Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061155.t1 | XP_013469643.1 | 99 | 315 | 3 | 0 | 1 | 315 | 1 | 315 | 6.00E-173 | 616.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061155.t1 | Q6RVV4 | 80.7 | 316 | 60 | 1 | 1 | 315 | 1 | 316 | 1.2e-145 | 517.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061155.t1 | A0A072VPT5 | 99.0 | 315 | 3 | 0 | 1 | 315 | 1 | 315 | 4.3e-173 | 616.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061155 | MS.gene34138 | 0.932567 | 7.01E-95 | -1.69E-46 |
| MS.gene061155 | MS.gene49120 | 0.869968 | 2.08E-66 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061155.t1 | MTR_1g100315 | 99.048 | 315 | 3 | 0 | 1 | 315 | 1 | 315 | 0.0 | 643 |
| MS.gene061155.t1 | MTR_1g100305 | 82.540 | 315 | 55 | 0 | 1 | 315 | 1 | 315 | 0.0 | 555 |
| MS.gene061155.t1 | MTR_1g100395 | 84.936 | 312 | 47 | 0 | 1 | 312 | 1 | 312 | 0.0 | 548 |
| MS.gene061155.t1 | MTR_1g100335 | 83.810 | 315 | 51 | 0 | 1 | 315 | 1 | 315 | 0.0 | 545 |
| MS.gene061155.t1 | MTR_8g098415 | 69.524 | 315 | 96 | 0 | 1 | 315 | 1 | 315 | 9.05e-163 | 456 |
| MS.gene061155.t1 | MTR_8g098415 | 70.455 | 308 | 91 | 0 | 1 | 308 | 1 | 308 | 1.79e-161 | 452 |
| MS.gene061155.t1 | MTR_6g053550 | 70.033 | 307 | 89 | 1 | 10 | 313 | 18 | 324 | 2.73e-155 | 437 |
| MS.gene061155.t1 | MTR_1g100335 | 84.146 | 246 | 39 | 0 | 1 | 246 | 1 | 246 | 3.76e-151 | 425 |
| MS.gene061155.t1 | MTR_1g100335 | 84.146 | 246 | 39 | 0 | 1 | 246 | 1 | 246 | 4.09e-151 | 424 |
| MS.gene061155.t1 | MTR_8g098415 | 70.472 | 254 | 75 | 0 | 58 | 311 | 1 | 254 | 2.48e-132 | 377 |
| MS.gene061155.t1 | MTR_1g068970 | 58.689 | 305 | 126 | 0 | 8 | 312 | 13 | 317 | 8.02e-129 | 370 |
| MS.gene061155.t1 | MTR_7g099850 | 58.497 | 306 | 126 | 1 | 8 | 312 | 13 | 318 | 6.54e-128 | 368 |
| MS.gene061155.t1 | MTR_6g053600 | 67.557 | 262 | 82 | 1 | 10 | 268 | 4 | 265 | 4.40e-124 | 357 |
| MS.gene061155.t1 | MTR_8g098415 | 74.429 | 219 | 56 | 0 | 1 | 219 | 1 | 219 | 1.09e-116 | 335 |
| MS.gene061155.t1 | MTR_1g068970 | 57.490 | 247 | 105 | 0 | 66 | 312 | 4 | 250 | 1.72e-101 | 298 |
| MS.gene061155.t1 | MTR_3g077410 | 43.910 | 312 | 171 | 2 | 8 | 315 | 13 | 324 | 1.08e-85 | 261 |
| MS.gene061155.t1 | MTR_8g099995 | 45.307 | 309 | 165 | 3 | 8 | 312 | 13 | 321 | 5.32e-85 | 259 |
| MS.gene061155.t1 | MTR_4g105310 | 42.949 | 312 | 174 | 2 | 8 | 315 | 24 | 335 | 3.28e-80 | 247 |
| MS.gene061155.t1 | MTR_4g105310 | 44.856 | 243 | 130 | 2 | 8 | 246 | 24 | 266 | 6.30e-62 | 198 |
| MS.gene061155.t1 | MTR_6g081020 | 29.605 | 304 | 185 | 9 | 30 | 312 | 62 | 357 | 1.22e-26 | 108 |
| MS.gene061155.t1 | MTR_1g100345 | 63.514 | 74 | 27 | 0 | 33 | 106 | 4 | 77 | 1.95e-26 | 100 |
| MS.gene061155.t1 | MTR_6g041980 | 27.820 | 266 | 170 | 5 | 25 | 285 | 62 | 310 | 1.45e-25 | 104 |
| MS.gene061155.t1 | MTR_2g079710 | 29.393 | 313 | 186 | 10 | 31 | 312 | 88 | 396 | 2.08e-22 | 96.7 |
| MS.gene061155.t1 | MTR_3g091070 | 28.477 | 302 | 168 | 11 | 32 | 312 | 43 | 317 | 2.50e-20 | 90.1 |
| MS.gene061155.t1 | MTR_6g453040 | 29.139 | 302 | 184 | 10 | 32 | 312 | 43 | 335 | 2.76e-19 | 87.4 |
| MS.gene061155.t1 | MTR_6g041980 | 28.866 | 194 | 131 | 2 | 25 | 218 | 62 | 248 | 1.00e-18 | 84.7 |
| MS.gene061155.t1 | MTR_3g009190 | 29.139 | 302 | 184 | 10 | 32 | 312 | 65 | 357 | 1.43e-18 | 85.5 |
| MS.gene061155.t1 | MTR_3g009190 | 29.139 | 302 | 184 | 10 | 32 | 312 | 83 | 375 | 1.97e-18 | 85.5 |
| MS.gene061155.t1 | MTR_3g009190 | 29.236 | 301 | 183 | 11 | 33 | 312 | 65 | 356 | 2.76e-16 | 79.0 |
| MS.gene061155.t1 | MTR_4g087460 | 28.512 | 242 | 139 | 6 | 32 | 239 | 24 | 265 | 3.14e-13 | 69.3 |
| MS.gene061155.t1 | MTR_6g453040 | 30.049 | 203 | 121 | 6 | 32 | 220 | 65 | 260 | 9.74e-12 | 65.1 |
| MS.gene061155.t1 | MTR_8g022500 | 35.398 | 113 | 48 | 2 | 34 | 146 | 431 | 518 | 2.77e-11 | 64.7 |
| MS.gene061155.t1 | MTR_6g453040 | 30.108 | 186 | 111 | 5 | 32 | 203 | 65 | 245 | 3.58e-11 | 62.8 |
| MS.gene061155.t1 | MTR_7g076660 | 26.280 | 293 | 152 | 9 | 32 | 283 | 9 | 278 | 9.65e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061155.t1 | AT4G11410 | 71.111 | 315 | 91 | 0 | 1 | 315 | 1 | 315 | 3.31e-168 | 470 |
| MS.gene061155.t1 | AT4G23420 | 71.154 | 312 | 89 | 1 | 1 | 311 | 1 | 312 | 1.35e-166 | 466 |
| MS.gene061155.t1 | AT4G23420 | 71.154 | 312 | 89 | 1 | 1 | 311 | 1 | 312 | 1.35e-166 | 466 |
| MS.gene061155.t1 | AT4G23430 | 70.513 | 312 | 91 | 1 | 1 | 311 | 1 | 312 | 3.38e-166 | 465 |
| MS.gene061155.t1 | AT4G23420 | 70.323 | 310 | 91 | 1 | 3 | 311 | 20 | 329 | 2.93e-163 | 458 |
| MS.gene061155.t1 | AT4G23430 | 69.872 | 312 | 91 | 2 | 1 | 311 | 1 | 310 | 8.81e-163 | 456 |
| MS.gene061155.t1 | AT4G23430 | 67.628 | 312 | 90 | 2 | 1 | 311 | 1 | 302 | 5.13e-156 | 439 |
| MS.gene061155.t1 | AT4G23430 | 66.987 | 312 | 90 | 3 | 1 | 311 | 1 | 300 | 1.01e-152 | 430 |
| MS.gene061155.t1 | AT4G23420 | 71.756 | 262 | 73 | 1 | 1 | 261 | 1 | 262 | 3.23e-138 | 392 |
| MS.gene061155.t1 | AT4G23420 | 73.279 | 247 | 65 | 1 | 1 | 246 | 1 | 247 | 1.84e-132 | 377 |
| MS.gene061155.t1 | AT4G11410 | 73.878 | 245 | 64 | 0 | 1 | 245 | 1 | 245 | 1.48e-130 | 372 |
| MS.gene061155.t1 | AT2G37540 | 55.700 | 307 | 136 | 0 | 6 | 312 | 10 | 316 | 2.68e-125 | 361 |
| MS.gene061155.t1 | AT5G02540 | 59.283 | 307 | 125 | 0 | 6 | 312 | 10 | 316 | 2.47e-124 | 359 |
| MS.gene061155.t1 | AT2G37540 | 58.051 | 236 | 99 | 0 | 6 | 241 | 10 | 245 | 3.38e-99 | 293 |
| MS.gene061155.t1 | AT4G24050 | 45.779 | 308 | 164 | 2 | 8 | 312 | 13 | 320 | 4.94e-87 | 264 |
