AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34138

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34138.t1 MTR_1g100315 98.730 315 4 0 1 315 1 315 0.0 642
MS.gene34138.t1 MTR_1g100305 82.857 315 54 0 1 315 1 315 0.0 555
MS.gene34138.t1 MTR_1g100395 84.615 312 48 0 1 312 1 312 0.0 546
MS.gene34138.t1 MTR_1g100335 83.492 315 52 0 1 315 1 315 0.0 545
MS.gene34138.t1 MTR_8g098415 68.889 315 98 0 1 315 1 315 3.56e-162 454
MS.gene34138.t1 MTR_8g098415 69.805 308 93 0 1 308 1 308 9.06e-161 451
MS.gene34138.t1 MTR_6g053550 69.055 307 92 1 10 313 18 324 1.78e-154 435
MS.gene34138.t1 MTR_1g100335 83.740 246 40 0 1 246 1 246 9.43e-151 424
MS.gene34138.t1 MTR_1g100335 83.740 246 40 0 1 246 1 246 1.04e-150 423
MS.gene34138.t1 MTR_8g098415 68.992 258 80 0 58 315 1 258 1.04e-131 375
MS.gene34138.t1 MTR_1g068970 58.361 305 127 0 8 312 13 317 2.82e-128 369
MS.gene34138.t1 MTR_7g099850 58.170 306 127 1 8 312 13 318 1.71e-127 367
MS.gene34138.t1 MTR_6g053600 67.176 262 83 1 10 268 4 265 1.27e-123 356
MS.gene34138.t1 MTR_8g098415 74.429 219 56 0 1 219 1 219 9.77e-117 336
MS.gene34138.t1 MTR_1g068970 57.085 247 106 0 66 312 4 250 5.47e-101 297
MS.gene34138.t1 MTR_3g077410 43.910 312 171 2 8 315 13 324 1.16e-85 261
MS.gene34138.t1 MTR_8g099995 45.902 305 161 3 8 308 13 317 6.53e-85 259
MS.gene34138.t1 MTR_4g105310 43.269 312 173 2 8 315 24 335 3.39e-80 247
MS.gene34138.t1 MTR_4g105310 44.856 243 130 2 8 246 24 266 9.91e-62 197
MS.gene34138.t1 MTR_1g100345 63.514 74 27 0 33 106 4 77 1.95e-26 100
MS.gene34138.t1 MTR_6g081020 29.276 304 186 9 30 312 62 357 3.20e-26 107
MS.gene34138.t1 MTR_6g041980 28.195 266 169 5 25 285 62 310 1.75e-25 104
MS.gene34138.t1 MTR_2g079710 29.712 313 185 10 31 312 88 396 1.88e-22 97.1
MS.gene34138.t1 MTR_3g091070 28.477 302 168 11 32 312 43 317 1.81e-20 90.5
MS.gene34138.t1 MTR_6g453040 29.139 302 184 10 32 312 43 335 2.18e-19 87.8
MS.gene34138.t1 MTR_6g041980 28.866 194 131 2 25 218 62 248 9.52e-19 84.7
MS.gene34138.t1 MTR_3g009190 29.139 302 184 10 32 312 65 357 9.73e-19 85.9
MS.gene34138.t1 MTR_3g009190 29.139 302 184 10 32 312 83 375 1.38e-18 85.9
MS.gene34138.t1 MTR_3g009190 28.904 301 184 10 33 312 65 356 1.89e-16 79.3
MS.gene34138.t1 MTR_4g087460 28.512 242 139 6 32 239 24 265 3.80e-13 69.3
MS.gene34138.t1 MTR_6g453040 30.049 203 121 6 32 220 65 260 1.00e-11 65.1
MS.gene34138.t1 MTR_8g022500 35.398 113 48 2 34 146 431 518 2.74e-11 64.7
MS.gene34138.t1 MTR_6g453040 30.108 186 111 5 32 203 65 245 3.51e-11 62.8
MS.gene34138.t1 MTR_7g076660 26.280 293 152 9 32 283 9 278 9.04e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34138.t1 AT4G11410 71.111 315 91 0 1 315 1 315 4.59e-168 469
MS.gene34138.t1 AT4G23420 70.253 316 93 1 1 315 1 316 2.91e-166 465
MS.gene34138.t1 AT4G23420 70.253 316 93 1 1 315 1 316 2.91e-166 465
MS.gene34138.t1 AT4G23430 70.513 312 91 1 1 311 1 312 7.35e-166 464
MS.gene34138.t1 AT4G23420 70.323 310 91 1 3 311 20 329 6.23e-163 457
MS.gene34138.t1 AT4G23430 69.872 312 91 2 1 311 1 310 1.80e-162 455
MS.gene34138.t1 AT4G23430 67.628 312 90 2 1 311 1 302 1.13e-155 438
MS.gene34138.t1 AT4G23430 66.987 312 90 3 1 311 1 300 2.55e-152 429
MS.gene34138.t1 AT4G23420 71.374 262 74 1 1 261 1 262 8.66e-138 391
MS.gene34138.t1 AT4G23420 72.874 247 66 1 1 246 1 247 6.55e-132 376
MS.gene34138.t1 AT4G11410 73.469 245 65 0 1 245 1 245 5.11e-130 371
MS.gene34138.t1 AT2G37540 55.375 307 137 0 6 312 10 316 6.79e-125 360
MS.gene34138.t1 AT5G02540 58.958 307 126 0 6 312 10 316 6.82e-124 358
MS.gene34138.t1 AT2G37540 57.627 236 100 0 6 241 10 245 1.14e-98 291
MS.gene34138.t1 AT4G24050 46.429 308 162 2 8 312 13 320 2.05e-87 265
MS.gene34138.t1 AT5G50130 46.624 311 162 3 8 314 13 323 2.86e-85 260
MS.gene34138.t1 AT5G50130 46.454 282 150 1 34 314 8 289 5.16e-79 243
MS.gene34138.t1 AT5G50130 46.643 283 149 2 34 314 8 290 1.70e-78 241
MS.gene34138.t1 AT1G64590 46.154 299 158 2 17 312 22 320 2.78e-76 237
MS.gene34138.t1 AT4G24050 45.455 264 139 3 8 268 13 274 8.85e-71 221
MS.gene34138.t1 AT5G50130 45.660 265 140 3 8 268 13 277 1.82e-69 219
MS.gene34138.t1 AT5G50130 45.865 266 139 4 8 268 13 278 8.96e-69 217
MS.gene34138.t1 AT5G50130 49.145 234 117 1 8 239 13 246 1.96e-68 214
MS.gene34138.t1 AT5G50130 49.362 235 116 2 8 239 13 247 1.00e-67 213
MS.gene34138.t1 AT5G50130 45.570 237 127 2 34 268 8 244 1.18e-62 201
MS.gene34138.t1 AT5G50130 45.798 238 126 3 34 268 8 245 5.39e-62 199
MS.gene34138.t1 AT4G27760 32.039 309 169 9 30 312 58 351 6.73e-28 111
MS.gene34138.t1 AT5G54190 30.225 311 182 10 33 312 96 402 1.99e-27 110
MS.gene34138.t1 AT4G09750 27.632 304 194 7 4 302 20 302 2.27e-26 106
MS.gene34138.t1 AT1G03630 33.758 314 170 12 31 312 89 396 8.60e-26 106
MS.gene34138.t1 AT1G03630 33.758 314 170 12 31 312 91 398 8.97e-26 106
MS.gene34138.t1 AT5G04070 29.352 293 185 8 32 308 61 347 1.44e-23 99.8
MS.gene34138.t1 AT4G27440 30.868 311 180 10 33 312 92 398 1.63e-23 100
MS.gene34138.t1 AT4G27440 30.868 311 180 10 33 312 92 398 1.63e-23 100
MS.gene34138.t1 AT5G53100 32.026 306 176 11 30 312 45 341 1.06e-22 97.4
MS.gene34138.t1 AT5G53090 29.900 301 186 6 30 312 57 350 2.41e-22 96.3
MS.gene34138.t1 AT5G15940 27.907 301 193 10 32 314 63 357 9.66e-21 91.7
