AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34141

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34141.t1 MTR_1g100395 95.833 312 13 0 221 532 4 315 0.0 613
MS.gene34141.t1 MTR_1g100335 90.705 312 29 0 221 532 4 315 0.0 573
MS.gene34141.t1 MTR_1g100315 82.692 312 54 0 221 532 4 315 0.0 531
MS.gene34141.t1 MTR_1g100305 78.846 312 66 0 221 532 4 315 0.0 516
MS.gene34141.t1 MTR_8g098415 70.492 305 90 0 224 528 7 311 9.17e-157 449
MS.gene34141.t1 MTR_1g100335 91.770 243 20 0 221 463 4 246 1.98e-156 446
MS.gene34141.t1 MTR_1g100335 91.770 243 20 0 221 463 4 246 5.05e-156 446
MS.gene34141.t1 MTR_8g098415 70.861 302 88 0 224 525 7 308 6.65e-156 447
MS.gene34141.t1 MTR_6g053550 71.010 307 86 2 227 530 18 324 1.65e-151 436
MS.gene34141.t1 MTR_1g100800 91.304 230 15 2 1 229 1 226 8.02e-138 399
MS.gene34141.t1 MTR_8g098415 69.291 254 78 0 275 528 1 254 8.97e-126 368
MS.gene34141.t1 MTR_1g068970 59.016 305 125 0 225 529 13 317 1.43e-125 370
MS.gene34141.t1 MTR_7g099850 59.477 306 123 1 225 529 13 318 6.50e-125 369
MS.gene34141.t1 MTR_6g053600 69.084 262 78 2 227 485 4 265 5.38e-121 357
MS.gene34141.t1 MTR_8g098415 75.587 213 52 0 224 436 7 219 3.41e-111 330
MS.gene34141.t1 MTR_1g068970 56.452 248 108 0 282 529 3 250 2.60e-96 293
MS.gene34141.t1 MTR_3g077410 46.602 309 161 2 225 529 13 321 1.23e-86 271
MS.gene34141.t1 MTR_4g105310 45.631 309 164 2 225 529 24 332 8.34e-82 259
MS.gene34141.t1 MTR_8g099995 44.373 311 169 3 225 531 13 323 7.29e-81 256
MS.gene34141.t1 MTR_4g105310 47.325 243 124 2 225 463 24 266 1.02e-63 209
MS.gene34141.t1 MTR_8g094540 35.912 181 112 2 53 229 34 214 9.56e-31 120
MS.gene34141.t1 MTR_6g081020 35.938 256 146 7 247 492 62 309 1.56e-28 117
MS.gene34141.t1 MTR_3g096890 35.484 186 110 4 53 229 41 225 8.58e-27 109
MS.gene34141.t1 MTR_3g096890 35.484 186 110 4 53 229 105 289 9.08e-26 108
MS.gene34141.t1 MTR_1g100345 64.384 73 26 0 250 322 4 76 7.70e-25 98.6
MS.gene34141.t1 MTR_2g079710 28.754 313 188 9 248 529 88 396 2.46e-24 105
MS.gene34141.t1 MTR_6g041980 28.413 271 174 6 242 508 62 316 5.13e-23 100
MS.gene34141.t1 MTR_3g091070 28.808 302 167 12 249 529 43 317 6.78e-19 88.2
MS.gene34141.t1 MTR_3g009190 28.758 306 180 10 249 529 65 357 1.10e-17 85.1
MS.gene34141.t1 MTR_3g009190 28.758 306 180 10 249 529 83 375 1.29e-17 85.1
MS.gene34141.t1 MTR_6g453040 28.431 306 181 10 249 529 43 335 1.77e-17 84.3
MS.gene34141.t1 MTR_6g041980 27.835 194 133 2 242 435 62 248 8.82e-17 80.9
MS.gene34141.t1 MTR_3g009190 28.525 305 180 10 250 529 65 356 2.46e-15 78.2
MS.gene34141.t1 MTR_8g022500 31.217 189 86 6 190 363 359 518 5.63e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34141.t1 AT4G23420 68.690 313 97 1 221 532 4 316 3.68e-156 448
MS.gene34141.t1 AT4G23420 68.690 313 97 1 221 532 4 316 3.68e-156 448
MS.gene34141.t1 AT4G11410 69.551 312 95 0 221 532 4 315 5.65e-156 447
MS.gene34141.t1 AT4G23430 67.412 313 101 1 221 532 4 316 3.74e-155 446
MS.gene34141.t1 AT4G23420 69.967 303 90 1 227 528 27 329 3.27e-154 444
MS.gene34141.t1 AT4G23430 67.093 313 100 2 221 532 4 314 3.72e-152 438
MS.gene34141.t1 AT4G23430 64.537 313 100 2 221 532 4 306 2.75e-145 420
MS.gene34141.t1 AT4G23430 64.217 313 99 3 221 532 4 304 5.07e-142 412
MS.gene34141.t1 AT4G23420 69.498 259 78 1 221 478 4 262 1.44e-127 373
MS.gene34141.t1 AT4G23420 74.786 234 59 0 221 454 4 237 5.04e-126 369
MS.gene34141.t1 AT2G37540 56.352 307 134 0 223 529 10 316 2.38e-122 362
MS.gene34141.t1 AT4G11410 71.488 242 69 0 221 462 4 245 2.61e-119 352
MS.gene34141.t1 AT5G02540 58.632 307 127 0 223 529 10 316 2.94e-119 355
MS.gene34141.t1 AT2G37540 59.072 237 97 0 223 459 10 246 3.42e-97 295
MS.gene34141.t1 AT4G24050 44.839 310 168 2 225 531 13 322 3.67e-83 262
MS.gene34141.t1 AT5G50130 46.945 311 161 3 225 531 13 323 3.04e-82 259
MS.gene34141.t1 AT5G50130 46.454 282 150 1 251 531 8 289 1.49e-75 241
MS.gene34141.t1 AT5G50130 46.643 283 149 2 251 531 8 290 4.44e-75 240
MS.gene34141.t1 AT1G64590 45.763 295 157 2 234 525 22 316 3.51e-73 236
MS.gene34141.t1 AT5G50130 45.196 281 149 4 225 500 13 293 5.80e-68 222
MS.gene34141.t1 AT5G50130 46.617 266 137 4 225 485 13 278 2.30e-67 221
MS.gene34141.t1 AT4G24050 44.697 264 141 3 225 485 13 274 3.30e-67 218
MS.gene34141.t1 AT5G50130 48.571 245 123 2 225 466 13 257 1.08e-66 216
MS.gene34141.t1 AT5G50130 48.780 246 122 3 225 466 13 258 3.13e-66 215
MS.gene34141.t1 AT5G52420 46.522 230 112 3 1 228 1 221 5.99e-66 214
MS.gene34141.t1 AT5G50130 44.664 253 137 3 251 500 8 260 4.95e-61 203
MS.gene34141.t1 AT5G50130 44.882 254 136 4 251 500 8 261 1.59e-60 201
MS.gene34141.t1 AT5G23920 39.645 169 98 3 52 218 31 197 3.16e-34 129
MS.gene34141.t1 AT1G27990 38.506 174 102 3 53 221 47 220 6.77e-30 118
MS.gene34141.t1 AT4G27760 30.392 306 178 8 247 529 58 351 7.86e-29 118
MS.gene34141.t1 AT5G54190 28.296 311 188 9 250 529 96 402 1.58e-27 115
MS.gene34141.t1 AT1G03630 32.692 312 176 11 248 529 91 398 1.74e-27 114
MS.gene34141.t1 AT1G03630 32.692 312 176 11 248 529 89 396 1.74e-27 114
MS.gene34141.t1 AT5G53090 31.894 301 180 6 247 529 57 350 1.78e-26 111
MS.gene34141.t1 AT4G09750 29.252 294 186 7 219 508 18 293 4.81e-25 106
MS.gene34141.t1 AT4G27440 28.455 369 218 13 196 529 41 398 1.97e-24 105
MS.gene34141.t1 AT4G27440 28.455 369 218 13 196 529 41 398 1.97e-24 105
MS.gene34141.t1 AT5G53100 30.164 305 183 9 247 529 45 341 1.08e-23 103
