Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033273.t1 | XP_013457775.1 | 96.8 | 349 | 11 | 0 | 1 | 349 | 1 | 349 | 7.90E-182 | 646.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033273.t1 | A2RVM0 | 43.3 | 326 | 177 | 2 | 21 | 346 | 5 | 322 | 2.0e-64 | 247.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033273.t1 | A0A072UR37 | 96.8 | 349 | 11 | 0 | 1 | 349 | 1 | 349 | 5.7e-182 | 646.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene49120 | MS.gene033273 | PPI |
| MS.gene006265 | MS.gene033273 | PPI |
| MS.gene34138 | MS.gene033273 | PPI |
| MS.gene061157 | MS.gene033273 | PPI |
| MS.gene34140 | MS.gene033273 | PPI |
| MS.gene006263 | MS.gene033273 | PPI |
| MS.gene061155 | MS.gene033273 | PPI |
| MS.gene061158 | MS.gene033273 | PPI |
| MS.gene033273 | MS.gene49117 | PPI |
| MS.gene49118 | MS.gene033273 | PPI |
| MS.gene34141 | MS.gene033273 | PPI |
| MS.gene006264 | MS.gene033273 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033273.t1 | MTR_4g105310 | 96.848 | 349 | 11 | 0 | 1 | 349 | 1 | 349 | 0.0 | 693 |
| MS.gene033273.t1 | MTR_3g077410 | 83.891 | 329 | 53 | 0 | 12 | 340 | 1 | 329 | 0.0 | 578 |
| MS.gene033273.t1 | MTR_4g105310 | 97.358 | 265 | 7 | 0 | 1 | 265 | 1 | 265 | 0.0 | 529 |
| MS.gene033273.t1 | MTR_8g099995 | 52.727 | 330 | 152 | 2 | 12 | 339 | 1 | 328 | 2.36e-121 | 353 |
| MS.gene033273.t1 | MTR_7g099850 | 48.916 | 323 | 160 | 3 | 12 | 333 | 1 | 319 | 2.81e-102 | 304 |
| MS.gene033273.t1 | MTR_1g068970 | 48.137 | 322 | 163 | 2 | 12 | 333 | 1 | 318 | 8.53e-102 | 303 |
| MS.gene033273.t1 | MTR_8g098415 | 45.130 | 308 | 165 | 2 | 18 | 325 | 2 | 305 | 3.84e-90 | 273 |
| MS.gene033273.t1 | MTR_6g053550 | 47.742 | 310 | 157 | 2 | 25 | 332 | 17 | 323 | 3.90e-90 | 273 |
| MS.gene033273.t1 | MTR_8g098415 | 44.444 | 315 | 171 | 2 | 18 | 332 | 2 | 312 | 4.15e-90 | 273 |
| MS.gene033273.t1 | MTR_1g100395 | 46.795 | 312 | 162 | 2 | 24 | 335 | 8 | 315 | 8.30e-90 | 272 |
| MS.gene033273.t1 | MTR_1g100305 | 43.910 | 312 | 171 | 2 | 24 | 335 | 8 | 315 | 9.42e-85 | 259 |
| MS.gene033273.t1 | MTR_1g100335 | 44.231 | 312 | 170 | 2 | 24 | 335 | 8 | 315 | 2.99e-83 | 255 |
| MS.gene033273.t1 | MTR_1g100315 | 43.269 | 312 | 173 | 2 | 24 | 335 | 8 | 315 | 5.33e-82 | 252 |
| MS.gene033273.t1 | MTR_1g068970 | 44.841 | 252 | 138 | 1 | 82 | 333 | 1 | 251 | 3.33e-72 | 225 |
| MS.gene033273.t1 | MTR_6g053600 | 45.660 | 265 | 139 | 3 | 26 | 288 | 4 | 265 | 5.37e-69 | 218 |
| MS.gene033273.t1 | MTR_8g098415 | 42.972 | 249 | 141 | 1 | 77 | 325 | 1 | 248 | 2.83e-68 | 215 |
| MS.gene033273.t1 | MTR_1g100335 | 46.774 | 248 | 129 | 1 | 24 | 271 | 8 | 252 | 1.10e-65 | 209 |
| MS.gene033273.t1 | MTR_1g100335 | 45.968 | 248 | 130 | 2 | 24 | 271 | 8 | 251 | 1.99e-65 | 208 |
| MS.gene033273.t1 | MTR_8g098415 | 47.489 | 219 | 112 | 1 | 18 | 236 | 2 | 217 | 1.50e-61 | 196 |
| MS.gene033273.t1 | MTR_8g022500 | 51.200 | 125 | 36 | 1 | 39 | 163 | 417 | 516 | 4.77e-29 | 117 |
| MS.gene033273.t1 | MTR_3g009190 | 29.508 | 305 | 192 | 8 | 45 | 332 | 59 | 357 | 6.38e-28 | 112 |
| MS.gene033273.t1 | MTR_3g009190 | 29.508 | 305 | 192 | 8 | 45 | 332 | 77 | 375 | 8.16e-28 | 112 |
| MS.gene033273.t1 | MTR_6g453040 | 29.180 | 305 | 193 | 8 | 45 | 332 | 37 | 335 | 1.45e-27 | 111 |
| MS.gene033273.t1 | MTR_3g091070 | 30.263 | 304 | 171 | 9 | 46 | 332 | 38 | 317 | 2.36e-27 | 110 |
| MS.gene033273.t1 | MTR_6g041980 | 29.730 | 259 | 167 | 6 | 52 | 309 | 70 | 314 | 1.11e-25 | 105 |
| MS.gene033273.t1 | MTR_3g009190 | 29.252 | 294 | 185 | 8 | 56 | 332 | 69 | 356 | 1.48e-24 | 103 |
| MS.gene033273.t1 | MTR_6g081020 | 28.481 | 316 | 186 | 10 | 40 | 328 | 51 | 353 | 2.11e-23 | 100 |
| MS.gene033273.t1 | MTR_2g079710 | 28.076 | 317 | 186 | 12 | 50 | 332 | 88 | 396 | 9.91e-21 | 92.8 |
| MS.gene033273.t1 | MTR_6g041980 | 28.804 | 184 | 124 | 2 | 52 | 235 | 70 | 246 | 1.15e-18 | 85.1 |
| MS.gene033273.t1 | MTR_3g098470 | 28.571 | 294 | 152 | 11 | 51 | 308 | 37 | 308 | 1.22e-16 | 80.1 |
| MS.gene033273.t1 | MTR_6g453040 | 30.693 | 202 | 125 | 4 | 45 | 235 | 59 | 256 | 1.69e-16 | 79.3 |
| MS.gene033273.t1 | MTR_1g051165 | 31.651 | 218 | 113 | 7 | 52 | 256 | 20 | 214 | 6.51e-16 | 77.4 |
| MS.gene033273.t1 | MTR_4g058840 | 30.622 | 209 | 122 | 6 | 52 | 256 | 17 | 206 | 1.59e-15 | 76.3 |