| MS.gene061155.t1 | AT5G50130 | 46.945 | 311 | 161 | 3 | 8 | 314 | 13 | 323 | 1.22e-85 | 261 |
| MS.gene061155.t1 | AT5G50130 | 46.809 | 282 | 149 | 1 | 34 | 314 | 8 | 289 | 1.86e-79 | 244 |
| MS.gene061155.t1 | AT5G50130 | 46.996 | 283 | 148 | 2 | 34 | 314 | 8 | 290 | 9.99e-79 | 242 |
| MS.gene061155.t1 | AT1G64590 | 45.485 | 299 | 160 | 2 | 17 | 312 | 22 | 320 | 4.83e-76 | 236 |
| MS.gene061155.t1 | AT4G24050 | 45.455 | 264 | 139 | 3 | 8 | 268 | 13 | 274 | 7.05e-71 | 221 |
| MS.gene061155.t1 | AT5G50130 | 45.660 | 265 | 140 | 3 | 8 | 268 | 13 | 277 | 1.55e-69 | 219 |
| MS.gene061155.t1 | AT5G50130 | 45.865 | 266 | 139 | 4 | 8 | 268 | 13 | 278 | 7.87e-69 | 218 |
| MS.gene061155.t1 | AT5G50130 | 49.145 | 234 | 117 | 1 | 8 | 239 | 13 | 246 | 1.68e-68 | 214 |
| MS.gene061155.t1 | AT5G50130 | 49.362 | 235 | 116 | 2 | 8 | 239 | 13 | 247 | 6.94e-68 | 213 |
| MS.gene061155.t1 | AT5G50130 | 45.570 | 237 | 127 | 2 | 34 | 268 | 8 | 244 | 9.42e-63 | 201 |
| MS.gene061155.t1 | AT5G50130 | 45.798 | 238 | 126 | 3 | 34 | 268 | 8 | 245 | 4.11e-62 | 199 |
| MS.gene061155.t1 | AT4G27760 | 32.039 | 309 | 169 | 9 | 30 | 312 | 58 | 351 | 3.45e-28 | 112 |
| MS.gene061155.t1 | AT5G54190 | 29.904 | 311 | 183 | 10 | 33 | 312 | 96 | 402 | 2.05e-27 | 110 |
| MS.gene061155.t1 | AT4G09750 | 27.303 | 304 | 195 | 7 | 4 | 302 | 20 | 302 | 1.98e-26 | 106 |
| MS.gene061155.t1 | AT1G03630 | 33.439 | 314 | 171 | 12 | 31 | 312 | 89 | 396 | 9.59e-26 | 106 |
| MS.gene061155.t1 | AT1G03630 | 33.439 | 314 | 171 | 12 | 31 | 312 | 91 | 398 | 1.17e-25 | 105 |
| MS.gene061155.t1 | AT5G04070 | 29.693 | 293 | 184 | 8 | 32 | 308 | 61 | 347 | 1.60e-23 | 99.4 |
| MS.gene061155.t1 | AT4G27440 | 30.547 | 311 | 181 | 10 | 33 | 312 | 92 | 398 | 2.00e-23 | 99.8 |
| MS.gene061155.t1 | AT4G27440 | 30.547 | 311 | 181 | 10 | 33 | 312 | 92 | 398 | 2.00e-23 | 99.8 |
| MS.gene061155.t1 | AT5G53100 | 32.026 | 306 | 176 | 11 | 30 | 312 | 45 | 341 | 4.88e-23 | 98.2 |
| MS.gene061155.t1 | AT5G53090 | 29.900 | 301 | 186 | 6 | 30 | 312 | 57 | 350 | 1.88e-22 | 96.7 |
| MS.gene061155.t1 | AT5G15940 | 27.907 | 301 | 193 | 10 | 32 | 314 | 63 | 357 | 8.17e-21 | 92.0 |
| MS.gene061155.t1 | AT5G15940 | 27.907 | 301 | 193 | 10 | 32 | 314 | 63 | 357 | 8.17e-21 | 92.0 |
| MS.gene061155.t1 | AT5G15940 | 27.907 | 301 | 193 | 10 | 32 | 314 | 62 | 356 | 9.10e-21 | 91.7 |
| MS.gene061155.t1 | AT5G54190 | 27.368 | 285 | 173 | 9 | 58 | 312 | 1 | 281 | 1.70e-19 | 87.0 |
| MS.gene061155.t1 | AT5G15940 | 27.477 | 222 | 144 | 5 | 32 | 240 | 63 | 280 | 2.99e-15 | 75.5 |
| MS.gene061155.t1 | AT5G51030 | 27.055 | 292 | 152 | 13 | 32 | 285 | 40 | 308 | 6.52e-12 | 65.9 |
| MS.gene061155.t1 | AT5G61830 | 33.333 | 144 | 83 | 5 | 32 | 170 | 39 | 174 | 3.50e-11 | 63.5 |
| MS.gene061155.t1 | AT5G61830 | 33.333 | 144 | 83 | 5 | 32 | 170 | 39 | 174 | 3.50e-11 | 63.5 |
Find 65 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGCAGGAAAGGGGTATC+TGG | 0.244871 | 1.4:-77860021 | MS.gene061155:CDS |
| CTCTTTAAGTATTGCTTCTC+TGG | 0.294320 | 1.4:+77859473 | None:intergenic |
| CACTAATTCCCTTCACTTGT+GGG | 0.304068 | 1.4:+77854805 | None:intergenic |
| ACATGGTGTCCATGTGATTA+TGG | 0.307075 | 1.4:-77859526 | MS.gene061155:CDS |
| GATTATGGCTGTTAGAAATA+AGG | 0.314737 | 1.4:-77859511 | MS.gene061155:CDS |
| CTGATTTGGCTAAGAAACTT+TGG | 0.324819 | 1.4:-77854728 | MS.gene061155:CDS |
| ACATGGGAGGGATGCTGATT+TGG | 0.329130 | 1.4:-77854742 | MS.gene061155:CDS |
| TTGTATACAGTTACAGCAAA+TGG | 0.345777 | 1.4:-77856927 | MS.gene061155:intron |
| CCTCCCATGTGAACTTGATT+TGG | 0.351212 | 1.4:+77854755 | None:intergenic |
| CCAGCTTACAAAACATTTCA+AGG | 0.374757 | 1.4:-77856860 | MS.gene061155:intron |
| GGAGTTAGATCTCAGTTCAT+TGG | 0.382633 | 1.4:-77859424 | MS.gene061155:CDS |
| CTGTAGTTCGATGTTGTCAT+TGG | 0.387818 | 1.4:+77858666 | None:intergenic |
| ACGCGTGTTCTTGCTTTACA+TGG | 0.389431 | 1.4:-77859543 | MS.gene061155:CDS |
| TGATTTGGCTAAGAAACTTT+GGG | 0.394881 | 1.4:-77854727 | MS.gene061155:CDS |
| CCACTAATTCCCTTCACTTG+TGG | 0.410260 | 1.4:+77854804 | None:intergenic |
| TACAGCAAATGGGGTGCATA+TGG | 0.428773 | 1.4:-77856916 | MS.gene061155:CDS |
| ACAGGAGCATCCAGTGGTAT+TGG | 0.435914 | 1.4:-77859576 | MS.gene061155:intron |
| GCATCCGAATTTAATTCCTC+TGG | 0.439216 | 1.4:-77859384 | MS.gene061155:CDS |
| TGTATACAGTTACAGCAAAT+GGG | 0.440853 | 1.4:-77856926 | MS.gene061155:intron |
| TCTTACATCAAGATGTTCAA+TGG | 0.449454 | 1.4:+77859357 | None:intergenic |
| TTTCAGCATGAATTTGATCA+AGG | 0.454975 | 1.4:-77854703 | MS.gene061155:CDS |
| AAGACCAGAGGAATTAAATT+CGG | 0.474997 | 1.4:+77859380 | None:intergenic |
| CCACAAGTGAAGGGAATTAG+TGG | 0.477838 | 1.4:-77854804 | MS.gene061155:CDS |
| AGATTGGTGGCAATGCCTCC+TGG | 0.478554 | 1.4:+77856155 | None:intergenic |
| ACAAAATTAATGAACAATCA+AGG | 0.483699 | 1.4:-77858078 | MS.gene061155:intron |
| TGTGGCCATTCAGCAGGAAA+GGG | 0.484540 | 1.4:-77860029 | MS.gene061155:CDS |
| ACTCATGGAATTGATGCAAC+TGG | 0.489575 | 1.4:-77859967 | MS.gene061155:CDS |
| TGCAAATTTGTGAGCTTCTG+AGG | 0.489977 | 1.4:+77858123 | None:intergenic |
| TCAGCAGGAAAGGGGTATCT+GGG | 0.495041 | 1.4:-77860020 | MS.gene061155:CDS |
| GCATCATGTGGCCATTCAGC+AGG | 0.496748 | 1.4:-77860035 | None:intergenic |
| CACAAATTTGCATATTCTGA+AGG | 0.498869 | 1.4:-77858112 | MS.gene061155:CDS |
| TTGTCATTGGAAAGCATGAA+AGG | 0.519351 | 1.4:+77858679 | None:intergenic |
| GATACCCCTTTCCTGCTGAA+TGG | 0.522828 | 1.4:+77860024 | None:intergenic |
| CGTTGATTGCACTGTTATGA+CGG | 0.522998 | 1.4:+77856129 | None:intergenic |
