Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034754.t1 | XP_013467847.1 | 99.3 | 145 | 1 | 0 | 1 | 145 | 1 | 145 | 7.00E-76 | 293.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034754.t1 | Q9M1A8 | 61.7 | 141 | 53 | 1 | 5 | 145 | 7 | 146 | 2.0e-47 | 189.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034754.t1 | I3SRI9 | 99.3 | 145 | 1 | 0 | 1 | 145 | 1 | 145 | 5.0e-76 | 293.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26516 | MS.gene034754 | PPI |
| MS.gene24295 | MS.gene034754 | PPI |
| MS.gene034754 | MS.gene64653 | PPI |
| MS.gene034754 | MS.gene030166 | PPI |
| MS.gene034754 | MS.gene27025 | PPI |
| MS.gene034754 | MS.gene64820 | PPI |
| MS.gene034754 | MS.gene81051 | PPI |
| MS.gene034754 | MS.gene67685 | PPI |
| MS.gene26777 | MS.gene034754 | PPI |
| MS.gene034754 | MS.gene27326 | PPI |
| MS.gene049824 | MS.gene034754 | PPI |
| MS.gene034754 | MS.gene049822 | PPI |
| MS.gene034754 | MS.gene066127 | PPI |
| MS.gene034754 | MS.gene051008 | PPI |
| MS.gene063673 | MS.gene034754 | PPI |
| MS.gene034754 | MS.gene39636 | PPI |
| MS.gene053492 | MS.gene034754 | PPI |
| MS.gene67503 | MS.gene034754 | PPI |
| MS.gene034754 | MS.gene90747 | PPI |
| MS.gene064140 | MS.gene034754 | PPI |
| MS.gene034754 | MS.gene047813 | PPI |
| MS.gene004126 | MS.gene034754 | PPI |
| MS.gene034754 | MS.gene24205 | PPI |
| MS.gene034754 | MS.gene65249 | PPI |
| MS.gene004127 | MS.gene034754 | PPI |
| MS.gene034754 | MS.gene08465 | PPI |
| MS.gene034754 | MS.gene68633 | PPI |
| MS.gene034754 | MS.gene27287 | PPI |
| MS.gene26950 | MS.gene034754 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034754.t1 | MTR_1g056890 | 99.310 | 145 | 1 | 0 | 1 | 145 | 1 | 145 | 1.01e-104 | 295 |
| MS.gene034754.t1 | MTR_6g090500 | 44.295 | 149 | 68 | 4 | 1 | 145 | 1 | 138 | 1.11e-33 | 115 |
| MS.gene034754.t1 | MTR_4g133090 | 44.295 | 149 | 68 | 4 | 1 | 145 | 1 | 138 | 1.11e-33 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034754.t1 | AT3G59600 | 61.702 | 141 | 53 | 1 | 5 | 145 | 7 | 146 | 3.27e-64 | 193 |
| MS.gene034754.t1 | AT1G54250 | 61.702 | 141 | 53 | 1 | 5 | 145 | 7 | 146 | 1.64e-63 | 191 |
Find 25 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTTCTGTCCCATCTTTA+AGG | 0.163307 | 1.1:+44189696 | None:intergenic |
| GGATTATAGTAGCCAGTATC+TGG | 0.234479 | 1.1:+44189634 | None:intergenic |
| CACTTCTTGAAGATATCTTT+AGG | 0.284321 | 1.1:-44189937 | MS.gene034754:CDS |
| AGGGAGTTGAATATTTCTTT+TGG | 0.310558 | 1.1:-44187758 | MS.gene034754:CDS |
| ACTTCTTGAAGATATCTTTA+GGG | 0.337546 | 1.1:-44189936 | MS.gene034754:CDS |
