Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26777.t1 | RHN64465.1 | 97.9 | 1056 | 21 | 1 | 1 | 1055 | 152 | 1207 | 0.00E+00 | 2102.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26777.t1 | F4I366 | 69.1 | 1060 | 311 | 5 | 1 | 1052 | 128 | 1178 | 0.0e+00 | 1491.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26777.t1 | G7JR14 | 97.9 | 1056 | 21 | 1 | 1 | 1055 | 136 | 1191 | 0.0e+00 | 2102.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26777.t1 | MTR_4g124030 | 97.917 | 1056 | 21 | 1 | 1 | 1055 | 136 | 1191 | 0.0 | 2148 |
| MS.gene26777.t1 | MTR_8g023445 | 28.649 | 1110 | 618 | 36 | 1 | 1047 | 1004 | 2002 | 2.44e-101 | 352 |
| MS.gene26777.t1 | MTR_1g023500 | 27.642 | 1107 | 636 | 35 | 1 | 1038 | 165 | 1175 | 2.73e-99 | 340 |
| MS.gene26777.t1 | MTR_3g105990 | 27.929 | 1067 | 622 | 38 | 27 | 1043 | 215 | 1184 | 2.54e-89 | 312 |
| MS.gene26777.t1 | MTR_0002s0510 | 28.610 | 367 | 229 | 8 | 634 | 969 | 709 | 1073 | 3.83e-28 | 124 |
| MS.gene26777.t1 | MTR_4g051130 | 25.635 | 394 | 251 | 9 | 634 | 990 | 635 | 1023 | 3.59e-26 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26777.t1 | AT1G29940 | 69.057 | 1060 | 311 | 5 | 1 | 1052 | 128 | 1178 | 0.0 | 1526 |
| MS.gene26777.t1 | AT5G45140 | 27.892 | 1115 | 634 | 31 | 1 | 1047 | 149 | 1161 | 1.15e-108 | 366 |
| MS.gene26777.t1 | AT5G45140 | 27.892 | 1115 | 634 | 31 | 1 | 1047 | 149 | 1161 | 1.15e-108 | 366 |
| MS.gene26777.t1 | AT4G21710 | 37.575 | 503 | 261 | 9 | 557 | 1038 | 702 | 1172 | 1.96e-90 | 315 |
| MS.gene26777.t1 | AT3G18090 | 28.977 | 880 | 531 | 27 | 195 | 1042 | 233 | 1050 | 1.59e-84 | 296 |
| MS.gene26777.t1 | AT3G23780 | 26.481 | 1080 | 621 | 33 | 23 | 1042 | 201 | 1167 | 2.29e-82 | 291 |
| MS.gene26777.t1 | AT3G23780 | 26.481 | 1080 | 621 | 33 | 23 | 1042 | 201 | 1167 | 2.29e-82 | 291 |
| MS.gene26777.t1 | AT3G18090 | 26.364 | 660 | 424 | 20 | 195 | 834 | 233 | 850 | 6.22e-47 | 182 |
| MS.gene26777.t1 | AT3G18090 | 26.364 | 660 | 424 | 20 | 195 | 834 | 233 | 850 | 6.77e-47 | 182 |
| MS.gene26777.t1 | AT5G45140 | 24.162 | 716 | 417 | 22 | 1 | 667 | 149 | 787 | 2.79e-40 | 161 |
| MS.gene26777.t1 | ATCG00190 | 25.564 | 399 | 245 | 9 | 634 | 990 | 650 | 1038 | 4.96e-27 | 119 |
Find 243 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTTATATATTTAGATATT+TGG | 0.150423 | 8.2:-10188006 | MS.gene26777:CDS |
| ATCCTCATGCATTTCCTTCT+AGG | 0.177043 | 8.2:-10191572 | MS.gene26777:CDS |
| GGAGCGCAAGGCTTGGTTTC+TGG | 0.199399 | 8.2:-10204764 | MS.gene26777:intron |
| TTTCTTGGAGCTCTTCTTAC+TGG | 0.215958 | 8.2:+10188080 | None:intergenic |
| ATGGAGATAAGTTTGATTTC+AGG | 0.216355 | 8.2:-10202112 | MS.gene26777:CDS |
| GACTGTCTCCATGCCTTTAC+TGG | 0.220510 | 8.2:+10188034 | None:intergenic |
| CTGACATGTGAGATATTTAT+TGG | 0.222815 | 8.2:-10188858 | MS.gene26777:CDS |
| TTTCTGAGATCATGCATAAT+TGG | 0.229170 | 8.2:+10204203 | None:intergenic |
| CCTTGTAGGACACAAGTTTC+CGG | 0.254365 | 8.2:+10206124 | None:intergenic |
| CTAAATTTGTCACCAATGAT+AGG | 0.265803 | 8.2:+10191693 | None:intergenic |
| TTATTGGTTGCCGGGTTATC+TGG | 0.271464 | 8.2:+10188309 | None:intergenic |
| AAACGCTATAGTTGCAGTTT+TGG | 0.284934 | 8.2:-10195832 | MS.gene26777:CDS |