| MS.gene033273.t1 | MTR_4g058820 | 30.622 | 209 | 122 | 6 | 52 | 256 | 17 | 206 | 1.59e-15 | 76.3 |
| MS.gene033273.t1 | MTR_4g087460 | 27.000 | 300 | 171 | 7 | 51 | 316 | 24 | 309 | 3.17e-14 | 72.8 |
| MS.gene033273.t1 | MTR_7g076660 | 27.907 | 301 | 138 | 12 | 51 | 303 | 10 | 279 | 3.69e-14 | 72.4 |
| MS.gene033273.t1 | MTR_7g076660 | 27.907 | 301 | 138 | 12 | 51 | 303 | 9 | 278 | 3.90e-14 | 72.4 |
| MS.gene033273.t1 | MTR_8g031610 | 26.433 | 314 | 154 | 11 | 47 | 308 | 3 | 291 | 4.53e-14 | 72.4 |
| MS.gene033273.t1 | MTR_6g453040 | 29.787 | 188 | 117 | 4 | 45 | 221 | 59 | 242 | 3.48e-13 | 68.9 |
| MS.gene033273.t1 | MTR_5g062280 | 24.920 | 313 | 163 | 11 | 47 | 310 | 5 | 294 | 4.92e-13 | 69.3 |
| MS.gene033273.t1 | MTR_8g031630 | 25.321 | 312 | 153 | 11 | 51 | 308 | 9 | 294 | 4.11e-12 | 66.6 |
| MS.gene033273.t1 | MTR_8g089575 | 34.965 | 143 | 84 | 3 | 51 | 189 | 50 | 187 | 1.62e-11 | 64.7 |
| MS.gene033273.t1 | MTR_8g031650 | 25.163 | 306 | 149 | 11 | 52 | 303 | 104 | 383 | 1.66e-11 | 65.5 |
| MS.gene033273.t1 | MTR_7g076655 | 26.370 | 292 | 154 | 11 | 51 | 303 | 9 | 278 | 1.81e-11 | 64.3 |
| MS.gene033273.t1 | MTR_8g031650 | 25.769 | 260 | 129 | 8 | 51 | 256 | 9 | 258 | 2.95e-11 | 65.1 |
| MS.gene033273.t1 | MTR_8g031650 | 25.163 | 306 | 149 | 11 | 52 | 303 | 270 | 549 | 2.98e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033273.t1 | AT5G50130 | 72.404 | 337 | 91 | 2 | 12 | 347 | 1 | 336 | 4.76e-175 | 489 |
| MS.gene033273.t1 | AT5G50130 | 71.284 | 296 | 85 | 0 | 52 | 347 | 7 | 302 | 6.83e-153 | 432 |
| MS.gene033273.t1 | AT5G50130 | 76.619 | 278 | 63 | 2 | 12 | 288 | 1 | 277 | 1.54e-151 | 429 |
| MS.gene033273.t1 | AT5G50130 | 71.044 | 297 | 85 | 1 | 52 | 347 | 7 | 303 | 1.80e-151 | 429 |
| MS.gene033273.t1 | AT5G50130 | 76.344 | 279 | 63 | 3 | 12 | 288 | 1 | 278 | 4.52e-150 | 426 |
| MS.gene033273.t1 | AT5G50130 | 76.265 | 257 | 60 | 1 | 12 | 268 | 1 | 256 | 1.66e-140 | 399 |
| MS.gene033273.t1 | AT5G50130 | 75.969 | 258 | 60 | 2 | 12 | 268 | 1 | 257 | 5.29e-139 | 395 |
| MS.gene033273.t1 | AT5G50130 | 75.630 | 238 | 57 | 1 | 52 | 288 | 7 | 244 | 4.18e-128 | 369 |
| MS.gene033273.t1 | AT5G50130 | 75.314 | 239 | 57 | 2 | 52 | 288 | 7 | 245 | 1.61e-126 | 365 |
| MS.gene033273.t1 | AT4G24050 | 54.747 | 316 | 138 | 2 | 12 | 325 | 1 | 313 | 7.33e-122 | 354 |
| MS.gene033273.t1 | AT1G64590 | 53.293 | 334 | 141 | 3 | 12 | 333 | 1 | 331 | 5.28e-106 | 314 |
| MS.gene033273.t1 | AT4G24050 | 53.763 | 279 | 122 | 3 | 12 | 288 | 1 | 274 | 2.20e-101 | 300 |
| MS.gene033273.t1 | AT5G02540 | 48.936 | 329 | 164 | 2 | 14 | 342 | 2 | 326 | 1.20e-94 | 285 |
| MS.gene033273.t1 | AT2G37540 | 47.604 | 313 | 160 | 2 | 14 | 326 | 2 | 310 | 3.38e-94 | 284 |
| MS.gene033273.t1 | AT4G23420 | 43.631 | 314 | 174 | 1 | 18 | 331 | 2 | 312 | 2.79e-87 | 266 |
| MS.gene033273.t1 | AT4G23420 | 43.631 | 314 | 174 | 1 | 18 | 331 | 2 | 312 | 2.79e-87 | 266 |
| MS.gene033273.t1 | AT4G23430 | 42.857 | 329 | 180 | 2 | 18 | 346 | 2 | 322 | 1.07e-86 | 265 |
| MS.gene033273.t1 | AT4G23420 | 44.118 | 306 | 168 | 1 | 26 | 331 | 27 | 329 | 4.79e-86 | 263 |
| MS.gene033273.t1 | AT4G11410 | 45.695 | 302 | 160 | 2 | 24 | 325 | 8 | 305 | 8.19e-85 | 259 |
| MS.gene033273.t1 | AT4G23430 | 43.161 | 329 | 177 | 4 | 18 | 346 | 2 | 320 | 1.37e-84 | 259 |
| MS.gene033273.t1 | AT4G23430 | 40.122 | 329 | 179 | 3 | 18 | 346 | 2 | 312 | 5.22e-76 | 237 |
| MS.gene033273.t1 | AT2G37540 | 48.980 | 245 | 122 | 1 | 14 | 258 | 2 | 243 | 1.19e-74 | 232 |
| MS.gene033273.t1 | AT4G23430 | 40.426 | 329 | 176 | 5 | 18 | 346 | 2 | 310 | 6.78e-74 | 231 |
| MS.gene033273.t1 | AT4G11410 | 46.341 | 246 | 129 | 1 | 24 | 269 | 8 | 250 | 3.12e-69 | 218 |
| MS.gene033273.t1 | AT4G23420 | 43.182 | 264 | 147 | 1 | 18 | 281 | 2 | 262 | 5.87e-69 | 217 |
| MS.gene033273.t1 | AT4G23420 | 46.444 | 239 | 125 | 1 | 18 | 256 | 2 | 237 | 1.22e-67 | 214 |
| MS.gene033273.t1 | AT4G09750 | 29.021 | 286 | 183 | 6 | 31 | 309 | 19 | 291 | 2.75e-28 | 112 |
| MS.gene033273.t1 | AT4G27760 | 31.847 | 314 | 180 | 10 | 42 | 332 | 49 | 351 | 8.17e-26 | 107 |
| MS.gene033273.t1 | AT5G53090 | 31.310 | 313 | 181 | 10 | 43 | 332 | 49 | 350 | 1.46e-24 | 103 |
| MS.gene033273.t1 | AT5G15940 | 29.667 | 300 | 186 | 8 | 52 | 333 | 63 | 355 | 4.51e-24 | 102 |