MS.gene34141.t1 AT5G04070 28.852 305 183 8 249 531 61 353 5.01e-21 95.1
MS.gene34141.t1 AT5G54190 25.965 285 177 8 275 529 1 281 1.35e-20 92.4
MS.gene34141.t1 AT5G15940 26.023 342 229 9 208 531 22 357 4.29e-20 92.4
MS.gene34141.t1 AT5G15940 26.023 342 229 9 208 531 22 357 4.29e-20 92.4
MS.gene34141.t1 AT5G15940 27.575 301 194 9 249 531 62 356 4.74e-20 92.4
MS.gene34141.t1 AT5G15940 26.136 264 178 5 208 458 22 281 2.11e-15 77.8
MS.gene34141.t1 AT3G59710 29.123 285 146 11 248 500 49 309 1.04e-12 69.7
MS.gene34141.t1 AT3G59710 29.123 285 146 11 248 500 20 280 1.12e-12 69.3
MS.gene34141.t1 AT3G59710 29.123 285 146 11 248 500 30 290 1.13e-12 69.3
MS.gene34141.t1 AT5G61830 25.170 294 158 10 249 502 39 310 1.22e-11 66.2
MS.gene34141.t1 AT5G61830 25.170 294 158 10 249 502 39 310 1.22e-11 66.2

Find 96 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATGAAAACATAAAGTTTA+AGG 0.166391 1.2:+75106376 None:intergenic
AGCATAGTGGTTCTTATAAA+AGG 0.221115 1.2:-75106104 MS.gene34141:CDS
TTTAGCAAGAAAGGGATTTC+TGG 0.228728 1.2:-75105489 MS.gene34141:intron
CCTTCCCTGTGATTCTCTTT+TGG 0.235273 1.2:+75101774 None:intergenic
TTTCAGCATGAATTTGATTA+AGG 0.259296 1.2:-75101722 MS.gene34141:CDS
ACTGGAACAAAAGCTCTTAT+TGG 0.267452 1.2:+75106198 None:intergenic
GCTGAAATCCCAAAGTTTCT+TGG 0.271427 1.2:+75101738 None:intergenic
TCAATTTCTTGTTCTTCTTT+TGG 0.274467 1.2:+75106660 None:intergenic
CTGTAGTTCAATGTTGTCTT+TGG 0.287889 1.2:+75104191 None:intergenic
AGCACTTGCTGTGGCTAATA+TGG 0.317291 1.2:-75106067 MS.gene34141:CDS
GCGTGGTGTCCATGTGATTA+TGG 0.324147 1.2:-75105014 MS.gene34141:CDS
CTATTGGTTATTACCTTGAT+TGG 0.330943 1.2:+75103477 None:intergenic
ACAGGGAAGGGACGCTGATT+TGG 0.337211 1.2:-75101761 MS.gene34141:CDS
CACCAATCTTTCCCGCCATA+TGG 0.337645 1.2:-75102759 MS.gene34141:CDS
CTGATTTGGCCAAGAAACTT+TGG 0.338372 1.2:-75101747 MS.gene34141:CDS
AGTACAAATCCAAAATCTTC+AGG 0.339370 1.2:+75106492 None:intergenic
CACTAACTCCCTTCACTTGT+GGG 0.347652 1.2:+75101824 None:intergenic
AAAGGGATTTCTGGATTCTC+AGG 0.359503 1.2:-75105480 MS.gene34141:CDS
TTCTTCCTTCTTTCTTACTT+TGG 0.363661 1.2:+75103570 None:intergenic
TTCCAGTTCTTTATAATTCA+AGG 0.373089 1.2:-75106182 MS.gene34141:CDS
TGAGATTATCCTTAAGTGAT+TGG 0.378254 1.2:+75106619 None:intergenic
GGAAGAATTGTTAATGTCTC+TGG 0.379542 1.2:-75103554 MS.gene34141:CDS
CTCCTTGAATTATAAAGAAC+TGG 0.382164 1.2:+75106180 None:intergenic
ATGGTTAGCCCTGAAGATTT+TGG 0.385009 1.2:-75106501 MS.gene34141:CDS
ACCCATATGGCGGGAAAGAT+TGG 0.391956 1.2:+75102757 None:intergenic
CAGCTAAACAATTGAGTTGT+CGG 0.396906 1.2:+75106550 None:intergenic
TGATTTGGCCAAGAAACTTT+GGG 0.404072 1.2:-75101746 MS.gene34141:CDS
ACAGGAGCAACCAGTGGTAT+TGG 0.407904 1.2:-75105064 MS.gene34141:intron
TATAACAAACAGAGTGCATA+TGG 0.410551 1.2:-75102970 MS.gene34141:CDS
TGGAATATTTGAAGGTGATA+AGG 0.427078 1.2:-75106310 MS.gene34141:CDS
ACAGGTATAATACAGGTGAT+TGG 0.428022 1.2:-75102088 MS.gene34141:intron
CCACTAACTCCCTTCACTTG+TGG 0.434032 1.2:+75101823 None:intergenic
CAGGTATAATACAGGTGATT+GGG 0.437343 1.2:-75102087 MS.gene34141:CDS
TCTGGTGGAGTTGGACCAAC+TGG 0.442420 1.2:-75106699 MS.gene34141:CDS
CCACAAGTGAAGGGAGTTAG+TGG 0.447541 1.2:-75101823 MS.gene34141:CDS
ACAAAATTAATGACCAATCA+AGG 0.448930 1.2:-75103490 MS.gene34141:intron
TATCAAAGCAGCAATACTTA+AGG 0.461173 1.2:-75104963 MS.gene34141:CDS
CCACATACCTAAGTGGTTTG+TGG 0.461540 1.2:+75104164 None:intergenic
GAGGCGTCTTGCAAGCTCAT+TGG 0.461840 1.2:+75102918 None:intergenic
ACAACAAGACCAATCACTTA+AGG 0.462684 1.2:-75106628 MS.gene34141:CDS
AAGACCAGAGGAGTTGAATT+CGG 0.463073 1.2:+75104868 None:intergenic
CCATGTAAAATATATGCTAT+AGG 0.465903 1.2:+75106330 None:intergenic
ATGTGGCCATTTAGCAAGAA+AGG 0.474068 1.2:-75105498 MS.gene34141:intron
AGATTGGTGAGAATGATTCC+TGG 0.477751 1.2:+75102773 None:intergenic
ACTCATGGAATTGATGCAAC+TGG 0.480827 1.2:-75105435 MS.gene34141:CDS
GCATCCGAATTCAACTCCTC+TGG 0.483856 1.2:-75104872 MS.gene34141:CDS
GTACATCTTGATCAGGATGA+TGG 0.489357 1.2:-75102824 MS.gene34141:intron
GGAGTTAGATCTCAGTTCAA+TGG 0.492329 1.2:-75104912 MS.gene34141:CDS
TTGTCTTTGGACAGCATGAA+AGG 0.496194 1.2:+75104204 None:intergenic
ACTATGCTCTTCACCAACCT+TGG 0.496587 1.2:+75106119 None:intergenic
GTACAAATCCAAAATCTTCA+GGG 0.500340 1.2:+75106493 None:intergenic
CAGTTTGCCACAAACCACTT+AGG 0.502711 1.2:-75104171 MS.gene34141:intron
TCTTATAAAAGGATTTATGC+TGG 0.505951 1.2:-75106093 MS.gene34141:CDS
TACACATTTGCATATTCTGA+AGG 0.510036 1.2:-75103524 MS.gene34141:CDS
ACCAATCTTTCCCGCCATAT+GGG 0.511754 1.2:-75102758 MS.gene34141:CDS
CAGCATGAATTTGATTAAGG+AGG 0.517327 1.2:-75101719 MS.gene34141:CDS
TGTGGCCAAAAGAGAATCAC+AGG 0.521249 1.2:-75101779 MS.gene34141:CDS
GGTCTCACTGCTATTGTCAC+TGG 0.523841 1.2:-75105414 MS.gene34141:intron
TACCGTGGATTACACCCATA+TGG 0.529890 1.2:+75102744 None:intergenic
GCACACCAAAGTAAGAAAGA+AGG 0.532094 1.2:-75103575 MS.gene34141:CDS
AATTGAGTTGTCGGAATGAG+AGG 0.532641 1.2:+75106559 None:intergenic
TGTGGCCATTTAGCAAGAAA+GGG 0.534814 1.2:-75105497 MS.gene34141:intron
CTCAGCTAAAATTGACGTCA+TGG 0.538413 1.2:-75104933 MS.gene34141:CDS
ATTGTGAATTCTCTTCATCC+AGG 0.539076 1.2:-75102791 MS.gene34141:CDS
TTCAGGGCTAACCATGCCAC+TGG 0.540431 1.2:+75106509 None:intergenic
TTATGCAACAGGTATAATAC+AGG 0.545042 1.2:-75102095 MS.gene34141:intron
CGCCATATGGGTGTAATCCA+CGG 0.545789 1.2:-75102746 MS.gene34141:intron