| GCCAAATATCTAAATATATA+AGG | 0.285773 | 8.2:+10188005 | None:intergenic |
| GATGACGATTGCCATGCTTT+TGG | 0.303530 | 8.2:-10191550 | MS.gene26777:CDS |
| CTGCTTATCTTCTGCATGAT+AGG | 0.305099 | 8.2:-10188217 | MS.gene26777:CDS |
| GTTCTTACTGTTCTTCTAGA+TGG | 0.314908 | 8.2:-10196919 | MS.gene26777:CDS |
| TCTGATTACAATTTATCTTA+AGG | 0.322503 | 8.2:-10203393 | MS.gene26777:intron |
| AACTTTATTACCTTCGTAAT+GGG | 0.326822 | 8.2:-10204785 | MS.gene26777:CDS |
| GCCTCAAAAGCGGCCAGTTC+GGG | 0.328796 | 8.2:-10188117 | MS.gene26777:CDS |
| TTCATTGTAAATGCTACAAT+AGG | 0.329799 | 8.2:+10194055 | None:intergenic |
| TCTCCATGCCTTTACTGGTT+TGG | 0.330407 | 8.2:+10188039 | None:intergenic |
| CATCGAGGTGCCTTATTTGC+CGG | 0.333601 | 8.2:-10198412 | MS.gene26777:CDS |
| ATCCCCGTATTTCCAGAAAA+TGG | 0.335691 | 8.2:+10191615 | None:intergenic |
| TCAGAAGTTATATCATCTTC+AGG | 0.338084 | 8.2:-10196132 | MS.gene26777:intron |
| ATCAACAAGTGAAGCCGATT+TGG | 0.339438 | 8.2:+10188962 | None:intergenic |
| CTTCTAGATGGTTGTATTGT+TGG | 0.343537 | 8.2:-10196907 | MS.gene26777:CDS |
| ATAACCCGGCAACCAATAAA+AGG | 0.354560 | 8.2:-10188305 | MS.gene26777:CDS |
| CCCTGATAGCTTGCAAAATC+AGG | 0.355438 | 8.2:-10203435 | MS.gene26777:CDS |
| AGTACGAAGTCCGGCAAATA+AGG | 0.358031 | 8.2:+10198402 | None:intergenic |
| CAAGGAAGAGGCATCGGAAA+TGG | 0.360830 | 8.2:-10206106 | MS.gene26777:CDS |
| TCAAATTTACATAAATTTCT+CGG | 0.373209 | 8.2:+10204453 | None:intergenic |
| GTTTCATGGACAAATATATC+AGG | 0.373827 | 8.2:-10195668 | MS.gene26777:intron |
| TTCCGATGCCTCTTCCTTGT+AGG | 0.374406 | 8.2:+10206110 | None:intergenic |
| CTTGTAGGACACAAGTTTCC+GGG | 0.374616 | 8.2:+10206125 | None:intergenic |
| AGAAGAACAGTAAGAACTTC+AGG | 0.375406 | 8.2:+10196925 | None:intergenic |
| TGCCCTGTTCACACACCTGA+TGG | 0.380461 | 8.2:-10198237 | MS.gene26777:CDS |
| ATGTATCACTTTCAGATGAT+AGG | 0.383427 | 8.2:-10194089 | MS.gene26777:intron |
| AGTGAAGCCGATTTGGATCC+AGG | 0.387474 | 8.2:+10188969 | None:intergenic |
| TCATTGTAAATGCTACAATA+GGG | 0.391512 | 8.2:+10194056 | None:intergenic |
| ACTATATTGACCTGTTCAAA+TGG | 0.392258 | 8.2:+10196573 | None:intergenic |
| TCGAAGGACAACCTTTATCT+AGG | 0.392383 | 8.2:+10194206 | None:intergenic |
| AGCCTCAAAAGCGGCCAGTT+CGG | 0.393073 | 8.2:-10188118 | MS.gene26777:CDS |
| TGAGGATTTATAATGAGATC+TGG | 0.393154 | 8.2:+10191588 | None:intergenic |
| TAACATATGCAGATATGATA+TGG | 0.397629 | 8.2:-10195734 | MS.gene26777:intron |
| AGCTGATCAAACCTCGTTAA+CGG | 0.402782 | 8.2:-10204811 | MS.gene26777:CDS |
| ACTGGGCGAATAAATCTAGA+AGG | 0.404724 | 8.2:+10196648 | None:intergenic |
| TGAAAGCATGCTTCCACAAA+TGG | 0.405174 | 8.2:+10188154 | None:intergenic |
| GCTGATGTGTGTTCCATTTG+TGG | 0.407697 | 8.2:-10188167 | MS.gene26777:CDS |
| ATTGAAAGTATGTTGACAAC+TGG | 0.415887 | 8.2:-10201832 | MS.gene26777:CDS |
| TATCCCACTTCCAGATCATC+TGG | 0.418411 | 8.2:+10196723 | None:intergenic |
| GCCCTGTTCACACACCTGAT+GGG | 0.420267 | 8.2:-10198236 | MS.gene26777:CDS |
| GAAAAGGGAAAGGGCGTTGT+TGG | 0.421686 | 8.2:-10204407 | MS.gene26777:CDS |
| ATGCTACAATAGGGTTCATC+TGG | 0.424466 | 8.2:+10194065 | None:intergenic |
| CTTCAGTGTCTAGAATATAT+TGG | 0.424812 | 8.2:-10204314 | MS.gene26777:intron |
| TTTGGAATCTGTTGCTGCTA+AGG | 0.425213 | 8.2:-10191532 | MS.gene26777:intron |