| MS.gene033273.t1 | AT5G15940 | 29.667 | 300 | 186 | 8 | 52 | 333 | 64 | 356 | 4.57e-24 | 102 |
| MS.gene033273.t1 | AT5G15940 | 29.667 | 300 | 186 | 8 | 52 | 333 | 64 | 356 | 4.57e-24 | 102 |
| MS.gene033273.t1 | AT5G04070 | 29.967 | 307 | 183 | 11 | 52 | 338 | 62 | 356 | 8.12e-24 | 101 |
| MS.gene033273.t1 | AT1G03630 | 29.430 | 316 | 182 | 12 | 50 | 332 | 89 | 396 | 2.95e-23 | 100 |
| MS.gene033273.t1 | AT1G03630 | 29.430 | 316 | 182 | 12 | 50 | 332 | 91 | 398 | 3.44e-23 | 99.8 |
| MS.gene033273.t1 | AT5G54190 | 26.433 | 314 | 191 | 12 | 52 | 332 | 96 | 402 | 7.49e-23 | 99.0 |
| MS.gene033273.t1 | AT5G53100 | 29.773 | 309 | 184 | 9 | 47 | 332 | 43 | 341 | 2.24e-22 | 97.1 |
| MS.gene033273.t1 | AT5G15940 | 30.916 | 262 | 156 | 8 | 52 | 295 | 64 | 318 | 3.78e-22 | 95.9 |
| MS.gene033273.t1 | AT4G27440 | 28.662 | 314 | 184 | 12 | 52 | 332 | 92 | 398 | 4.43e-22 | 96.7 |
| MS.gene033273.t1 | AT4G27440 | 28.662 | 314 | 184 | 12 | 52 | 332 | 92 | 398 | 4.43e-22 | 96.7 |
| MS.gene033273.t1 | AT3G46170 | 26.829 | 287 | 173 | 10 | 28 | 303 | 11 | 271 | 4.96e-16 | 77.8 |
| MS.gene033273.t1 | AT1G63380 | 28.571 | 238 | 139 | 8 | 29 | 259 | 8 | 221 | 3.78e-15 | 75.5 |
| MS.gene033273.t1 | AT3G55290 | 32.394 | 213 | 119 | 8 | 52 | 259 | 23 | 215 | 6.86e-15 | 74.3 |
| MS.gene033273.t1 | AT3G55290 | 32.394 | 213 | 119 | 8 | 52 | 259 | 24 | 216 | 7.86e-15 | 74.3 |
| MS.gene033273.t1 | AT5G61830 | 25.256 | 293 | 166 | 8 | 51 | 308 | 39 | 313 | 8.43e-15 | 74.7 |
| MS.gene033273.t1 | AT5G61830 | 25.256 | 293 | 166 | 8 | 51 | 308 | 39 | 313 | 8.43e-15 | 74.7 |
| MS.gene033273.t1 | AT1G63380 | 28.879 | 232 | 134 | 8 | 35 | 259 | 9 | 216 | 1.52e-14 | 73.6 |
| MS.gene033273.t1 | AT1G63380 | 28.879 | 232 | 134 | 8 | 35 | 259 | 11 | 218 | 1.67e-14 | 73.6 |
| MS.gene033273.t1 | AT1G63380 | 28.879 | 232 | 134 | 8 | 35 | 259 | 7 | 214 | 1.77e-14 | 73.2 |
| MS.gene033273.t1 | AT3G55310 | 31.466 | 232 | 127 | 9 | 35 | 259 | 9 | 215 | 2.37e-14 | 72.8 |
| MS.gene033273.t1 | AT1G62610 | 29.694 | 229 | 130 | 9 | 35 | 256 | 6 | 210 | 6.86e-14 | 71.6 |
| MS.gene033273.t1 | AT1G62610 | 29.310 | 232 | 133 | 9 | 35 | 259 | 11 | 218 | 7.25e-14 | 71.6 |
| MS.gene033273.t1 | AT1G62610 | 29.694 | 229 | 130 | 9 | 35 | 256 | 7 | 211 | 7.42e-14 | 71.6 |
| MS.gene033273.t1 | AT1G62610 | 29.694 | 229 | 130 | 9 | 35 | 256 | 5 | 209 | 8.13e-14 | 71.2 |
| MS.gene033273.t1 | AT3G03980 | 29.114 | 237 | 125 | 9 | 37 | 254 | 1 | 213 | 1.20e-12 | 67.8 |
Find 52 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCAGGGCCTAGTGGTTT+TGG | 0.230469 | 8.4:-20979907 | MS.gene033273:CDS |
| ACACTTACATGAGAATATTA+AGG | 0.272671 | 8.4:+20979384 | None:intergenic |
| GAAGGGAACAATAAGGTATT+TGG | 0.288975 | 8.4:-20979935 | MS.gene033273:CDS |
| TGGTTGGCAACAAAAGAAAA+AGG | 0.290146 | 8.4:-20979969 | MS.gene033273:CDS |
| TCAATTGAAGGTGCTACTTC+TGG | 0.308401 | 8.4:-20979611 | MS.gene033273:intron |
| AGGTATTTGGCAGGCATTGC+AGG | 0.316972 | 8.4:-20979922 | MS.gene033273:CDS |
| TTATGCTGAGGTTATTCTAT+TGG | 0.355615 | 8.4:-20979474 | MS.gene033273:CDS |
| ATGAGAGCTGTTAGGTTTGA+AGG | 0.360069 | 8.4:+20979835 | None:intergenic |
| GAAGGTGCTACTTCTGGTAT+TGG | 0.364873 | 8.4:-20979605 | MS.gene033273:intron |
| AGGAATTATTAGAGCACATA+AGG | 0.377554 | 8.4:-20977212 | MS.gene033273:CDS |
| TGGTGCCAGGGACATGAAAA+AGG | 0.383783 | 8.4:-20979534 | MS.gene033273:CDS |
| TTTCTTCAGTAATTCATAGC+TGG | 0.397861 | 8.4:-20977660 | MS.gene033273:CDS |
| CGACTAAAACAAGCAACAAT+TGG | 0.400873 | 8.4:-20976776 | MS.gene033273:CDS |
| GCAAATAAAACAGGCATTCA+AGG | 0.411603 | 8.4:-20977697 | MS.gene033273:CDS |
| TGAGAGTTGTGGTTGGTGCC+AGG | 0.429651 | 8.4:-20979547 | MS.gene033273:CDS |
| TTCTTCAGTAATTCATAGCT+GGG | 0.432368 | 8.4:-20977659 | MS.gene033273:CDS |
| CAGCATAAGGACTCTCCTCT+TGG | 0.434439 | 8.4:+20979489 | None:intergenic |
| ATTCCTGTCTTCACAATGCC+TGG | 0.434455 | 8.4:+20977229 | None:intergenic |
| CATCGATGAAGGGAACAATA+AGG | 0.437595 | 8.4:-20979942 | MS.gene033273:CDS |
| TTCCTTCACATGCAGAATCA+TGG | 0.450116 | 8.4:+20977444 | None:intergenic |
| AGCACATAAGGGCTTAATAA+CGG | 0.451942 | 8.4:-20977200 | MS.gene033273:CDS |
| ATAGATACTGCAAATAAAAC+AGG | 0.452810 | 8.4:-20977706 | MS.gene033273:CDS |
| ACATTTGCTACAAATTACTT+AGG | 0.455021 | 8.4:-20979007 | MS.gene033273:intron |
