + chr2.4:5332735-5332754 None:intergenic 60.0%
GGTTTGCACACCCCAAGGTC+CGG - chr2.4:5331120-5331139 MS.gene032154:intron 60.0%
TCCCATGTTGCCGACCTCCT+TGG - chr2.4:5332739-5332758 MS.gene032154:intron 60.0%
TGAGCGGTTTGCACACCCCA+AGG - chr2.4:5331115-5331134 MS.gene032154:intron 60.0%
!! GTTTTCAGGGCCGGACCTTG+GGG + chr2.4:5331133-5331152 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 5328269 5334189 5328269 ID=MS.gene032154
chr2.4 mRNA 5328269 5334189 5328269 ID=MS.gene032154.t1;Parent=MS.gene032154
chr2.4 exon 5334019 5334189 5334019 ID=MS.gene032154.t1.exon1;Parent=MS.gene032154.t1
chr2.4 CDS 5334019 5334189 5334019 ID=cds.MS.gene032154.t1;Parent=MS.gene032154.t1
chr2.4 exon 5333688 5333757 5333688 ID=MS.gene032154.t1.exon2;Parent=MS.gene032154.t1
chr2.4 CDS 5333688 5333757 5333688 ID=cds.MS.gene032154.t1;Parent=MS.gene032154.t1
chr2.4 exon 5332015 5332073 5332015 ID=MS.gene032154.t1.exon3;Parent=MS.gene032154.t1
chr2.4 CDS 5332015 5332073 5332015 ID=cds.MS.gene032154.t1;Parent=MS.gene032154.t1
chr2.4 exon 5331052 5331127 5331052 ID=MS.gene032154.t1.exon4;Parent=MS.gene032154.t1
chr2.4 CDS 5331052 5331127 5331052 ID=cds.MS.gene032154.t1;Parent=MS.gene032154.t1
chr2.4 exon 5330875 5330952 5330875 ID=MS.gene032154.t1.exon5;Parent=MS.gene032154.t1
chr2.4 CDS 5330875 5330952 5330875 ID=cds.MS.gene032154.t1;Parent=MS.gene032154.t1
chr2.4 exon 5330682 5330769 5330682 ID=MS.gene032154.t1.exon6;Parent=MS.gene032154.t1
chr2.4 CDS 5330682 5330769 5330682 ID=cds.MS.gene032154.t1;Parent=MS.gene032154.t1
chr2.4 exon 5330223 5330478 5330223 ID=MS.gene032154.t1.exon7;Parent=MS.gene032154.t1
chr2.4 CDS 5330223 5330478 5330223 ID=cds.MS.gene032154.t1;Parent=MS.gene032154.t1
chr2.4 exon 5330033 5330148 5330033 ID=MS.gene032154.t1.exon8;Parent=MS.gene032154.t1
chr2.4 CDS 5330033 5330148 5330033 ID=cds.MS.gene032154.t1;Parent=MS.gene032154.t1
chr2.4 exon 5329162 5329379 5329162 ID=MS.gene032154.t1.exon9;Parent=MS.gene032154.t1
chr2.4 CDS 5329162 5329379 5329162 ID=cds.MS.gene032154.t1;Parent=MS.gene032154.t1
chr2.4 exon 5329041 5329072 5329041 ID=MS.gene032154.t1.exon10;Parent=MS.gene032154.t1
chr2.4 CDS 5329041 5329072 5329041 ID=cds.MS.gene032154.t1;Parent=MS.gene032154.t1
chr2.4 exon 5328854 5328956 5328854 ID=MS.gene032154.t1.exon11;Parent=MS.gene032154.t1