| CCTGATGGCACCCCAGATAC+TGG | 0.345604 | 1.1:-44189646 | MS.gene034754:CDS |
| AATTTCTGTCCCATCTTTAA+GGG | 0.357752 | 1.1:+44189697 | None:intergenic |
| CCAGTATCTGGGGTGCCATC+AGG | 0.417512 | 1.1:+44189646 | None:intergenic |
| AACTATGAATATGTCATGTA+TGG | 0.442578 | 1.1:-44188963 | MS.gene034754:CDS |
| TACAGAGTAACAGAGGGTTC+AGG | 0.455659 | 1.1:-44188933 | MS.gene034754:CDS |
| TGAGCTATATCCCTTAAAGA+TGG | 0.478515 | 1.1:-44189707 | MS.gene034754:CDS |
| GATTATAGTAGCCAGTATCT+GGG | 0.489343 | 1.1:+44189635 | None:intergenic |
| AGATACTGGCTACTATAATC+CGG | 0.532782 | 1.1:-44189632 | MS.gene034754:intron |
| TGGGCTTCTGATGATGCTGA+AGG | 0.547894 | 1.1:-44187735 | MS.gene034754:CDS |
| GAGCTATATCCCTTAAAGAT+GGG | 0.563262 | 1.1:-44189706 | MS.gene034754:CDS |
| AGAGTAACAGAGGGTTCAGG+AGG | 0.579301 | 1.1:-44188930 | MS.gene034754:CDS |
| ACAAGTTTGAGCTTGATCAA+AGG | 0.582436 | 1.1:-44187694 | MS.gene034754:CDS |
| GGGCTTCTGATGATGCTGAA+GGG | 0.605774 | 1.1:-44187734 | MS.gene034754:CDS |
| AAAGGTTGTATCTTCTGATG+AGG | 0.609382 | 1.1:-44187676 | MS.gene034754:CDS |
| GTTCCAACACTCAATCCTGA+TGG | 0.623194 | 1.1:-44189661 | MS.gene034754:CDS |
| GTGCCATCAGGATTGAGTGT+TGG | 0.642346 | 1.1:+44189658 | None:intergenic |
| GAGTAACAGAGGGTTCAGGA+GGG | 0.649006 | 1.1:-44188929 | MS.gene034754:CDS |
| AAGCTTTACAGAGTAACAGA+GGG | 0.656174 | 1.1:-44188939 | MS.gene034754:CDS |
| AAAGCTTTACAGAGTAACAG+AGG | 0.672431 | 1.1:-44188940 | MS.gene034754:CDS |
| ATTATAGTAGCCAGTATCTG+GGG | 0.679143 | 1.1:+44189636 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGTTTAATTACCAAAAT+GGG | - | chr1.1:44188944-44188963 | MS.gene034754:CDS | 15.0% |
| !! | AATTTCATAAGAAATAGAAA+CGG | - | chr1.1:44189314-44189333 | MS.gene034754:intron | 15.0% |
| !! | CTATATAATAATCACTTAAT+AGG | - | chr1.1:44188277-44188296 | MS.gene034754:intron | 15.0% |
| !! | TAAATGTTTAATTACCAAAA+TGG | - | chr1.1:44188943-44188962 | MS.gene034754:CDS | 15.0% |
| !!! | CACTTTTTTTTAAATATCAT+AGG | + | chr1.1:44189190-44189209 | None:intergenic | 15.0% |
| !!! | TGTTCTTAATATATTACTTT+TGG | - | chr1.1:44189832-44189851 | MS.gene034754:intron | 15.0% |
| !! | AAATAAGTTCAAATATCTTG+TGG | + | chr1.1:44188131-44188150 | None:intergenic | 20.0% |
| !! | AATAAGTTCAAAATAGCTTA+TGG | + | chr1.1:44188165-44188184 | None:intergenic | 20.0% |
| !! | AGTACTATAATGTTAATCAA+TGG | - | chr1.1:44189694-44189713 | MS.gene034754:CDS | 20.0% |
| !! | TCTTAAAAAAAAACTCTAAC+CGG | + | chr1.1:44189741-44189760 | None:intergenic | 20.0% |