| GCACATAAGGGCTTAATAAC+GGG | 0.456442 | 8.4:-20977199 | MS.gene033273:intron |
| CACTTACATGAGAATATTAA+GGG | 0.464360 | 8.4:+20979385 | None:intergenic |
| AATAGAATAACCTCAGCATA+AGG | 0.472498 | 8.4:+20979476 | None:intergenic |
| TACCAGTGATGAGAGCTGTT+AGG | 0.489625 | 8.4:+20979827 | None:intergenic |
| TGCTTTAAAGACATGCTCAC+TGG | 0.492898 | 8.4:-20977619 | MS.gene033273:CDS |
| GGAAATGGCTAGACAACTAA+AGG | 0.519535 | 8.4:-20977425 | MS.gene033273:intron |
| TGAGAGCTGTTAGGTTTGAA+GGG | 0.521862 | 8.4:+20979836 | None:intergenic |
| AGATACATGGTCTAGAATAG+AGG | 0.530017 | 8.4:+20976741 | None:intergenic |
| GATTCTGCATGTGAAGGAAA+TGG | 0.534551 | 8.4:-20977440 | MS.gene033273:CDS |
| GGAATTATTAGAGCACATAA+GGG | 0.541916 | 8.4:-20977211 | MS.gene033273:CDS |
| AACCTAACAGCTCTCATCAC+TGG | 0.543509 | 8.4:-20979829 | MS.gene033273:intron |
| ACTATCAATGCAGTGCATCC+AGG | 0.545366 | 8.4:-20977247 | MS.gene033273:CDS |
| CATCCAGGCATTGTGAAGAC+AGG | 0.549477 | 8.4:-20977232 | MS.gene033273:CDS |
| GAGAGTTGTGGTTGGTGCCA+GGG | 0.563988 | 8.4:-20979546 | MS.gene033273:CDS |
| GAATTTGAGCCAAAACCACT+AGG | 0.566141 | 8.4:+20979898 | None:intergenic |
| GCAGGCATTGCAGGGCCTAG+TGG | 0.577354 | 8.4:-20979913 | MS.gene033273:CDS |
| GATACATGGTCTAGAATAGA+GGG | 0.578220 | 8.4:+20976742 | None:intergenic |
| GGTATTTGGCAGGCATTGCA+GGG | 0.578276 | 8.4:-20979921 | MS.gene033273:CDS |
| GAGCTGTTAGGTTTGAAGGG+AGG | 0.584163 | 8.4:+20979839 | None:intergenic |
| AGCCATGATTCTGCATGTGA+AGG | 0.585391 | 8.4:-20977446 | MS.gene033273:CDS |
| GGAACAATAAGGTATTTGGC+AGG | 0.598423 | 8.4:-20979931 | MS.gene033273:CDS |
| AAAAGGGAATCATCGATGAA+GGG | 0.604378 | 8.4:-20979952 | MS.gene033273:CDS |
| AGTTGGAGGACACGAATGGT+TGG | 0.604406 | 8.4:-20979985 | None:intergenic |
| GCTGCTCAAAACGATATCAC+AGG | 0.618153 | 8.4:-20977049 | MS.gene033273:intron |
| AGGAGTGTACTCTCATAACC+TGG | 0.628213 | 8.4:-20979056 | MS.gene033273:CDS |
| ATGCACGGTGTCTAGATACA+TGG | 0.629660 | 8.4:+20976728 | None:intergenic |
| AGAGGAGTGAGAGTTGTGGT+TGG | 0.631623 | 8.4:-20979554 | MS.gene033273:CDS |
| AGAGGAGAGTCCTTATGCTG+AGG | 0.678257 | 8.4:-20979486 | MS.gene033273:CDS |
| ACTTACATGAGAATATTAAG+GGG | 0.701725 | 8.4:+20979386 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAAAAACTAAAGTAA+TGG | - | chr8.4:20978006-20978025 | MS.gene033273:intron | 10.0% |
| !! | ATTAATCATGTTAAAAAATA+TGG | - | chr8.4:20978600-20978619 | MS.gene033273:intron | 10.0% |
| !!! | ACTAATATTTTTTTGAATAT+TGG | - | chr8.4:20979408-20979427 | MS.gene033273:CDS | 10.0% |
| !!! | CTAATATTTTTTTGAATATT+GGG | - | chr8.4:20979409-20979428 | MS.gene033273:CDS | 10.0% |
| !!! | TGAAATTTTTTGAAAATATA+TGG | + | chr8.4:20979610-20979629 | None:intergenic | 10.0% |
| !!! | TGCATTAATTAATTAAATTT+TGG | - | chr8.4:20979171-20979190 | MS.gene033273:intron | 10.0% |
| !! | ATTTAAACTCCATAATAAAA+AGG | - | chr8.4:20978439-20978458 | MS.gene033273:intron | 15.0% |
| !! | TTAATGTATTATTCATACAT+AGG | + | chr8.4:20977928-20977947 | None:intergenic | 15.0% |
| !!! | AATGAATATATGTTTTGTTT+TGG | - | chr8.4:20977070-20977089 | MS.gene033273:CDS | 15.0% |
| !!! | ATTTTTTAACATGATTAATC+AGG | + | chr8.4:20978599-20978618 | None:intergenic | 15.0% |
| !!! | CAAAAAGTTTTTTTTTGTTA+TGG | + | chr8.4:20978217-20978236 | None:intergenic | 15.0% |
| !!! | TTGTTTCAAACAATTTTATA+TGG | - | chr8.4:20979569-20979588 | MS.gene033273:CDS | 15.0% |
| !!! | TTTTTGTAATAAGAAACTTA+AGG | - | chr8.4:20978231-20978250 | MS.gene033273:intron | 15.0% |
| !! | AACAAAAATGTAGTTACAAT+GGG | - | chr8.4:20979214-20979233 | MS.gene033273:intron | 20.0% |
| !! | AATGAAGCATAGTAAAAATT+AGG | - | chr8.4:20977881-20977900 | MS.gene033273:intron | 20.0% |
| !! | ATACAATATAATCACAATTG+AGG | + | chr8.4:20977493-20977512 | None:intergenic | 20.0% |
| !! | ATTGTGATTATATTGTATTG+TGG | - | chr8.4:20977495-20977514 | MS.gene033273:intron | 20.0% |
| !! | GAATATTGGGAAATAATTAT+AGG | - | chr8.4:20979422-20979441 | MS.gene033273:CDS | 20.0% |
| !! | GTCATATCATATATGATTAA+GGG | - | chr8.4:20979355-20979374 | MS.gene033273:intron | 20.0% |
| !! | TAACAAAAATGTAGTTACAA+TGG | - | chr8.4:20979213-20979232 | MS.gene033273:intron | 20.0% |
| !! | TGTCATATCATATATGATTA+AGG | - | chr8.4:20979354-20979373 | MS.gene033273:intron | 20.0% |
| !! | TTGAAAATATATGGCTTAAT+TGG | + | chr8.4:20979601-20979620 | None:intergenic | 20.0% |