MS.gene34138.t1 AT5G15940 27.907 301 193 10 32 314 63 357 9.66e-21 91.7
MS.gene34138.t1 AT5G15940 27.907 301 193 10 32 314 62 356 1.05e-20 91.7
MS.gene34138.t1 AT5G54190 27.719 285 172 9 58 312 1 281 1.27e-19 87.4
MS.gene34138.t1 AT5G15940 27.477 222 144 5 32 240 63 280 2.99e-15 75.5
MS.gene34138.t1 AT5G51030 26.712 292 153 13 32 285 40 308 8.71e-12 65.5
MS.gene34138.t1 AT5G61830 33.333 144 83 5 32 170 39 174 3.54e-11 63.5
MS.gene34138.t1 AT5G61830 33.333 144 83 5 32 170 39 174 3.54e-11 63.5

Find 66 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGCAGGAAAGGGGTATC+TGG 0.244871 1.2:-75081396 MS.gene34138:CDS
TTGGGATTTCAGCATGAATT+TGG 0.287522 1.2:-75076122 MS.gene34138:CDS
CTCTTTAAGTATTGCTTCTC+TGG 0.294320 1.2:+75080840 None:intergenic
ACATGGTGTCCATGTGATTA+TGG 0.307075 1.2:-75080893 MS.gene34138:CDS
GATTATGGCTGTTAGAAATA+AGG 0.314737 1.2:-75080878 MS.gene34138:CDS
CTGATTTGGCTAAGAAACTT+TGG 0.324819 1.2:-75076141 MS.gene34138:CDS
ACATGGGAGGGATGCTGATT+TGG 0.329130 1.2:-75076155 MS.gene34138:CDS
TTGTATACAGTTACAGCAAA+TGG 0.345777 1.2:-75078311 MS.gene34138:intron
CACTAACTCCCTTCACTTGT+GGG 0.347652 1.2:+75076218 None:intergenic
CCTCCCATGTGAACTTGATT+TGG 0.351212 1.2:+75076168 None:intergenic
CCAACTTACAAAACATTTCA+AGG 0.364591 1.2:-75078244 MS.gene34138:intron
GGAGTTAGATCTCAGTTCAT+TGG 0.382633 1.2:-75080791 MS.gene34138:CDS
CTGTAGTTCGATGTTGTCAT+TGG 0.387818 1.2:+75080033 None:intergenic
ACGCGTGTTCTTGCTTTACA+TGG 0.389431 1.2:-75080910 MS.gene34138:CDS
TGATTTGGCTAAGAAACTTT+GGG 0.394881 1.2:-75076140 MS.gene34138:CDS
CCACTAACTCCCTTCACTTG+TGG 0.412556 1.2:+75076217 None:intergenic
TGTATACAGTTACAGCAAAT+GGG 0.425806 1.2:-75078310 MS.gene34138:intron
TACAGCAAATGGGGTGCATA+TGG 0.428773 1.2:-75078300 MS.gene34138:CDS
ACAGGAGCATCCAGTGGTAT+TGG 0.435914 1.2:-75080943 MS.gene34138:intron
GCATCCGAATTTAATTCCTC+TGG 0.439216 1.2:-75080751 MS.gene34138:CDS
CCACAAGTGAAGGGAGTTAG+TGG 0.447541 1.2:-75076217 MS.gene34138:CDS
TCTTACATCAAGATGTTCAA+TGG 0.449454 1.2:+75080724 None:intergenic
TTACATCTTGATCAGGATGA+TGG 0.452961 1.2:-75077626 MS.gene34138:intron
AAGACCAGAGGAATTAAATT+CGG 0.474997 1.2:+75080747 None:intergenic
AGATTGGTGGCAATGCCTCC+TGG 0.478554 1.2:+75077575 None:intergenic
ACAAAATTAATGAACAATCA+AGG 0.483699 1.2:-75079451 MS.gene34138:intron
TGTGGCCATTCAGCAGGAAA+GGG 0.484540 1.2:-75081404 MS.gene34138:CDS
ACTCATGGAATTGATGCAAC+TGG 0.489575 1.2:-75081342 MS.gene34138:CDS
TGCAAATTTGTGAGCTTCTG+AGG 0.489977 1.2:+75079496 None:intergenic
TCAGCAGGAAAGGGGTATCT+GGG 0.495041 1.2:-75081395 MS.gene34138:CDS
CGTTGATTGCGCTGTTATGA+CGG 0.496487 1.2:+75077549 None:intergenic
TCATCATGTGGCCATTCAGC+AGG 0.496748 1.2:-75081410 None:intergenic
CACAAATTTGCATATTCTGA+AGG 0.498869 1.2:-75079485 MS.gene34138:CDS
TTGTCATTGGAAAGCATGAA+AGG 0.519351 1.2:+75080046 None:intergenic
GATACCCCTTTCCTGCTGAA+TGG 0.522828 1.2:+75081399 None:intergenic
ATGTGGCCATTCAGCAGGAA+AGG 0.530864 1.2:-75081405 MS.gene34138:CDS
ATGTTTCACAAATACCTAAG+TGG 0.533317 1.2:+75079999 None:intergenic
ATTGCAAATTCTCTTCATCC+AGG 0.533827 1.2:-75077593 MS.gene34138:CDS
GGCCTCACTGCTATTGTCAC+TGG 0.537638 1.2:-75081321 MS.gene34138:intron
CAGTTTGCGACAAACCACTT+AGG 0.544627 1.2:-75080013 MS.gene34138:intron
AGCATTGCACCCACAAGTGA+AGG 0.549189 1.2:-75076227 MS.gene34138:CDS
GCTGTTATGACGGTAAAGAT+TGG 0.556805 1.2:+75077559 None:intergenic
CAAATCAAGTTCACATGGGA+GGG 0.557158 1.2:-75076167 MS.gene34138:CDS
GTGATTGGAAGAAACAATGC+AGG 0.557679 1.2:-75080082 MS.gene34138:intron
TTTCAGCATGAATTTGGTCA+AGG 0.566003 1.2:-75076116 MS.gene34138:CDS
AAGAAACAATGCAGGAGTCA+TGG 0.567107 1.2:-75080074 MS.gene34138:CDS
AGTCTCAACTCCAATACCAC+TGG 0.568579 1.2:+75080933 None:intergenic
ACAGCTGAAGAAGTTACTCA+TGG 0.574245 1.2:-75081357 MS.gene34138:CDS
TGCAACAGGTATAGTAAATG+TGG 0.575815 1.2:-75076481 MS.gene34138:intron
TGTCATTGGAAAGCATGAAA+GGG 0.579731 1.2:+75080047 None:intergenic
CGTCATAACAGCGCAATCAA+CGG 0.595268 1.2:-75077548 MS.gene34138:intron
GCTAGTGAAAGTAAGACTGA+AGG 0.596766 1.2:-75079536 MS.gene34138:CDS
GTTATGACGGTAAAGATTGG+TGG 0.600769 1.2:+75077562 None:intergenic
TGGGTGCAATGCTACATAGC+AGG 0.602362 1.2:+75076237 None:intergenic
GTGGCCAAATCAAGTTCACA+TGG 0.609154 1.2:-75076172 MS.gene34138:CDS
ACAGGTATAGTAAATGTGGT+TGG 0.612281 1.2:-75076477 MS.gene34138:intron
CCAAATCAAGTTCACATGGG+AGG 0.616347 1.2:-75076168 MS.gene34138:CDS
TTCTAACAGCCATAATCACA+TGG 0.621462 1.2:+75080884 None:intergenic
GCATTGCACCCACAAGTGAA+GGG 0.624705 1.2:-75076226 MS.gene34138:CDS
GTATACAGTTACAGCAAATG+GGG 0.639935 1.2:-75078309 MS.gene34138:intron
GTGGCCATTCAGCAGGAAAG+GGG 0.656505 1.2:-75081403 MS.gene34138:CDS
GATGTTCAATGGAAGACCAG+AGG 0.666537 1.2:+75080735 None:intergenic
ATGTTAACAGGAGCATCCAG+TGG 0.683391 1.2:-75080949 MS.gene34138:intron
GCAAATTCTCTTCATCCAGG+AGG 0.683556 1.2:-75077590 MS.gene34138:CDS
TGGCCAAATCAAGTTCACAT+GGG 0.718809 1.2:-75076171 MS.gene34138:CDS
TACCAGTGACAATAGCAGTG+AGG 0.758013 1.2:+75081319 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGAAAAATAAACAAAA+AGG + chr1.2:75076246-75076265 None:intergenic 10.0%
!! AAATGAAAAATAAACAAAAA+GGG + chr1.2:75076245-75076264 None:intergenic 10.0%
!! ATCTAATAATATTATGATTA+AGG - chr1.2:75080266-75080285 MS.gene34138:intron 10.0%