| !!! | ACATTGTTTCTGTAAAAAAA+AGG | - | chr1.1:44189100-44189119 | MS.gene034754:intron | 20.0% |
| !!! | AGTATGTATGTATTTGTTTT+AGG | - | chr1.1:44188987-44189006 | MS.gene034754:CDS | 20.0% |
| !!! | CAATTTTATTTTGCATTACT+TGG | + | chr1.1:44188511-44188530 | None:intergenic | 20.0% |
| !!! | GCTAATTTTTTTATTTTCCA+GGG | - | chr1.1:44188606-44188625 | MS.gene034754:intron | 20.0% |
| !!! | TATTTTTCGATTCTTTTAGT+GGG | - | chr1.1:44187759-44187778 | MS.gene034754:CDS | 20.0% |
| !!! | TGCTAATTTTTTTATTTTCC+AGG | - | chr1.1:44188605-44188624 | MS.gene034754:intron | 20.0% |
| !!! | TTAATATATTACTTTTGGCA+GGG | - | chr1.1:44189837-44189856 | MS.gene034754:intron | 20.0% |
| !!! | TTATTTTTCGATTCTTTTAG+TGG | - | chr1.1:44187758-44187777 | MS.gene034754:CDS | 20.0% |
| !!! | TTTTATCAATTCATGTTGTT+TGG | - | chr1.1:44188897-44188916 | MS.gene034754:intron | 20.0% |
| ! | AACTATGAATATGTCATGTA+TGG | - | chr1.1:44188651-44188670 | MS.gene034754:intron | 25.0% |
| ! | ACGATTAATGAATGTAATAC+CGG | + | chr1.1:44188004-44188023 | None:intergenic | 25.0% |
| ! | ACTTCTTGAAGATATCTTTA+GGG | - | chr1.1:44187678-44187697 | MS.gene034754:CDS | 25.0% |
| ! | CTTAAAAAAAAACTCTAACC+GGG | + | chr1.1:44189740-44189759 | None:intergenic | 25.0% |
| ! | GACAAAAAGTTATTCGAAAA+AGG | - | chr1.1:44187721-44187740 | MS.gene034754:CDS | 25.0% |
| ! | TAAAACAGTAATTCCTTTCT+CGG | + | chr1.1:44188755-44188774 | None:intergenic | 25.0% |
| ! | TAACCAAATTTAGTACAGAT+AGG | + | chr1.1:44188445-44188464 | None:intergenic | 25.0% |
| ! | TATAAAACAAACTGTTACTG+CGG | - | chr1.1:44189223-44189242 | MS.gene034754:intron | 25.0% |
| ! | TTGGATAAACTCATATGAAA+GGG | - | chr1.1:44188872-44188891 | MS.gene034754:intron | 25.0% |
| ! | TTTGGATAAACTCATATGAA+AGG | - | chr1.1:44188871-44188890 | MS.gene034754:intron | 25.0% |
| !! | AATATCATAGGTTTTTCTAG+AGG | + | chr1.1:44189178-44189197 | None:intergenic | 25.0% |
| !! | AGTTGAATATTTCTTTTGGT+GGG | - | chr1.1:44189860-44189879 | MS.gene034754:intron | 25.0% |
| !! | TCTAGAGGTTTTTATATCAA+AGG | + | chr1.1:44189163-44189182 | None:intergenic | 25.0% |
| !! | TGACAGAATTGATTTATGTT+TGG | - | chr1.1:44188853-44188872 | MS.gene034754:intron | 25.0% |
| !!! | AAAGATAAAAGTGTTTAGGT+TGG | + | chr1.1:44189291-44189310 | None:intergenic | 25.0% |
| !!! | CTTAATATATTACTTTTGGC+AGG | - | chr1.1:44189836-44189855 | MS.gene034754:intron | 25.0% |
| !!! | TTGCAAAGATAAAAGTGTTT+AGG | + | chr1.1:44189295-44189314 | None:intergenic | 25.0% |
| !!! | TTTTTATTTTCCAGGGTAAT+CGG | - | chr1.1:44188613-44188632 | MS.gene034754:intron | 25.0% |