| !! | TTTAAATGGACCAAAAAAAT+TGG | - | chr8.4:20978491-20978510 | MS.gene033273:intron | 20.0% |
| !! | TTTATGAGACTATATATCTT+TGG | + | chr8.4:20976922-20976941 | None:intergenic | 20.0% |
| !!! | AACATTTTTGAAAGCTAATT+TGG | - | chr8.4:20978786-20978805 | MS.gene033273:intron | 20.0% |
| !!! | AATTTGTTTGAATTAGAAGA+AGG | - | chr8.4:20978848-20978867 | MS.gene033273:intron | 20.0% |
| !!! | TGTGACTTTTTTTTTTTATG+TGG | + | chr8.4:20978347-20978366 | None:intergenic | 20.0% |
| !!! | TTTTTGGTCCATTTAAATTT+TGG | + | chr8.4:20978488-20978507 | None:intergenic | 20.0% |
| ! | AAACTTTAGCAGTCTAATTA+TGG | - | chr8.4:20978382-20978401 | MS.gene033273:intron | 25.0% |
| ! | AAATATTAAGGCAATTTGAG+AGG | + | chr8.4:20979327-20979346 | None:intergenic | 25.0% |
| ! | AAGCATAAGAAATGACAATA+AGG | + | chr8.4:20977370-20977389 | None:intergenic | 25.0% |
| ! | ACACTTACATGAGAATATTA+AGG | + | chr8.4:20977328-20977347 | None:intergenic | 25.0% |
| ! | ACTTACATGAGAATATTAAG+GGG | + | chr8.4:20977326-20977345 | None:intergenic | 25.0% |
| ! | ATAGATACTGCAAATAAAAC+AGG | - | chr8.4:20979003-20979022 | MS.gene033273:intron | 25.0% |
| ! | CACTTACATGAGAATATTAA+GGG | + | chr8.4:20977327-20977346 | None:intergenic | 25.0% |
| ! | CCATAATAAAAAGGTCTAAA+CGG | - | chr8.4:20978448-20978467 | MS.gene033273:intron | 25.0% |
| ! | CTTTGATGCAATAAAAAACA+AGG | + | chr8.4:20979641-20979660 | None:intergenic | 25.0% |
| ! | TAGCTTTCAAAAATGTTTCA+TGG | + | chr8.4:20978783-20978802 | None:intergenic | 25.0% |
| ! | TGACAAGAGCAAAAATATTA+AGG | + | chr8.4:20979339-20979358 | None:intergenic | 25.0% |
| ! | TGCAAGTATATACATAATAC+TGG | + | chr8.4:20977018-20977037 | None:intergenic | 25.0% |
| ! | TTTATGTATATCGGACTAAA+CGG | + | chr8.4:20978082-20978101 | None:intergenic | 25.0% |
| ! | TTTGTTAACAAAAATGCTAC+TGG | - | chr8.4:20978972-20978991 | MS.gene033273:intron | 25.0% |
| !! | ACATTTGCTACAAATTACTT+AGG | - | chr8.4:20977702-20977721 | MS.gene033273:CDS | 25.0% |
| !! | CAAATCTAAAGCTAAAAACT+CGG | + | chr8.4:20977303-20977322 | None:intergenic | 25.0% |
| !! | TGTCAATTCAATTTTCTCTT+CGG | + | chr8.4:20977685-20977704 | None:intergenic | 25.0% |
| !! | TTCTTAATTTTGCAGAGAAA+AGG | + | chr8.4:20979141-20979160 | None:intergenic | 25.0% |
| !! | TTTTCATTCTTACATATGAG+AGG | - | chr8.4:20977731-20977750 | MS.gene033273:CDS | 25.0% |
| !! | TTTTTACTATGCTTCATTCA+TGG | + | chr8.4:20977879-20977898 | None:intergenic | 25.0% |
| !!! | GTTTTGGAATTTTCAATTGA+AGG | - | chr8.4:20977086-20977105 | MS.gene033273:intron | 25.0% |
| AAAACTAAAGTAATGGTGCA+TGG | - | chr8.4:20978013-20978032 | MS.gene033273:intron | 30.0% | |
| AATAGAATAACCTCAGCATA+AGG | + | chr8.4:20977236-20977255 | None:intergenic | 30.0% | |
| AATGTACCTACCTAATTAGA+AGG | + | chr8.4:20977979-20977998 | None:intergenic | 30.0% | |
| AGGAATTATTAGAGCACATA+AGG | - | chr8.4:20979497-20979516 | MS.gene033273:CDS | 30.0% | |
| AGTGAAAGAAAAAATCCAAG+AGG | - | chr8.4:20977205-20977224 | MS.gene033273:CDS | 30.0% | |
| ATATATGTTTGCACTTTGCA+GGG | - | chr8.4:20979753-20979772 | MS.gene033273:intron | 30.0% | |
| ATCCGTTCGTAAAATATAAC+GGG | - | chr8.4:20978127-20978146 | MS.gene033273:intron | 30.0% | |
| ATTAAAATCCCTATTCACCA+TGG | + | chr8.4:20979733-20979752 | None:intergenic | 30.0% | |
| GATCCGTTCGTAAAATATAA+CGG | - | chr8.4:20978126-20978145 | MS.gene033273:intron | 30.0% | |
| GGAATTATTAGAGCACATAA+GGG | - | chr8.4:20979498-20979517 | MS.gene033273:CDS | 30.0% | |
| GTTAAGAGCTACAAACTAAA+GGG | + | chr8.4:20977809-20977828 | None:intergenic | 30.0% | |
| TATATATGTTTGCACTTTGC+AGG | - | chr8.4:20979752-20979771 | MS.gene033273:intron | 30.0% | |
| TGATTCATCAGTTGAGAAAA+GGG | - | chr8.4:20977391-20977410 | MS.gene033273:intron | 30.0% | |
| TGTTAAGAGCTACAAACTAA+AGG | + | chr8.4:20977810-20977829 | None:intergenic | 30.0% | |
| TTAGCACAACATGAATTAAC+AGG | + | chr8.4:20977591-20977610 | None:intergenic | 30.0% | |
| TTATGCTGAGGTTATTCTAT+TGG | - | chr8.4:20977235-20977254 | MS.gene033273:CDS | 30.0% | |
| TTATGTATATCGGACTAAAC+GGG | + | chr8.4:20978081-20978100 | None:intergenic | 30.0% | |
| TTCTTCAGTAATTCATAGCT+GGG | - | chr8.4:20979050-20979069 | MS.gene033273:CDS | 30.0% | |
| TTCTTGTGTTCTTAAATTGC+AGG | - | chr8.4:20978943-20978962 | MS.gene033273:intron | 30.0% | |