| TCCAGTTACTTCATCGTGAA+TGG | 0.427058 | 8.2:-10205819 | MS.gene26777:intron |
| TGGATTTCCTCATGAGTTGC+AGG | 0.429898 | 8.2:+10196375 | None:intergenic |
| TGCAAGCTATCAGGGTTATC+CGG | 0.431986 | 8.2:+10203443 | None:intergenic |
| GTAGAACGTGGAATGTTTCA+TGG | 0.433330 | 8.2:-10195682 | MS.gene26777:CDS |
| AAACTTTATTACCTTCGTAA+TGG | 0.434219 | 8.2:-10204786 | MS.gene26777:CDS |
| AACATTGATGAATTTCCAAC+AGG | 0.435304 | 8.2:-10195858 | MS.gene26777:CDS |
| CGGCCAGTTCGGGATATTCC+CGG | 0.438835 | 8.2:-10188107 | MS.gene26777:CDS |
| AGACGACTTGTTTAGAATCA+TGG | 0.440588 | 8.2:+10195705 | None:intergenic |
| ATGGCAATCGTCATCCTAGA+AGG | 0.440798 | 8.2:+10191558 | None:intergenic |
| TGACATGTGAGATATTTATT+GGG | 0.442222 | 8.2:-10188857 | MS.gene26777:CDS |
| ACTCATTGGTCCATTTGAAC+AGG | 0.443814 | 8.2:-10196583 | MS.gene26777:intron |
| TGGACTTCCACATGTTGGTC+AGG | 0.447925 | 8.2:-10194173 | MS.gene26777:intron |
| ATTAAAAGAGGAGGGAAGAT+TGG | 0.449156 | 8.2:-10202140 | MS.gene26777:CDS |
| TTATAATGAAAAGTATGAAA+AGG | 0.451296 | 8.2:-10204423 | MS.gene26777:CDS |
| CGAAGCCGTTGATAATAAAC+AGG | 0.451989 | 8.2:+10188834 | None:intergenic |
| CCCTGTTCACACACCTGATG+GGG | 0.452005 | 8.2:-10198235 | MS.gene26777:CDS |
| TGCCCTTTCACCAACAAGCT+GGG | 0.456100 | 8.2:+10204382 | None:intergenic |
| AATGAAAACATTGAACTCAT+TGG | 0.456136 | 8.2:-10196597 | MS.gene26777:CDS |
| GCTTCACTTGTTGATGAGCT+TGG | 0.456854 | 8.2:-10188954 | MS.gene26777:CDS |
| CACTTAGCATTCCTGTTGGA+TGG | 0.457079 | 8.2:+10196355 | None:intergenic |
| AGCTCTTCTTACTGGTATCC+CGG | 0.457803 | 8.2:+10188088 | None:intergenic |
| AGCATGGGTGGAGCATATCC+TGG | 0.460373 | 8.2:-10196690 | MS.gene26777:CDS |
| ACGAAATATGTACCAGTGTC+AGG | 0.462159 | 8.2:-10196289 | MS.gene26777:intron |
| GGTCCAGGTAGAAATATCTT+TGG | 0.462478 | 8.2:+10196949 | None:intergenic |
| TATAATGAAAAGTATGAAAA+GGG | 0.463600 | 8.2:-10204422 | MS.gene26777:CDS |
| TTGCCCTTTCACCAACAAGC+TGG | 0.464006 | 8.2:+10204381 | None:intergenic |
| GTTGTTGGGACCCAGCTTGT+TGG | 0.469302 | 8.2:-10204392 | MS.gene26777:CDS |
| CTTCCACCATCTCCACCGTC+AGG | 0.471301 | 8.2:+10196411 | None:intergenic |
| GACCCAGCTTGTTGGTGAAA+GGG | 0.472523 | 8.2:-10204384 | MS.gene26777:CDS |
| CATGAGGAAATCCATCCAAC+AGG | 0.472590 | 8.2:-10196366 | MS.gene26777:CDS |
| TGAGATCATGCATAATTGGT+TGG | 0.473528 | 8.2:+10204207 | None:intergenic |
| CTTCTTGACGAGATTAAAAG+AGG | 0.477849 | 8.2:-10202152 | MS.gene26777:CDS |
| GAAAATGGCATATCAATGTC+TGG | 0.480681 | 8.2:+10191630 | None:intergenic |
| AAGGAAGAGGCATCGGAAAT+GGG | 0.483388 | 8.2:-10206105 | MS.gene26777:CDS |
| GGTTCCACTGAACTACGAAA+TGG | 0.483461 | 8.2:+10188990 | None:intergenic |
| GGAATTGATATATTTCTCAC+TGG | 0.484324 | 8.2:+10196630 | None:intergenic |
| CACGGTTGTAGTACGAAGTC+CGG | 0.484463 | 8.2:+10198393 | None:intergenic |
| GACCTATAATTCTATCAAAA+CGG | 0.485327 | 8.2:-10205779 | MS.gene26777:CDS |
| TTTCGTAGTTCAGTGGAACC+TGG | 0.485765 | 8.2:-10188987 | MS.gene26777:CDS |
| AAAAGGGAAAGGGCGTTGTT+GGG | 0.486687 | 8.2:-10204406 | MS.gene26777:CDS |
| GACTTCAGGCTTAACACTCC+AGG | 0.488119 | 8.2:-10198482 | MS.gene26777:CDS |
| GATGCAGATTCCAGATGATC+TGG | 0.489032 | 8.2:-10196733 | MS.gene26777:intron |