| AAATTTCTGTCCCATCTTTA+AGG | + | chr1.1:44187921-44187940 | None:intergenic | 30.0% | |
| AATTTCTGTCCCATCTTTAA+GGG | + | chr1.1:44187920-44187939 | None:intergenic | 30.0% | |
| ATTACTTGGTTAAGAGCAAT+AGG | + | chr1.1:44188497-44188516 | None:intergenic | 30.0% | |
| CACTTCTTGAAGATATCTTT+AGG | - | chr1.1:44187677-44187696 | MS.gene034754:CDS | 30.0% | |
| CCAAAAACAAAATACAACCT+TGG | - | chr1.1:44189133-44189152 | MS.gene034754:intron | 30.0% | |
| GACTAAATTGAGAAATCACA+TGG | - | chr1.1:44189384-44189403 | MS.gene034754:intron | 30.0% | |
| TTACTGCGGAAAAAATGAAT+GGG | - | chr1.1:44189237-44189256 | MS.gene034754:intron | 30.0% | |
| TTTATATCAAAGGTAAGCCA+AGG | + | chr1.1:44189153-44189172 | None:intergenic | 30.0% | |
| ! | AGGGAGTTGAATATTTCTTT+TGG | - | chr1.1:44189856-44189875 | MS.gene034754:intron | 30.0% |
| ! | ATCAATTCATGTTGTTTGGA+TGG | - | chr1.1:44188901-44188920 | MS.gene034754:intron | 30.0% |
| ! | CGAATAACTTTTTGTCATCT+GGG | + | chr1.1:44187717-44187736 | None:intergenic | 30.0% |
| ! | CTCAAATCGATTCATATGAA+AGG | + | chr1.1:44189411-44189430 | None:intergenic | 30.0% |
| ! | GAGTTGAATATTTCTTTTGG+TGG | - | chr1.1:44189859-44189878 | MS.gene034754:intron | 30.0% |
| ! | GATGGCATCTTTTCTTTTTA+TGG | - | chr1.1:44188544-44188563 | MS.gene034754:intron | 30.0% |
| ! | TCGAATAACTTTTTGTCATC+TGG | + | chr1.1:44187718-44187737 | None:intergenic | 30.0% |
| ! | TTTTGCATATAGTGTGTGTT+TGG | - | chr1.1:44188775-44188794 | MS.gene034754:intron | 30.0% |
| !! | CTTCAACTGGAATTGATTTT+GGG | - | chr1.1:44189456-44189475 | MS.gene034754:intron | 30.0% |
| !! | GAGTTTGACAGAATTGATTT+TGG | - | chr1.1:44188817-44188836 | MS.gene034754:intron | 30.0% |
| !! | GATCTTTTGATTGTGATACA+AGG | - | chr1.1:44189783-44189802 | MS.gene034754:intron | 30.0% |
| !! | GTTGTACTATGATTGATTTG+TGG | - | chr1.1:44189805-44189824 | MS.gene034754:intron | 30.0% |
| !! | TTCAACTGGAATTGATTTTG+GGG | - | chr1.1:44189457-44189476 | MS.gene034754:intron | 30.0% |
| !!! | CCAAGGTTGTATTTTGTTTT+TGG | + | chr1.1:44189136-44189155 | None:intergenic | 30.0% |
| !!! | GTTTTTGGAACAATGTCAAA+GGG | - | chr1.1:44188385-44188404 | MS.gene034754:intron | 30.0% |
| AAAGCTTTACAGAGTAACAG+AGG | - | chr1.1:44188674-44188693 | MS.gene034754:intron | 35.0% | |
| AAAGGTTGTATCTTCTGATG+AGG | - | chr1.1:44189938-44189957 | MS.gene034754:CDS | 35.0% | |
| AAGCTTTACAGAGTAACAGA+GGG | - | chr1.1:44188675-44188694 | MS.gene034754:intron | 35.0% | |
| ACAAGTTTGAGCTTGATCAA+AGG | - | chr1.1:44189920-44189939 | MS.gene034754:CDS | 35.0% | |
| ATTATAGTAGCCAGTATCTG+GGG | + | chr1.1:44187981-44188000 | None:intergenic | 35.0% | |