| ATGTGGCCATTCAGCAGGAA+AGG | 0.530864 | 1.4:-77860030 | MS.gene061155:CDS |
| TTACATCTTGATCAGGATGA+TGG | 0.532570 | 1.4:-77856206 | MS.gene061155:intron |
| ATGTTTCACAAATACCTAAG+TGG | 0.533317 | 1.4:+77858632 | None:intergenic |
| ATTGCAAATTCTCTTCATCC+AGG | 0.533827 | 1.4:-77856173 | MS.gene061155:CDS |
| GGCCTCACTGCTATTGTCAC+TGG | 0.537638 | 1.4:-77859946 | MS.gene061155:intron |
| CAGTTTGCGACAAACCACTT+AGG | 0.544627 | 1.4:-77858646 | MS.gene061155:intron |
| AGCATTGCACCCACAAGTGA+AGG | 0.549189 | 1.4:-77854814 | MS.gene061155:CDS |
| ACTGTTATGACGGTAAAGAT+TGG | 0.555502 | 1.4:+77856139 | None:intergenic |
| CAAATCAAGTTCACATGGGA+GGG | 0.557158 | 1.4:-77854754 | MS.gene061155:CDS |
| GTAATTGGAAGAAACAATGC+AGG | 0.558972 | 1.4:-77858715 | MS.gene061155:intron |
| AAGAAACAATGCAGGAGTCA+TGG | 0.567107 | 1.4:-77858707 | MS.gene061155:CDS |
| AGTCTCAACTCCAATACCAC+TGG | 0.568579 | 1.4:+77859566 | None:intergenic |
| ACAGCTGAAGAAGTTACTCA+TGG | 0.574245 | 1.4:-77859982 | MS.gene061155:CDS |
| TGCAACAGGTATAGTAAATG+TGG | 0.575815 | 1.4:-77855066 | MS.gene061155:intron |
| TGTCATTGGAAAGCATGAAA+GGG | 0.579731 | 1.4:+77858680 | None:intergenic |
| GCTAGTGAAAGTAAGACTGA+AGG | 0.596766 | 1.4:-77858163 | MS.gene061155:CDS |
| GTTATGACGGTAAAGATTGG+TGG | 0.599227 | 1.4:+77856142 | None:intergenic |
| TGGGTGCAATGCTACATAGC+AGG | 0.602362 | 1.4:+77854824 | None:intergenic |
| GTGGCCAAATCAAGTTCACA+TGG | 0.609154 | 1.4:-77854759 | MS.gene061155:CDS |
| ACAGGTATAGTAAATGTGGT+TGG | 0.612281 | 1.4:-77855062 | MS.gene061155:intron |
| CCAAATCAAGTTCACATGGG+AGG | 0.616347 | 1.4:-77854755 | MS.gene061155:CDS |
| TTCTAACAGCCATAATCACA+TGG | 0.621462 | 1.4:+77859517 | None:intergenic |
| GCATTGCACCCACAAGTGAA+GGG | 0.624705 | 1.4:-77854813 | MS.gene061155:CDS |
| CGTCATAACAGTGCAATCAA+CGG | 0.644536 | 1.4:-77856128 | MS.gene061155:intron |
| GTGGCCATTCAGCAGGAAAG+GGG | 0.656505 | 1.4:-77860028 | MS.gene061155:CDS |
| GTATACAGTTACAGCAAATG+GGG | 0.659776 | 1.4:-77856925 | MS.gene061155:intron |
| GATGTTCAATGGAAGACCAG+AGG | 0.666537 | 1.4:+77859368 | None:intergenic |
| ATGTTAACAGGAGCATCCAG+TGG | 0.683391 | 1.4:-77859582 | MS.gene061155:intron |
| GCAAATTCTCTTCATCCAGG+AGG | 0.683556 | 1.4:-77856170 | MS.gene061155:CDS |
| TGGCCAAATCAAGTTCACAT+GGG | 0.718809 | 1.4:-77854758 | MS.gene061155:CDS |
| TACCAGTGACAATAGCAGTG+AGG | 0.758013 | 1.4:+77859944 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGAAAAATAAACAAAA+AGG | + | chr1.4:77854833-77854852 | None:intergenic | 10.0% |
| !! | AAATGAAAAATAAACAAAAA+GGG | + | chr1.4:77854832-77854851 | None:intergenic | 10.0% |
| !! | ATCTAATAATATTATGATTA+AGG | - | chr1.4:77858894-77858913 | MS.gene061155:intron | 10.0% |
| !! | CAAAATAAATAGTAAATAAA+AGG | + | chr1.4:77855865-77855884 | None:intergenic | 10.0% |
| !! | TTAATCATAATATTATTAGA+TGG | + | chr1.4:77858895-77858914 | None:intergenic | 10.0% |
| !!! | TCTTATTATCAATTTTATTT+AGG | - | chr1.4:77855408-77855427 | MS.gene061155:intron | 10.0% |
| !! | AATAATATTATGATTAAGGT+TGG | - | chr1.4:77858898-77858917 | MS.gene061155:intron | 15.0% |
| !! | ATAAAACTAATATTGTAGTA+TGG | + | chr1.4:77859087-77859106 | None:intergenic | 15.0% |
| !! | ATAAAGTAATAATGTATGAA+TGG | + | chr1.4:77859447-77859466 | None:intergenic | 15.0% |
| !! | ATTATAGTATTATACTATTC+AGG | - | chr1.4:77858625-77858644 | MS.gene061155:intron | 15.0% |
| !! | TAAATCAAAGATAATTAATG+TGG | + | chr1.4:77858487-77858506 | None:intergenic | 15.0% |
| !! | TAATTATTATATGGATATGA+TGG | - | chr1.4:77855119-77855138 | MS.gene061155:intron | 15.0% |
| !! | TATAGATTAAAAACGAAATT+TGG | + | chr1.4:77855549-77855568 | None:intergenic | 15.0% |
| !!! | AAACTTCAATTTTATTTTCT+TGG | - | chr1.4:77856769-77856788 | MS.gene061155:intron | 15.0% |
| !!! | AAAGATCATTTTAAATTTGA+TGG | + | chr1.4:77855626-77855645 | None:intergenic | 15.0% |
| !!! | AACTTCAATTTTATTTTCTT+GGG | - | chr1.4:77856770-77856789 | MS.gene061155:intron | 15.0% |
| !!! | AAGATCATTTTAAATTTGAT+GGG | + | chr1.4:77855625-77855644 | None:intergenic | 15.0% |
| !!! | AGTTGATGTTTAATAATATT+TGG | + | chr1.4:77858310-77858329 | None:intergenic | 15.0% |
| !!! | CTAAACATTTTTAAAGATAA+TGG | - | chr1.4:77855796-77855815 | MS.gene061155:intron | 15.0% |
| !!! | TTTAATTTTAAGTTTCAAAC+AGG | - | chr1.4:77855457-77855476 | MS.gene061155:intron | 15.0% |
| !!! | TTTATTGTTGTTATACATTA+TGG | + | chr1.4:77859375-77859394 | None:intergenic | 15.0% |
| !! | AAAAACTACTATTGAACAAA+AGG | + | chr1.4:77854866-77854885 | None:intergenic | 20.0% |
| !! | AAAACTACTATTGAACAAAA+GGG | + | chr1.4:77854865-77854884 | None:intergenic | 20.0% |
| !! | ACAAAATTAATGAACAATCA+AGG | - | chr1.4:77856647-77856666 | MS.gene061155:intron | 20.0% |
| !! | ACATGATATTTATTACTGTT+TGG | - | chr1.4:77857547-77857566 | MS.gene061155:intron | 20.0% |
| !! | AGTAATAAATATCATGTAAG+TGG | + | chr1.4:77857544-77857563 | None:intergenic | 20.0% |
| !! | CAAATAAAATAGTTAGACTT+AGG | + | chr1.4:77859124-77859143 | None:intergenic | 20.0% |
| !! | GGAAGCAAATATAATTAAAT+TGG | + | chr1.4:77857778-77857797 | None:intergenic | 20.0% |
| !! | GGCTATGATTAATTATTATA+TGG | - | chr1.4:77855110-77855129 | MS.gene061155:intron | 20.0% |
| !! | TACTATTTATAAATGTGAGA+GGG | - | chr1.4:77859736-77859755 | MS.gene061155:intron | 20.0% |
| !! | TATTAAACATCAACTTTAGT+GGG | - | chr1.4:77858315-77858334 | MS.gene061155:intron | 20.0% |
| !! | TCAGACATAAATAAATCTAA+TGG | + | chr1.4:77856303-77856322 | None:intergenic | 20.0% |
| !! | TGTCAAAAAAATAAAACGTA+TGG | + | chr1.4:77859223-77859242 | None:intergenic | 20.0% |