| GGGAATACGATTTGGAGAAA+TGG | 0.489085 | 8.2:-10188267 | MS.gene26777:CDS |
| GGAGCTAACGTCTCTGATAC+AGG | 0.489156 | 8.2:-10187933 | MS.gene26777:CDS |
| GGACCCAGCTTGTTGGTGAA+AGG | 0.490200 | 8.2:-10204385 | MS.gene26777:CDS |
| TAAATTTGTCACCAATGATA+GGG | 0.491135 | 8.2:+10191694 | None:intergenic |
| GTTGGCTACAAGTATACCTC+TGG | 0.493375 | 8.2:-10201806 | MS.gene26777:CDS |
| CACCCTCGAAACCCTATCAT+TGG | 0.494354 | 8.2:-10191705 | MS.gene26777:CDS |
| GAAAAGTATGAAAAGGGAAA+GGG | 0.494371 | 8.2:-10204416 | MS.gene26777:CDS |
| GGTGATATGTTAAAAGAGAA+GGG | 0.498936 | 8.2:-10188933 | MS.gene26777:CDS |
| ATCCCGGGAATATCCCGAAC+TGG | 0.501889 | 8.2:+10188104 | None:intergenic |
| GAGAAGGGATTTAATTACCA+TGG | 0.504175 | 8.2:-10188918 | MS.gene26777:CDS |
| CATGCTTGCCAAACCAGTAA+AGG | 0.504843 | 8.2:-10188047 | MS.gene26777:CDS |
| TAAATTGTAATCAGATGCCC+AGG | 0.505628 | 8.2:+10203401 | None:intergenic |
| ACTATAGCGTTTGTGCCTGT+TGG | 0.506362 | 8.2:+10195843 | None:intergenic |
| ACAGTCAATATAAGCAGGTT+CGG | 0.506622 | 8.2:+10193995 | None:intergenic |
| AAAAGTTCAACCGTTCAGCC+TGG | 0.506822 | 8.2:+10198464 | None:intergenic |
| TTGGGCCTGTTTATTATCAA+CGG | 0.508733 | 8.2:-10188839 | MS.gene26777:CDS |
| TGGTGATATGTTAAAAGAGA+AGG | 0.511185 | 8.2:-10188934 | MS.gene26777:CDS |
| GTAAGAACTTCAGGTGGTCC+AGG | 0.511271 | 8.2:+10196934 | None:intergenic |
| AATATATCAATTCCCTCCAA+TGG | 0.512239 | 8.2:-10196621 | MS.gene26777:CDS |
| CGTAATGGGAGCGCAAGGCT+TGG | 0.512362 | 8.2:-10204771 | MS.gene26777:CDS |
| AAGGGGATGTGAAGAGGTAG+AGG | 0.512648 | 8.2:+10196667 | None:intergenic |
| AGTGGAACCTGGATCCAAAT+CGG | 0.512784 | 8.2:-10188976 | MS.gene26777:CDS |
| TGTATCACTTTCAGATGATA+GGG | 0.514438 | 8.2:-10194088 | MS.gene26777:intron |
| TGAAAAGTATGAAAAGGGAA+AGG | 0.521308 | 8.2:-10204417 | MS.gene26777:CDS |
| CCCCATCAGGTGTGTGAACA+GGG | 0.523117 | 8.2:+10198235 | None:intergenic |
| GAAAGTTTCATCTGCTGCAG+TGG | 0.524951 | 8.2:-10196833 | MS.gene26777:intron |
| CGGTGTCCTGACGGTGGAGA+TGG | 0.526434 | 8.2:-10196417 | MS.gene26777:CDS |
| TATGCACTTGTGCGAACGAT+GGG | 0.526924 | 8.2:+10195891 | None:intergenic |
| CCGGAAACTTGTGTCCTACA+AGG | 0.527041 | 8.2:-10206124 | MS.gene26777:CDS |
| AAGTTCATTTAGTGAGAGGC+GGG | 0.528625 | 8.2:-10205534 | MS.gene26777:CDS |
| GTTCTGTACAGTGGGGTCTA+CGG | 0.528641 | 8.2:-10188888 | MS.gene26777:CDS |
| AAGAGGCATCGGAAATGGGC+GGG | 0.530360 | 8.2:-10206101 | MS.gene26777:intron |
| CAATCTCAATTAAAATGTTG+AGG | 0.530764 | 8.2:+10196989 | None:intergenic |
| TGACACTGGTACATATTTCG+TGG | 0.531009 | 8.2:+10196291 | None:intergenic |
| ATGACTCTCAAGCTAAGTAA+TGG | 0.532155 | 8.2:-10187954 | MS.gene26777:CDS |
| TGTCCTTCGATTGATTCCGA+TGG | 0.533261 | 8.2:-10194193 | MS.gene26777:CDS |
| GATTCCAGATGATCTGGAAG+TGG | 0.536614 | 8.2:-10196727 | MS.gene26777:CDS |
| TAATCACGTCAAGAAAGTCT+TGG | 0.538125 | 8.2:-10201887 | MS.gene26777:CDS |
| TATGTTCCTTTGAGCATGGG+TGG | 0.540180 | 8.2:-10196702 | MS.gene26777:CDS |
| GAGGATTTATAATGAGATCT+GGG | 0.544658 | 8.2:+10191589 | None:intergenic |
| TATGTTGACAACTGGAAGGT+TGG | 0.546247 | 8.2:-10201824 | MS.gene26777:CDS |
| TCGGTCAGTGGTGTCAATGA+GGG | 0.548017 | 8.2:+10204472 | None:intergenic |