AGAGATGAGATTTCCAAGGT+TGG 0.547974 1.2:-75106132 MS.gene34141:CDS
AGCATTGCACCCACAAGTGA+AGG 0.549189 1.2:-75101833 MS.gene34141:CDS
ACTGCTGAACAAGTTACTCA+TGG 0.551436 1.2:-75105450 MS.gene34141:CDS
TGTCTTTGGACAGCATGAAA+GGG 0.554321 1.2:+75104205 None:intergenic
GTAATTGCAAGAAACAATGC+AGG 0.558972 1.2:-75104240 MS.gene34141:intron
TGAGCTTGCAAGACGCCTCA+AGG 0.566834 1.2:-75102914 MS.gene34141:intron
ATATTGCCCACATACCTAAG+TGG 0.571755 1.2:+75104157 None:intergenic
TACATCTTGATCAGGATGAT+GGG 0.576392 1.2:-75102823 MS.gene34141:intron
GTGGATTACACCCATATGGC+GGG 0.577534 1.2:+75102748 None:intergenic
CAAAAGAGAATCACAGGGAA+GGG 0.585563 1.2:-75101773 MS.gene34141:CDS
AAGGGATTTCTGGATTCTCA+GGG 0.585889 1.2:-75105479 MS.gene34141:CDS
GTTTAGAGATGAGATTTCCA+AGG 0.593748 1.2:-75106136 MS.gene34141:CDS
AGTCTCAACTCCAATACCAC+TGG 0.604354 1.2:+75105054 None:intergenic
AATTGTTAATGTCTCTGGAG+AGG 0.607553 1.2:-75103549 MS.gene34141:CDS
AGGCTAATGTCACAGCCAGT+TGG 0.608232 1.2:+75106684 None:intergenic
TGCTGGAAGAGCACTTGCTG+TGG 0.614632 1.2:-75106076 MS.gene34141:CDS
CCAAAAGAGAATCACAGGGA+AGG 0.615970 1.2:-75101774 MS.gene34141:CDS
ATATTTGAAGGTGATAAGGA+AGG 0.616957 1.2:-75106306 MS.gene34141:CDS
ACGCGTGTTCTTGCTTTGCG+TGG 0.623338 1.2:-75105031 MS.gene34141:CDS
GCATTGCACCCACAAGTGAA+GGG 0.624705 1.2:-75101832 MS.gene34141:CDS
TCTTGATCAGGATGATGGGG+TGG 0.624894 1.2:-75102819 MS.gene34141:intron
CGTGGATTACACCCATATGG+CGG 0.632054 1.2:+75102747 None:intergenic
TTCTAACTGCCATAATCACA+TGG 0.635016 1.2:+75105005 None:intergenic
ACATCTTGATCAGGATGATG+GGG 0.638996 1.2:-75102822 MS.gene34141:intron
GATGTTCAACAGAAGACCAG+AGG 0.660302 1.2:+75104856 None:intergenic
AAGGTTGGTGAAGAGCATAG+TGG 0.672560 1.2:-75106117 MS.gene34141:CDS
CAGTTCTTTATAATTCAAGG+AGG 0.676845 1.2:-75106179 MS.gene34141:CDS
ATGGTAACAGGAGCAACCAG+TGG 0.704592 1.2:-75105070 MS.gene34141:intron
GTGGCCAAAAGAGAATCACA+GGG 0.763656 1.2:-75101778 MS.gene34141:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATATTATAACAATTATTA+TGG + chr1.2:75103738-75103757 None:intergenic 10.0%
!!! ATCAATTTTATATAAGATTT+AGG + chr1.2:75102779-75102798 None:intergenic 10.0%
!!! TTTTGTATTTTGTTTTTAAA+TGG - chr1.2:75104999-75105018 MS.gene34141:CDS 10.0%
!! TAATTAAATAAATTTGACAG+TGG - chr1.2:75102560-75102579 MS.gene34141:intron 15.0%
!! TGTAAAACTTTAAATTAAGT+TGG + chr1.2:75103658-75103677 None:intergenic 15.0%
!! TTGATATATATAACATTACT+TGG - chr1.2:75105570-75105589 MS.gene34141:intron 15.0%
!! TTGTTATAAACGTTTATTAA+GGG - chr1.2:75106442-75106461 MS.gene34141:CDS 15.0%
!!! AATGCAATTTACTTTTTAAA+TGG + chr1.2:75103684-75103703 None:intergenic 15.0%
!!! AATTTTATATAAGATTTAGG+TGG + chr1.2:75102776-75102795 None:intergenic 15.0%
!!! ATAATAGAGAATTTTATTCT+TGG - chr1.2:75105055-75105074 MS.gene34141:CDS 15.0%
!!! ATTTTATATAAGATTTAGGT+GGG + chr1.2:75102775-75102794 None:intergenic 15.0%
!!! TAATAGAGAATTTTATTCTT+GGG - chr1.2:75105056-75105075 MS.gene34141:CDS 15.0%
!!! TTATCTGATTATTTTGAATT+GGG - chr1.2:75106162-75106181 MS.gene34141:CDS 15.0%
!!! TTTATCTGATTATTTTGAAT+TGG - chr1.2:75106161-75106180 MS.gene34141:CDS 15.0%
!! AAGTAAATTAAGGAATGATT+AGG - chr1.2:75102453-75102472 MS.gene34141:intron 20.0%
!! AATCAAATGAATAAAGAACT+CGG + chr1.2:75104308-75104327 None:intergenic 20.0%
!! ATAAAACTACTATTCAACAA+AGG + chr1.2:75103085-75103104 None:intergenic 20.0%
!! ATACGAGTAAATAAATGATT+AGG + chr1.2:75105869-75105888 None:intergenic 20.0%
!! ATCATTCCTTAATTTACTTT+CGG + chr1.2:75102452-75102471 None:intergenic 20.0%
!! ATGCATTATTAGTGTAAAAT+AGG + chr1.2:75104541-75104560 None:intergenic 20.0%
!! CTACATATATTCATACATAA+AGG + chr1.2:75103134-75103153 None:intergenic 20.0%
!! CTATGAAAACATAAAGTTTA+AGG + chr1.2:75102043-75102062 None:intergenic 20.0%
!! GGCTATGAAAAATTATTATA+TGG - chr1.2:75103313-75103332 MS.gene34141:intron 20.0%
!! GTAAAATAATGGTATTTCAT+TGG + chr1.2:75104436-75104455 None:intergenic 20.0%
!! GTTGTTATAAACGTTTATTA+AGG - chr1.2:75106441-75106460 MS.gene34141:CDS 20.0%
!! TAAAACTACTATTCAACAAA+GGG + chr1.2:75103084-75103103 None:intergenic 20.0%
!! TAACAACTTCAATAAAAATC+AGG + chr1.2:75104049-75104068 None:intergenic 20.0%
!! TACGAGTAAATAAATGATTA+GGG + chr1.2:75105868-75105887 None:intergenic 20.0%
!! TCTAATAAAATGAAGAGAAA+AGG - chr1.2:75104370-75104389 MS.gene34141:intron 20.0%
!! TGTGATTATGATATGTATTT+CGG - chr1.2:75105136-75105155 MS.gene34141:intron 20.0%
!!! AAAACTTTAAATTAAGTTGG+AGG + chr1.2:75103655-75103674 None:intergenic 20.0%
!!! ATTTTACATGGAATATTTGA+AGG - chr1.2:75102098-75102117 MS.gene34141:intron 20.0%
!!! ATTTTGTTTTTAAATGGAAG+AGG - chr1.2:75105005-75105024 MS.gene34141:CDS 20.0%
!!! CTTAAACTTTATGTTTTCAT+AGG - chr1.2:75102041-75102060 MS.gene34141:intron 20.0%
!!! GTTTATGTATGATTTGTATA+AGG - chr1.2:75102491-75102510 MS.gene34141:intron 20.0%
!!! TAGAAAACAAACACATTTTA+TGG + chr1.2:75106246-75106265 None:intergenic 20.0%
!!! TCTGTATCAAAAATTTTATC+TGG + chr1.2:75105187-75105206 None:intergenic 20.0%
! AAAAATTAAGAGTGGAAATG+TGG - chr1.2:75105395-75105414 MS.gene34141:intron 25.0%
! AACATAGTGACATAATAACA+TGG - chr1.2:75102679-75102698 MS.gene34141:intron 25.0%
! AATATGCATACTTTGTACAT+TGG - chr1.2:75102612-75102631 MS.gene34141:intron 25.0%
! ACAAAATTAATGACCAATCA+AGG - chr1.2:75104926-75104945 MS.gene34141:CDS 25.0%
! ACCTATGATTTATAAATGTG+AGG - chr1.2:75106398-75106417 MS.gene34141:CDS 25.0%
! ACGAGTAAATAAATGATTAG+GGG + chr1.2:75105867-75105886 None:intergenic 25.0%