| !! | TTATTAAACATCAACTTTAG+TGG | - | chr1.4:77858314-77858333 | MS.gene061155:intron | 20.0% |
| !! | TTCGTAATTAGAACTAATAA+TGG | - | chr1.4:77857583-77857602 | MS.gene061155:intron | 20.0% |
| !! | TTTATGTAATATAATTCCAC+AGG | - | chr1.4:77856493-77856512 | MS.gene061155:intron | 20.0% |
| !! | TTTCTTATACTATTAGTGAA+GGG | - | chr1.4:77859180-77859199 | MS.gene061155:intron | 20.0% |
| !!! | ATACATTGATGATTTTGAAT+TGG | - | chr1.4:77859510-77859529 | MS.gene061155:CDS | 20.0% |
| !!! | GAAAAAGCAAACAAATTTTA+TGG | + | chr1.4:77859582-77859601 | None:intergenic | 20.0% |
| !!! | GAAAATTTTAAAAATGGAAG+AGG | - | chr1.4:77856709-77856728 | MS.gene061155:intron | 20.0% |
| !!! | GATGATGAATATATTTGTTA+AGG | + | chr1.4:77857156-77857175 | None:intergenic | 20.0% |
| !!! | GTTCATTAATTTTGTCAAAA+CGG | + | chr1.4:77856642-77856661 | None:intergenic | 20.0% |
| !!! | TACATTGATGATTTTGAATT+GGG | - | chr1.4:77859511-77859530 | MS.gene061155:CDS | 20.0% |
| !!! | TGAATTTTTCAATATTCAGA+GGG | + | chr1.4:77858932-77858951 | None:intergenic | 20.0% |
| !!! | TGTGCTGAAAATTTTAAAAA+TGG | - | chr1.4:77856703-77856722 | MS.gene061155:intron | 20.0% |
| !!! | TGTTGATTTTATAAAACGTA+CGG | + | chr1.4:77859251-77859270 | None:intergenic | 20.0% |
| !!! | TTTTATGTTGCTAAGTTATT+GGG | - | chr1.4:77854891-77854910 | MS.gene061155:intron | 20.0% |
| ! | AAACTAATATTGTAGTATGG+AGG | + | chr1.4:77859084-77859103 | None:intergenic | 25.0% |
| ! | AACTAATATTGTAGTATGGA+GGG | + | chr1.4:77859083-77859102 | None:intergenic | 25.0% |
| ! | AATAAATATCATGTAAGTGG+TGG | + | chr1.4:77857541-77857560 | None:intergenic | 25.0% |
| ! | ACTATTTATAAATGTGAGAG+GGG | - | chr1.4:77859737-77859756 | MS.gene061155:intron | 25.0% |
| ! | AGTAATAATGTATGAATGGT+TGG | + | chr1.4:77859443-77859462 | None:intergenic | 25.0% |
| ! | AGTAATTTATAGCACTTGAT+TGG | - | chr1.4:77859336-77859355 | MS.gene061155:intron | 25.0% |
| ! | ATCTCTCATTATCTTAACTT+TGG | - | chr1.4:77857969-77857988 | MS.gene061155:intron | 25.0% |
| ! | ATTAAGGTTGAAATATGACA+GGG | + | chr1.4:77858037-77858056 | None:intergenic | 25.0% |
| ! | CAACTTTAATAGAAATCAGA+AGG | + | chr1.4:77855888-77855907 | None:intergenic | 25.0% |
| ! | CAATATCATGTACCAAATAT+AGG | + | chr1.4:77858861-77858880 | None:intergenic | 25.0% |
| ! | CAATTACAAATAAACACATC+AGG | + | chr1.4:77855997-77856016 | None:intergenic | 25.0% |
| ! | CATTCATGAATATAACATAG+TGG | - | chr1.4:77857421-77857440 | MS.gene061155:intron | 25.0% |
| ! | CTACTATTTATAAATGTGAG+AGG | - | chr1.4:77859735-77859754 | MS.gene061155:intron | 25.0% |
| ! | CTCTCACATTTATAAATAGT+AGG | + | chr1.4:77859737-77859756 | None:intergenic | 25.0% |
| ! | CTGATGTGTTTATTTGTAAT+TGG | - | chr1.4:77855995-77856014 | MS.gene061155:intron | 25.0% |
| ! | CTTTCTTATACTATTAGTGA+AGG | - | chr1.4:77859179-77859198 | MS.gene061155:intron | 25.0% |
| ! | GTAATAATGTATGAATGGTT+GGG | + | chr1.4:77859442-77859461 | None:intergenic | 25.0% |
| ! | GTGTGAAAGAGTAAATATAA+CGG | - | chr1.4:77856746-77856765 | MS.gene061155:intron | 25.0% |
| ! | TAATAATGTATGAATGGTTG+GGG | + | chr1.4:77859441-77859460 | None:intergenic | 25.0% |
| ! | TAATGAACAATCAAGGTAAT+AGG | - | chr1.4:77856654-77856673 | MS.gene061155:intron | 25.0% |
| ! | TATCTTAATCACCTATCAAT+TGG | - | chr1.4:77858252-77858271 | MS.gene061155:intron | 25.0% |
| ! | TCTCTCATTATCTTAACTTT+GGG | - | chr1.4:77857970-77857989 | MS.gene061155:intron | 25.0% |
| ! | TTAAAAACGTCAACAATGTT+TGG | - | chr1.4:77855523-77855542 | MS.gene061155:intron | 25.0% |
| ! | TTAAAGATCATGAATAAGAC+TGG | + | chr1.4:77855949-77855968 | None:intergenic | 25.0% |
| ! | TTACAAAACATTTCAAGGTA+TGG | - | chr1.4:77857870-77857889 | MS.gene061155:intron | 25.0% |
| ! | TTTAAAAGAGACATTTCAAG+AGG | + | chr1.4:77857515-77857534 | None:intergenic | 25.0% |
| !! | AAATCTGCATATTTCTACTA+TGG | - | chr1.4:77858105-77858124 | MS.gene061155:CDS | 25.0% |
| !! | AATTGATTCAACTGTAAACA+AGG | + | chr1.4:77857678-77857697 | None:intergenic | 25.0% |
| !! | AATTGATTTCCTGTTGAAAT+TGG | - | chr1.4:77855022-77855041 | MS.gene061155:intron | 25.0% |
| !! | ACAGAATGTTTCTATGATTA+TGG | + | chr1.4:77858428-77858447 | None:intergenic | 25.0% |
| !! | ACTTGTCCTAAAGAATTTTT+CGG | - | chr1.4:77858772-77858791 | MS.gene061155:intron | 25.0% |
| !! | CTTTTATGTTGCTAAGTTAT+TGG | - | chr1.4:77854890-77854909 | MS.gene061155:intron | 25.0% |
| !! | GTCTTATTCATGATCTTTAA+TGG | - | chr1.4:77855949-77855968 | MS.gene061155:intron | 25.0% |
| !! | GTTTTACATCAAAGATTCAT+GGG | + | chr1.4:77857051-77857070 | None:intergenic | 25.0% |
| !! | TAGGTGTTTTATCCTATATT+TGG | - | chr1.4:77858846-77858865 | MS.gene061155:intron | 25.0% |
| !! | TGTTTTACATCAAAGATTCA+TGG | + | chr1.4:77857052-77857071 | None:intergenic | 25.0% |
| !!! | AATTTTTCAATATTCAGAGG+GGG | + | chr1.4:77858930-77858949 | None:intergenic | 25.0% |
| !!! | ATATGTACTTTTTAGTTTGC+TGG | - | chr1.4:77856852-77856871 | MS.gene061155:intron | 25.0% |
| !!! | CAGACGTTTTTTTTTTATCA+AGG | - | chr1.4:77858950-77858969 | MS.gene061155:intron | 25.0% |
| !!! | CAGGAAATCAATTTTAGTTT+TGG | + | chr1.4:77855015-77855034 | None:intergenic | 25.0% |
| !!! | CTGAATTTTTCAATATTCAG+AGG | + | chr1.4:77858933-77858952 | None:intergenic | 25.0% |
| !!! | CTTTTAAGCTTTAACATCAT+CGG | - | chr1.4:77859006-77859025 | MS.gene061155:intron | 25.0% |
| !!! | GAATTTTTCAATATTCAGAG+GGG | + | chr1.4:77858931-77858950 | None:intergenic | 25.0% |
| !!! | GTATTTTTCAGACAATAATG+TGG | - | chr1.4:77859947-77859966 | MS.gene061155:CDS | 25.0% |