| TTGATTCATCAGTTGAGAAA+AGG | - | chr8.4:20977390-20977409 | MS.gene033273:intron | 30.0% | |
| TTGGGAAATAATTATAGGCA+AGG | - | chr8.4:20979427-20979446 | MS.gene033273:CDS | 30.0% | |
| TTTCTTCAGTAATTCATAGC+TGG | - | chr8.4:20979049-20979068 | MS.gene033273:CDS | 30.0% | |
| ! | AACCCGTTATATTTTACGAA+CGG | + | chr8.4:20978132-20978151 | None:intergenic | 30.0% |
| ! | CCGTTTAGACCTTTTTATTA+TGG | + | chr8.4:20978451-20978470 | None:intergenic | 30.0% |
| ! | TCTGACTACAATTTAAAACC+CGG | + | chr8.4:20977421-20977440 | None:intergenic | 30.0% |
| ! | TGTATTGTTCCATAGCTTTT+TGG | + | chr8.4:20979895-20979914 | None:intergenic | 30.0% |
| !! | TTCGTAAAATATAACGGGTT+GGG | - | chr8.4:20978132-20978151 | MS.gene033273:intron | 30.0% |
| AAAAAGGGAATCATCGATGA+AGG | - | chr8.4:20976756-20976775 | MS.gene033273:CDS | 35.0% | |
| AAAAGGGAATCATCGATGAA+GGG | - | chr8.4:20976757-20976776 | MS.gene033273:CDS | 35.0% | |
| AATCAGAAGCCAAAAAGCTA+TGG | - | chr8.4:20979883-20979902 | MS.gene033273:CDS | 35.0% | |
| ACGTGCGAGTTTATGTATAT+CGG | + | chr8.4:20978091-20978110 | None:intergenic | 35.0% | |
| AGAAAAGAATACCCACAGAT+AGG | - | chr8.4:20978874-20978893 | MS.gene033273:intron | 35.0% | |
| AGCACATAAGGGCTTAATAA+CGG | - | chr8.4:20979509-20979528 | MS.gene033273:CDS | 35.0% | |
| CACACGGACCAAAATTTAAA+TGG | - | chr8.4:20978477-20978496 | MS.gene033273:intron | 35.0% | |
| CGACTAAAACAAGCAACAAT+TGG | - | chr8.4:20979933-20979952 | MS.gene033273:CDS | 35.0% | |
| CTCTAAGCCAAAAAATCGAA+GGG | - | chr8.4:20979799-20979818 | MS.gene033273:intron | 35.0% | |
| CTTTAGCAGTCTAATTATGG+TGG | - | chr8.4:20978385-20978404 | MS.gene033273:intron | 35.0% | |
| GAGACAGACAAAATCATTCA+AGG | + | chr8.4:20977957-20977976 | None:intergenic | 35.0% | |
| GCAAATAAAACAGGCATTCA+AGG | - | chr8.4:20979012-20979031 | MS.gene033273:CDS | 35.0% | |
| GGTTGGCAACAAAAGAAAAA+GGG | - | chr8.4:20976741-20976760 | MS.gene033273:CDS | 35.0% | |
| GTGATTAATCAAGTATCCCA+GGG | - | chr8.4:20978739-20978758 | MS.gene033273:intron | 35.0% | |
| TAGAGAATCGTGATCAAATG+TGG | - | chr8.4:20977458-20977477 | MS.gene033273:CDS | 35.0% | |
| TATGTATATCGGACTAAACG+GGG | + | chr8.4:20978080-20978099 | None:intergenic | 35.0% | |
| TATTCATACATAGGTCACCT+AGG | + | chr8.4:20977919-20977938 | None:intergenic | 35.0% | |
| TCTAAGCCAAAAAATCGAAG+GGG | - | chr8.4:20979800-20979819 | MS.gene033273:intron | 35.0% | |
| TGATTAATCAAGTATCCCAG+GGG | - | chr8.4:20978740-20978759 | MS.gene033273:intron | 35.0% | |
| TGCAGAGAAAAGGAAACAAA+TGG | + | chr8.4:20979131-20979150 | None:intergenic | 35.0% | |
| TGGTTGGCAACAAAAGAAAA+AGG | - | chr8.4:20976740-20976759 | MS.gene033273:CDS | 35.0% | |
| TTGTCTGTCTCCTTCTAATT+AGG | - | chr8.4:20977966-20977985 | MS.gene033273:intron | 35.0% | |
| TTTCCAAACCATGGTGAATA+GGG | - | chr8.4:20979722-20979741 | MS.gene033273:intron | 35.0% | |
| ! | AGATACATGGTCTAGAATAG+AGG | + | chr8.4:20979971-20979990 | None:intergenic | 35.0% |
| ! | GAAGGGAACAATAAGGTATT+TGG | - | chr8.4:20976774-20976793 | MS.gene033273:CDS | 35.0% |
| ! | GATACATGGTCTAGAATAGA+GGG | + | chr8.4:20979970-20979989 | None:intergenic | 35.0% |
| ! | TTTTCCAAACCATGGTGAAT+AGG | - | chr8.4:20979721-20979740 | MS.gene033273:intron | 35.0% |
| !! | CATTTAAATTTTGGTCCGTG+TGG | + | chr8.4:20978479-20978498 | None:intergenic | 35.0% |
| !! | GTTCGTAAAATATAACGGGT+TGG | - | chr8.4:20978131-20978150 | MS.gene033273:intron | 35.0% |
| !! | TCGTAAAATATAACGGGTTG+GGG | - | chr8.4:20978133-20978152 | MS.gene033273:intron | 35.0% |
| !! | TTGTTTTGCAGAAACAATGC+AGG | - | chr8.4:20977633-20977652 | MS.gene033273:CDS | 35.0% |
| !!! | ATACTAGCTTGTTTTACCCA+CGG | + | chr8.4:20978189-20978208 | None:intergenic | 35.0% |
| !!! | GGGCTTTGAACCAATTTTTT+TGG | + | chr8.4:20978504-20978523 | None:intergenic | 35.0% |
| !!! | TACCTTTGTTTTCCAAACCA+TGG | - | chr8.4:20979713-20979732 | MS.gene033273:intron | 35.0% |
| !!! | TTTCATGGACAGCCATTTTT+TGG | + | chr8.4:20978768-20978787 | None:intergenic | 35.0% |
| AAAAAATCGAAGGGGTGAGT+GGG | - | chr8.4:20979808-20979827 | MS.gene033273:intron | 40.0% | |
| AAAAAGAGGAGTGAGAGTTG+TGG | - | chr8.4:20977151-20977170 | MS.gene033273:intron | 40.0% | |
| AATCCCTATTCACCATGGTT+TGG | + | chr8.4:20979728-20979747 | None:intergenic | 40.0% | |