!! CAAAATAAATAGTAAATAAA+AGG + chr1.2:75077286-75077305 None:intergenic 10.0%
!! TTAATCATAATATTATTAGA+TGG + chr1.2:75080267-75080286 None:intergenic 10.0%
!!! TCTTATTATCAATTTTATTT+AGG - chr1.2:75076829-75076848 MS.gene34138:intron 10.0%
!! AATAATAAATATCATGTAAG+TGG + chr1.2:75078956-75078975 None:intergenic 15.0%
!! AATAATATTATGATTAAGGT+TGG - chr1.2:75080270-75080289 MS.gene34138:intron 15.0%
!! ACATGATATTTATTATTGTT+TGG - chr1.2:75078959-75078978 MS.gene34138:intron 15.0%
!! ATAAAACTAATATTGTAGTA+TGG + chr1.2:75080460-75080479 None:intergenic 15.0%
!! ATAAAGTAATAATGTATGAA+TGG + chr1.2:75080820-75080839 None:intergenic 15.0%
!! ATTATAGTATTATACTATTC+AGG - chr1.2:75079993-75080012 MS.gene34138:intron 15.0%
!! TAAATCAAAGATAATTAATG+TGG + chr1.2:75079855-75079874 None:intergenic 15.0%
!! TAATTATTATATGGATATGA+TGG - chr1.2:75076540-75076559 MS.gene34138:intron 15.0%
!! TATAGATTAAAAACGAAATT+TGG + chr1.2:75076970-75076989 None:intergenic 15.0%
!!! AAACTTCAATTTTATTTTCT+TGG - chr1.2:75078182-75078201 MS.gene34138:intron 15.0%
!!! AAAGATCATTTTAAATTTGA+TGG + chr1.2:75077047-75077066 None:intergenic 15.0%
!!! AACTTCAATTTTATTTTCTT+GGG - chr1.2:75078183-75078202 MS.gene34138:intron 15.0%
!!! AAGATCATTTTAAATTTGAT+GGG + chr1.2:75077046-75077065 None:intergenic 15.0%
!!! AGACTTTTTTTTTTTTATCA+AGG - chr1.2:75080323-75080342 MS.gene34138:intron 15.0%
!!! GTAAACATTTTTAAAGATAA+TGG - chr1.2:75077217-75077236 MS.gene34138:intron 15.0%
!!! TTTAATTTTAAGTTTCAAAC+AGG - chr1.2:75076878-75076897 MS.gene34138:intron 15.0%
!!! TTTATTGTTGTTATACATTA+TGG + chr1.2:75080748-75080767 None:intergenic 15.0%
!! AAAAACTACTATTGAACAAA+AGG + chr1.2:75076279-75076298 None:intergenic 20.0%
!! AAAACTACTATTGAACAAAA+GGG + chr1.2:75076278-75076297 None:intergenic 20.0%
!! ACAAAATTAATGAACAATCA+AGG - chr1.2:75078062-75078081 MS.gene34138:intron 20.0%
!! ATCATAATATTATTAGATGG+TGG + chr1.2:75080264-75080283 None:intergenic 20.0%
!! CAAATAAAATAGTTAGACTT+AGG + chr1.2:75080497-75080516 None:intergenic 20.0%
!! GGCTATGATTAATTATTATA+TGG - chr1.2:75076531-75076550 MS.gene34138:intron 20.0%
!! TCAGACATAAATAAATCTAA+TGG + chr1.2:75077719-75077738 None:intergenic 20.0%
!! TCATAATATTATTAGATGGT+GGG + chr1.2:75080263-75080282 None:intergenic 20.0%
!! TGTCAAAAAAATAAAACGTA+TGG + chr1.2:75080596-75080615 None:intergenic 20.0%
!! TTTATGTAATATAATTCCAC+AGG - chr1.2:75077908-75077927 MS.gene34138:intron 20.0%
!! TTTCTTATACTATTAGTGAA+GGG - chr1.2:75080553-75080572 MS.gene34138:intron 20.0%
!!! AAAGTTTTTAAAAATGGAAG+AGG - chr1.2:75078122-75078141 MS.gene34138:intron 20.0%
!!! ACTTGTCGTAAATTTTTTTT+TGG - chr1.2:75080144-75080163 MS.gene34138:intron 20.0%
!!! ATACATTGATGATTTTGAAT+TGG - chr1.2:75080883-75080902 MS.gene34138:CDS 20.0%
!!! ATATTTTTCAGACAATAATG+TGG - chr1.2:75081322-75081341 MS.gene34138:CDS 20.0%
!!! GAAAAAGCAAACAAATTTTA+TGG + chr1.2:75080955-75080974 None:intergenic 20.0%
!!! GATGAAGAATATATTTGTTA+AGG + chr1.2:75078569-75078588 None:intergenic 20.0%
!!! GTTCATTAATTTTGTCAAAA+CGG + chr1.2:75078057-75078076 None:intergenic 20.0%
!!! TACATTGATGATTTTGAATT+GGG - chr1.2:75080884-75080903 MS.gene34138:CDS 20.0%
!!! TGAATTTTTCAATATTCAGA+GGG + chr1.2:75080304-75080323 None:intergenic 20.0%
!!! TGTTGATTTTATAAAACGTA+CGG + chr1.2:75080624-75080643 None:intergenic 20.0%
!!! TTTTATGTTGCTAAGTTATT+GGG - chr1.2:75076304-75076323 MS.gene34138:intron 20.0%
! AAACTAATATTGTAGTATGG+AGG + chr1.2:75080457-75080476 None:intergenic 25.0%
! AACTAATATTGTAGTATGGA+GGG + chr1.2:75080456-75080475 None:intergenic 25.0%
! AACTGTTTCAATTGTAAACA+AGG + chr1.2:75079082-75079101 None:intergenic 25.0%
! AATAAATATCATGTAAGTGG+TGG + chr1.2:75078953-75078972 None:intergenic 25.0%
! ACCTACTATTTATAAATGTG+AGG - chr1.2:75081106-75081125 MS.gene34138:intron 25.0%
! AGCTAAGAAAAGTGAAATAT+CGG + chr1.2:75081200-75081219 None:intergenic 25.0%
! AGCTGATGTTTAACAATATT+TGG + chr1.2:75079654-75079673 None:intergenic 25.0%
! AGTAATAATGTATGAATGGT+TGG + chr1.2:75080816-75080835 None:intergenic 25.0%
! AGTAATTTATAGCACTTGAT+TGG - chr1.2:75080709-75080728 MS.gene34138:intron 25.0%
! CAATATCATGTACCAAATAT+AGG + chr1.2:75080233-75080252 None:intergenic 25.0%
! CATTCATGAATATAACATAG+TGG - chr1.2:75078834-75078853 MS.gene34138:intron 25.0%
! CCTACTATTTATAAATGTGA+GGG - chr1.2:75081107-75081126 MS.gene34138:intron 25.0%
! CTACTATTTATAAATGTGAG+GGG - chr1.2:75081108-75081127 MS.gene34138:intron 25.0%
! CTTTCTTATACTATTAGTGA+AGG - chr1.2:75080552-75080571 MS.gene34138:intron 25.0%
! GGAAGCAAACATAATTAAAT+TGG + chr1.2:75079181-75079200 None:intergenic 25.0%
! GTAATAATGTATGAATGGTT+GGG + chr1.2:75080815-75080834 None:intergenic 25.0%
! GTGTGAAAGAGTAATTATAA+CGG - chr1.2:75078159-75078178 MS.gene34138:intron 25.0%
! TAACAACTTTAATAGAAACC+AGG + chr1.2:75077312-75077331 None:intergenic 25.0%
! TAATAATGTATGAATGGTTG+GGG + chr1.2:75080814-75080833 None:intergenic 25.0%
! TAATGAACAATCAAGGTAAT+AGG - chr1.2:75078069-75078088 MS.gene34138:intron 25.0%
! TATCTTAATCTCCTATCAAT+TGG - chr1.2:75079596-75079615 MS.gene34138:intron 25.0%
! TTAAAAACGTCAACAATGTT+TGG - chr1.2:75076944-75076963 MS.gene34138:intron 25.0%
! TTACAAAACATTTCAAGGTA+TGG - chr1.2:75079274-75079293 MS.gene34138:intron 25.0%
! TTGTTTACAATTGAAACAGT+TGG - chr1.2:75079081-75079100 MS.gene34138:intron 25.0%