| TTATCAACGGCTTCGTCACA+TGG | 0.548246 | 8.2:-10188826 | MS.gene26777:CDS |
| TAAAAGGACGAAAGCGTGGT+GGG | 0.548495 | 8.2:-10188289 | MS.gene26777:CDS |
| AGTAGTAGACATGGGCAGAA+AGG | 0.551330 | 8.2:-10191672 | MS.gene26777:CDS |
| GGCAAAACTAGAAGAGTGGC+TGG | 0.552035 | 8.2:-10202192 | MS.gene26777:CDS |
| TATACCTCTGGATCTGCCTC+AGG | 0.553166 | 8.2:-10201794 | MS.gene26777:intron |
| GGATATGTTCCTTTGAGCAT+GGG | 0.554810 | 8.2:-10196705 | MS.gene26777:CDS |
| ACTATTGACTTGACAGAGCT+AGG | 0.555281 | 8.2:-10194271 | MS.gene26777:CDS |
| ACTTTCTCAACCTCAGTGGA+AGG | 0.556456 | 8.2:+10196877 | None:intergenic |
| TACATAAATTTCTCGGTCAG+TGG | 0.557275 | 8.2:+10204460 | None:intergenic |
| CACCAATGATAGGGTTTCGA+GGG | 0.557355 | 8.2:+10191703 | None:intergenic |
| ACTAGAAGAGTGGCTGGCGA+AGG | 0.558079 | 8.2:-10202186 | MS.gene26777:CDS |
| ATCTAGAAGGGGATGTGAAG+AGG | 0.561686 | 8.2:+10196661 | None:intergenic |
| CGTGATTCTCTACTAGCACA+TGG | 0.564313 | 8.2:-10188242 | MS.gene26777:CDS |
| CTAGAAGAGTGGCTGGCGAA+GGG | 0.566149 | 8.2:-10202185 | MS.gene26777:CDS |
| TTCATTTCCTGCAACTCATG+AGG | 0.567143 | 8.2:-10196382 | MS.gene26777:CDS |
| CTCGGTCAGTGGTGTCAATG+AGG | 0.567179 | 8.2:+10204471 | None:intergenic |
| TTGACGAGATTAAAAGAGGA+GGG | 0.567281 | 8.2:-10202148 | MS.gene26777:CDS |
| TCCGATGGACTTCCACATGT+TGG | 0.567981 | 8.2:-10194178 | MS.gene26777:CDS |
| ACGTCGTTCTATGATTCTCA+AGG | 0.568610 | 8.2:-10197048 | MS.gene26777:CDS |
| GGCCAGTTCGGGATATTCCC+GGG | 0.569571 | 8.2:-10188106 | MS.gene26777:CDS |
| ACCAACATGTGGAAGTCCAT+CGG | 0.570724 | 8.2:+10194177 | None:intergenic |
| TCACCAATGATAGGGTTTCG+AGG | 0.570830 | 8.2:+10191702 | None:intergenic |
| AAAGGACGAAAGCGTGGTGG+GGG | 0.571277 | 8.2:-10188287 | MS.gene26777:CDS |
| CTGGGCGAATAAATCTAGAA+GGG | 0.573428 | 8.2:+10196649 | None:intergenic |
| AGCAACAGATTCCAAAAGCA+TGG | 0.573677 | 8.2:+10191539 | None:intergenic |
| ACCTTCGTAATGGGAGCGCA+AGG | 0.573683 | 8.2:-10204776 | MS.gene26777:CDS |
| GGGATATGTTCCTTTGAGCA+TGG | 0.573702 | 8.2:-10196706 | MS.gene26777:CDS |
| GTCCTACAAGGAAGAGGCAT+CGG | 0.576712 | 8.2:-10206112 | MS.gene26777:CDS |
| GAATTGATATATTTCTCACT+GGG | 0.577869 | 8.2:+10196631 | None:intergenic |
| ATATCTAAATATATAAGGCA+TGG | 0.581059 | 8.2:+10188010 | None:intergenic |
| GATGTGAAGAGGTAGAGGCC+AGG | 0.584083 | 8.2:+10196672 | None:intergenic |
| TGCGAAGTTCATTTAGTGAG+AGG | 0.589204 | 8.2:-10205538 | MS.gene26777:CDS |
| GCTACACAGTCAATATAAGC+AGG | 0.591404 | 8.2:+10193990 | None:intergenic |
| ACTTGTGTCCTACAAGGAAG+AGG | 0.591750 | 8.2:-10206118 | MS.gene26777:CDS |
| GCTCTTCTTACTGGTATCCC+GGG | 0.593285 | 8.2:+10188089 | None:intergenic |
| GATGTGAAGTTCTGTACAGT+GGG | 0.593964 | 8.2:-10188896 | MS.gene26777:CDS |
| AAGAGAGTACATGCTTCCTG+TGG | 0.595392 | 8.2:-10204609 | MS.gene26777:CDS |
| GACAAATTTAGTAGTAGACA+TGG | 0.596142 | 8.2:-10191681 | MS.gene26777:CDS |
| TGTACAGAACTTCACATCCA+TGG | 0.597792 | 8.2:+10188901 | None:intergenic |
| ACTTGAGAGACTTTCCTCCC+CGG | 0.598961 | 8.2:-10206143 | MS.gene26777:CDS |
| AAGGTGTTTGCTCTCAGTTG+TGG | 0.599266 | 8.2:-10191653 | MS.gene26777:CDS |
| CCAATAAAAGGACGAAAGCG+TGG | 0.605899 | 8.2:-10188293 | MS.gene26777:CDS |
| GAAGAGGCATCGGAAATGGG+CGG | 0.605929 | 8.2:-10206102 | MS.gene26777:CDS |