| CACTTGAAAACAACATGCAT+CGG | + | chr1.1:44189633-44189652 | None:intergenic | 35.0% | |
| CATTAATCGTTGCATGACTT+GGG | - | chr1.1:44188014-44188033 | MS.gene034754:intron | 35.0% | |
| GAATACAGTGATGATTATCC+AGG | - | chr1.1:44188411-44188430 | MS.gene034754:intron | 35.0% | |
| GAGCCTATCTGTACTAAATT+TGG | - | chr1.1:44188439-44188458 | MS.gene034754:intron | 35.0% | |
| GAGCTATATCCCTTAAAGAT+GGG | - | chr1.1:44187908-44187927 | MS.gene034754:intron | 35.0% | |
| GATTATAGTAGCCAGTATCT+GGG | + | chr1.1:44187982-44188001 | None:intergenic | 35.0% | |
| GTTACTGCGGAAAAAATGAA+TGG | - | chr1.1:44189236-44189255 | MS.gene034754:intron | 35.0% | |
| TCATTAATCGTTGCATGACT+TGG | - | chr1.1:44188013-44188032 | MS.gene034754:intron | 35.0% | |
| TGAGCTATATCCCTTAAAGA+TGG | - | chr1.1:44187907-44187926 | MS.gene034754:intron | 35.0% | |
| ! | ACAGAAATTTTCTCTTGCAC+TGG | - | chr1.1:44187931-44187950 | MS.gene034754:intron | 35.0% |
| ! | AGATACTGGCTACTATAATC+CGG | - | chr1.1:44187982-44188001 | MS.gene034754:intron | 35.0% |
| ! | ATGAACATTTGAGCCCATTT+TGG | + | chr1.1:44188960-44188979 | None:intergenic | 35.0% |
| ! | GTCATTTAGAAGCTAGTTTC+TGG | - | chr1.1:44189607-44189626 | MS.gene034754:intron | 35.0% |
| ! | TCCTTTGAAGAAAACAACCA+TGG | + | chr1.1:44189366-44189385 | None:intergenic | 35.0% |
| !! | ACCATGGTTGTTTTCTTCAA+AGG | - | chr1.1:44189362-44189381 | MS.gene034754:intron | 35.0% |
| !! | CTTATTTTCATGAGCTCTCT+AGG | - | chr1.1:44188179-44188198 | MS.gene034754:intron | 35.0% |
| !! | GCTTCAACTGGAATTGATTT+TGG | - | chr1.1:44189455-44189474 | MS.gene034754:intron | 35.0% |
| !! | TTGGAGAAGATAAGAGTACT+GGG | + | chr1.1:44189272-44189291 | None:intergenic | 35.0% |
| !!! | CGTTTTTGGAACAATGTCAA+AGG | - | chr1.1:44188384-44188403 | MS.gene034754:intron | 35.0% |
| !!! | GTTTTTCTGAAACAACTTCC+CGG | - | chr1.1:44189719-44189738 | MS.gene034754:CDS | 35.0% |
| AATTGCTACTACTGCACAGA+TGG | - | chr1.1:44188526-44188545 | MS.gene034754:intron | 40.0% | |
| AGATCGCTTTCAACTCTAAC+TGG | + | chr1.1:44189768-44189787 | None:intergenic | 40.0% | |
| CGATTGGGAAATTATGACCA+TGG | - | chr1.1:44189346-44189365 | MS.gene034754:intron | 40.0% | |
| CGTGGGTCAAAATGATGTTT+GGG | + | chr1.1:44189509-44189528 | None:intergenic | 40.0% | |
| GAGTATCAGTTTACCGAGAA+AGG | - | chr1.1:44188739-44188758 | MS.gene034754:intron | 40.0% | |
| GATCGCTTTCAACTCTAACT+GGG | + | chr1.1:44189767-44189786 | None:intergenic | 40.0% | |
| GGATTATAGTAGCCAGTATC+TGG | + | chr1.1:44187983-44188002 | None:intergenic | 40.0% | |