! ACTACAGTATAAAAAAACGT+AGG + chr1.2:75105997-75106016 None:intergenic 25.0%
! AGTAATAATGTATGAATGAG+TGG + chr1.2:75106132-75106151 None:intergenic 25.0%
! ATTATATGGATATGATGACA+TGG - chr1.2:75103327-75103346 MS.gene34141:intron 25.0%
! CAACATAAATGGCAAATAAA+AGG + chr1.2:75104023-75104042 None:intergenic 25.0%
! CCATGTAAAATATATGCTAT+AGG + chr1.2:75102089-75102108 None:intergenic 25.0%
! CCTATGATTTATAAATGTGA+GGG - chr1.2:75106399-75106418 MS.gene34141:CDS 25.0%
! GAAATACACACATTTGTATA+TGG - chr1.2:75102582-75102601 MS.gene34141:intron 25.0%
! GAATTCATCTTAGAGTTTAA+TGG + chr1.2:75104566-75104585 None:intergenic 25.0%
! TATTTGAATGATGACATCAT+TGG - chr1.2:75102712-75102731 MS.gene34141:intron 25.0%
! TCATTCATCTACATTACTAT+AGG - chr1.2:75105820-75105839 MS.gene34141:intron 25.0%
! TCATTCCTTAATTTACTTTC+GGG + chr1.2:75102451-75102470 None:intergenic 25.0%
! TCTAATCTGTGTTTCTTTAT+TGG + chr1.2:75106469-75106488 None:intergenic 25.0%
! TCTTATAAAAGGATTTATGC+TGG - chr1.2:75102323-75102342 MS.gene34141:intron 25.0%
! TTACATCAAATTCTTGCAAT+TGG - chr1.2:75103292-75103311 MS.gene34141:intron 25.0%
! TTCCAGTTCTTTATAATTCA+AGG - chr1.2:75102234-75102253 MS.gene34141:intron 25.0%
! TTGAACAGGATAAAGATAAA+AGG - chr1.2:75103919-75103938 MS.gene34141:intron 25.0%
! TTTCAGCATGAATTTGATTA+AGG - chr1.2:75106694-75106713 MS.gene34141:CDS 25.0%
!! AAAATAGGTTGTTCTTTTGA+AGG + chr1.2:75102002-75102021 None:intergenic 25.0%
!! AAATAGGTTGTTCTTTTGAA+GGG + chr1.2:75102001-75102020 None:intergenic 25.0%
!! CCTATAGCATATATTTTACA+TGG - chr1.2:75102086-75102105 MS.gene34141:CDS 25.0%
!! CTTTTTCCTATCTAAATGTA+GGG - chr1.2:75106539-75106558 MS.gene34141:CDS 25.0%
!! GGTCATTAATTTTGTCAAAA+CGG + chr1.2:75104921-75104940 None:intergenic 25.0%
!! TAAATGATTAGGGGTATAAT+AGG + chr1.2:75105858-75105877 None:intergenic 25.0%
!! TCAATTTCTTGTTCTTCTTT+TGG + chr1.2:75101759-75101778 None:intergenic 25.0%
!! TCTCTTAACAAATCTTTTGT+TGG - chr1.2:75104801-75104820 MS.gene34141:intron 25.0%
!! TTATGTTTGATTTATGCAAC+AGG - chr1.2:75106310-75106329 MS.gene34141:CDS 25.0%
!! TTTTTCCTATCTAAATGTAG+GGG - chr1.2:75106540-75106559 MS.gene34141:CDS 25.0%
!!! AATCGTTTTAACTGTAAACA+TGG + chr1.2:75105356-75105375 None:intergenic 25.0%
!!! ACTTTTTCCTATCTAAATGT+AGG - chr1.2:75106538-75106557 MS.gene34141:CDS 25.0%
!!! GAAACATTACGAGTTTTAAT+TGG - chr1.2:75104495-75104514 MS.gene34141:intron 25.0%
!!! GTATTTTTCAGACAATAATG+TGG - chr1.2:75106619-75106638 MS.gene34141:CDS 25.0%
!!! GTTTGTTATAACTGTATACA+AGG + chr1.2:75105436-75105455 None:intergenic 25.0%
!!! TAATACGCTTTAAAAACTCT+AGG + chr1.2:75102422-75102441 None:intergenic 25.0%
!!! TACGAGTTTTAATTGGAATT+TGG - chr1.2:75104502-75104521 MS.gene34141:intron 25.0%
!!! TACGTTTTTTTATACTGTAG+TGG - chr1.2:75105996-75106015 MS.gene34141:intron 25.0%
!!! TTGTTTTGTTGAGTGAAAAT+AGG + chr1.2:75102017-75102036 None:intergenic 25.0%
!!! TTTTGGTGCTTTAATTTGTT+TGG - chr1.2:75102374-75102393 MS.gene34141:intron 25.0%
AAATCAGGAGTCAACATAAA+TGG + chr1.2:75104034-75104053 None:intergenic 30.0%
AAATGAATAAAGAACTCGGT+TGG + chr1.2:75104304-75104323 None:intergenic 30.0%
AGAATGAAAGTTAGTTGAAC+AGG - chr1.2:75103905-75103924 MS.gene34141:intron 30.0%
AGCATAGTGGTTCTTATAAA+AGG - chr1.2:75102312-75102331 MS.gene34141:intron 30.0%
AGTACAAATCCAAAATCTTC+AGG + chr1.2:75101927-75101946 None:intergenic 30.0%
ATATTTGAAGGTGATAAGGA+AGG - chr1.2:75102110-75102129 MS.gene34141:intron 30.0%
CAATCAAGGTAATAACCAAT+AGG - chr1.2:75104940-75104959 MS.gene34141:CDS 30.0%
CAGATATGATATTGATCACA+TGG - chr1.2:75105214-75105233 MS.gene34141:intron 30.0%
CAGTTCTTTATAATTCAAGG+AGG - chr1.2:75102237-75102256 MS.gene34141:intron 30.0%
CATGATCAAGAAAGATAAAC+TGG + chr1.2:75104107-75104126 None:intergenic 30.0%
CATTCAGGAAGTTAAATATG+TGG - chr1.2:75106085-75106104 MS.gene34141:CDS 30.0%
CCCTCACATTTATAAATCAT+AGG + chr1.2:75106402-75106421 None:intergenic 30.0%
CTCCTTGAATTATAAAGAAC+TGG + chr1.2:75102239-75102258 None:intergenic 30.0%
GAACATCTTGATGTAAGAAA+AGG - chr1.2:75103576-75103595 MS.gene34141:CDS 30.0%
GTACAAATCCAAAATCTTCA+GGG + chr1.2:75101926-75101945 None:intergenic 30.0%
GTACAACAAGATAATCATTC+AGG - chr1.2:75106070-75106089 MS.gene34141:CDS 30.0%
GTTGCATGAAAAATTAAGAG+TGG - chr1.2:75105387-75105406 MS.gene34141:intron 30.0%
TAAAACTCGTAATGTTTCCA+TGG + chr1.2:75104493-75104512 None:intergenic 30.0%
TAAATTAAGTTAACAGACCC+AGG - chr1.2:75103987-75104006 MS.gene34141:intron 30.0%
TAATTGGAATTTGGATGTCA+GGG - chr1.2:75104511-75104530 MS.gene34141:intron 30.0%
TACACATTTGCATATTCTGA+AGG - chr1.2:75104892-75104911 MS.gene34141:CDS 30.0%
TAGTAAATTACCTTCATCCT+TGG + chr1.2:75105908-75105927 None:intergenic 30.0%
TATAACAAACAGAGTGCATA+TGG - chr1.2:75105446-75105465 MS.gene34141:CDS 30.0%
TATCAAAGCAGCAATACTTA+AGG - chr1.2:75103453-75103472 MS.gene34141:intron 30.0%
TGAGATTATCCTTAAGTGAT+TGG + chr1.2:75101800-75101819 None:intergenic 30.0%
TGGAATATTTGAAGGTGATA+AGG - chr1.2:75102106-75102125 MS.gene34141:intron 30.0%
TTAATTGGAATTTGGATGTC+AGG - chr1.2:75104510-75104529 MS.gene34141:intron 30.0%
TTATGCAACAGGTATAATAC+AGG - chr1.2:75106321-75106340 MS.gene34141:CDS 30.0%
TTCTTCCTTCTTTCTTACTT+TGG + chr1.2:75104849-75104868 None:intergenic 30.0%
TTCTTGATCATGTTCATTCA+AGG - chr1.2:75104115-75104134 MS.gene34141:intron 30.0%
TTTGAACATAGGTTACCTAT+TGG + chr1.2:75104958-75104977 None:intergenic 30.0%