! TTTAAAAGAGACATTTCAAG+AGG + chr1.2:75078927-75078946 None:intergenic 25.0%
!! AATTGATTTCCTGTTGAAAT+TGG - chr1.2:75076443-75076462 MS.gene34138:intron 25.0%
!! ACAGAATGTTTCTATGATTA+TGG + chr1.2:75079796-75079815 None:intergenic 25.0%
!! CTTTTATGTTGCTAAGTTAT+TGG - chr1.2:75076303-75076322 MS.gene34138:intron 25.0%
!! GTTTTACATCAAAGATTCAT+GGG + chr1.2:75078464-75078483 None:intergenic 25.0%
!! TAGGTGTTTTATCCTATATT+TGG - chr1.2:75080218-75080237 MS.gene34138:intron 25.0%
!! TGTTTTACATCAAAGATTCA+TGG + chr1.2:75078465-75078484 None:intergenic 25.0%
!! TTATTTGTTACATCTTGATC+AGG - chr1.2:75079880-75079899 MS.gene34138:intron 25.0%
!!! AATTTTTCAATATTCAGAGG+GGG + chr1.2:75080302-75080321 None:intergenic 25.0%
!!! CAGGAAATCAATTTTAGTTT+TGG + chr1.2:75076436-75076455 None:intergenic 25.0%
!!! CTGAATTTTTCAATATTCAG+AGG + chr1.2:75080305-75080324 None:intergenic 25.0%
!!! CTTTTAAGCTTTAACATCAT+CGG - chr1.2:75080379-75080398 MS.gene34138:intron 25.0%
!!! GAATTTTTCAATATTCAGAG+GGG + chr1.2:75080303-75080322 None:intergenic 25.0%
!!! GTGCTGAAAGTTTTTAAAAA+TGG - chr1.2:75078116-75078135 MS.gene34138:intron 25.0%
!!! TGTCGTAAATTTTTTTTTGG+TGG - chr1.2:75080147-75080166 MS.gene34138:intron 25.0%
!!! TTACTATTTATTTTGACTCC+TGG - chr1.2:75077291-75077310 MS.gene34138:intron 25.0%
AAAACTAGTCACCAATTGAT+AGG + chr1.2:75079610-75079629 None:intergenic 30.0%
AAGACCAGAGGAATTAAATT+CGG + chr1.2:75076769-75076788 None:intergenic 30.0%
ACACAGAGATTTATGTGAAT+TGG - chr1.2:75078516-75078535 MS.gene34138:intron 30.0%
ACTTTCTCCTATCTAAATGT+AGG - chr1.2:75081241-75081260 MS.gene34138:intron 30.0%
AGAAAGATAGTGTCACATAA+CGG + chr1.2:75080082-75080101 None:intergenic 30.0%
AGGGTAAGAAAGAGTAATAA+AGG + chr1.2:75076226-75076245 None:intergenic 30.0%
AGTGATATACATATTGAGCT+CGG + chr1.2:75078618-75078637 None:intergenic 30.0%
ATCAGCAAAAATAGATGTCA+TGG - chr1.2:75076701-75076720 MS.gene34138:intron 30.0%
ATGTTTCACAAATACCTAAG+TGG + chr1.2:75077517-75077536 None:intergenic 30.0%
ATTATACAAGTCCTTTGATG+TGG - chr1.2:75080026-75080045 MS.gene34138:CDS 30.0%
CACAAATTTGCATATTCTGA+AGG - chr1.2:75078028-75078047 MS.gene34138:intron 30.0%
CATAAAAGACTAACTTTCAG+TGG + chr1.2:75076923-75076942 None:intergenic 30.0%
CCAACTTACAAAACATTTCA+AGG - chr1.2:75079269-75079288 MS.gene34138:intron 30.0%
CCCTCACATTTATAAATAGT+AGG + chr1.2:75081110-75081129 None:intergenic 30.0%
CGATGATGTTAAAGCTTAAA+AGG + chr1.2:75080381-75080400 None:intergenic 30.0%
CTGATCTGTTTATTTGTGAT+TGG - chr1.2:75077416-75077435 MS.gene34138:intron 30.0%
CTTTCTCCTATCTAAATGTA+GGG - chr1.2:75081242-75081261 MS.gene34138:intron 30.0%
GATTATGGCTGTTAGAAATA+AGG - chr1.2:75076635-75076654 MS.gene34138:intron 30.0%
GGGTCATGTCAAATAAATAT+CGG - chr1.2:75081128-75081147 MS.gene34138:intron 30.0%
GTTATACATTATGGATGAGT+TGG + chr1.2:75080739-75080758 None:intergenic 30.0%
TATTTAGGCAAAACTGCATT+GGG - chr1.2:75076844-75076863 MS.gene34138:intron 30.0%
TCTCTCATTATTTCAACTTC+TGG - chr1.2:75079374-75079393 MS.gene34138:intron 30.0%
TCTTACATCAAGATGTTCAA+TGG + chr1.2:75076792-75076811 None:intergenic 30.0%
TGTATACAGTTACAGCAAAT+GGG - chr1.2:75079203-75079222 MS.gene34138:intron 30.0%
TGTTTACTTCTACTATGTAG+TGG - chr1.2:75079299-75079318 MS.gene34138:intron 30.0%
TTAAAGATCATGATCAGTAC+TGG + chr1.2:75077370-75077389 None:intergenic 30.0%
TTATGTGACACTATCTTTCT+TGG - chr1.2:75080082-75080101 MS.gene34138:intron 30.0%
TTATTTAGGCAAAACTGCAT+TGG - chr1.2:75076843-75076862 MS.gene34138:intron 30.0%
TTCATCATGGATACATAGTT+AGG - chr1.2:75076349-75076368 MS.gene34138:intron 30.0%
TTGTATACAGTTACAGCAAA+TGG - chr1.2:75079202-75079221 MS.gene34138:intron 30.0%
TTTCTCCTATCTAAATGTAG+GGG - chr1.2:75081243-75081262 MS.gene34138:intron 30.0%
TTTCTGTAGTATTTGTCAAC+TGG - chr1.2:75079143-75079162 MS.gene34138:intron 30.0%
! AAATCTGCATATTTCTACTG+TGG - chr1.2:75079447-75079466 MS.gene34138:intron 30.0%
! CCTTGAAATGTTTTGTAAGT+TGG + chr1.2:75079272-75079291 None:intergenic 30.0%
! GCAAACAAATTTTATGGACA+CGG + chr1.2:75080949-75080968 None:intergenic 30.0%
! GTACTGATCATGATCTTTAA+TGG - chr1.2:75077370-75077389 MS.gene34138:intron 30.0%
! GTTAGACTTAGGAGTATAAT+AGG + chr1.2:75080486-75080505 None:intergenic 30.0%
! TCTCTTGACAAATCTTTTGT+TGG - chr1.2:75077937-75077956 MS.gene34138:intron 30.0%
! TGACAAAGTATCTAACTTCT+GGG + chr1.2:75080776-75080795 None:intergenic 30.0%
! TGATGTTTGATTTATGCAAC+AGG - chr1.2:75081018-75081037 MS.gene34138:intron 30.0%
! TGATTTGGCTAAGAAACTTT+GGG - chr1.2:75081373-75081392 MS.gene34138:CDS 30.0%
! TTGACAAAGTATCTAACTTC+TGG + chr1.2:75080777-75080796 None:intergenic 30.0%
! TTGTTAAACATCAGCTTTAG+TGG - chr1.2:75079658-75079677 MS.gene34138:intron 30.0%
! TTTGCTGTAACTGTATACAA+AGG + chr1.2:75079202-75079221 None:intergenic 30.0%
!! ATTGATGATTTTGAATTGGG+TGG - chr1.2:75080887-75080906 MS.gene34138:CDS 30.0%
!! ATTTTTCAATATTCAGAGGG+GGG + chr1.2:75080301-75080320 None:intergenic 30.0%
!! CTATTGGTTTGATTCTGAAA+AGG - chr1.2:75078218-75078237 MS.gene34138:intron 30.0%
!! TAATGATTTTGACATACCTG+TGG + chr1.2:75081084-75081103 None:intergenic 30.0%
!!! ATGACATCTATTTTTGCTGA+TGG + chr1.2:75076702-75076721 None:intergenic 30.0%
!!! TCTTGGTTGCTTCATTTTTT+TGG - chr1.2:75080099-75080118 MS.gene34138:intron 30.0%