| AGATTTGCGACTGCAATCTA+GGG | + | chr8.4:20977551-20977570 | None:intergenic | 40.0% | |
| ATGAGAGCTGTTAGGTTTGA+AGG | + | chr8.4:20976877-20976896 | None:intergenic | 40.0% | |
| CATCGATGAAGGGAACAATA+AGG | - | chr8.4:20976767-20976786 | MS.gene033273:CDS | 40.0% | |
| CGTGATTAATCAAGTATCCC+AGG | - | chr8.4:20978738-20978757 | MS.gene033273:intron | 40.0% | |
| CTGTCTCCTTCTAATTAGGT+AGG | - | chr8.4:20977970-20977989 | MS.gene033273:intron | 40.0% | |
| GAATTTGAGCCAAAACCACT+AGG | + | chr8.4:20976814-20976833 | None:intergenic | 40.0% | |
| GATTCTGCATGTGAAGGAAA+TGG | - | chr8.4:20979269-20979288 | MS.gene033273:intron | 40.0% | |
| GCACATAAGGGCTTAATAAC+GGG | - | chr8.4:20979510-20979529 | MS.gene033273:CDS | 40.0% | |
| GGAAATGGCTAGACAACTAA+AGG | - | chr8.4:20979284-20979303 | MS.gene033273:intron | 40.0% | |
| GGGTAAAACAAGCTAGTATG+AGG | - | chr8.4:20978190-20978209 | MS.gene033273:intron | 40.0% | |
| GTGTGGAATTCATATTCTGC+TGG | + | chr8.4:20977787-20977806 | None:intergenic | 40.0% | |
| TATCCACCTCTAACAAAGAG+TGG | + | chr8.4:20978043-20978062 | None:intergenic | 40.0% | |
| TGAGAGCTGTTAGGTTTGAA+GGG | + | chr8.4:20976876-20976895 | None:intergenic | 40.0% | |
| TTCCTTCACATGCAGAATCA+TGG | + | chr8.4:20979268-20979287 | None:intergenic | 40.0% | |
| TTTGTTAGAGGTGGATACTC+TGG | - | chr8.4:20978046-20978065 | MS.gene033273:intron | 40.0% | |
| ! | CACCATGGTTTGGAAAACAA+AGG | + | chr8.4:20979718-20979737 | None:intergenic | 40.0% |
| ! | GCTAGAGTGTTAGCAAAAAG+AGG | - | chr8.4:20977137-20977156 | MS.gene033273:intron | 40.0% |
| ! | GCTCTAAGCCAAAAAATCGA+AGG | - | chr8.4:20979798-20979817 | MS.gene033273:intron | 40.0% |
| ! | GGAACAATAAGGTATTTGGC+AGG | - | chr8.4:20976778-20976797 | MS.gene033273:CDS | 40.0% |
| ! | TTTGTACTGTGTTGATCCGT+GGG | - | chr8.4:20978170-20978189 | MS.gene033273:intron | 40.0% |
| ! | TTTTCTCTTCGGAGAATTCC+AGG | + | chr8.4:20977674-20977693 | None:intergenic | 40.0% |
| !! | TAAATTTTGGTCCGTGTGGT+TGG | + | chr8.4:20978475-20978494 | None:intergenic | 40.0% |
| !! | TCAATTGAAGGTGCTACTTC+TGG | - | chr8.4:20977098-20977117 | MS.gene033273:intron | 40.0% |
| !! | TGCTTTAAAGACATGCTCAC+TGG | - | chr8.4:20979090-20979109 | MS.gene033273:intron | 40.0% |
| AACCTAACAGCTCTCATCAC+TGG | - | chr8.4:20976880-20976899 | MS.gene033273:CDS | 45.0% | |
| ACTATCAATGCAGTGCATCC+AGG | - | chr8.4:20979462-20979481 | MS.gene033273:CDS | 45.0% | |
| AGCCATGATTCTGCATGTGA+AGG | - | chr8.4:20979263-20979282 | MS.gene033273:intron | 45.0% | |
| AGTTGAGAAAAGGGAGATCC+GGG | - | chr8.4:20977400-20977419 | MS.gene033273:intron | 45.0% | |
| ATAGGCAACAGAGAGGGATT+TGG | - | chr8.4:20978892-20978911 | MS.gene033273:intron | 45.0% | |
| ATTCCTGTCTTCACAATGCC+TGG | + | chr8.4:20979483-20979502 | None:intergenic | 45.0% | |
| CAAAAAATCGAAGGGGTGAG+TGG | - | chr8.4:20979807-20979826 | MS.gene033273:intron | 45.0% | |
| CAGTTGAGAAAAGGGAGATC+CGG | - | chr8.4:20977399-20977418 | MS.gene033273:intron | 45.0% | |
| GAGATTTGCGACTGCAATCT+AGG | + | chr8.4:20977552-20977571 | None:intergenic | 45.0% | |
| GAGCTACAAACTAAAGGGTG+TGG | + | chr8.4:20977804-20977823 | None:intergenic | 45.0% | |
| GCTGCTCAAAACGATATCAC+AGG | - | chr8.4:20979660-20979679 | MS.gene033273:intron | 45.0% | |
| TACCAGTGATGAGAGCTGTT+AGG | + | chr8.4:20976885-20976904 | None:intergenic | 45.0% | |
| TGAACAAGTCCGTTAACACG+CGG | + | chr8.4:20978534-20978553 | None:intergenic | 45.0% | |
| TTAGAGGTGGATACTCTGGT+TGG | - | chr8.4:20978050-20978069 | MS.gene033273:intron | 45.0% | |
| TTAGGCTCAAACAGAGTCCT+AGG | - | chr8.4:20977899-20977918 | MS.gene033273:intron | 45.0% | |
| ! | AAATTGGTTCAAAGCCCCTG+TGG | - | chr8.4:20978507-20978526 | MS.gene033273:intron | 45.0% |
| ! | AGGAGTGTACTCTCATAACC+TGG | - | chr8.4:20977653-20977672 | MS.gene033273:CDS | 45.0% |
| ! | GTTTGTACTGTGTTGATCCG+TGG | - | chr8.4:20978169-20978188 | MS.gene033273:intron | 45.0% |
| !! | ATCCCAGGGGTACCAAAAAA+TGG | - | chr8.4:20978753-20978772 | MS.gene033273:intron | 45.0% |
| !! | CATAGCCTTTTTCATGTCCC+TGG | + | chr8.4:20977183-20977202 | None:intergenic | 45.0% |
| !! | GAAGGTGCTACTTCTGGTAT+TGG | - | chr8.4:20977104-20977123 | MS.gene033273:intron | 45.0% |
| !!! | AGCCATTTTTTGGTACCCCT+GGG | + | chr8.4:20978758-20978777 | None:intergenic | 45.0% |
| !!! | CACTCACCCCTTCGATTTTT+TGG | + | chr8.4:20979809-20979828 | None:intergenic | 45.0% |