| !!! | TATGTACTTTTTAGTTTGCT+GGG | - | chr1.4:77856853-77856872 | MS.gene061155:intron | 25.0% |
| !!! | TCTTGGTTGCTTAATTTTTT+TGG | - | chr1.4:77858731-77858750 | MS.gene061155:intron | 25.0% |
| AAAACTAGTCACCAATTGAT+AGG | + | chr1.4:77858266-77858285 | None:intergenic | 30.0% | |
| AAGACCAGAGGAATTAAATT+CGG | + | chr1.4:77855348-77855367 | None:intergenic | 30.0% | |
| AATCCACCGAAAAATTCTTT+AGG | + | chr1.4:77858781-77858800 | None:intergenic | 30.0% | |
| ACTTTCTCCTATCTAAATGT+AGG | - | chr1.4:77859866-77859885 | MS.gene061155:intron | 30.0% | |
| AGGGTAAGAAAGAGTAATAA+AGG | + | chr1.4:77854813-77854832 | None:intergenic | 30.0% | |
| ATCAGCAAAAATAGATGTCA+TGG | - | chr1.4:77855280-77855299 | MS.gene061155:intron | 30.0% | |
| ATGTTTCACAAATACCTAAG+TGG | + | chr1.4:77856096-77856115 | None:intergenic | 30.0% | |
| CACAAATTTGCATATTCTGA+AGG | - | chr1.4:77856613-77856632 | MS.gene061155:intron | 30.0% | |
| CGATGATGTTAAAGCTTAAA+AGG | + | chr1.4:77859008-77859027 | None:intergenic | 30.0% | |
| CTGTCATAACTTATATAGCT+GGG | - | chr1.4:77856454-77856473 | MS.gene061155:intron | 30.0% | |
| CTTTCTCCTATCTAAATGTA+GGG | - | chr1.4:77859867-77859886 | MS.gene061155:intron | 30.0% | |
| GATTAAGGTTGAAATATGAC+AGG | + | chr1.4:77858038-77858057 | None:intergenic | 30.0% | |
| GATTATGGCTGTTAGAAATA+AGG | - | chr1.4:77855214-77855233 | MS.gene061155:intron | 30.0% | |
| GGGTCATGTCAAATAAATAT+CGG | - | chr1.4:77859757-77859776 | MS.gene061155:intron | 30.0% | |
| GTTATACATTATGGATGAGT+TGG | + | chr1.4:77859366-77859385 | None:intergenic | 30.0% | |
| TATGATTATGGTTGCCAAAA+GGG | + | chr1.4:77858416-77858435 | None:intergenic | 30.0% | |
| TATTTAGGCAAAACTGCATA+GGG | - | chr1.4:77855423-77855442 | MS.gene061155:intron | 30.0% | |
| TCAAGTCATAGTAGTTTCTA+GGG | - | chr1.4:77856269-77856288 | MS.gene061155:intron | 30.0% | |
| TCTGTCATAACTTATATAGC+TGG | - | chr1.4:77856453-77856472 | MS.gene061155:intron | 30.0% | |
| TCTTACATCAAGATGTTCAA+TGG | + | chr1.4:77855371-77855390 | None:intergenic | 30.0% | |
| TGCTTACTTCTACTATATAG+TGG | - | chr1.4:77857895-77857914 | MS.gene061155:intron | 30.0% | |
| TGTATACAGTTACAGCAAAT+GGG | - | chr1.4:77857799-77857818 | MS.gene061155:intron | 30.0% | |
| TTATTTAGGCAAAACTGCAT+AGG | - | chr1.4:77855422-77855441 | MS.gene061155:intron | 30.0% | |
| TTCATCATGGATACATAGTT+AGG | - | chr1.4:77854936-77854955 | MS.gene061155:intron | 30.0% | |
| TTGTATACAGTTACAGCAAA+TGG | - | chr1.4:77857798-77857817 | MS.gene061155:intron | 30.0% | |
| TTTCAGCATGAATTTGATCA+AGG | - | chr1.4:77860022-77860041 | MS.gene061155:CDS | 30.0% | |
| TTTCTCCTATCTAAATGTAG+GGG | - | chr1.4:77859868-77859887 | MS.gene061155:intron | 30.0% | |
| ! | GTTAGACTTAGGAGTATATT+AGG | + | chr1.4:77859113-77859132 | None:intergenic | 30.0% |
| ! | TCTCTTGACAAATCTTTTGT+TGG | - | chr1.4:77856522-77856541 | MS.gene061155:intron | 30.0% |
| ! | TGACAAAGTATCTAACTTCT+GGG | + | chr1.4:77859403-77859422 | None:intergenic | 30.0% |
| ! | TGATGTTTGATTTATGCAAC+AGG | - | chr1.4:77859645-77859664 | MS.gene061155:intron | 30.0% |
| ! | TGATTTGGCTAAGAAACTTT+GGG | - | chr1.4:77859998-77860017 | MS.gene061155:CDS | 30.0% |
| ! | TTACTTGTTACATCTTGATC+AGG | - | chr1.4:77858512-77858531 | MS.gene061155:intron | 30.0% |
| ! | TTGACAAAGTATCTAACTTC+TGG | + | chr1.4:77859404-77859423 | None:intergenic | 30.0% |
| !! | ATTGATGATTTTGAATTGGG+TGG | - | chr1.4:77859514-77859533 | MS.gene061155:CDS | 30.0% |
| !! | ATTTGCTGTAACTGTATACA+AGG | + | chr1.4:77857799-77857818 | None:intergenic | 30.0% |
| !! | ATTTTTCAATATTCAGAGGG+GGG | + | chr1.4:77858929-77858948 | None:intergenic | 30.0% |
| !! | CTATTGGTTTGATTCTGAAA+AGG | - | chr1.4:77856805-77856824 | MS.gene061155:intron | 30.0% |
| !! | GATTTTGCTTTTAGATCAGA+AGG | - | chr1.4:77856929-77856948 | MS.gene061155:intron | 30.0% |
| !! | TAATGATTTTGACATACCTG+TGG | + | chr1.4:77859711-77859730 | None:intergenic | 30.0% |
| !!! | ATGACATCTATTTTTGCTGA+TGG | + | chr1.4:77855281-77855300 | None:intergenic | 30.0% |
| AAAAGCAAAATCGTATCAGC+AGG | + | chr1.4:77856921-77856940 | None:intergenic | 35.0% | |
| AATGTGGCAAAACCATCAAA+AGG | + | chr1.4:77858471-77858490 | None:intergenic | 35.0% | |
| ACAGGTATAGTAAATGTGGT+TGG | - | chr1.4:77859663-77859682 | MS.gene061155:intron | 35.0% | |
| ACTGTTATGACGGTAAAGAT+TGG | + | chr1.4:77858589-77858608 | None:intergenic | 35.0% | |
| AGAAAGATAGTGCCACATAA+CGG | + | chr1.4:77858714-77858733 | None:intergenic | 35.0% | |
| AGATAGCAGATGCTGTAAAA+AGG | + | chr1.4:77858237-77858256 | None:intergenic | 35.0% | |
| AGTCAAGCTACTTGAAAATG+TGG | + | chr1.4:77857459-77857478 | None:intergenic | 35.0% | |
| AGTGATATACATCTTGAGCT+CGG | + | chr1.4:77857205-77857224 | None:intergenic | 35.0% | |
| ATAAAAGGCAAAACTGCATC+AGG | + | chr1.4:77855850-77855869 | None:intergenic | 35.0% | |
| ATCTTTCCGTGAAAATTGTG+AGG | - | chr1.4:77856222-77856241 | MS.gene061155:intron | 35.0% | |
| ATGTGGCAAAACCATCAAAA+GGG | + | chr1.4:77858470-77858489 | None:intergenic | 35.0% | |
| ATTGCAAATTCTCTTCATCC+AGG | - | chr1.4:77858552-77858571 | MS.gene061155:intron | 35.0% | |
| ATTTCTTGCAACTCTTGAGT+GGG | + | chr1.4:77857238-77857257 | None:intergenic | 35.0% | |
| CACAAAAGACTAACTTTCAG+TGG | + | chr1.4:77855502-77855521 | None:intergenic | 35.0% | |
| CATGATGAAAAGCTAGTACA+AGG | + | chr1.4:77854925-77854944 | None:intergenic | 35.0% | |
| CCAGCTTACAAAACATTTCA+AGG | - | chr1.4:77857865-77857884 | MS.gene061155:intron | 35.0% | |
| CTACATCAAATTCATGCAAC+TGG | - | chr1.4:77855089-77855108 | MS.gene061155:intron | 35.0% | |