AAAAGCAAAATCGTATCAGC+AGG + chr1.2:75078334-75078353 None:intergenic 35.0%
AATGTGGCAAAACCATCAAA+AGG + chr1.2:75079839-75079858 None:intergenic 35.0%
ACAAGTCACAGTAGTTTCTA+GGG - chr1.2:75077685-75077704 MS.gene34138:intron 35.0%
ACAGGTATAGTAAATGTGGT+TGG - chr1.2:75081036-75081055 MS.gene34138:intron 35.0%
AGATAGCAGATGCTGTAAAA+AGG + chr1.2:75079581-75079600 None:intergenic 35.0%
AGTCAAGCTACTTGAAAATG+TGG + chr1.2:75078871-75078890 None:intergenic 35.0%
ATAAAAGGCAAAACTGCATC+AGG + chr1.2:75077271-75077290 None:intergenic 35.0%
ATCTTTCCGTGAAAATTGTG+AGG - chr1.2:75077643-75077662 MS.gene34138:intron 35.0%
ATGTGGCAAAACCATCAAAA+GGG + chr1.2:75079838-75079857 None:intergenic 35.0%
ATTGCAAATTCTCTTCATCC+AGG - chr1.2:75079920-75079939 MS.gene34138:intron 35.0%
ATTTCTTGCAACTCTTGAGT+GGG + chr1.2:75078651-75078670 None:intergenic 35.0%
CATGATGAAAAGCTAGTACA+AGG + chr1.2:75076338-75076357 None:intergenic 35.0%
CTACATCAAATTCATGCAAC+TGG - chr1.2:75076510-75076529 MS.gene34138:intron 35.0%
CTGTCTCAACTTATATAGCT+GGG - chr1.2:75077869-75077888 MS.gene34138:intron 35.0%
CTTGATGTAAGAAGAGAAAG+TGG - chr1.2:75076800-75076819 MS.gene34138:intron 35.0%
GAATTTGGTCAAGGACAAAT+AGG - chr1.2:75081406-75081425 MS.gene34138:CDS 35.0%
GCTAAAGTGACTAATACTGA+AGG - chr1.2:75080678-75080697 MS.gene34138:intron 35.0%
GGATATGATGGTATGTTAAC+AGG - chr1.2:75076552-75076571 MS.gene34138:intron 35.0%
GTATACAGTTACAGCAAATG+GGG - chr1.2:75079204-75079223 MS.gene34138:intron 35.0%
GTCAAGCTACTTGAAAATGT+GGG + chr1.2:75078870-75078889 None:intergenic 35.0%
GTTGCATGAAGAATTAAGAG+TGG - chr1.2:75079113-75079132 MS.gene34138:intron 35.0%
TAAAAGGCAAAACTGCATCA+GGG + chr1.2:75077270-75077289 None:intergenic 35.0%
TACTGGAACATAGACATTCA+TGG + chr1.2:75077353-75077372 None:intergenic 35.0%
TATGATTATGGTTGCCCAAA+GGG + chr1.2:75079784-75079803 None:intergenic 35.0%
TCAGAAAACAACACTACTAC+TGG + chr1.2:75077400-75077419 None:intergenic 35.0%
TCTGTCTCAACTTATATAGC+TGG - chr1.2:75077868-75077887 MS.gene34138:intron 35.0%
TCTTTCCGTGAAAATTGTGA+GGG - chr1.2:75077644-75077663 MS.gene34138:intron 35.0%
TGCAACAGGTATAGTAAATG+TGG - chr1.2:75081032-75081051 MS.gene34138:intron 35.0%
TGGGCAATCAATGTTACTAT+TGG - chr1.2:75078202-75078221 MS.gene34138:intron 35.0%
TTACATCTTGATCAGGATGA+TGG - chr1.2:75079887-75079906 MS.gene34138:intron 35.0%
TTCTAACAGCCATAATCACA+TGG + chr1.2:75076632-75076651 None:intergenic 35.0%
TTCTCCTATCTAAATGTAGG+GGG - chr1.2:75081244-75081263 MS.gene34138:intron 35.0%
TTGCATGAATTTGATGTAGC+AGG + chr1.2:75076509-75076528 None:intergenic 35.0%
TTGGGATTTCAGCATGAATT+TGG - chr1.2:75081391-75081410 MS.gene34138:CDS 35.0%
TTTCAGCATGAATTTGGTCA+AGG - chr1.2:75081397-75081416 MS.gene34138:CDS 35.0%
! AAAGCTTAAAAGGTTGATCG+CGG + chr1.2:75080371-75080390 None:intergenic 35.0%
! CATTTAGAATGCCACATCAA+AGG + chr1.2:75080040-75080059 None:intergenic 35.0%
! CTCTTTAAGTATTGCTTCTC+TGG + chr1.2:75076676-75076695 None:intergenic 35.0%
! GTAGTACTTGTTGAAAGAAG+AGG - chr1.2:75079028-75079047 MS.gene34138:intron 35.0%
! GTGTGATCATTTTATGTGTG+AGG + chr1.2:75078699-75078718 None:intergenic 35.0%
! TATTTGTTAAGGTGCTTCCA+TGG + chr1.2:75078558-75078577 None:intergenic 35.0%
! TGTCATTGGAAAGCATGAAA+GGG + chr1.2:75077469-75077488 None:intergenic 35.0%
! TTGTCATTGGAAAGCATGAA+AGG + chr1.2:75077470-75077489 None:intergenic 35.0%
! TTTACAGTGTTGAACCAACT+TGG + chr1.2:75077202-75077221 None:intergenic 35.0%
! TTTGAATTGGGTGGTTTTTC+TGG - chr1.2:75080896-75080915 MS.gene34138:CDS 35.0%
!! CTGATTTGGCTAAGAAACTT+TGG - chr1.2:75081372-75081391 MS.gene34138:CDS 35.0%
!! TTTTTCAGAGACCTGAATGA+AGG + chr1.2:75079745-75079764 None:intergenic 35.0%
!!! CTTGTACTAGCTTTTCATCA+TGG - chr1.2:75076336-75076355 MS.gene34138:intron 35.0%
!!! TTTTAGTTTGCTGTGAGTCT+AGG - chr1.2:75078274-75078293 MS.gene34138:CDS 35.0%
AAAAGGCAAAACTGCATCAG+GGG + chr1.2:75077269-75077288 None:intergenic 40.0%
AACACCTAGAGCAATGTAGA+TGG + chr1.2:75080206-75080225 None:intergenic 40.0%
AACCTTGATCATGTGAAGAG+TGG + chr1.2:75078759-75078778 None:intergenic 40.0%
AACTAAAGCCTGTTCCAACT+AGG + chr1.2:75079713-75079732 None:intergenic 40.0%
AAGAAACAATGCAGGAGTCA+TGG - chr1.2:75077439-75077458 MS.gene34138:intron 40.0%
ACAGCTGAAGAAGTTACTCA+TGG - chr1.2:75076156-75076175 MS.gene34138:CDS 40.0%
ACATGGTGTCCATGTGATTA+TGG - chr1.2:75076620-75076639 MS.gene34138:intron 40.0%
ACTCATGGAATTGATGCAAC+TGG - chr1.2:75076171-75076190 MS.gene34138:CDS 40.0%
ACTCTTCACATGATCAAGGT+TGG - chr1.2:75078758-75078777 MS.gene34138:intron 40.0%
AGTGAACTAAGACTCCAAGT+TGG - chr1.2:75077185-75077204 MS.gene34138:intron 40.0%
ATCAAAGATTCATGGGTGTG+TGG + chr1.2:75078457-75078476 None:intergenic 40.0%
ATCCACTCTTCACATGATCA+AGG - chr1.2:75078754-75078773 MS.gene34138:intron 40.0%
CAAATCAAGTTCACATGGGA+GGG - chr1.2:75081346-75081365 MS.gene34138:CDS 40.0%
CACAAGTCACAGTAGTTTCT+AGG - chr1.2:75077684-75077703 MS.gene34138:intron 40.0%
CATGTGAAGAGTGGATGTAT+TGG + chr1.2:75078750-75078769 None:intergenic 40.0%
CATTTCTTGCAACTCTTGAG+TGG + chr1.2:75078652-75078671 None:intergenic 40.0%
CTATGATTATGGTTGCCCAA+AGG + chr1.2:75079785-75079804 None:intergenic 40.0%
CTCTTCACATGATCAAGGTT+GGG - chr1.2:75078759-75078778 MS.gene34138:intron 40.0%
CTGACTATGCCAATTTCAAC+AGG + chr1.2:75076455-75076474 None:intergenic 40.0%