| AGAGGAGAGTCCTTATGCTG+AGG | - | chr8.4:20977223-20977242 | MS.gene033273:CDS | 50.0% | |
| AGAGGAGTGAGAGTTGTGGT+TGG | - | chr8.4:20977155-20977174 | MS.gene033273:intron | 50.0% | |
| CAGCATAAGGACTCTCCTCT+TGG | + | chr8.4:20977223-20977242 | None:intergenic | 50.0% | |
| CAGCCACTCTTTGTTAGAGG+TGG | - | chr8.4:20978037-20978056 | MS.gene033273:intron | 50.0% | |
| CCACAGATAGGCAACAGAGA+GGG | - | chr8.4:20978886-20978905 | MS.gene033273:intron | 50.0% | |
| CCTCTCTGTTGCCTATCTGT+GGG | + | chr8.4:20978888-20978907 | None:intergenic | 50.0% | |
| GAGCTGTTAGGTTTGAAGGG+AGG | + | chr8.4:20976873-20976892 | None:intergenic | 50.0% | |
| GGACAGCCACTCTTTGTTAG+AGG | - | chr8.4:20978034-20978053 | MS.gene033273:intron | 50.0% | |
| GTATATCGGACTAAACGGGG+CGG | + | chr8.4:20978077-20978096 | None:intergenic | 50.0% | |
| GTCTAAACGGTCCAACCACA+CGG | - | chr8.4:20978461-20978480 | MS.gene033273:intron | 50.0% | |
| TATATCGGACTAAACGGGGC+GGG | + | chr8.4:20978076-20978095 | None:intergenic | 50.0% | |
| ! | AGGTATTTGGCAGGCATTGC+AGG | - | chr8.4:20976787-20976806 | MS.gene033273:CDS | 50.0% |
| ! | ATTGCAGGGCCTAGTGGTTT+TGG | - | chr8.4:20976802-20976821 | MS.gene033273:CDS | 50.0% |
| ! | CATCCAGGCATTGTGAAGAC+AGG | - | chr8.4:20979477-20979496 | MS.gene033273:CDS | 50.0% |
| ! | GGTATTTGGCAGGCATTGCA+GGG | - | chr8.4:20976788-20976807 | MS.gene033273:CDS | 50.0% |
| ! | TGGTGCCAGGGACATGAAAA+AGG | - | chr8.4:20977175-20977194 | MS.gene033273:intron | 50.0% |
| !!! | CAGCCATTTTTTGGTACCCC+TGG | + | chr8.4:20978759-20978778 | None:intergenic | 50.0% |
| CCCACAGATAGGCAACAGAG+AGG | - | chr8.4:20978885-20978904 | MS.gene033273:intron | 55.0% | |
| CCCTCTCTGTTGCCTATCTG+TGG | + | chr8.4:20978889-20978908 | None:intergenic | 55.0% | |
| ! | TGAGAGTTGTGGTTGGTGCC+AGG | - | chr8.4:20977162-20977181 | MS.gene033273:intron | 55.0% |
| !! | GAGAGTTGTGGTTGGTGCCA+GGG | - | chr8.4:20977163-20977182 | MS.gene033273:intron | 55.0% |
| CCCTGTGGACCGCGTGTTAA+CGG | - | chr8.4:20978522-20978541 | MS.gene033273:intron | 60.0% | |
| CCGTTAACACGCGGTCCACA+GGG | + | chr8.4:20978525-20978544 | None:intergenic | 60.0% | |
| CGTTAACACGCGGTCCACAG+GGG | + | chr8.4:20978524-20978543 | None:intergenic | 60.0% | |
| TCCGTTAACACGCGGTCCAC+AGG | + | chr8.4:20978526-20978545 | None:intergenic | 60.0% | |
| ! | GCAGGCATTGCAGGGCCTAG+TGG | - | chr8.4:20976796-20976815 | MS.gene033273:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 20976739 | 20979992 | 20976739 | ID=MS.gene033273 |
| chr8.4 | mRNA | 20976739 | 20979992 | 20976739 | ID=MS.gene033273.t1;Parent=MS.gene033273 |
| chr8.4 | exon | 20979830 | 20979992 | 20979830 | ID=MS.gene033273.t1.exon1;Parent=MS.gene033273.t1 |
| chr8.4 | CDS | 20979830 | 20979992 | 20979830 | ID=cds.MS.gene033273.t1;Parent=MS.gene033273.t1 |
| chr8.4 | exon | 20979392 | 20979623 | 20979392 | ID=MS.gene033273.t1.exon2;Parent=MS.gene033273.t1 |
| chr8.4 | CDS | 20979392 | 20979623 | 20979392 | ID=cds.MS.gene033273.t1;Parent=MS.gene033273.t1 |
| chr8.4 | exon | 20979008 | 20979087 | 20979008 | ID=MS.gene033273.t1.exon3;Parent=MS.gene033273.t1 |
| chr8.4 | CDS | 20979008 | 20979087 | 20979008 | ID=cds.MS.gene033273.t1;Parent=MS.gene033273.t1 |
| chr8.4 | exon | 20977613 | 20977766 | 20977613 | ID=MS.gene033273.t1.exon4;Parent=MS.gene033273.t1 |
| chr8.4 | CDS | 20977613 | 20977766 | 20977613 | ID=cds.MS.gene033273.t1;Parent=MS.gene033273.t1 |
| chr8.4 | exon | 20977426 | 20977504 | 20977426 | ID=MS.gene033273.t1.exon5;Parent=MS.gene033273.t1 |
| chr8.4 | CDS | 20977426 | 20977504 | 20977426 | ID=cds.MS.gene033273.t1;Parent=MS.gene033273.t1 |
| chr8.4 | exon | 20977200 | 20977287 | 20977200 | ID=MS.gene033273.t1.exon6;Parent=MS.gene033273.t1 |
| chr8.4 | CDS | 20977200 | 20977287 | 20977200 | ID=cds.MS.gene033273.t1;Parent=MS.gene033273.t1 |
| chr8.4 | exon | 20977050 | 20977096 | 20977050 | ID=MS.gene033273.t1.exon7;Parent=MS.gene033273.t1 |
| chr8.4 | CDS | 20977050 | 20977096 | 20977050 | ID=cds.MS.gene033273.t1;Parent=MS.gene033273.t1 |
| chr8.4 | exon | 20976739 | 20976957 | 20976739 | ID=MS.gene033273.t1.exon8;Parent=MS.gene033273.t1 |
| chr8.4 | CDS | 20976739 | 20976957 | 20976739 | ID=cds.MS.gene033273.t1;Parent=MS.gene033273.t1 |
| Gene Sequence |
| Protein sequence |