| CTATGATTATGGTTGCCAAA+AGG | + | chr1.4:77858417-77858436 | None:intergenic | 35.0% | |
| CTTGATGTAAGAAGAGAAAG+TGG | - | chr1.4:77855379-77855398 | MS.gene061155:intron | 35.0% | |
| GCTAAAGTGACTAATACTGA+AGG | - | chr1.4:77859305-77859324 | MS.gene061155:intron | 35.0% | |
| GGATATGATGGTATGTTAAC+AGG | - | chr1.4:77855131-77855150 | MS.gene061155:intron | 35.0% | |
| GTAATTGGAAGAAACAATGC+AGG | - | chr1.4:77856010-77856029 | MS.gene061155:intron | 35.0% | |
| GTATACAGTTACAGCAAATG+GGG | - | chr1.4:77857800-77857819 | MS.gene061155:intron | 35.0% | |
| GTCAAGCTACTTGAAAATGT+GGG | + | chr1.4:77857458-77857477 | None:intergenic | 35.0% | |
| GTCAAGTCATAGTAGTTTCT+AGG | - | chr1.4:77856268-77856287 | MS.gene061155:intron | 35.0% | |
| GTTGCATGAAGAATTAAGAG+TGG | - | chr1.4:77857709-77857728 | MS.gene061155:intron | 35.0% | |
| TAAAAGGCAAAACTGCATCA+GGG | + | chr1.4:77855849-77855868 | None:intergenic | 35.0% | |
| TATGAATTATGCAAGTCCTC+TGG | - | chr1.4:77858653-77858672 | MS.gene061155:CDS | 35.0% | |
| TCTTTCCGTGAAAATTGTGA+GGG | - | chr1.4:77856223-77856242 | MS.gene061155:intron | 35.0% | |
| TGCAACAGGTATAGTAAATG+TGG | - | chr1.4:77859659-77859678 | MS.gene061155:intron | 35.0% | |
| TGGGCAATCAATGTTACTAT+TGG | - | chr1.4:77856789-77856808 | MS.gene061155:intron | 35.0% | |
| TTACATCTTGATCAGGATGA+TGG | - | chr1.4:77858519-77858538 | MS.gene061155:intron | 35.0% | |
| TTATGTGGCACTATCTTTCT+TGG | - | chr1.4:77858714-77858733 | MS.gene061155:intron | 35.0% | |
| TTCTAACAGCCATAATCACA+TGG | + | chr1.4:77855211-77855230 | None:intergenic | 35.0% | |
| TTCTCCTATCTAAATGTAGG+GGG | - | chr1.4:77859869-77859888 | MS.gene061155:intron | 35.0% | |
| TTGCATGAATTTGATGTAGC+AGG | + | chr1.4:77855088-77855107 | None:intergenic | 35.0% | |
| TTTCTGTAGTATTTGTCGAC+TGG | - | chr1.4:77857740-77857759 | MS.gene061155:intron | 35.0% | |
| ! | AAAGCTTAAAAGGTTGATCG+CGG | + | chr1.4:77858998-77859017 | None:intergenic | 35.0% |
| ! | CCTTGAAATGTTTTGTAAGC+TGG | + | chr1.4:77857868-77857887 | None:intergenic | 35.0% |
| ! | CTCTTTAAGTATTGCTTCTC+TGG | + | chr1.4:77855255-77855274 | None:intergenic | 35.0% |
| ! | GAAATGTTTTGTAAGCTGGT+TGG | + | chr1.4:77857864-77857883 | None:intergenic | 35.0% |
| ! | TGTCATTGGAAAGCATGAAA+GGG | + | chr1.4:77856048-77856067 | None:intergenic | 35.0% |
| ! | TTGTCATTGGAAAGCATGAA+AGG | + | chr1.4:77856049-77856068 | None:intergenic | 35.0% |
| ! | TTTGAATTGGGTGGTTTTTC+TGG | - | chr1.4:77859523-77859542 | MS.gene061155:CDS | 35.0% |
| !! | AACTTGTTGCATCGAGATTA+AGG | + | chr1.4:77858053-77858072 | None:intergenic | 35.0% |
| !! | CTGATTTGGCTAAGAAACTT+TGG | - | chr1.4:77859997-77860016 | MS.gene061155:CDS | 35.0% |
| !! | TGTCCTAAAGAATTTTTCGG+TGG | - | chr1.4:77858775-77858794 | MS.gene061155:intron | 35.0% |
| !! | TTTAGAGTGTTGAACCAAGT+TGG | + | chr1.4:77855781-77855800 | None:intergenic | 35.0% |
| !!! | CTTGTACTAGCTTTTCATCA+TGG | - | chr1.4:77854923-77854942 | MS.gene061155:intron | 35.0% |
| AAAAGGCAAAACTGCATCAG+GGG | + | chr1.4:77855848-77855867 | None:intergenic | 40.0% | |
| AACACCTAGAGCAATGTAGA+TGG | + | chr1.4:77858834-77858853 | None:intergenic | 40.0% | |
| AACCTTGATCATGTGAAGAG+TGG | + | chr1.4:77857346-77857365 | None:intergenic | 40.0% | |
| AACTAAAGCCTGTTCCAACT+AGG | + | chr1.4:77858369-77858388 | None:intergenic | 40.0% | |
| AAGAAACAATGCAGGAGTCA+TGG | - | chr1.4:77856018-77856037 | MS.gene061155:intron | 40.0% | |
| ACACAGAGATTCGTGTGAAT+TGG | - | chr1.4:77857103-77857122 | MS.gene061155:intron | 40.0% | |
| ACAGCTGAAGAAGTTACTCA+TGG | - | chr1.4:77854743-77854762 | MS.gene061155:CDS | 40.0% | |
| ACATGGTGTCCATGTGATTA+TGG | - | chr1.4:77855199-77855218 | MS.gene061155:intron | 40.0% | |
| ACTAAAGCCTGTTCCAACTA+GGG | + | chr1.4:77858368-77858387 | None:intergenic | 40.0% | |
| ACTCATGGAATTGATGCAAC+TGG | - | chr1.4:77854758-77854777 | MS.gene061155:CDS | 40.0% | |
| ACTCTTCACATGATCAAGGT+TGG | - | chr1.4:77857345-77857364 | MS.gene061155:intron | 40.0% | |
| AGTGAACTAAGACTCCAACT+TGG | - | chr1.4:77855764-77855783 | MS.gene061155:intron | 40.0% | |
| ATCAAAGATTCATGGGTGTG+TGG | + | chr1.4:77857044-77857063 | None:intergenic | 40.0% | |
| ATCCACTCTTCACATGATCA+AGG | - | chr1.4:77857341-77857360 | MS.gene061155:intron | 40.0% | |
| CAAAAGGGATGCAAAGTTTG+CGG | + | chr1.4:77858401-77858420 | None:intergenic | 40.0% | |
| CAAATCAAGTTCACATGGGA+GGG | - | chr1.4:77859971-77859990 | MS.gene061155:CDS | 40.0% | |
| CACTAATTCCCTTCACTTGT+GGG | + | chr1.4:77859923-77859942 | None:intergenic | 40.0% | |
| CATTTCTTGCAACTCTTGAG+TGG | + | chr1.4:77857239-77857258 | None:intergenic | 40.0% | |
| CGTCATAACAGTGCAATCAA+CGG | - | chr1.4:77858597-77858616 | MS.gene061155:intron | 40.0% | |
| CTCTTCACATGATCAAGGTT+GGG | - | chr1.4:77857346-77857365 | MS.gene061155:intron | 40.0% | |
| CTGACTATGCCAATTTCAAC+AGG | + | chr1.4:77855034-77855053 | None:intergenic | 40.0% | |
| CTGTAGTTCGATGTTGTCAT+TGG | + | chr1.4:77856062-77856081 | None:intergenic | 40.0% | |
| CTGTTGAAATTGGCATAGTC+AGG | - | chr1.4:77855032-77855051 | MS.gene061155:intron | 40.0% | |
| GACTGGAACATAGACATTCA+TGG | + | chr1.4:77855932-77855951 | None:intergenic | 40.0% | |
| GCATCCGAATTTAATTCCTC+TGG | - | chr1.4:77855341-77855360 | MS.gene061155:intron | 40.0% | |
| GCTAGTGAAAGTAAGACTGA+AGG | - | chr1.4:77856562-77856581 | MS.gene061155:intron | 40.0% | |
| GGAGTTAGATCTCAGTTCAT+TGG | - | chr1.4:77855301-77855320 | MS.gene061155:intron | 40.0% | |