! AAAACTCTAGGAAGATAAAC+AGG + chr1.2:75102410-75102429 None:intergenic 30.0%
! ATTGACTTTGTGAATTGTGA+CGG - chr1.2:75102869-75102888 MS.gene34141:intron 30.0%
! CAGTTTTGCCTAAATAAAGA+TGG + chr1.2:75103622-75103641 None:intergenic 30.0%
! CTATTGGTTATTACCTTGAT+TGG + chr1.2:75104942-75104961 None:intergenic 30.0%
! CTTAATTTTTCATGCAACCA+TGG + chr1.2:75105385-75105404 None:intergenic 30.0%
! CTTTTCATCATTTAGACTTG+AGG - chr1.2:75103154-75103173 MS.gene34141:intron 30.0%
! GTTTTATGTTGCAGAGTTAT+GGG - chr1.2:75103098-75103117 MS.gene34141:intron 30.0%
! TACACCACATGTTTTTCTTT+TGG - chr1.2:75102145-75102164 MS.gene34141:intron 30.0%
! TCTAAGATGAATTCCTATGT+GGG - chr1.2:75104572-75104591 MS.gene34141:intron 30.0%
! TTCTTGTAGTACTTGTTGAA+AGG - chr1.2:75105309-75105328 MS.gene34141:intron 30.0%
! TTTCTTGTTCTTCTTTTGGT+AGG + chr1.2:75101755-75101774 None:intergenic 30.0%
! TTTTATGTTGCAGAGTTATG+GGG - chr1.2:75103099-75103118 MS.gene34141:intron 30.0%
! TTTTCCTATCTAAATGTAGG+GGG - chr1.2:75106541-75106560 MS.gene34141:CDS 30.0%
!! AGTTTTATGTTGCAGAGTTA+TGG - chr1.2:75103097-75103116 MS.gene34141:intron 30.0%
!! GGGCAATATGTTTGATTTTA+AGG - chr1.2:75104273-75104292 MS.gene34141:intron 30.0%
!! TTTGGCTAGTCAAGTTTTTA+TGG - chr1.2:75102163-75102182 MS.gene34141:intron 30.0%
!!! AGGAAACTAGTTTTTCTTTG+TGG + chr1.2:75101840-75101859 None:intergenic 30.0%
!!! TCTGATTATTTTGAATTGGG+TGG - chr1.2:75106165-75106184 MS.gene34141:CDS 30.0%
AAACCATCATGTAATTGTGC+AGG - chr1.2:75104772-75104791 MS.gene34141:intron 35.0%
AAAGTCAATAGTGCAGATCA+TGG + chr1.2:75102858-75102877 None:intergenic 35.0%
AAATCCACGATAGATAATGC+AGG + chr1.2:75105784-75105803 None:intergenic 35.0%
AATAACCAGCAGAAAAGTCA+TGG + chr1.2:75102524-75102543 None:intergenic 35.0%
ACAACAAGACCAATCACTTA+AGG - chr1.2:75101788-75101807 MS.gene34141:CDS 35.0%
ACAGGTATAATACAGGTGAT+TGG - chr1.2:75106328-75106347 MS.gene34141:CDS 35.0%
ACTGGAACAAAAGCTCTTAT+TGG + chr1.2:75102221-75102240 None:intergenic 35.0%
AGGAATGATTAGGTAGCTAT+AGG - chr1.2:75102463-75102482 MS.gene34141:intron 35.0%
ATTATTAAAGCCCTGTGACA+TGG - chr1.2:75105740-75105759 MS.gene34141:intron 35.0%
ATTGTGAATTCTCTTCATCC+AGG - chr1.2:75105625-75105644 MS.gene34141:intron 35.0%
CAGCATGAATTTGATTAAGG+AGG - chr1.2:75106697-75106716 MS.gene34141:CDS 35.0%
CAGGTATAATACAGGTGATT+GGG - chr1.2:75106329-75106348 MS.gene34141:CDS 35.0%
CCAGAAAACATTACTACTAC+TGG + chr1.2:75104145-75104164 None:intergenic 35.0%
CGTGAATTAAGAAACGTAGT+TGG + chr1.2:75105964-75105983 None:intergenic 35.0%
CTAGCCAAAAGAAAAACATG+TGG + chr1.2:75102152-75102171 None:intergenic 35.0%
CTGTAGTTCAATGTTGTCTT+TGG + chr1.2:75104228-75104247 None:intergenic 35.0%
GAAATCCCTTTCTTGCTAAA+TGG + chr1.2:75102927-75102946 None:intergenic 35.0%
GATGTAGATGATCAAGAACT+CGG - chr1.2:75104624-75104643 MS.gene34141:intron 35.0%
GGAAGAATTGTTAATGTCTC+TGG - chr1.2:75104862-75104881 MS.gene34141:CDS 35.0%
GGAATGATTAGGTAGCTATA+GGG - chr1.2:75102464-75102483 MS.gene34141:intron 35.0%
GGGTCGTGTCAAATAAATAT+TGG - chr1.2:75106419-75106438 MS.gene34141:CDS 35.0%
GTAATTGCAAGAAACAATGC+AGG - chr1.2:75104176-75104195 MS.gene34141:CDS 35.0%
GTACAAGATAATAGTTACCG+TGG + chr1.2:75105690-75105709 None:intergenic 35.0%
GTGATCAATATCATATCTGC+AGG + chr1.2:75105213-75105232 None:intergenic 35.0%
GTTGTACGTTATAGATGAGT+TGG + chr1.2:75106057-75106076 None:intergenic 35.0%
GTTTAGAGATGAGATTTCCA+AGG - chr1.2:75102280-75102299 MS.gene34141:intron 35.0%
TACATCTTGATCAGGATGAT+GGG - chr1.2:75105593-75105612 MS.gene34141:intron 35.0%
TATGAATGAGTGGTGAAAGT+TGG + chr1.2:75106122-75106141 None:intergenic 35.0%
TATGTTGAAGATGAGATGTG+TGG + chr1.2:75102665-75102684 None:intergenic 35.0%
TCAAGCCCGAAAGTAAATTA+AGG - chr1.2:75102443-75102462 MS.gene34141:intron 35.0%
TCTCGTGATGATTTGAACAT+AGG + chr1.2:75104969-75104988 None:intergenic 35.0%
TGTGATGAAAAATGTTCAGC+AGG - chr1.2:75106357-75106376 MS.gene34141:CDS 35.0%
TTAAAACGATTGTCTCACCA+TGG - chr1.2:75105365-75105384 MS.gene34141:intron 35.0%
TTACTTGGTACATCTTGATC+AGG - chr1.2:75105585-75105604 MS.gene34141:intron 35.0%
TTCTAACTGCCATAATCACA+TGG + chr1.2:75103414-75103433 None:intergenic 35.0%
TTTAGCAAGAAAGGGATTTC+TGG - chr1.2:75102927-75102946 MS.gene34141:CDS 35.0%
! AAGGAGGATTTTCACTATTG+TGG - chr1.2:75102253-75102272 MS.gene34141:intron 35.0%
! AATTGTTAATGTCTCTGGAG+AGG - chr1.2:75104867-75104886 MS.gene34141:CDS 35.0%
! ATTTAGAATGCCATGTCACA+GGG + chr1.2:75105753-75105772 None:intergenic 35.0%
! CAGCTAAACAATTGAGTTGT+CGG + chr1.2:75101869-75101888 None:intergenic 35.0%
! CCAGTAGTAGTAATGTTTTC+TGG - chr1.2:75104142-75104161 MS.gene34141:intron 35.0%
! GAATTTTATTCTTGGGCACT+CGG - chr1.2:75105063-75105082 MS.gene34141:CDS 35.0%
! GATTTTCCATTACCATCATG+TGG - chr1.2:75102901-75102920 MS.gene34141:intron 35.0%
! GCTAGTCAAGTTTTTATGGA+AGG - chr1.2:75102167-75102186 MS.gene34141:intron 35.0%
! GGATTTTCACTATTGTGGAT+TGG - chr1.2:75102258-75102277 MS.gene34141:intron 35.0%
! GTTTTCATAGGAGCAATCAT+TGG - chr1.2:75102053-75102072 MS.gene34141:intron 35.0%
! TCGCAGTACCATCTTTATTT+AGG - chr1.2:75103611-75103630 MS.gene34141:CDS 35.0%
! TGATTTGGCCAAGAAACTTT+GGG - chr1.2:75106670-75106689 MS.gene34141:CDS 35.0%
! TTGTAGTACTTGTTGAAAGG+AGG - chr1.2:75105312-75105331 MS.gene34141:intron 35.0%
! TTTGAATTGGGTGGTTTTTC+TGG - chr1.2:75106174-75106193 MS.gene34141:CDS 35.0%
! TTTTCCTGCATTATCTATCG+TGG - chr1.2:75105777-75105796 MS.gene34141:intron 35.0%