CTGTAGTTCGATGTTGTCAT+TGG + chr1.2:75077483-75077502 None:intergenic 40.0%
CTGTTGAAATTGGCATAGTC+AGG - chr1.2:75076453-75076472 MS.gene34138:CDS 40.0%
GCATCCGAATTTAATTCCTC+TGG - chr1.2:75076762-75076781 MS.gene34138:intron 40.0%
GCTAGTGAAAGTAAGACTGA+AGG - chr1.2:75077977-75077996 MS.gene34138:intron 40.0%
GCTGTTATGACGGTAAAGAT+TGG + chr1.2:75079957-75079976 None:intergenic 40.0%
GGAGTTAGATCTCAGTTCAT+TGG - chr1.2:75076722-75076741 MS.gene34138:intron 40.0%
GTGATTGGAAGAAACAATGC+AGG - chr1.2:75077431-75077450 MS.gene34138:intron 40.0%
GTTATGACGGTAAAGATTGG+TGG + chr1.2:75079954-75079973 None:intergenic 40.0%
TCAGACGCAGTTAGAATTGT+TGG - chr1.2:75078403-75078422 MS.gene34138:intron 40.0%
TCATCCATCTACATTGCTCT+AGG - chr1.2:75080199-75080218 MS.gene34138:intron 40.0%
TCATCCCGTCCTGTAAATAA+GGG + chr1.2:75078808-75078827 None:intergenic 40.0%
TCTGCAATGTGAACTGTGAA+TGG - chr1.2:75079483-75079502 MS.gene34138:CDS 40.0%
TCTTCACATGATCAAGGTTG+GGG - chr1.2:75078760-75078779 MS.gene34138:intron 40.0%
TGCAAATTTGTGAGCTTCTG+AGG + chr1.2:75078020-75078039 None:intergenic 40.0%
TGGATACATAGTTAGGCTTG+AGG - chr1.2:75076356-75076375 MS.gene34138:intron 40.0%
TGGCCAAATCAAGTTCACAT+GGG - chr1.2:75081342-75081361 MS.gene34138:CDS 40.0%
TGTAAGAAGAGAAAGTGGCA+TGG - chr1.2:75076805-75076824 MS.gene34138:intron 40.0%
TGTCAAGAGAAAATGACCTG+TGG + chr1.2:75077927-75077946 None:intergenic 40.0%
TGTGATGAAAAACGTTCCAC+AGG - chr1.2:75081065-75081084 MS.gene34138:intron 40.0%
TGTTGTCAATGAGGGTCTAA+TGG - chr1.2:75077094-75077113 MS.gene34138:intron 40.0%
TTAGACCCTCATTGACAACA+AGG + chr1.2:75077094-75077113 None:intergenic 40.0%
! ACGCAAATTTTGCATCCCTT+TGG - chr1.2:75079766-75079785 MS.gene34138:intron 40.0%
! CGCAAATTTTGCATCCCTTT+GGG - chr1.2:75079767-75079786 MS.gene34138:intron 40.0%
! TTGGAACAGGCTTTAGTTGT+TGG - chr1.2:75079715-75079734 MS.gene34138:intron 40.0%
! TTGTTGGTGTTCCTTCATTC+AGG - chr1.2:75079731-75079750 MS.gene34138:intron 40.0%
!! ACATTCCTCTCTCTAAGACA+TGG - chr1.2:75078721-75078740 MS.gene34138:intron 40.0%
!! TGGTTTGTTTGTTTGCACAC+TGG - chr1.2:75080916-75080935 MS.gene34138:CDS 40.0%
!! TGTAGCCTTGTTGTCAATGA+GGG - chr1.2:75077086-75077105 MS.gene34138:intron 40.0%
!! TTGTAGCCTTGTTGTCAATG+AGG - chr1.2:75077085-75077104 MS.gene34138:intron 40.0%
ACGCGTGTTCTTGCTTTACA+TGG - chr1.2:75076603-75076622 MS.gene34138:intron 45.0%
AGTCTCAACTCCAATACCAC+TGG + chr1.2:75076583-75076602 None:intergenic 45.0%
CAATTCTAACTGCGTCTGAG+TGG + chr1.2:75078402-75078421 None:intergenic 45.0%
CACTAACTCCCTTCACTTGT+GGG + chr1.2:75081298-75081317 None:intergenic 45.0%
CAGTTTGCGACAAACCACTT+AGG - chr1.2:75077500-75077519 MS.gene34138:intron 45.0%
CATCCCGTCCTGTAAATAAG+GGG + chr1.2:75078807-75078826 None:intergenic 45.0%
CCAAATCAAGTTCACATGGG+AGG - chr1.2:75081345-75081364 MS.gene34138:CDS 45.0%
CCTCCCATGTGAACTTGATT+TGG + chr1.2:75081348-75081367 None:intergenic 45.0%
CGTCATAACAGCGCAATCAA+CGG - chr1.2:75079965-75079984 MS.gene34138:intron 45.0%
CTCATCCCGTCCTGTAAATA+AGG + chr1.2:75078809-75078828 None:intergenic 45.0%
GAATGGTTGGGGAAGAATAG+TGG + chr1.2:75080803-75080822 None:intergenic 45.0%
GATGTTCAATGGAAGACCAG+AGG + chr1.2:75076781-75076800 None:intergenic 45.0%
GCAAATTCTCTTCATCCAGG+AGG - chr1.2:75079923-75079942 MS.gene34138:intron 45.0%
GGCAAAACCATCAAAAGGGA+GGG + chr1.2:75079834-75079853 None:intergenic 45.0%
GTGGCCAAATCAAGTTCACA+TGG - chr1.2:75081341-75081360 MS.gene34138:CDS 45.0%
TAAAGCCTGTTCCAACTAGG+TGG + chr1.2:75079710-75079729 None:intergenic 45.0%
TACAAGAGCAACTCCAGTGT+TGG + chr1.2:75079011-75079030 None:intergenic 45.0%
TACAGCAAATGGGGTGCATA+TGG - chr1.2:75079213-75079232 MS.gene34138:intron 45.0%
TACCAGTGACAATAGCAGTG+AGG + chr1.2:75076197-75076216 None:intergenic 45.0%
TCCGTGAAAATTGTGAGGGT+GGG - chr1.2:75077648-75077667 MS.gene34138:intron 45.0%
TCTCAGACTCTCAGTGATCA+CGG + chr1.2:75080416-75080435 None:intergenic 45.0%
TGGCAAAACCATCAAAAGGG+AGG + chr1.2:75079835-75079854 None:intergenic 45.0%
TTCCGTGAAAATTGTGAGGG+TGG - chr1.2:75077647-75077666 MS.gene34138:intron 45.0%
TTCGCAACTAGAACCAACAC+TGG - chr1.2:75078995-75079014 MS.gene34138:intron 45.0%
! AGGTCCCCTTATTTACAGGA+CGG - chr1.2:75078800-75078819 MS.gene34138:intron 45.0%
! CAGTAGTTTCTAGGGAGTGA+AGG - chr1.2:75077693-75077712 MS.gene34138:intron 45.0%
! CGTTGATTGCGCTGTTATGA+CGG + chr1.2:75079967-75079986 None:intergenic 45.0%
! GGGATGCTTCAACTTTTCAC+AGG - chr1.2:75078780-75078799 MS.gene34138:intron 45.0%
! TAAGGTGCTTCCATGGATGT+AGG + chr1.2:75078551-75078570 None:intergenic 45.0%
! TCACAGGTCCCCTTATTTAC+AGG - chr1.2:75078796-75078815 MS.gene34138:intron 45.0%
!! ATGTTAACAGGAGCATCCAG+TGG - chr1.2:75076564-75076583 MS.gene34138:intron 45.0%
!!! AAGGGGTATCTGGGTTTTCA+TGG - chr1.2:75076127-75076146 MS.gene34138:CDS 45.0%
ACTAGGTGGAGTTGGAATGG+AGG + chr1.2:75079696-75079715 None:intergenic 50.0%
AGCATTGCACCCACAAGTGA+AGG - chr1.2:75081286-75081305 MS.gene34138:intron 50.0%
AGCCGTATGACGTGTGTGTT+TGG + chr1.2:75077796-75077815 None:intergenic 50.0%
ATGTGGCCATTCAGCAGGAA+AGG - chr1.2:75076108-75076127 MS.gene34138:CDS 50.0%
ATTGTGAGGGTGGGGAACTT+TGG - chr1.2:75077657-75077676 MS.gene34138:intron 50.0%
CAACTCCACCTAGTTGGAAC+AGG - chr1.2:75079702-75079721 MS.gene34138:intron 50.0%
