Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038655.t1 | XP_003628628.1 | 95.4 | 329 | 15 | 0 | 1 | 329 | 1 | 329 | 1.90E-177 | 631.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038655.t1 | Q9FJR1 | 57.1 | 322 | 130 | 2 | 10 | 327 | 16 | 333 | 2.0e-103 | 377.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038655.t1 | G7LEQ9 | 95.4 | 329 | 15 | 0 | 1 | 329 | 1 | 329 | 1.4e-177 | 631.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene027436 | MS.gene038655 | PPI |
MS.gene038655 | MS.gene071108 | PPI |
MS.gene35795 | MS.gene038655 | PPI |
MS.gene80170 | MS.gene038655 | PPI |
MS.gene029047 | MS.gene038655 | PPI |
MS.gene014924 | MS.gene038655 | PPI |
MS.gene51331 | MS.gene038655 | PPI |
MS.gene32715 | MS.gene038655 | PPI |
MS.gene87222 | MS.gene038655 | PPI |
MS.gene35931 | MS.gene038655 | PPI |
MS.gene35853 | MS.gene038655 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038655.t1 | MTR_8g062780 | 95.441 | 329 | 15 | 0 | 1 | 329 | 1 | 329 | 0.0 | 652 |
MS.gene038655.t1 | MTR_1g090760 | 54.079 | 331 | 147 | 2 | 3 | 328 | 4 | 334 | 4.45e-136 | 390 |
MS.gene038655.t1 | MTR_0286s0010 | 53.226 | 310 | 142 | 2 | 16 | 324 | 27 | 334 | 4.69e-125 | 362 |
MS.gene038655.t1 | MTR_6g008075 | 53.226 | 310 | 142 | 2 | 16 | 324 | 27 | 334 | 4.69e-125 | 362 |
MS.gene038655.t1 | MTR_7g029030 | 45.079 | 315 | 167 | 3 | 10 | 324 | 12 | 320 | 1.30e-95 | 286 |
MS.gene038655.t1 | MTR_5g016010 | 45.066 | 304 | 164 | 2 | 19 | 320 | 23 | 325 | 3.94e-92 | 278 |
MS.gene038655.t1 | MTR_4g095450 | 43.810 | 315 | 168 | 4 | 11 | 323 | 16 | 323 | 2.62e-88 | 268 |
MS.gene038655.t1 | MTR_1g009750 | 43.082 | 318 | 176 | 4 | 10 | 324 | 13 | 328 | 3.20e-87 | 265 |
MS.gene038655.t1 | MTR_4g087965 | 42.587 | 317 | 173 | 4 | 12 | 320 | 27 | 342 | 4.25e-86 | 263 |
MS.gene038655.t1 | MTR_4g127670 | 43.189 | 301 | 165 | 3 | 22 | 320 | 23 | 319 | 2.06e-83 | 255 |
MS.gene038655.t1 | MTR_1g101830 | 41.379 | 319 | 179 | 5 | 8 | 324 | 10 | 322 | 8.01e-83 | 254 |
MS.gene038655.t1 | MTR_4g046713 | 39.748 | 317 | 186 | 4 | 10 | 324 | 13 | 326 | 8.96e-79 | 243 |
MS.gene038655.t1 | MTR_1g009750 | 40.506 | 316 | 170 | 5 | 10 | 324 | 13 | 311 | 1.33e-76 | 237 |
MS.gene038655.t1 | MTR_5g022870 | 41.509 | 318 | 168 | 8 | 13 | 324 | 11 | 316 | 3.07e-75 | 234 |
MS.gene038655.t1 | MTR_1g077000 | 42.809 | 299 | 158 | 5 | 26 | 324 | 42 | 327 | 5.42e-75 | 234 |
MS.gene038655.t1 | MTR_5g021060 | 41.447 | 304 | 175 | 3 | 23 | 325 | 30 | 331 | 7.66e-75 | 233 |
MS.gene038655.t1 | MTR_7g107520 | 40.000 | 315 | 182 | 5 | 10 | 324 | 13 | 320 | 1.66e-74 | 232 |