| GTTATGACGGTAAAGATTGG+TGG | + | chr1.4:77858586-77858605 | None:intergenic | 40.0% | |
| TCAGACGCAGTTAGAATTGT+TGG | - | chr1.4:77856990-77857009 | MS.gene061155:intron | 40.0% | |
| TCTGCAATGTGAACTGTGAA+TGG | - | chr1.4:77858141-77858160 | MS.gene061155:CDS | 40.0% | |
| TCTTCACATGATCAAGGTTG+GGG | - | chr1.4:77857347-77857366 | MS.gene061155:intron | 40.0% | |
| TGCAAATTTGTGAGCTTCTG+AGG | + | chr1.4:77856605-77856624 | None:intergenic | 40.0% | |
| TGGATACATAGTTAGGCTTG+AGG | - | chr1.4:77854943-77854962 | MS.gene061155:intron | 40.0% | |
| TGGCCAAATCAAGTTCACAT+GGG | - | chr1.4:77859967-77859986 | MS.gene061155:CDS | 40.0% | |
| TGTAAGAAGAGAAAGTGGCA+TGG | - | chr1.4:77855384-77855403 | MS.gene061155:intron | 40.0% | |
| TGTCAAGAGAAAATGACCTG+TGG | + | chr1.4:77856512-77856531 | None:intergenic | 40.0% | |
| TGTGATGAAAAACGTTCCAC+AGG | - | chr1.4:77859692-77859711 | MS.gene061155:intron | 40.0% | |
| TGTTGTCAATGAGGGTCTAA+TGG | - | chr1.4:77855673-77855692 | MS.gene061155:intron | 40.0% | |
| TTAGACCCTCATTGACAACA+AGG | + | chr1.4:77855673-77855692 | None:intergenic | 40.0% | |
| ! | CGTTGATTGCACTGTTATGA+CGG | + | chr1.4:77858599-77858618 | None:intergenic | 40.0% |
| ! | TAGTAGTTTCTAGGGAGTGA+AGG | - | chr1.4:77856277-77856296 | MS.gene061155:intron | 40.0% |
| ! | TATTTGTTAAGGTGCTTCCG+TGG | + | chr1.4:77857145-77857164 | None:intergenic | 40.0% |
| ! | TCAGTATCTCTCCCTTTTGA+TGG | - | chr1.4:77858456-77858475 | MS.gene061155:intron | 40.0% |
| ! | TTGGAACAGGCTTTAGTTGT+TGG | - | chr1.4:77858371-77858390 | MS.gene061155:intron | 40.0% |
| !! | ACATTCCTCTCTCTAAGACA+TGG | - | chr1.4:77857308-77857327 | MS.gene061155:intron | 40.0% |
| !! | TGGTTTGTTTGTTTGCACAC+TGG | - | chr1.4:77859543-77859562 | MS.gene061155:CDS | 40.0% |
| !! | TGTAGCCTTGTTGTCAATGA+GGG | - | chr1.4:77855665-77855684 | MS.gene061155:intron | 40.0% |
| !! | TTGTAGCCTTGTTGTCAATG+AGG | - | chr1.4:77855664-77855683 | MS.gene061155:intron | 40.0% |
| !!! | TTTTAGTTTGCTGGGAGTCT+TGG | - | chr1.4:77856861-77856880 | MS.gene061155:CDS | 40.0% |
| AACCGTATTGCGTGTGTGTT+TGG | + | chr1.4:77856381-77856400 | None:intergenic | 45.0% | |
| ACGCGTGTTCTTGCTTTACA+TGG | - | chr1.4:77855182-77855201 | MS.gene061155:intron | 45.0% | |
| AGTCTCAACTCCAATACCAC+TGG | + | chr1.4:77855162-77855181 | None:intergenic | 45.0% | |
| ATTATGCAAGTCCTCTGGTG+TGG | - | chr1.4:77858658-77858677 | MS.gene061155:CDS | 45.0% | |
| CAGTTTGCGACAAACCACTT+AGG | - | chr1.4:77856079-77856098 | MS.gene061155:intron | 45.0% | |
| CCAAATCAAGTTCACATGGG+AGG | - | chr1.4:77859970-77859989 | MS.gene061155:CDS | 45.0% | |
| CCACAAGTGAAGGGAATTAG+TGG | - | chr1.4:77859921-77859940 | MS.gene061155:intron | 45.0% | |
| CCACTAATTCCCTTCACTTG+TGG | + | chr1.4:77859924-77859943 | None:intergenic | 45.0% | |
| CCTCCCATGTGAACTTGATT+TGG | + | chr1.4:77859973-77859992 | None:intergenic | 45.0% | |
| CTAAAGCCTGTTCCAACTAG+GGG | + | chr1.4:77858367-77858386 | None:intergenic | 45.0% | |
| CTGTATCATCTGCCGTTATG+TGG | - | chr1.4:77858699-77858718 | MS.gene061155:CDS | 45.0% | |
| GAATGGTTGGGGAAGAATAG+TGG | + | chr1.4:77859430-77859449 | None:intergenic | 45.0% | |
| GATGTTCAATGGAAGACCAG+AGG | + | chr1.4:77855360-77855379 | None:intergenic | 45.0% | |
| GCAAATTCTCTTCATCCAGG+AGG | - | chr1.4:77858555-77858574 | MS.gene061155:intron | 45.0% | |
| GTGGCCAAATCAAGTTCACA+TGG | - | chr1.4:77859966-77859985 | MS.gene061155:CDS | 45.0% | |
| TAAAGCCTGTTCCAACTAGG+GGG | + | chr1.4:77858366-77858385 | None:intergenic | 45.0% | |
| TACAGCAAATGGGGTGCATA+TGG | - | chr1.4:77857809-77857828 | MS.gene061155:intron | 45.0% | |
| TACCAGTGACAATAGCAGTG+AGG | + | chr1.4:77854784-77854803 | None:intergenic | 45.0% | |
| TCAGGAAACAACACTGCTAC+TGG | + | chr1.4:77855979-77855998 | None:intergenic | 45.0% | |
| TCATCCCGTCCTGTAACTAA+GGG | + | chr1.4:77857395-77857414 | None:intergenic | 45.0% | |
| TCCGTGAAAATTGTGAGGGT+GGG | - | chr1.4:77856227-77856246 | MS.gene061155:intron | 45.0% | |
| TCGTCCATCTACATTGCTCT+AGG | - | chr1.4:77858827-77858846 | MS.gene061155:intron | 45.0% | |
| TCTCAGACTCTCAGTGATCA+CGG | + | chr1.4:77859043-77859062 | None:intergenic | 45.0% | |
| TTCCGTGAAAATTGTGAGGG+TGG | - | chr1.4:77856226-77856245 | MS.gene061155:intron | 45.0% | |
| ! | CATTTAGAATGCCACACCAG+AGG | + | chr1.4:77858672-77858691 | None:intergenic | 45.0% |
| ! | CGCAAACTTTGCATCCCTTT+TGG | - | chr1.4:77858399-77858418 | MS.gene061155:intron | 45.0% |
| ! | GGGATGCTTCAACTTTTGAC+AGG | - | chr1.4:77857367-77857386 | MS.gene061155:intron | 45.0% |
| !! | ATGTTAACAGGAGCATCCAG+TGG | - | chr1.4:77855143-77855162 | MS.gene061155:intron | 45.0% |
| !! | TCCTCTCTCTAAGACATGGT+TGG | - | chr1.4:77857312-77857331 | MS.gene061155:intron | 45.0% |
| !!! | AAGGGGTATCTGGGTTTTCA+TGG | - | chr1.4:77854714-77854733 | MS.gene061155:CDS | 45.0% |
| ACTGCGTCTGAGTTGTGCAT+AGG | + | chr1.4:77856981-77857000 | None:intergenic | 50.0% | |
| AGCATTGCACCCACAAGTGA+AGG | - | chr1.4:77859911-77859930 | MS.gene061155:intron | 50.0% | |
| AGGTCCCCTTAGTTACAGGA+CGG | - | chr1.4:77857387-77857406 | MS.gene061155:intron | 50.0% | |
| ATGTGGCCATTCAGCAGGAA+AGG | - | chr1.4:77854695-77854714 | MS.gene061155:CDS | 50.0% | |
| ATTGTGAGGGTGGGGAACTT+TGG | - | chr1.4:77856236-77856255 | MS.gene061155:intron | 50.0% | |
| CATCCCGTCCTGTAACTAAG+GGG | + | chr1.4:77857394-77857413 | None:intergenic | 50.0% | |
| CCGTGAAAATTGTGAGGGTG+GGG | - | chr1.4:77856228-77856247 | MS.gene061155:intron | 50.0% | |
| CGCCAAACACACACGCAATA+CGG | - | chr1.4:77856376-77856395 | MS.gene061155:intron | 50.0% | |