| TCATTTAGTGAGAGGCGGGA+AGG | 0.606069 | 8.2:-10205530 | MS.gene26777:CDS |
| CTTGACGAGATTAAAAGAGG+AGG | 0.606806 | 8.2:-10202149 | MS.gene26777:CDS |
| GTGCGAACGATGGGAGTCTG+AGG | 0.606834 | 8.2:+10195900 | None:intergenic |
| ACTACACTTAGCATTCCTGT+TGG | 0.608391 | 8.2:+10196351 | None:intergenic |
| TATGCTCCACCCATGCTCAA+AGG | 0.608670 | 8.2:+10196696 | None:intergenic |
| TGTAGATCAGACATCAGTGC+CGG | 0.608947 | 8.2:-10203462 | MS.gene26777:CDS |
| AAAAGGACGAAAGCGTGGTG+GGG | 0.608956 | 8.2:-10188288 | MS.gene26777:CDS |
| CCTGTTCACACACCTGATGG+GGG | 0.614042 | 8.2:-10198234 | MS.gene26777:CDS |
| TTGTTGAAGATCGTTCTGCT+TGG | 0.614101 | 8.2:+10194245 | None:intergenic |
| GAAGTTCATTTAGTGAGAGG+CGG | 0.614172 | 8.2:-10205535 | MS.gene26777:CDS |
| ATTCCAGATGATCTGGAAGT+GGG | 0.615109 | 8.2:-10196726 | MS.gene26777:CDS |
| GCTTAACACTCCAGGCTGAA+CGG | 0.615451 | 8.2:-10198474 | MS.gene26777:CDS |
| GAACTTCGCACTGTACTCAT+CGG | 0.618330 | 8.2:+10205551 | None:intergenic |
| GACACTGGTACATATTTCGT+GGG | 0.621932 | 8.2:+10196292 | None:intergenic |
| ATGGAGATACGGTGTCCTGA+CGG | 0.623427 | 8.2:-10196426 | MS.gene26777:CDS |
| CTTTCTCAACCTCAGTGGAA+GGG | 0.624496 | 8.2:+10196878 | None:intergenic |
| TGTCCTGACGGTGGAGATGG+TGG | 0.625850 | 8.2:-10196414 | MS.gene26777:CDS |
| TAGGTCGAATACATCTCTCA+AGG | 0.626077 | 8.2:+10205796 | None:intergenic |
| CGGCAAATAAGGCACCTCGA+TGG | 0.627999 | 8.2:+10198413 | None:intergenic |
| CATATGCAGATATGATATGG+AGG | 0.628297 | 8.2:-10195731 | MS.gene26777:intron |
| TTGCCAAAGATATTTCTACC+TGG | 0.629358 | 8.2:-10196952 | MS.gene26777:CDS |
| TAGAAGAGTGGCTGGCGAAG+GGG | 0.632445 | 8.2:-10202184 | MS.gene26777:CDS |
| TGACAAACCTGACCAACATG+TGG | 0.635400 | 8.2:+10194166 | None:intergenic |
| TGATAGCTTGCAAAATCAGG+AGG | 0.636823 | 8.2:-10203432 | MS.gene26777:CDS |
| AACTCCATTTCGTAGTTCAG+TGG | 0.638842 | 8.2:-10188994 | MS.gene26777:CDS |
| ATATGCACTTGTGCGAACGA+TGG | 0.638963 | 8.2:+10195890 | None:intergenic |
| ACCTTCAAAAGAATGCCCAC+AGG | 0.639312 | 8.2:+10204593 | None:intergenic |
| GCACTGTTGACCAGATAACC+CGG | 0.641974 | 8.2:-10188319 | MS.gene26777:CDS |
| AAGATTGTCGAACCTGACAC+TGG | 0.642233 | 8.2:+10196277 | None:intergenic |
| CATGGTTTCAGACAAATACC+AGG | 0.642270 | 8.2:-10188808 | MS.gene26777:intron |
| AGAGAGTACATGCTTCCTGT+GGG | 0.642359 | 8.2:-10204608 | MS.gene26777:CDS |
| ATAAAGTTTCACCGTTAACG+AGG | 0.643788 | 8.2:+10204800 | None:intergenic |
| TTGCCAAACCAGTAAAGGCA+TGG | 0.647104 | 8.2:-10188042 | MS.gene26777:CDS |
| TGATTCTCTACTAGCACATG+GGG | 0.650364 | 8.2:-10188240 | MS.gene26777:CDS |
| AGTCCATCGGAATCAATCGA+AGG | 0.652605 | 8.2:+10194190 | None:intergenic |
| ATAGATGGCAAAGCAAACAA+TGG | 0.652760 | 8.2:-10196189 | MS.gene26777:intron |
| CCTAGGCAAAACTAGAAGAG+TGG | 0.652979 | 8.2:-10202196 | MS.gene26777:intron |
| GTGATTCTCTACTAGCACAT+GGG | 0.654450 | 8.2:-10188241 | MS.gene26777:CDS |
| CATTCATTGAGCCTCAAAAG+CGG | 0.654657 | 8.2:-10188127 | MS.gene26777:CDS |
| AACAAGTCGTCTGTAGAACG+TGG | 0.654955 | 8.2:-10195694 | MS.gene26777:CDS |
| TGGGCGAATAAATCTAGAAG+GGG | 0.662753 | 8.2:+10196650 | None:intergenic |
| CATACCTGAGGCAGATCCAG+AGG | 0.663126 | 8.2:+10201790 | None:intergenic |