chr2.4 CDS 5328854 5328956 5328854 ID=cds.MS.gene032154.t1;Parent=MS.gene032154.t1
chr2.4 exon 5328572 5328680 5328572 ID=MS.gene032154.t1.exon12;Parent=MS.gene032154.t1
chr2.4 CDS 5328572 5328680 5328572 ID=cds.MS.gene032154.t1;Parent=MS.gene032154.t1
chr2.4 exon 5328269 5328440 5328269 ID=MS.gene032154.t1.exon13;Parent=MS.gene032154.t1
chr2.4 CDS 5328269 5328440 5328269 ID=cds.MS.gene032154.t1;Parent=MS.gene032154.t1
Gene Sequence

>MS.gene032154

ATGGCTCTGAATATGAAATCATTCAGAGTCTTTTTAATTCTCACTCTCTTCAATCTCTTCACCACGCTACCATCTGCTGAGGTTGTTTCACCAATTCTTGATGTTTCTTCACTTAATCGAACTAGTTTTCCCACAAACTTCATTTTTGGGACAGCATCCTCAGCATACCAGGTAAAATATTATTATTTTTAATATTACGTTATAGAAAATCTGGCCGACCGGTACTTCATTATTTCAATGAGACCTTCTTACATATTTGAATTCAATTTCAGTCGGACCAAAATGTAGTTTTTAATTTATGAGCATTGATTTAAAAATAATAATAATAATGGTTTAAAGTTTTATAAAATATTGAAAGTCCCACCAAGTTTAAGTTAAACCAAGGTAATTGAATTGAACAATTTGGTTGATGTCATGATATATATCATGTAGTACGAAGGTGCTGCAAAAGAAGGTGGGAGAGGAGCAAGTATATGGGACACCTACACTCATAAGTATCCAGGTATCTGATTTCTCCATCTATTTTTCGGATTGAATTCAAGATGCATGTAAAATGTAAAATTAATTTTGATTTAGTAACAACTCAATGTTTTTTTTATTCTATATCAAGATTGATTTTACGACTTTGATTTAATTAAAAGGGATGAAGAGTACTTTTATGATGAGTTTTACACTTTTTCTCTAAAATAAATATGTCCTACGACCATAAATAATATTAAATATTTTAATGGTCGCTTTTTTATGCAAAAAGATAATTTAAACAAGGTTAGTCAAACAAGACACTTGATTTCTTCTAGTCAAGAAAGGACTATTTTTCTTTTGGGTGAAATTCTTATATTTATTTATATGCAAAAGAACAAAACTCTTCTATATTTCCAAAAAAAAAAAAAATACTCTTCTATTTTCTTTATTATTATTATTATTATTGTTTTGCTATTGGTTTATATACTAATTACAATAGAATTTATTTTAAAAGAATTAATCAACAAAATTTAAATAAAAAAAACATATCTATGATAAAAACAGCTTAAATAGAACAAATAATTTACTATTGTGTTTGATGTTTTGTTATTATTTACAAGGGTTAATTATGTTTCTAGTCCCTATAAAATAGCGACCTTGTAAGTTTAGTCCCTACTTAATTTTAATAGCATTTTTAGTCCCTATAAAAAAAATTTACTTATAATTTTAGTCCCTGCTAAAACAAAGTTTGATTAATTATCCTTAAACTCTTAAATTTTTGAACGATTTTTTTGAGACAAGATTAGAACACTATGAAAGGTTCGTTTACTAAAATTTAGAATTTTCTGACATGAAATGAATTAAATATGAATTTTTTAAAACGACAAAAGTTAAAGATAAAAAGTAATAAAATCTGGATGTAGAAATCAAATTTTGCGATAATTTTTTGCGGACGAACTTTTAGTAATGTTCTAAACATGTCTGCAAAAAATTGTTCAAAAATTTAAGAGTTTAAGCATAAATTAAACAAATTTGAATTGAGTAGGGACTAATACTCAGTGCAGAAAAACAAAATTAGGGACTAAAAATGCTATTAAAATTAAGTATGGACTAAACTTACAAGGTCGCTATTTTATAGGGACTAGAAACATAATTAACCCTATTTACAAACACGTTCACCACAAACCAATATTGATGTGTATAGCACTGGTAATAAAAAAAATACGCTATGTTATTCTGCTCAATGGTGCAATTAATATGAGTTTGCCTCTCTCTGAGAGAACATTTTAATTTGACGGTATTATGTTGTGAAAGTTGCAAATCAAATTTTATGGAATGAGAGGCCGAAAGTCATAACTTAATTATATTTGAGAAGTATTTTATAAAAGAAATAGATTTGAGAAGCACTATTATAAGGGACAATCTAATATGAACCTTCTTGAAATGTGAACTGTGAATTTAATAAATTTTGCAAAAATTCCTTCAAAATAAAAGTTAGTAACATATTACGATTATTCTAAATTTTTATTAACATAAAATTAGTTTTTACTATATACACCTCTATTATTATAATTTATCTGTTCCATATTAGATGCACCTATGTTATAATTCTATTTTTAGCCTTTTACCAATAAAACAAATGTTCAACATGCAGAAAAGATATTAGACAGAAGCAACGGAGATGTCGCGGTTGATCAATATTACCGCTACAAGGTAATGTATTTATGATCAAAATCATGAACAAGGACCCCTATAATATTAAGAATGATGAATAATGTTGAAAATTGTGAATAGTTTAAGAGATTATCAATTTAAAGTTCATGATTGTTTGTGAGGTCTAGCTCAAATGCCAACGCCAATGCCTATATTGCTAGACTGAAGACATTCATCCGGGTTTGAATCCGGCACCTCATAGTTGTATGTGTGGGTATTAGATGGTATATCATCACTTCGGCTACGAACTATAAAAAATAATAGTCAATATTGTTAAAAAATCCAGTGGATGATACGAAATCGACTAAAATACCAAATATAATATATTTTTTACTTACTTAATGAGAATTAATTAATCCATAAAACCTTTCATAAGATAGAAAACTAGCAGGGCCGTTCCTACTAATTCGGAGGCTCAGTTCTGTAGGTGATAAAGAGACCCGTAAAAAAATAAAAATGTATTTTTTTTAAAGACTAATGTTCTATTTAAATTTTTTAAAAGATAAATACAAGGTATCGTATATAAGCGGTACATCCAAAGGTGAAAATCACTACCGTATACATTAGGAACCTCAAACCACCCTCCCAAAAACACACTCACCTAACACATAGCAGTACTATTGGGCTATAATTTTTTTTTAGGCCCATGTCTTGGAGAGGCCCAGTTCCATTGAGCGGTTTGCACACCCCAAGGTCCGGCCCTGAAAACTAGTAAAGTAATTATTATAAAGATAATGAGATTCAATGGAGAAAAATCAAATTCAATATCCCCTGCAATTGGTTACTATTTTGTATTATATTATCTATTTTGTTTTGTAGAATAAAATGAAAGTATGTTGTTTCAAAAAAAATATGGAACTAGTACGTTATACACTTAAATATCGCAGGAAGATGTTGGCATCATGAGGAATATGAATTTGGATGCTTACAGATTCTCGATATCTTGGTCTAGAATCCTCCCAAGTGAGTTAAACTTAAACGACTAACTCCTATTTAATTCTACATAATTATGCTGATGTTTCACACTTTTTTTTTCTTTCAATTTTAATAAACTATCAATAGAAGGAAAACTTAATGGAGGTATAAACCACGAAGGAGTCAAATATTACAACAACCTCATCAATGAGTTGTTGGCTAATGGTTAGTCCATACTTAGTTTACTTGAATTTTTATTAAACTACTACACATGTTAACATTTCAAACAACATTAAATGTAAACAAAGGTATTTGAATATTTATTTATAGGTCTACAACCATTTGTAACTCTATTTCATTGGGATCTTCCTCAAGCTTTAGAGGACGAGTATGGCGGCTTCTTAAGCCCTCTCATTGTGTAAGTGATACAAAAGTACCTAGATCATATTTACATAAATATTAGTAAGGTGTTAATTCATTTTTTCATGCTATTTATCTATAATAGCTTTGTATATGAAGATCCTCATTAGGGTAGTTATGTATTTGGAACAAATTGTATGTTAACCAATCAAAAAGCAACAATACTAAGCATTAATATCATAATCCATGGCTTATTTTTAGAAATGATTTTCAAGACTATGCGGAACTTTGTTTCAAAGAGTTTGGAGATAGGGTGAAGTATTGGATCACTTTCAATGAGCCATCCACTTTCAGCGTTTCTTCCTATGCATTAGGGATCTTTCCACCTGGTCGATGTTCTAAATGGTTGAGCTCAAATTGCACTGGTGGTGATTCAGGGAAAGAGCCTTACATTGTTTCCCATCACCAATTACTCGCTCATGCCGCAGCTGCCCATGTGTACAAGAAGAAGTATCAGGTTTGTTATAACTTAGATAAGAACTTAATTTAAAGTTCAAGATACCTAATAACCAAAAAATGATCTATATATAGGAATCTCAAAAGGGTGTGATAGGCATAACCTTGGTGACTAGTTGGTTCATTCCACTTTCTGATAACAAAGTCGATCAAAAAGCTGCTGAACGAGGACTAGACTTCATGTTTGGATGGTAAGTGCTTAACTCTACACTGGAATACTAGTTAGATATAGTTGGATATTAATTAGAATTAGTTTATTTTTTTTAAAGAAGTTAGAACTTAGTGGTGATTAGTTGTTTTTTTATAAGCAAATATGTATTGATCATGAGTAAACTAGCACACGATGTGCAAATCCGCTCCAAAATAGTTTATAACTATATGCATACTTAAATTGTTGTTTTCGAAATTAGAAAGAGTACCTTAATCAAGGATTTGTTCTATTTATGAGCACCACTCTTACTCCTATCAAAATGTGATCTCTTCATCAAGGAGTCACTCCTGGTTTCCCATGTTGCCGACCTCCTTGGATTTGCACCTAACGGTAGACCCCAAAACTGAAATGGTACTTTATCATATATATAGGTGCAAAACAAGAAGTTTGAAGCAGCTTCCATGAAATGTTTGTTGTTAGTTAGTTATATTAGTTACTCCAAGATCATAATAAAAAGCGATCATTTGTACATTCATTTGAAATCATCATAATACCAATTCCAAAACCAATCCATCTTTCTAGCATTGTATTTATCTCTATAATTAGTTGGGCTATATTGTATAGTACTTCTCAACAATAGTGATTGTTCGTGAGATTGTTTTTATTTTTTTCTATTTGTAACAATGATTACAGGTATATGGAACCACTAACAAGAGGGAAATATCCACAAAGCATGCGTTCTCTTGTTGGAAAACGATTGCCAGAGTTCTCTAAAAAGCAAGCAAGACTACTTAAAGGGTCATTTGATTTCCTTGGACTAAACTATTATACATCTGTCTATGCTGCCGATGCACCACAACTAAGAAATGGTAGACTCAATTACCTCACTGATTTTAATGCCAATATTACAAGTAAGCATTTCCTTATTTATTGATCATTCTGTAAATTAATGAATATTTTTAAATTTGATGATAATTTTTTTTTTTTTTTGTGATGGAAGCTGAGCGCAATGGTATTCCAATAGGTCCAAGGGTACGTATACCACAACATATTATAACTTTGTAATTTTTTAAGTGTATATATATTTAGGTTATGTTTGAAATTATATTTGTGCAGGCAGCTTCAAGTTGGTTATATGTTTATCCTAAAGGAATTCAAGAATTGTTACTCTATGTCAAGAAAGTGTACAACAATCCTTTGATTTACATCACCGAAAATGGTAAACACGCTTTAATTCATATTGTTTATTCTGAATATTGTTATATAAAGTAAATGTGAGATAGAATACATAACATTTTTTTATAAAAGTTGACGTTTATGTCTGAATTTTCTTTTGATATTTTTATCTAACATATATATGATCAGAATCTTTTTTGAAAACTTAATTTTTAGGTATTGATGAGTTCAATGATCCAACACTATCACTAGAGGAAGCCCTTATGGACACTTATAGAATTGATTATTTCCATCGTCATCTCTATTATATTCGATCTGCAATCAAGTAAGTGAACATTATTTATATATTTAATATTTTAGATTAGTTTTTATAAGGGTTTCTTAGAGTGGCTATATATATTATATATTTAAAGTATAGTTGTTTTATCATACATGATTTATTTTATTTTTTATTAGGAAGGGCGTAAATATAAAAGGATATTTTGCATGGTCGTTTCTTGACAATTTCGAATGGGCATCCGGTTATGCAATGCGATTTGGCATGAATTTTGTGGATTACAAAAATGGTTTGAAAAGACACCAAAAGTTGTCTGCAAAGTGGTTTACTAATTTTCTCAAAAGATATTAA
Protein sequence

>MS.gene032154.t1

MALNMKSFRVFLILTLFNLFTTLPSAEVVSPILDVSSLNRTSFPTNFIFGTASSAYQYEGAAKEGGRGASIWDTYTHKYPEKILDRSNGDVAVDQYYRYKEDVGIMRNMNLDAYRFSISWSRILPKGKLNGGINHEGVKYYNNLINELLANGLQPFVTLFHWDLPQALEDEYGGFLSPLIVNDFQDYAELCFKEFGDRVKYWITFNEPSTFSVSSYALGIFPPGRCSKWLSSNCTGGDSGKEPYIVSHHQLLAHAAAAHVYKKKYQESQKGVIGITLVTSWFIPLSDNKVDQKAAERGLDFMFGWYMEPLTRGKYPQSMRSLVGKRLPEFSKKQARLLKGSFDFLGLNYYTSVYAADAPQLRNGRLNYLTDFNANITTERNGIPIGPRAASSWLYVYPKGIQELLLYVKKVYNNPLIYITENGIDEFNDPTLSLEEALMDTYRIDYFHRHLYYIRSAIKKGVNIKGYFAWSFLDNFEWASGYAMRFGMNFVDYKNGLKRHQKLSAKWFTNFLKRY