!! CTCTAAGATGAATTCCTATG+TGG - chr1.2:75104571-75104590 MS.gene34141:intron 35.0%
!!! ACTAGTTTTTCTTTGTGGTG+TGG + chr1.2:75101835-75101854 None:intergenic 35.0%
!!! ATGACGTCAATTTTAGCTGA+GGG + chr1.2:75103484-75103503 None:intergenic 35.0%
!!! GAAGGTGTTGCATTTTCAAA+TGG - chr1.2:75102185-75102204 MS.gene34141:intron 35.0%
!!! GGTCTAATTTTGTTGTTGAG+TGG - chr1.2:75103824-75103843 MS.gene34141:intron 35.0%
AAATGGCCACATGATGGTAA+TGG + chr1.2:75102910-75102929 None:intergenic 40.0%
AAGACCAGAGGAGTTGAATT+CGG + chr1.2:75103551-75103570 None:intergenic 40.0%
ACATCTTGATCAGGATGATG+GGG - chr1.2:75105594-75105613 MS.gene34141:intron 40.0%
ACTCATGGAATTGATGCAAC+TGG - chr1.2:75102981-75103000 MS.gene34141:intron 40.0%
ACTGCTGAACAAGTTACTCA+TGG - chr1.2:75102966-75102985 MS.gene34141:CDS 40.0%
AGAGAAAAGGAGACATACAC+TGG - chr1.2:75104383-75104402 MS.gene34141:intron 40.0%
AGAGAAACTAGCATACCTTG+AGG + chr1.2:75105520-75105539 None:intergenic 40.0%
AGAGATGAGATTTCCAAGGT+TGG - chr1.2:75102284-75102303 MS.gene34141:intron 40.0%
AGATTGGTGAGAATGATTCC+TGG + chr1.2:75105646-75105665 None:intergenic 40.0%
AGTTACAAAGTGTGCTTCCA+TGG - chr1.2:75104473-75104492 MS.gene34141:intron 40.0%
ATAAAAGGCAAATCTGCACC+TGG + chr1.2:75104008-75104027 None:intergenic 40.0%
ATATTGCCCACATACCTAAG+TGG + chr1.2:75104262-75104281 None:intergenic 40.0%
ATGTGGCCATTTAGCAAGAA+AGG - chr1.2:75102918-75102937 MS.gene34141:CDS 40.0%
CAAAAGAGAATCACAGGGAA+GGG - chr1.2:75106643-75106662 MS.gene34141:CDS 40.0%
CACAAACCACTTAGGTATGT+GGG - chr1.2:75104253-75104272 MS.gene34141:intron 40.0%
CATTGGAATGCGTTCTTATC+AGG - chr1.2:75102629-75102648 MS.gene34141:intron 40.0%
CTACTATTCAACAAAGGGCA+TGG + chr1.2:75103079-75103098 None:intergenic 40.0%
CTCAGCTAAAATTGACGTCA+TGG - chr1.2:75103483-75103502 MS.gene34141:intron 40.0%
CTGCTGAAATTTGCATAGTC+AGG - chr1.2:75103242-75103261 MS.gene34141:intron 40.0%
GAATAAAGAACTCGGTTGGT+TGG + chr1.2:75104300-75104319 None:intergenic 40.0%
GCACACCAAAGTAAGAAAGA+AGG - chr1.2:75104841-75104860 MS.gene34141:intron 40.0%
GCTGAAATCCCAAAGTTTCT+TGG + chr1.2:75106681-75106700 None:intergenic 40.0%
GGAGTTAGATCTCAGTTCAA+TGG - chr1.2:75103504-75103523 MS.gene34141:CDS 40.0%
GGATATGATGACATGGTAAC+AGG - chr1.2:75103334-75103353 MS.gene34141:intron 40.0%
GTACATCTTGATCAGGATGA+TGG - chr1.2:75105592-75105611 MS.gene34141:intron 40.0%
TAAAAGGCAAATCTGCACCT+GGG + chr1.2:75104007-75104026 None:intergenic 40.0%
TAATTCCCTTTCTCAGACCA+AGG - chr1.2:75105888-75105907 MS.gene34141:intron 40.0%
TGACCTGCACAATTACATGA+TGG + chr1.2:75104778-75104797 None:intergenic 40.0%
TGTAAGAAAAGGAACCGACA+TGG - chr1.2:75103587-75103606 MS.gene34141:CDS 40.0%
TGTCTTTGGACAGCATGAAA+GGG + chr1.2:75104214-75104233 None:intergenic 40.0%
TGTGGCCATTTAGCAAGAAA+GGG - chr1.2:75102919-75102938 MS.gene34141:CDS 40.0%
TTCATCCTTGGTCTGAGAAA+GGG + chr1.2:75105896-75105915 None:intergenic 40.0%
TTGTCTTTGGACAGCATGAA+AGG + chr1.2:75104215-75104234 None:intergenic 40.0%
! AAAGGGATTTCTGGATTCTC+AGG - chr1.2:75102936-75102955 MS.gene34141:CDS 40.0%
! AAGGGATTTCTGGATTCTCA+GGG - chr1.2:75102937-75102956 MS.gene34141:CDS 40.0%
! AATTGAGTTGTCGGAATGAG+AGG + chr1.2:75101860-75101879 None:intergenic 40.0%
! CATTTAGAATGCCATGTCAC+AGG + chr1.2:75105754-75105773 None:intergenic 40.0%
! CTGTGGCTAATATGGCTTTT+TGG - chr1.2:75102357-75102376 MS.gene34141:intron 40.0%
! TTGAACCATGACTTTTCTGC+TGG - chr1.2:75102516-75102535 MS.gene34141:intron 40.0%
!! ATGGTTAGCCCTGAAGATTT+TGG - chr1.2:75101915-75101934 MS.gene34141:intron 40.0%
!! CTGATTTGGCCAAGAAACTT+TGG - chr1.2:75106669-75106688 MS.gene34141:CDS 40.0%
!! TGGTTTGTTTGTTTGCACAC+TGG - chr1.2:75106194-75106213 MS.gene34141:CDS 40.0%
!! TGTTCTTTTGAAGGGTGAGA+TGG + chr1.2:75101993-75102012 None:intergenic 40.0%
!!! CATGACGTCAATTTTAGCTG+AGG + chr1.2:75103485-75103504 None:intergenic 40.0%
!!! GTTGTTGTTTTATCAGCCAG+TGG - chr1.2:75101891-75101910 MS.gene34141:intron 40.0%
AACACAGACACACATGGTGA+GGG + chr1.2:75104084-75104103 None:intergenic 45.0%
AACTGGAACACAGACACACA+TGG + chr1.2:75104090-75104109 None:intergenic 45.0%
ACACACACACACACACATCA+GGG - chr1.2:75104719-75104738 MS.gene34141:intron 45.0%
ACCAATCTTTCCCGCCATAT+GGG - chr1.2:75105658-75105677 MS.gene34141:intron 45.0%
ACTATGCTCTTCACCAACCT+TGG + chr1.2:75102300-75102319 None:intergenic 45.0%
ACTGCAACTGAGATGTGCAT+AGG + chr1.2:75105266-75105285 None:intergenic 45.0%
AGTCTCAACTCCAATACCAC+TGG + chr1.2:75103365-75103384 None:intergenic 45.0%
CACTAACTCCCTTCACTTGT+GGG + chr1.2:75106595-75106614 None:intergenic 45.0%
CAGTTTGCCACAAACCACTT+AGG - chr1.2:75104245-75104264 MS.gene34141:intron 45.0%
CCAAAAGAGAATCACAGGGA+AGG - chr1.2:75106642-75106661 MS.gene34141:CDS 45.0%
CCACAAACCACTTAGGTATG+TGG - chr1.2:75104252-75104271 MS.gene34141:intron 45.0%
CCACATACCTAAGTGGTTTG+TGG + chr1.2:75104255-75104274 None:intergenic 45.0%
CTTCATCCTTGGTCTGAGAA+AGG + chr1.2:75105897-75105916 None:intergenic 45.0%
CTTGCTAAATGGCCACATGA+TGG + chr1.2:75102916-75102935 None:intergenic 45.0%
CTTTCTCAGACCAAGGATGA+AGG - chr1.2:75105895-75105914 MS.gene34141:intron 45.0%
GAATGAGTGGTGAAAGTTGG+TGG + chr1.2:75106119-75106138 None:intergenic 45.0%
GATGTTCAACAGAAGACCAG+AGG + chr1.2:75103563-75103582 None:intergenic 45.0%
GTGGCCAAAAGAGAATCACA+GGG - chr1.2:75106638-75106657 MS.gene34141:CDS 45.0%
GTGTGTGTGTGTAGTGAAGT+AGG + chr1.2:75104693-75104712 None:intergenic 45.0%