| TTGTAGGACACAAGTTTCCG+GGG | 0.664625 | 8.2:+10206126 | None:intergenic |
| CTCGGGCAATAGCTTCCGCA+CGG | 0.667015 | 8.2:+10198375 | None:intergenic |
| ATCCTAGAAGGAAATGCATG+AGG | 0.669093 | 8.2:+10191570 | None:intergenic |
| TGGTTATATCCCTTCCACTG+AGG | 0.672040 | 8.2:-10196887 | MS.gene26777:CDS |
| GAGATACGGTGTCCTGACGG+TGG | 0.674317 | 8.2:-10196423 | MS.gene26777:CDS |
| GCCTTGCGCTCCCATTACGA+AGG | 0.676433 | 8.2:+10204775 | None:intergenic |
| ACAAATTTAGTAGTAGACAT+GGG | 0.676927 | 8.2:-10191680 | MS.gene26777:CDS |
| AAAGTATGTTGACAACTGGA+AGG | 0.677218 | 8.2:-10201828 | MS.gene26777:CDS |
| CTCTGATTATGATCTGACCA+AGG | 0.679396 | 8.2:+10196315 | None:intergenic |
| TAGTTGCTAATCTTACACCT+TGG | 0.679476 | 8.2:-10196332 | MS.gene26777:CDS |
| ATAAAAGGACGAAAGCGTGG+TGG | 0.684155 | 8.2:-10188290 | MS.gene26777:CDS |
| GGATGTGAAGTTCTGTACAG+TGG | 0.689488 | 8.2:-10188897 | MS.gene26777:CDS |
| ATATGATTCAACAATCCACA+TGG | 0.700563 | 8.2:+10198210 | None:intergenic |
| AGAACAGTAAGAACTTCAGG+TGG | 0.704017 | 8.2:+10196928 | None:intergenic |
| TAGGACACAAGTTTCCGGGG+AGG | 0.715281 | 8.2:+10206129 | None:intergenic |
| GACAACTTTCTCAACCTCAG+TGG | 0.722219 | 8.2:+10196873 | None:intergenic |
| AAATTGTAATCAGATGCCCA+GGG | 0.727412 | 8.2:+10203402 | None:intergenic |
| GACTTCGTACTACAACCGTG+CGG | 0.836314 | 8.2:-10198390 | MS.gene26777:CDS |
| ATGTGAAGTTCTGTACAGTG+GGG | 0.840739 | 8.2:-10188895 | MS.gene26777:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 10187926 | 10206184 | 10187926 | ID=MS.gene26777 |
| chr8.2 | mRNA | 10187926 | 10206184 | 10187926 | ID=MS.gene26777.t1;Parent=MS.gene26777 |
| chr8.2 | exon | 10206102 | 10206184 | 10206102 | ID=MS.gene26777.t1.exon1;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10206102 | 10206184 | 10206102 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10205773 | 10205836 | 10205773 | ID=MS.gene26777.t1.exon2;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10205773 | 10205836 | 10205773 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10205503 | 10205573 | 10205503 | ID=MS.gene26777.t1.exon3;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10205503 | 10205573 | 10205503 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10204765 | 10204842 | 10204765 | ID=MS.gene26777.t1.exon4;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10204765 | 10204842 | 10204765 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10204595 | 10204640 | 10204595 | ID=MS.gene26777.t1.exon5;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10204595 | 10204640 | 10204595 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10204315 | 10204495 | 10204315 | ID=MS.gene26777.t1.exon6;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10204315 | 10204495 | 10204315 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10204187 | 10204239 | 10204187 | ID=MS.gene26777.t1.exon7;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10204187 | 10204239 | 10204187 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10203679 | 10203752 | 10203679 | ID=MS.gene26777.t1.exon8;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10203679 | 10203752 | 10203679 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10203394 | 10203511 | 10203394 | ID=MS.gene26777.t1.exon9;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10203394 | 10203511 | 10203394 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10202108 | 10202213 | 10202108 | ID=MS.gene26777.t1.exon10;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10202108 | 10202213 | 10202108 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10201795 | 10201910 | 10201795 | ID=MS.gene26777.t1.exon11;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10201795 | 10201910 | 10201795 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10198376 | 10198503 | 10198376 | ID=MS.gene26777.t1.exon12;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10198376 | 10198503 | 10198376 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10198196 | 10198275 | 10198196 | ID=MS.gene26777.t1.exon13;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10198196 | 10198275 | 10198196 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10196834 | 10197075 | 10196834 | ID=MS.gene26777.t1.exon14;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10196834 | 10197075 | 10196834 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10196584 | 10196748 | 10196584 | ID=MS.gene26777.t1.exon15;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10196584 | 10196748 | 10196584 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10196290 | 10196454 | 10196290 | ID=MS.gene26777.t1.exon16;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10196290 | 10196454 | 10196290 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10196133 | 10196207 | 10196133 | ID=MS.gene26777.t1.exon17;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10196133 | 10196207 | 10196133 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10195822 | 10195925 | 10195822 | ID=MS.gene26777.t1.exon18;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10195822 | 10195925 | 10195822 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10195669 | 10195744 | 10195669 | ID=MS.gene26777.t1.exon19;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10195669 | 10195744 | 10195669 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10194174 | 10194299 | 10194174 | ID=MS.gene26777.t1.exon20;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10194174 | 10194299 | 10194174 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10193962 | 10194096 | 10193962 | ID=MS.gene26777.t1.exon21;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10193962 | 10194096 | 10193962 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10191533 | 10191745 | 10191533 | ID=MS.gene26777.t1.exon22;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10191533 | 10191745 | 10191533 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10188809 | 10189048 | 10188809 | ID=MS.gene26777.t1.exon23;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10188809 | 10189048 | 10188809 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| chr8.2 | exon | 10187926 | 10188354 | 10187926 | ID=MS.gene26777.t1.exon24;Parent=MS.gene26777.t1 |
| chr8.2 | CDS | 10187926 | 10188354 | 10187926 | ID=cds.MS.gene26777.t1;Parent=MS.gene26777.t1 |
| Gene Sequence |
| Protein sequence |