| GGTAAACTGATACTCAAAGC+AGG | + | chr1.1:44188734-44188753 | None:intergenic | 40.0% | |
| TAATTTCCCAATCGTGGCAA+CGG | + | chr1.1:44189340-44189359 | None:intergenic | 40.0% | |
| TCGTGGGTCAAAATGATGTT+TGG | + | chr1.1:44189510-44189529 | None:intergenic | 40.0% | |
| TGGTCATAATTTCCCAATCG+TGG | + | chr1.1:44189346-44189365 | None:intergenic | 40.0% | |
| TTGGAACAATGTCAAAGGGA+GGG | - | chr1.1:44188389-44188408 | MS.gene034754:intron | 40.0% | |
| ! | GTTGGAGAAGATAAGAGTAC+TGG | + | chr1.1:44189273-44189292 | None:intergenic | 40.0% |
| ! | TTTGGAACAATGTCAAAGGG+AGG | - | chr1.1:44188388-44188407 | MS.gene034754:intron | 40.0% |
| !! | ATAGTGTGTGTTTGGTTCTG+CGG | - | chr1.1:44188783-44188802 | MS.gene034754:intron | 40.0% |
| !!! | CGATGCATGTTGTTTTCAAG+TGG | - | chr1.1:44189631-44189650 | MS.gene034754:intron | 40.0% |
| AACAAGACTATGCCCCTGTT+TGG | + | chr1.1:44189582-44189601 | None:intergenic | 45.0% | |
| GTAGAACGCAGAACCAAACA+GGG | - | chr1.1:44189566-44189585 | MS.gene034754:intron | 45.0% | |
| GTTCCAACACTCAATCCTGA+TGG | - | chr1.1:44187953-44187972 | MS.gene034754:intron | 45.0% | |
| TACAGAGTAACAGAGGGTTC+AGG | - | chr1.1:44188681-44188700 | MS.gene034754:intron | 45.0% | |
| TACAGATAGGCTCAAACACC+TGG | + | chr1.1:44188432-44188451 | None:intergenic | 45.0% | |
| TAGAACGCAGAACCAAACAG+GGG | - | chr1.1:44189567-44189586 | MS.gene034754:intron | 45.0% | |
| TGTAGAACGCAGAACCAAAC+AGG | - | chr1.1:44189565-44189584 | MS.gene034754:intron | 45.0% | |
| TTTGAGTAGACGCAGAAGCT+AGG | - | chr1.1:44189425-44189444 | MS.gene034754:intron | 45.0% | |
| ! | CAATTGATTGCCGATTACCC+TGG | + | chr1.1:44188626-44188645 | None:intergenic | 45.0% |
| ! | CTAGGAAAACTGGCTTCAAC+TGG | - | chr1.1:44189443-44189462 | MS.gene034754:intron | 45.0% |
| !! | AGGGGCATAGTCTTGTTGAT+TGG | - | chr1.1:44189585-44189604 | MS.gene034754:intron | 45.0% |
| !! | TATAGTAATTAAAAATTAAT+CGG | - | chr1.1:44189060-44189079 | MS.gene034754:intron | 5.0% |
| AAACGCGTTCGCATGGAACT+AGG | + | chr1.1:44188369-44188388 | None:intergenic | 50.0% | |
| AACGCGTTCGCATGGAACTA+GGG | + | chr1.1:44188368-44188387 | None:intergenic | 50.0% | |
| AGAGTAACAGAGGGTTCAGG+AGG | - | chr1.1:44188684-44188703 | MS.gene034754:intron | 50.0% | |
| GACGCAGAAGCTAGGAAAAC+TGG | - | chr1.1:44189433-44189452 | MS.gene034754:intron | 50.0% | |
| GAGTAACAGAGGGTTCAGGA+GGG | - | chr1.1:44188685-44188704 | MS.gene034754:intron | 50.0% | |
| GTGCCATCAGGATTGAGTGT+TGG | + | chr1.1:44187959-44187978 | None:intergenic | 50.0% | |
| GTTCCAAAAACGCGTTCGCA+TGG | + | chr1.1:44188376-44188395 | None:intergenic | 50.0% | |