| CGTATTGCGTGTGTGTTTGG+CGG | + | chr1.4:77856378-77856397 | None:intergenic | 50.0% | |
| CTCATCCCGTCCTGTAACTA+AGG | + | chr1.4:77857396-77857415 | None:intergenic | 50.0% | |
| GATACCCCTTTCCTGCTGAA+TGG | + | chr1.4:77854704-77854723 | None:intergenic | 50.0% | |
| GCATTGCACCCACAAGTGAA+GGG | - | chr1.4:77859912-77859931 | MS.gene061155:intron | 50.0% | |
| GCCAACCATGTCTTAGAGAG+AGG | + | chr1.4:77857316-77857335 | None:intergenic | 50.0% | |
| GCTGCCCCCTACATTTAGAT+AGG | + | chr1.4:77859876-77859895 | None:intergenic | 50.0% | |
| GTATTGCGTGTGTGTTTGGC+GGG | + | chr1.4:77856377-77856396 | None:intergenic | 50.0% | |
| TATTGCGTGTGTGTTTGGCG+GGG | + | chr1.4:77856376-77856395 | None:intergenic | 50.0% | |
| TGACAGGTCCCCTTAGTTAC+AGG | - | chr1.4:77857383-77857402 | MS.gene061155:intron | 50.0% | |
| TGGGTGCAATGCTACATAGC+AGG | + | chr1.4:77859904-77859923 | None:intergenic | 50.0% | |
| TGTGGCCATTCAGCAGGAAA+GGG | - | chr1.4:77854696-77854715 | MS.gene061155:CDS | 50.0% | |
| ! | ACATGGGAGGGATGCTGATT+TGG | - | chr1.4:77859983-77860002 | MS.gene061155:CDS | 50.0% |
| ! | CCCCACCCTCACAATTTTCA+CGG | + | chr1.4:77856231-77856250 | None:intergenic | 50.0% |
| ! | TAAGGTGCTTCCGTGGATGT+AGG | + | chr1.4:77857138-77857157 | None:intergenic | 50.0% |
| !! | ACAGGAGCATCCAGTGGTAT+TGG | - | chr1.4:77855149-77855168 | MS.gene061155:intron | 50.0% |
| !! | GGTCTAATGGTGTTGCTGAG+TGG | - | chr1.4:77855686-77855705 | MS.gene061155:intron | 50.0% |
| !! | TCAGCAGGAAAGGGGTATCT+GGG | - | chr1.4:77854705-77854724 | MS.gene061155:CDS | 50.0% |
| !! | TTCAGCAGGAAAGGGGTATC+TGG | - | chr1.4:77854704-77854723 | MS.gene061155:CDS | 50.0% |
| ACTAGGGGGAGTTGGAATGG+AGG | + | chr1.4:77858352-77858371 | None:intergenic | 55.0% | |
| ATTGCGTGTGTGTTTGGCGG+GGG | + | chr1.4:77856375-77856394 | None:intergenic | 55.0% | |
| CAACTCCCCCTAGTTGGAAC+AGG | - | chr1.4:77858358-77858377 | MS.gene061155:intron | 55.0% | |
| CCAACTAGGGGGAGTTGGAA+TGG | + | chr1.4:77858355-77858374 | None:intergenic | 55.0% | |
| CCATTCCAACTCCCCCTAGT+TGG | - | chr1.4:77858352-77858371 | MS.gene061155:intron | 55.0% | |
| CTAGGGGGAGTTGGAATGGA+GGG | + | chr1.4:77858351-77858370 | None:intergenic | 55.0% | |
| CTGTTCCAACTAGGGGGAGT+TGG | + | chr1.4:77858360-77858379 | None:intergenic | 55.0% | |
| CTTCCGTGGATGTAGGCAAG+AGG | + | chr1.4:77857131-77857150 | None:intergenic | 55.0% | |
| GCACCTCTTGCCTACATCCA+CGG | - | chr1.4:77857125-77857144 | MS.gene061155:intron | 55.0% | |
| GCAGCACACACCATCGAAGT+TGG | - | chr1.4:77857018-77857037 | MS.gene061155:intron | 55.0% | |
| GGCCTCACTGCTATTGTCAC+TGG | - | chr1.4:77854779-77854798 | MS.gene061155:CDS | 55.0% | |
| GGTCCCCTTAGTTACAGGAC+GGG | - | chr1.4:77857388-77857407 | MS.gene061155:intron | 55.0% | |
| GTGGCCATTCAGCAGGAAAG+GGG | - | chr1.4:77854697-77854716 | MS.gene061155:CDS | 55.0% | |
| TAGGGGGAGTTGGAATGGAG+GGG | + | chr1.4:77858350-77858369 | None:intergenic | 55.0% | |
| ! | AGATTGGTGGCAATGCCTCC+TGG | + | chr1.4:77858573-77858592 | None:intergenic | 55.0% |
| AGGGGGAGTTGGAATGGAGG+GGG | + | chr1.4:77858349-77858368 | None:intergenic | 60.0% | |
| GGGTGTGTGGCCAACTTCGA+TGG | + | chr1.4:77857031-77857050 | None:intergenic | 60.0% | |
| TTGCGTGTGTGTTTGGCGGG+GGG | + | chr1.4:77856374-77856393 | None:intergenic | 60.0% | |
| TGCGTGTGTGTTTGGCGGGG+GGG | + | chr1.4:77856373-77856392 | None:intergenic | 65.0% | |
| GTGTGTTTGGCGGGGGGGAG+CGG | + | chr1.4:77856368-77856387 | None:intergenic | 70.0% | |
| TGTGTTTGGCGGGGGGGAGC+GGG | + | chr1.4:77856367-77856386 | None:intergenic | 70.0% | |
| GTGTTTGGCGGGGGGGAGCG+GGG | + | chr1.4:77856366-77856385 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 77854695 | 77860052 | 77854695 | ID=MS.gene061155 |
| chr1.4 | mRNA | 77854695 | 77860052 | 77854695 | ID=MS.gene061155.t1;Parent=MS.gene061155 |
| chr1.4 | exon | 77859947 | 77860052 | 77859947 | ID=MS.gene061155.t1.exon1;Parent=MS.gene061155.t1 |
| chr1.4 | CDS | 77859947 | 77860052 | 77859947 | ID=cds.MS.gene061155.t1;Parent=MS.gene061155.t1 |
| chr1.4 | exon | 77859363 | 77859594 | 77859363 | ID=MS.gene061155.t1.exon2;Parent=MS.gene061155.t1 |
| chr1.4 | CDS | 77859363 | 77859594 | 77859363 | ID=cds.MS.gene061155.t1;Parent=MS.gene061155.t1 |
| chr1.4 | exon | 77858647 | 77858726 | 77858647 | ID=MS.gene061155.t1.exon3;Parent=MS.gene061155.t1 |
| chr1.4 | CDS | 77858647 | 77858726 | 77858647 | ID=cds.MS.gene061155.t1;Parent=MS.gene061155.t1 |
| chr1.4 | exon | 77858079 | 77858232 | 77858079 | ID=MS.gene061155.t1.exon4;Parent=MS.gene061155.t1 |
| chr1.4 | CDS | 77858079 | 77858232 | 77858079 | ID=cds.MS.gene061155.t1;Parent=MS.gene061155.t1 |
| chr1.4 | exon | 77856861 | 77856939 | 77856861 | ID=MS.gene061155.t1.exon5;Parent=MS.gene061155.t1 |
| chr1.4 | CDS | 77856861 | 77856939 | 77856861 | ID=cds.MS.gene061155.t1;Parent=MS.gene061155.t1 |
| chr1.4 | exon | 77856129 | 77856213 | 77856129 | ID=MS.gene061155.t1.exon6;Parent=MS.gene061155.t1 |
| chr1.4 | CDS | 77856129 | 77856213 | 77856129 | ID=cds.MS.gene061155.t1;Parent=MS.gene061155.t1 |
| chr1.4 | exon | 77855034 | 77855080 | 77855034 | ID=MS.gene061155.t1.exon7;Parent=MS.gene061155.t1 |
| chr1.4 | CDS | 77855034 | 77855080 | 77855034 | ID=cds.MS.gene061155.t1;Parent=MS.gene061155.t1 |
| chr1.4 | exon | 77854695 | 77854859 | 77854695 | ID=MS.gene061155.t1.exon8;Parent=MS.gene061155.t1 |
| chr1.4 | CDS | 77854695 | 77854859 | 77854695 | ID=cds.MS.gene061155.t1;Parent=MS.gene061155.t1 |
| Gene Sequence |
| Protein sequence |