TAGACCCTCGAACAACAATG+AGG + chr1.2:75103810-75103829 None:intergenic 45.0%
TGTGGCCAAAAGAGAATCAC+AGG - chr1.2:75106637-75106656 MS.gene34141:CDS 45.0%
! CCTTCCCTGTGATTCTCTTT+TGG + chr1.2:75106645-75106664 None:intergenic 45.0%
! GTGACCTCATTGTTGTTCGA+GGG - chr1.2:75103803-75103822 MS.gene34141:intron 45.0%
! TACCGTGGATTACACCCATA+TGG + chr1.2:75105675-75105694 None:intergenic 45.0%
! TGTGACCTCATTGTTGTTCG+AGG - chr1.2:75103802-75103821 MS.gene34141:intron 45.0%
! TGTTTTATCAGCCAGTGGCA+TGG - chr1.2:75101896-75101915 MS.gene34141:intron 45.0%
! TTTCGGTTTTCTGCGAGTCT+TGG - chr1.2:75105153-75105172 MS.gene34141:intron 45.0%
!! AAGGTTGGTGAAGAGCATAG+TGG - chr1.2:75102299-75102318 MS.gene34141:intron 45.0%
!! AGCACTTGCTGTGGCTAATA+TGG - chr1.2:75102349-75102368 MS.gene34141:intron 45.0%
!! AAATGAAAAAATAAAAAAAA+TGG + chr1.2:75103051-75103070 None:intergenic 5.0%
!! TAAAAATAATTGTAAAATAA+TGG + chr1.2:75104447-75104466 None:intergenic 5.0%
ACAGGAGCAACCAGTGGTAT+TGG - chr1.2:75103352-75103371 MS.gene34141:intron 50.0%
AGCATTGCACCCACAAGTGA+AGG - chr1.2:75106583-75106602 MS.gene34141:CDS 50.0%
AGGCTAATGTCACAGCCAGT+TGG + chr1.2:75101735-75101754 None:intergenic 50.0%
ATGGTAACAGGAGCAACCAG+TGG - chr1.2:75103346-75103365 MS.gene34141:intron 50.0%
CACACACACACACACACATC+AGG - chr1.2:75104718-75104737 MS.gene34141:intron 50.0%
CACACACACACACACATCAG+GGG - chr1.2:75104720-75104739 MS.gene34141:intron 50.0%
CACCAATCTTTCCCGCCATA+TGG - chr1.2:75105657-75105676 MS.gene34141:intron 50.0%
CATCACAGTTGCTCCCACAT+AGG + chr1.2:75104588-75104607 None:intergenic 50.0%
CCACAAGTGAAGGGAGTTAG+TGG - chr1.2:75106593-75106612 MS.gene34141:CDS 50.0%
CCACTAACTCCCTTCACTTG+TGG + chr1.2:75106596-75106615 None:intergenic 50.0%
CGCCATATGGGTGTAATCCA+CGG - chr1.2:75105670-75105689 MS.gene34141:intron 50.0%
GAACACAGACACACATGGTG+AGG + chr1.2:75104085-75104104 None:intergenic 50.0%
GATGGTACTGCGATCCATGT+CGG + chr1.2:75103604-75103623 None:intergenic 50.0%
GCATCCGAATTCAACTCCTC+TGG - chr1.2:75103544-75103563 MS.gene34141:CDS 50.0%
GCATTGCACCCACAAGTGAA+GGG - chr1.2:75106584-75106603 MS.gene34141:CDS 50.0%
GCGTGGTGTCCATGTGATTA+TGG - chr1.2:75103402-75103421 MS.gene34141:intron 50.0%
GCTGCCCCCTACATTTAGAT+AGG + chr1.2:75106548-75106567 None:intergenic 50.0%
GGTCTCACTGCTATTGTCAC+TGG - chr1.2:75103002-75103021 MS.gene34141:intron 50.0%
TGGGCACTCGGCTTTACTAT+TGG - chr1.2:75105075-75105094 MS.gene34141:intron 50.0%
! ACCCATATGGCGGGAAAGAT+TGG + chr1.2:75105662-75105681 None:intergenic 50.0%
! CGTGGATTACACCCATATGG+CGG + chr1.2:75105672-75105691 None:intergenic 50.0%
! GTGGATTACACCCATATGGC+GGG + chr1.2:75105671-75105690 None:intergenic 50.0%
!! TCTTGATCAGGATGATGGGG+TGG - chr1.2:75105597-75105616 MS.gene34141:intron 50.0%
ACGCGTGTTCTTGCTTTGCG+TGG - chr1.2:75103385-75103404 MS.gene34141:intron 55.0%
TCTGGTGGAGTTGGACCAAC+TGG - chr1.2:75101717-75101736 MS.gene34141:CDS 55.0%
TGAGCTTGCAAGACGCCTCA+AGG - chr1.2:75105502-75105521 MS.gene34141:intron 55.0%
TTCAGGGCTAACCATGCCAC+TGG + chr1.2:75101910-75101929 None:intergenic 55.0%
! ACAGGGAAGGGACGCTGATT+TGG - chr1.2:75106655-75106674 MS.gene34141:CDS 55.0%
! GAGGCGTCTTGCAAGCTCAT+TGG + chr1.2:75105501-75105520 None:intergenic 55.0%
!! TGCTGGAAGAGCACTTGCTG+TGG - chr1.2:75102340-75102359 MS.gene34141:intron 55.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 75101714 75106724 75101714 ID=MS.gene34141
chr1.2 mRNA 75101714 75106724 75101714 ID=MS.gene34141.t1;Parent=MS.gene34141
chr1.2 exon 75106060 75106724 75106060 ID=MS.gene34141.t1.exon1;Parent=MS.gene34141.t1
chr1.2 CDS 75106060 75106724 75106060 ID=cds.MS.gene34141.t1;Parent=MS.gene34141.t1
chr1.2 exon 75105415 75105506 75105415 ID=MS.gene34141.t1.exon2;Parent=MS.gene34141.t1
chr1.2 CDS 75105415 75105506 75105415 ID=cds.MS.gene34141.t1;Parent=MS.gene34141.t1
chr1.2 exon 75104851 75105082 75104851 ID=MS.gene34141.t1.exon3;Parent=MS.gene34141.t1
chr1.2 CDS 75104851 75105082 75104851 ID=cds.MS.gene34141.t1;Parent=MS.gene34141.t1
chr1.2 exon 75104172 75104251 75104172 ID=MS.gene34141.t1.exon4;Parent=MS.gene34141.t1
chr1.2 CDS 75104172 75104251 75104172 ID=cds.MS.gene34141.t1;Parent=MS.gene34141.t1
chr1.2 exon 75103491 75103644 75103491 ID=MS.gene34141.t1.exon5;Parent=MS.gene34141.t1
chr1.2 CDS 75103491 75103644 75103491 ID=cds.MS.gene34141.t1;Parent=MS.gene34141.t1
chr1.2 exon 75102915 75102993 75102915 ID=MS.gene34141.t1.exon6;Parent=MS.gene34141.t1
chr1.2 CDS 75102915 75102993 75102915 ID=cds.MS.gene34141.t1;Parent=MS.gene34141.t1
chr1.2 exon 75102747 75102831 75102747 ID=MS.gene34141.t1.exon7;Parent=MS.gene34141.t1
chr1.2 CDS 75102747 75102831 75102747 ID=cds.MS.gene34141.t1;Parent=MS.gene34141.t1
chr1.2 exon 75102060 75102106 75102060 ID=MS.gene34141.t1.exon8;Parent=MS.gene34141.t1
chr1.2 CDS 75102060 75102106 75102060 ID=cds.MS.gene34141.t1;Parent=MS.gene34141.t1
chr1.2 exon 75101714 75101878 75101714 ID=MS.gene34141.t1.exon9;Parent=MS.gene34141.t1
chr1.2 CDS 75101714 75101878 75101714 ID=cds.MS.gene34141.t1;Parent=MS.gene34141.t1
Gene Sequence

>MS.gene34141