CCAACTAGGTGGAGTTGGAA+TGG + chr1.2:75079699-75079718 None:intergenic 50.0%
CCACAAGTGAAGGGAGTTAG+TGG - chr1.2:75081296-75081315 MS.gene34138:intron 50.0%
CCACTAACTCCCTTCACTTG+TGG + chr1.2:75081299-75081318 None:intergenic 50.0%
CCATTCCAACTCCACCTAGT+TGG - chr1.2:75079696-75079715 MS.gene34138:intron 50.0%
CCGTGAAAATTGTGAGGGTG+GGG - chr1.2:75077649-75077668 MS.gene34138:intron 50.0%
CGCCAAACACACACGTCATA+CGG - chr1.2:75077791-75077810 MS.gene34138:intron 50.0%
CGTATGACGTGTGTGTTTGG+CGG + chr1.2:75077793-75077812 None:intergenic 50.0%
CTAGGTGGAGTTGGAATGGA+GGG + chr1.2:75079695-75079714 None:intergenic 50.0%
CTGTTCCAACTAGGTGGAGT+TGG + chr1.2:75079704-75079723 None:intergenic 50.0%
CTTCCATGGATGTAGGCAAG+AGG + chr1.2:75078544-75078563 None:intergenic 50.0%
GATACCCCTTTCCTGCTGAA+TGG + chr1.2:75076117-75076136 None:intergenic 50.0%
GCATTGCACCCACAAGTGAA+GGG - chr1.2:75081287-75081306 MS.gene34138:intron 50.0%
GCTGCCCCCTACATTTAGAT+AGG + chr1.2:75081251-75081270 None:intergenic 50.0%
GGCAACCATGTCTTAGAGAG+AGG + chr1.2:75078729-75078748 None:intergenic 50.0%
GGGTGTGTGGCTAACTTTGA+TGG + chr1.2:75078444-75078463 None:intergenic 50.0%
GTATGACGTGTGTGTTTGGC+GGG + chr1.2:75077792-75077811 None:intergenic 50.0%
TAGGTGGAGTTGGAATGGAG+GGG + chr1.2:75079694-75079713 None:intergenic 50.0%
TATGACGTGTGTGTTTGGCG+GGG + chr1.2:75077791-75077810 None:intergenic 50.0%
TGGGTGCAATGCTACATAGC+AGG + chr1.2:75081279-75081298 None:intergenic 50.0%
TGTGGCCATTCAGCAGGAAA+GGG - chr1.2:75076109-75076128 MS.gene34138:CDS 50.0%
! ACATGGGAGGGATGCTGATT+TGG - chr1.2:75081358-75081377 MS.gene34138:CDS 50.0%
! CCCCACCCTCACAATTTTCA+CGG + chr1.2:75077652-75077671 None:intergenic 50.0%
! GGTCCCCTTATTTACAGGAC+GGG - chr1.2:75078801-75078820 MS.gene34138:intron 50.0%
!! ACAGGAGCATCCAGTGGTAT+TGG - chr1.2:75076570-75076589 MS.gene34138:intron 50.0%
!! GGTCTAATGGTGTTGCTGAG+TGG - chr1.2:75077107-75077126 MS.gene34138:intron 50.0%
!! TCAGCAGGAAAGGGGTATCT+GGG - chr1.2:75076118-75076137 MS.gene34138:CDS 50.0%
!! TTCAGCAGGAAAGGGGTATC+TGG - chr1.2:75076117-75076136 MS.gene34138:CDS 50.0%
ACTGCGTCTGAGTGGTGCAT+AGG + chr1.2:75078394-75078413 None:intergenic 55.0%
AGGTGGAGTTGGAATGGAGG+GGG + chr1.2:75079693-75079712 None:intergenic 55.0%
ATGACGTGTGTGTTTGGCGG+GGG + chr1.2:75077790-75077809 None:intergenic 55.0%
GCACCTCTTGCCTACATCCA+TGG - chr1.2:75078538-75078557 MS.gene34138:intron 55.0%
GGCCTCACTGCTATTGTCAC+TGG - chr1.2:75076192-75076211 MS.gene34138:CDS 55.0%
GTGGCCATTCAGCAGGAAAG+GGG - chr1.2:75076110-75076129 MS.gene34138:CDS 55.0%
! AGATTGGTGGCAATGCCTCC+TGG + chr1.2:75079941-75079960 None:intergenic 55.0%
! GCAGTCTCCCTCCCTTTTGA+TGG - chr1.2:75079824-75079843 MS.gene34138:intron 55.0%
TGACGTGTGTGTTTGGCGGG+GGG + chr1.2:75077789-75077808 None:intergenic 60.0%
GTGTGTGTTTGGCGGGGGGA+GGG + chr1.2:75077785-75077804 None:intergenic 65.0%
TGTGTGTTTGGCGGGGGGAG+GGG + chr1.2:75077784-75077803 None:intergenic 65.0%
CGTGTGTGTTTGGCGGGGGG+AGG + chr1.2:75077786-75077805 None:intergenic 70.0%
GTGTGTTTGGCGGGGGGAGG+GGG + chr1.2:75077783-75077802 None:intergenic 70.0%
TGTGTTTGGCGGGGGGAGGG+GGG + chr1.2:75077782-75077801 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 75076108 75081427 75076108 ID=MS.gene34138
chr1.2 mRNA 75076108 75081427 75076108 ID=MS.gene34138.t1;Parent=MS.gene34138
chr1.2 exon 75081322 75081427 75081322 ID=MS.gene34138.t1.exon1;Parent=MS.gene34138.t1
chr1.2 CDS 75081322 75081427 75081322 ID=cds.MS.gene34138.t1;Parent=MS.gene34138.t1
chr1.2 exon 75080730 75080961 75080730 ID=MS.gene34138.t1.exon2;Parent=MS.gene34138.t1
chr1.2 CDS 75080730 75080961 75080730 ID=cds.MS.gene34138.t1;Parent=MS.gene34138.t1
chr1.2 exon 75080014 75080093 75080014 ID=MS.gene34138.t1.exon3;Parent=MS.gene34138.t1
chr1.2 CDS 75080014 75080093 75080014 ID=cds.MS.gene34138.t1;Parent=MS.gene34138.t1
chr1.2 exon 75079452 75079605 75079452 ID=MS.gene34138.t1.exon4;Parent=MS.gene34138.t1
chr1.2 CDS 75079452 75079605 75079452 ID=cds.MS.gene34138.t1;Parent=MS.gene34138.t1
chr1.2 exon 75078245 75078323 75078245 ID=MS.gene34138.t1.exon5;Parent=MS.gene34138.t1
chr1.2 CDS 75078245 75078323 75078245 ID=cds.MS.gene34138.t1;Parent=MS.gene34138.t1
chr1.2 exon 75077549 75077633 75077549 ID=MS.gene34138.t1.exon6;Parent=MS.gene34138.t1
chr1.2 CDS 75077549 75077633 75077549 ID=cds.MS.gene34138.t1;Parent=MS.gene34138.t1
chr1.2 exon 75076449 75076495 75076449 ID=MS.gene34138.t1.exon7;Parent=MS.gene34138.t1
chr1.2 CDS 75076449 75076495 75076449 ID=cds.MS.gene34138.t1;Parent=MS.gene34138.t1
chr1.2 exon 75076108 75076272 75076108 ID=MS.gene34138.t1.exon8;Parent=MS.gene34138.t1
chr1.2 CDS 75076108 75076272 75076108 ID=cds.MS.gene34138.t1;Parent=MS.gene34138.t1
Gene Sequence

>MS.gene34138