| ! | GGGCTTCTGATGATGCTGAA+GGG | - | chr1.1:44189880-44189899 | MS.gene034754:intron | 50.0% |
| ! | GTTCCATGCGAACGCGTTTT+TGG | - | chr1.1:44188370-44188389 | MS.gene034754:intron | 50.0% |
| ! | TGCATGACTTGGGATCTCTC+TGG | - | chr1.1:44188024-44188043 | MS.gene034754:intron | 50.0% |
| ! | TGGGCTTCTGATGATGCTGA+AGG | - | chr1.1:44189879-44189898 | MS.gene034754:intron | 50.0% |
| AAACGGCCGTTGCCACGATT+GGG | - | chr1.1:44189331-44189350 | MS.gene034754:intron | 55.0% | |
| ACCACGCAAACGTGCGTTTG+AGG | - | chr1.1:44189541-44189560 | MS.gene034754:intron | 55.0% | |
| CACGTTTGCGTGGTCAAACG+CGG | + | chr1.1:44189535-44189554 | None:intergenic | 55.0% | |
| CGCATGGAACTAGGGACTGA+GGG | + | chr1.1:44188360-44188379 | None:intergenic | 55.0% | |
| GTGGTCAAACGCGGTTTCGT+GGG | + | chr1.1:44189526-44189545 | None:intergenic | 55.0% | |
| TCGCATGGAACTAGGGACTG+AGG | + | chr1.1:44188361-44188380 | None:intergenic | 55.0% | |
| !! | GTGTGTGTTTGGTTCTGCGG+TGG | - | chr1.1:44188786-44188805 | MS.gene034754:intron | 55.0% |
| CCTGATGGCACCCCAGATAC+TGG | - | chr1.1:44187968-44187987 | MS.gene034754:intron | 60.0% | |
| CGTGGTCAAACGCGGTTTCG+TGG | + | chr1.1:44189527-44189546 | None:intergenic | 60.0% | |
| GAAACGGCCGTTGCCACGAT+TGG | - | chr1.1:44189330-44189349 | MS.gene034754:intron | 60.0% | |
| GCCTCAAACGCACGTTTGCG+TGG | + | chr1.1:44189545-44189564 | None:intergenic | 60.0% | |
| ! | CCAGTATCTGGGGTGCCATC+AGG | + | chr1.1:44187971-44187990 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 44187667 | 44189969 | 44187667 | ID=MS.gene034754 |
| chr1.1 | mRNA | 44187667 | 44189969 | 44187667 | ID=MS.gene034754.t1;Parent=MS.gene034754 |
| chr1.1 | exon | 44189894 | 44189969 | 44189894 | ID=MS.gene034754.t1.exon1;Parent=MS.gene034754.t1 |
| chr1.1 | CDS | 44189894 | 44189969 | 44189894 | ID=cds.MS.gene034754.t1;Parent=MS.gene034754.t1 |
| chr1.1 | exon | 44189633 | 44189790 | 44189633 | ID=MS.gene034754.t1.exon2;Parent=MS.gene034754.t1 |
| chr1.1 | CDS | 44189633 | 44189790 | 44189633 | ID=cds.MS.gene034754.t1;Parent=MS.gene034754.t1 |
| chr1.1 | exon | 44188918 | 44189009 | 44188918 | ID=MS.gene034754.t1.exon3;Parent=MS.gene034754.t1 |
| chr1.1 | CDS | 44188918 | 44189009 | 44188918 | ID=cds.MS.gene034754.t1;Parent=MS.gene034754.t1 |
| chr1.1 | exon | 44187667 | 44187778 | 44187667 | ID=MS.gene034754.t1.exon4;Parent=MS.gene034754.t1 |
| chr1.1 | CDS | 44187667 | 44187778 | 44187667 | ID=cds.MS.gene034754.t1;Parent=MS.gene034754.t1 |
| Gene Sequence |
| Protein sequence |