ATGTCTGGTGGAGTTGGACCAACTGGCTGTGACATTAGCCTACCAAAAGAAGAACAAGAAATTGAACACAAAGAACAACAAGACCAATCACTTAAGGATAATCTCAACAAATCAACAACCACACCACAAAGAAAAACTAGTTTCCTCTCATTCCGACAACTCAATTGTTTAGCTGTTGTTGTTGTTTTATCAGCCAGTGGCATGGTTAGCCCTGAAGATTTTGGATTTGTACTCTTTTCAGTACTCTACATGTACTTCATTTCAAAAGTTGCTTTTCCATCTCACCCTTCAAAAGAACAACCTATTTTCACTCAACAAAACAAGATCCTTAAACTTTATGTTTTCATAGGAGCAATCATTGGACTATATGCTCCTATAGCATATATTTTACATGGAATATTTGAAGGTGATAAGGAAGGTATTAAAGCAGCTACACCACATGTTTTTCTTTTGGCTAGTCAAGTTTTTATGGAAGGTGTTGCATTTTCAAATGGATTTTCTTCTCCAATAAGAGCTTTTGTTCCAGTTCTTTATAATTCAAGGAGGATTTTCACTATTGTGGATTGGTTTAGAGATGAGATTTCCAAGGTTGGTGAAGAGCATAGTGGTTCTTATAAAAGGATTTATGCTGGAAGAGCACTTGCTGTGGCTAATATGGCTTTTTGGTGCTTTAATTTGTTTGGATTTTTAATACCTGTTTATCTTCCTAGAGTTTTTAAAGCGTATTATTCAAGCCCGAAAGTAAATTAAGGAATGATTAGGTAGCTATAGGGTGTTGTTTATGTATGATTTGTATAAGGTCTTGAACCATGACTTTTCTGCTGGTTATTCTATATATTTGCATAGTAATTAAATAAATTTGACAGTGGAAATACACACATTTGTATATGGTATATGTAATATGCATACTTTGTACATTGGAATGCGTTCTTATCAGGACTTTAAGCTCCACACATCTCATCTTCAACATAGTGACATAATAACATGGACTGCGTTTTTATTTGAATGATGACATCATTGGCACTAAATAATATTAAAAAGAACTATTCAAAATCAAGCCCACCTAAATCTTATATAAAATTGATTCTATAAATAATATTCAAGTCTATAAGAATAGTATAAAGTATTGTGTTGAATTTAACCATGATCTGCACTATTGACTTTGTGAATTGTGACGGAGAAAGAGAGATTTTCCATTACCATCATGTGGCCATTTAGCAAGAAAGGGATTTCTGGATTCTCAGGGAGTTCAACTGCTGAACAAGTTACTCATGGAATTGATGCAACTGGTCTCACTGCTATTGTCACTGGTCTATCTCTATTACTCTTTCTTACCATTTTTTTTATTTTTTCATTTTTCAACCATGCCCTTTGTTGAATAGTAGTTTTATGTTGCAGAGTTATGGGGAATTATTAACCTTTATGTATGAATATATGTAGCTTTTCATCATTTAGACTTGAGGAGTGATTAACAAACTTTTTTAATGATCTTTGTAGTTGACTCTATAATTTAACTTCAAGATTATTGCTGCTGAAATTTGCATAGTCAGGATTTATTTGTTTATATTCTGTGTAATTTTACATCAAATTCTTGCAATTGGCTATGAAAAATTATTATATGGATATGATGACATGGTAACAGGAGCAACCAGTGGTATTGGAGTTGAGACTACGCGTGTTCTTGCTTTGCGTGGTGTCCATGTGATTATGGCAGTTAGAAATACAGTTGCTGCTAATGATATCAAAGCAGCAATACTTAAGGAGATTCCCTCAGCTAAAATTGACGTCATGGAGTTAGATCTCAGTTCAATGGAATCTGTCAAGAAATTTGCATCCGAATTCAACTCCTCTGGTCTTCTGTTGAACATCTTGATGTAAGAAAAGGAACCGACATGGATCGCAGTACCATCTTTATTTAGGCAAAACTGCACTAAGATTCCTCCAACTTAATTTAAAGTTTTACATGTCCATTTAAAAAGTAAATTGCATTTTCAATTCATCAAGATAACATCTAAATTACACCATAATAATTGTTATAATATCTAATTATCAAAATTAACATGATCATTTTTAGTTTTAGTCTAAGATTGTGACCTCATTGTTGTTCGAGGGTCTAATTTTGTTGTTGAGTGGTGAAAAATTCTTTATCATATATTTTTCAATGAGACAAATTTGTTACAGATGTATACTAAGAATGAAAGTTAGTTGAACAGGATAAAGATAAAAGGCTAACTTGACACAGAAAAAAAAGATAAAAGACGTGTTTGAAACTTTAAATTAAGTTAACAGACCCAGGTGCAGATTTGCCTTTTATTTGCCATTTATGTTGACTCCTGATTTTTATTGAAGTTGTTAATTACTTGTTTTCCCTCACCATGTGTGTCTGTGTTCCAGTTTATCTTTCTTGATCATGTTCATTCAAGGAAAACCAGTAGTAGTAATGTTTTCTGGTTTGTTTATTTGTAATTGCAAGAAACAATGCAGGAATCATGTCATGCCCTTTCATGCTGTCCAAAGACAACATTGAACTACAGTTTGCCACAAACCACTTAGGTATGTGGGCAATATGTTTGATTTTAAGGTCCAACCAACCGAGTTCTTTATTCATTTGATTACTAATATCGACATCACTTAAAATTTACTGATCTTTTATTCTTCTAATAAAATGAAGAGAAAAGGAGACATACACTGGAAGTGTAAATTAGTTTTACACTGACGTCCAATGAAATACCATTATTTTACAATTATTTTTAAATTACAGTTACAAAGTGTGCTTCCATGGAAACATTACGAGTTTTAATTGGAATTTGGATGTCAGGGTAAACCTATTTTACACTAATAATGCATATCCATTAAACTCTAAGATGAATTCCTATGTGGGAGCAACTGTGATGAAATGTCTTTCTTTCTGATGTAGATGATCAAGAACTCGGTGATAGTAATTGATAGCTACTGTGATAATACAGACAAATGAGACCTACTTCACTACACACACACACACACACACACACACACACACACATCAGGGGAAGAAATGTTTATGAGTCTTTGAAACATGAAACCATCATGTAATTGTGCAGGTCATTTTCTCTTAACAAATCTTTTGTTGGACACAATGAAGAAAACAGCACACCAAAGTAAGAAAGAAGGAAGAATTGTTAATGTCTCTGGAGAGGCTTACACATTTGCATATTCTGAAGGAATCCGTTTTGACAAAATTAATGACCAATCAAGGTAATAACCAATAGGTAACCTATGTTCAAATCATCACGAGATGTACTGTTATTTTGTATTTTGTTTTTAAATGGAAGAGGAAATTACTTGTGTGAGACAGAGCAATTATAATAGAGAATTTTATTCTTGGGCACTCGGCTTTACTATTGGTTTGATTATAAGAAAGAAATAGTATTCAATATGAAGTTTGTGATTATGATATGTATTTCGGTTTTCTGCGAGTCTTGGAGAAGAAGCCAGATAAAATTTTTGATACAGAAAACCTGCAGATATGATATTGATCACATGGATATAGTTTTAGTCTTGTAGACTATACCTATGCACATCTCAGTTGCAGTTAGAATTAACAATCGAGTCGTGATTCTTGTAGTACTTGTTGAAAGGAGGCGCTGTTCATATTTGATTCCATGTTTACAGTTAAAACGATTGTCTCACCATGGTTGCATGAAAAATTAAGAGTGGAAATGTGGTAAATATGTTTGCTTCCTTGTATACAGTTATAACAAACAGAGTGCATATGGACAGTCAAAGCTTGCTAACATTTTACATGCCAATGAGCTTGCAAGACGCCTCAAGGTATGCTAGTTTCTCTTTGTTTTGTGTGTAAAAGTGACTCTTTGTTTTGATATATATAACATTACTTGGTACATCTTGATCAGGATGATGGGGTGGATATCATTGTGAATTCTCTTCATCCAGGAATCATTCTCACCAATCTTTCCCGCCATATGGGTGTAATCCACGGTAACTATTATCTTGTACTATTCATCTCAATTCATGATTTGTCTAGAAATTATTAAAGCCCTGTGACATGGCATTCTAAATGATTTTTTCCTGCATTATCTATCGTGGATTTTACAATGAGACAAGCATCATTCATCTACATTACTATAGGTGTTTTATATTTCCTATTATACCCCTAATCATTTATTTACTCGTATAATTCCCTTTCTCAGACCAAGGATGAAGGTAATTTACTAAAGTAAGTCATAATATTTATAAAATCAACAAAACCAACTACGTTTCTTAATTCACGTGTCATTTTTCCTACGTTTTTTTATACTGTAGTGGATGAGATGAAGTAATGTTTGCACTTCATTGCTATACCAACTCATCTATAACGTACAACAAGATAATCATTCAGGAAGTTAAATATGTGGCAGTCTGTCCACCAACTTTCACCACTCATTCATACATTATTACTTTATTTCTGTTTATCTGATTATTTTGAATTGGGTGGTTTTTCTGGTTTGTTTGTTTGCACACTGGCACTCTACAACATTAGCACTTAGTGTCCATAAAATGTGTTTGTTTTCTAATATGCACATAATGACAGTAGCTGAGTTTTATAGATATTGCTACTTATGTTTGATTTATGCAACAGGTATAATACAGGTGATTGGGAAACTTGTGATGAAAAATGTTCAGCAGGTATGTCATAATCAGTATGACCTATGATTTATAAATGTGAGGGTCGTGTCAAATAAATATTGGTTGTTATAAACGTTTATTAAGGGACCAATAAAGAAACACAGATTAGAAGATTTCTGATATTTCACTTTTTTTAGCTTATTAATCAGTTGCATGTTAACTTTTTCCTATCTAAATGTAGGGGGCAGCAACAACATGCTATGTAGCATTGCACCCACAAGTGAAGGGAGTTAGTGGTGAGTATTTTTCAGACAATAATGTGGCCAAAAGAGAATCACAGGGAAGGGACGCTGATTTGGCCAAGAAACTTTGGGATTTCAGCATGAATTTGATTAAGGAGGAATAG
Protein sequence

>MS.gene34141.t1

MSGGVGPTGCDISLPKEEQEIEHKEQQDQSLKDNLNKSTTTPQRKTSFLSFRQLNCLAVVVVLSASGMVSPEDFGFVLFSVLYMYFISKVAFPSHPSKEQPIFTQQNKILKLYVFIGAIIGLYAPIAYILHGIFEGDKEGIKAATPHVFLLASQVFMEGVAFSNGFSSPIRAFVPVLYNSRRIFTIVDWFRDEISKVGEEHSGSYKRIYAGRALAVANMAFCKKGISGFSGSSTAEQVTHGIDATGLTAIVTGATSGIGVETTRVLALRGVHVIMAVRNTVAANDIKAAILKEIPSAKIDVMELDLSSMESVKKFASEFNSSGLLLNILINNAGIMSCPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAHQSKKEGRIVNVSGEAYTFAYSEGIRFDKINDQSSYNKQSAYGQSKLANILHANELARRLKDDGVDIIVNSLHPGIILTNLSRHMGVIHGIIQVIGKLVMKNVQQGAATTCYVALHPQVKGVSGEYFSDNNVAKRESQGRDADLAKKLWDFSMNLIKEE