ATGTGGCCATTCAGCAGGAAAGGGGTATCTGGGTTTTCATGGAAGTCAACAGCTGAAGAAGTTACTCATGGAATTGATGCAACTGGCCTCACTGCTATTGTCACTGGTATATCATCCTTTATTACTCTTTCTTACCCTTTTTGTTTATTTTTCATTTTTCAAGCATGCCCTTTTGTTCAATAGTAGTTTTTATTGCTTTTATGTTGCTAAGTTATTGGGAATTAACACCTTGTACTAGCTTTTCATCATGGATACATAGTTAGGCTTGAGGAGTGATTTACAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGAAGATCCAAAACTAAAATTGATTTCCTGTTGAAATTGGCATAGTCAGGACTTGTTTGTTTATATTGTATGTGATTATGCCTGCTACATCAAATTCATGCAACTGGCTATGATTAATTATTATATGGATATGATGGTATGTTAACAGGAGCATCCAGTGGTATTGGAGTTGAGACTACGCGTGTTCTTGCTTTACATGGTGTCCATGTGATTATGGCTGTTAGAAATAAGGTTAATGCTAATAATACCAGAGAAGCAATACTTAAAGAGATTCCATCAGCAAAAATAGATGTCATGGAGTTAGATCTCAGTTCATTGGAATCTGTCAAGAAATTTGCATCCGAATTTAATTCCTCTGGTCTTCCATTGAACATCTTGATGTAAGAAGAGAAAGTGGCATGGATCTTATTATCAATTTTATTTAGGCAAAACTGCATTGGGAATCTTTTTAATTTAATTTTAAGTTTCAAACAGGTCAAATTAGTTAATTTTTTCCACTGAAAGTTAGTCTTTTATGTTTAAAAACGTCAACAATGTTTGGCCAAATTTCGTTTTTAATCTATATATGTTATCAGAAGTCTTACTTGTGCATTTTAAAAAGTAAATTACATTTTTAACCCATCAAATTTAAAATGATCTTTTTTAGTTTTTATCTAAGATTGTAGCCTTGTTGTCAATGAGGGTCTAATGGTGTTGCTGAGTGGTGAAAAATTATTCATCGTATATCGTTCAGTGATCATGTAAACAAATTTGTACATAAGTGAACTAAGACTCCAAGTTGGTTCAACACTGTAAACATTTTTAAAGATAATGGAGAAATTTGAAAGTAAAGAGAAATGACCCCTGATGCAGTTTTGCCTTTTATTTACTATTTATTTTGACTCCTGGTTTCTATTAAAGTTGTTAATTACTTGTTCTGTCTCGCCATGAATGTCTATGTTCCAGTACTGATCATGATCTTTAATGGAAAACCAGTAGTAGTGTTGTTTTCTGATCTGTTTATTTGTGATTGGAAGAAACAATGCAGGAGTCATGGCATGCCCTTTCATGCTTTCCAATGACAACATCGAACTACAGTTTGCGACAAACCACTTAGGTATTTGTGAAACATGTTAAATTCTTTATTCATTTGAAATTTCATTTCATGACTGATAGTGATATTACTTCAAATTTACTAATTTTGTTCTTTTTATAACATGAATTACTTGTCAATTGCGATCTTTCCGTGAAAATTGTGAGGGTGGGGAACTTTGGCACTCACAAGTCACAGTAGTTTCTAGGGAGTGAAGGCCATTAGATTTATTTATGTCTGATTCAGATAATCAAGAATTAATAGATGAAAAGTGAGAGCTTCCCCCCTCCCCCCGCCAAACACACACGTCATACGGCTATAAATTATCGAGAGTTTGAGACATGAAATCTATGTGTAACTACACTTATTATCTGTCTCAACTTATATAGCTGGGTTATGAACATTCTGTTTTTATGTAATATAATTCCACAGGTCATTTTCTCTTGACAAATCTTTTGTTGGACACAATGAAGAAAACAGCTAGTGAAAGTAAGACTGAAGGAAGAATTGTTAATGTCTCCTCAGAAGCTCACAAATTTGCATATTCTGAAGGAATCCGTTTTGACAAAATTAATGAACAATCAAGGTAATAGGTAGCTTCATTTCAAATCATGATATGTGCTGAAAGTTTTTAAAAATGGAAGAGGAATTTATTGTGTATGTGTGAAAGAGTAATTATAACGGAAACTTCAATTTTATTTTCTTGGGCAATCAATGTTACTATTGGTTTGATTCTGAAAAGGATATAGTTCAATATGAAGTTTGTGATATGTACTTTTTAGTTTGCTGTGAGTCTAGGAGAAGATGCTAGCTTAAACTTTCGACACAAATAACCTGCTGATACGATTTTGCTTTTAGATCAGACAGCTATTGTCGTAGTCTTGTAAACTGTACCTATGCACCACTCAGACGCAGTTAGAATTGTTGGCGAAAGCAGCACACACCATCAAAGTTAGCCACACACCCATGAATCTTTGATGTAAAACACGTAAGCACACTGCAAAGAAAGCAATAGAAAACACAGAGATTTATGTGAATTGGCACCTCTTGCCTACATCCATGGAAGCACCTTAACAAATATATTCTTCATCTCAAATAAAATTAAAAGAATCTATAGCCGAGCTCAATATGTATATCACTCTACAATACTCCCACTCAAGAGTTGCAAGAAATGATAATACGCACATCTCAGTGATCTCCTCACACATAAAATGATCACACACACATTCCTCTCTCTAAGACATGGTTGCCAATACATCCACTCTTCACATGATCAAGGTTGGGGATGCTTCAACTTTTCACAGGTCCCCTTATTTACAGGACGGGATGAGACTCTCATTCATGAATATAACATAGTGGACATTATTATCCCACATTTTCAAGTAGCTTGACTTCATTTCTCTAAGAATCTCGTTACATCTTTTCACCTCTTGAAATGTCTCTTTTAAATTTCCACCACTTACATGATATTTATTATTGTTTGGAAATTATAACTGATTCGCAACTAGAACCAACACTGGAGTTGCTCTTGTAGTACTTGTTGAAAGAAGAGGTGTTATGTGTATATAGTTATGTTTAATTCCTTGTTTACAATTGAAACAGTTGGCTCATATTAGTTGCATGAAGAATTAAGAGTGGAAATATATTTCTGTAGTATTTGTCAACTGGAGTAATGTTATTCCAATTTAATTATGTTTGCTTCCTTTGTATACAGTTACAGCAAATGGGGTGCATATGGACAGTCAAAGCTTGCTAATATTTTACATGCAAACCAACTTACAAAACATTTCAAGGTATGGTATGTTTACTTCTACTATGTAGTGGTGTTACTTATTTACGTGTTATCTAGTGAAGTAGTTTATTGATACTGTTATTATCTCTCATTATTTCAACTTCTGGATGATTAATAAGAAGCAGATGCTCAGAAAAAGAAATAGATGTGTAGCATTAAATCTGCATATTTCTACTGTGGAAAATTACTTTCTTCTGCAATGTGAACTGTGAATGGCAAAATTTTGATTTAGAGTTACTTGTTTTTTTTTTGCAGCATTTGTGTTCAAACTACACTTAAAATCATAATCCTTTTTACAGCATCTGCTATCTTAATCTCCTATCAATTGGTGACTAGTTTTTTTATTATAAAATATCAATGACCAAATATTGTTAAACATCAGCTTTAGTGGAAGTTTTATCCCCCTCCATTCCAACTCCACCTAGTTGGAACAGGCTTTAGTTGTTGGTGTTCCTTCATTCAGGTCTCTGAAAAAGACGCAAATTTTGCATCCCTTTGGGCAACCATAATCATAGAAACATTCTGTTTTCTTTCGCAGTCTCCCTCCCTTTTGATGGTTTTGCCACATTAATTATCTTTGATTTATAACATTATTTGTTACATCTTGATCAGGATGATGGTATGAATATCATTGCAAATTCTCTTCATCCAGGAGGCATTGCCACCAATCTTTACCGTCATAACAGCGCAATCAACGGTAACTATTATAGTATTATACTATTCAGGTTGTCTGTGAATTATACAAGTCCTTTGATGTGGCATTCTAAATGATTTGTTCTGTATCATCTACCGTTATGTGACACTATCTTTCTTGGTTGCTTCATTTTTTTGGTATTTCATGTTAATTTCGTGTTACTTGTCGTAAATTTTTTTTTGGTGGATTTTACAAAATTACAATGATACAAGCTCTCATCCATCTACATTGCTCTAGGTGTTTTATCCTATATTTGGTACATGATATTGTTCAGAACCCACCATCTAATAATATTATGATTAAGGTTGGTCGTGCCCCCCTCTGAATATTGAAAAATTCAGACTTTTTTTTTTTTATCAAGGATGAATATAGACATGTTAAAGACCGCGATCAACCTTTTAAGCTTTAACATCATCGGAAACATGATTACCGTGATCACTGAGAGTCTGAGACAAAAAGACTTTGTACTCCCTCCATACTACAATATTAGTTTTATATTCCTATTATACTCCTAAGTCTAACTATTTTATTTGTTTGTACTCTTTTTATTTCAATTCTTGTAATTAATCTTTCTTATACTATTAGTGAAGGGTAATTTTGTAAAGTAAGCCATACGTTTTATTTTTTTGACAAGAAGCCGTACGTTTTATAAAATCAACAAAATTAATTACATTTCTTAATTCGTGCATTATTTGCTAAAGTGACTAATACTGAAGGACAAAGTGAGTAATTTATAGCACTTGATTGGTACACCAACTCATCCATAATGTATAACAACAATAAAATCATCCCAGAAGTTAGATACTTTGTCAATCTCCACTATTCTTCCCCAACCATTCATACATTATTACTTTATTGTCATTAAGCACTTTATTGTGTTTATCTGACTACTACTATAAATACATTGATGATTTTGAATTGGGTGGTTTTTCTGGTTTGTTTGTTTGCACACTGGCATTCTGCCGTGTCCATAAAATTTGTTTGCTTTTTCATGTGTAGATATTGACAGTAGCTGAGTTTTATAGATATACTATTGATGTTTGATTTATGCAACAGGTATAGTAAATGTGGTTGGCAAACTTGTGATGAAAAACGTTCCACAGGTATGTCAAAATCATTATGACCTACTATTTATAAATGTGAGGGGTCATGTCAAATAAATATCGGTTGTTATAAACATTTATTAATTAACTAAACATAGATTAGAAGCTTTCCGATATTTCACTTTTCTTAGCTTAGTAATTTAGTTGAATGTTAACTTTCTCCTATCTAAATGTAGGGGGCAGCTACAACCTGCTATGTAGCATTGCACCCACAAGTGAAGGGAGTTAGTGGTGAATATTTTTCAGACAATAATGTGGCCAAATCAAGTTCACATGGGAGGGATGCTGATTTGGCTAAGAAACTTTGGGATTTCAGCATGAATTTGGTCAAGGACAAATAG
Protein sequence

>MS.gene34138.t1

MWPFSRKGVSGFSWKSTAEEVTHGIDATGLTAIVTGASSGIGVETTRVLALHGVHVIMAVRNKVNANNTREAILKEIPSAKIDVMELDLSSLESVKKFASEFNSSGLPLNILINNAGVMACPFMLSNDNIELQFATNHLGHFLLTNLLLDTMKKTASESKTEGRIVNVSSEAHKFAYSEGIRFDKINEQSSYSKWGAYGQSKLANILHANQLTKHFKDDGMNIIANSLHPGGIATNLYRHNSAINGIVNVVGKLVMKNVPQGAATTCYVALHPQVKGVSGEYFSDNNVAKSSSHGRDADLAKKLWDFSMNLVKDK