MS.gene038655.t1 | MTR_1g025980 | 41.066 | 319 | 169 | 9 | 10 | 321 | 9 | 315 | 1.00e-72 | 228 |
MS.gene038655.t1 | MTR_4g122640 | 41.368 | 307 | 175 | 4 | 19 | 324 | 34 | 336 | 1.31e-72 | 228 |
MS.gene038655.t1 | MTR_2g008710 | 40.432 | 324 | 177 | 6 | 10 | 324 | 9 | 325 | 2.24e-72 | 227 |
MS.gene038655.t1 | MTR_0155s0040 | 40.064 | 312 | 168 | 5 | 16 | 324 | 20 | 315 | 5.83e-72 | 226 |
MS.gene038655.t1 | MTR_8g075100 | 39.869 | 306 | 176 | 5 | 19 | 324 | 22 | 319 | 5.96e-72 | 226 |
MS.gene038655.t1 | MTR_8g076820 | 39.623 | 318 | 188 | 4 | 8 | 324 | 16 | 330 | 1.04e-71 | 226 |
MS.gene038655.t1 | MTR_2g088770 | 36.164 | 318 | 196 | 6 | 10 | 325 | 14 | 326 | 1.04e-68 | 218 |
MS.gene038655.t1 | MTR_4g114210 | 40.625 | 320 | 178 | 5 | 10 | 324 | 8 | 320 | 3.07e-68 | 216 |
MS.gene038655.t1 | MTR_3g092990 | 40.000 | 305 | 182 | 1 | 20 | 324 | 23 | 326 | 7.43e-68 | 216 |
MS.gene038655.t1 | MTR_2g040000 | 40.453 | 309 | 175 | 5 | 22 | 325 | 28 | 332 | 2.75e-67 | 214 |
MS.gene038655.t1 | MTR_4g132490 | 36.774 | 310 | 191 | 3 | 16 | 324 | 22 | 327 | 3.78e-67 | 214 |
MS.gene038655.t1 | MTR_2g029830 | 38.462 | 312 | 184 | 4 | 21 | 328 | 26 | 333 | 5.16e-67 | 214 |
MS.gene038655.t1 | MTR_2g029815 | 37.267 | 322 | 190 | 5 | 11 | 324 | 13 | 330 | 7.45e-67 | 214 |
MS.gene038655.t1 | MTR_2g029560 | 35.127 | 316 | 201 | 3 | 11 | 324 | 12 | 325 | 3.83e-66 | 212 |
MS.gene038655.t1 | MTR_6g043460 | 36.877 | 301 | 179 | 4 | 26 | 325 | 39 | 329 | 5.49e-66 | 211 |
MS.gene038655.t1 | MTR_7g093370 | 37.383 | 321 | 196 | 4 | 7 | 324 | 53 | 371 | 6.05e-66 | 212 |
MS.gene038655.t1 | MTR_6g027440 | 37.778 | 315 | 186 | 5 | 10 | 324 | 10 | 314 | 2.23e-65 | 209 |
MS.gene038655.t1 | MTR_1g038680 | 38.206 | 301 | 182 | 3 | 27 | 324 | 33 | 332 | 3.35e-65 | 209 |
MS.gene038655.t1 | MTR_4g125940 | 38.835 | 309 | 181 | 4 | 20 | 324 | 25 | 329 | 3.80e-65 | 209 |
MS.gene038655.t1 | MTR_2g084090 | 36.364 | 319 | 191 | 4 | 10 | 324 | 8 | 318 | 4.10e-65 | 208 |
MS.gene038655.t1 | MTR_2g029820 | 36.842 | 323 | 195 | 5 | 6 | 324 | 13 | 330 | 4.77e-65 | 209 |
MS.gene038655.t1 | MTR_4g030890 | 38.762 | 307 | 183 | 4 | 19 | 325 | 96 | 397 | 1.21e-64 | 210 |
MS.gene038655.t1 | MTR_4g132110 | 37.224 | 317 | 190 | 3 | 10 | 324 | 19 | 328 | 1.23e-64 | 207 |
MS.gene038655.t1 | MTR_5g014100 | 37.580 | 314 | 176 | 5 | 23 | 324 | 26 | 331 | 1.33e-64 | 207 |
MS.gene038655.t1 | MTR_7g072510 | 37.421 | 318 | 189 | 4 | 7 | 324 | 5 | 312 | 1.95e-64 | 206 |
MS.gene038655.t1 | MTR_2g029730 | 35.331 | 317 | 201 | 3 | 10 | 324 | 12 | 326 | 2.15e-64 | 207 |
MS.gene038655.t1 | MTR_3g094650 | 36.977 | 311 | 188 | 5 | 10 | 320 | 16 | 318 | 3.09e-64 | 206 |
MS.gene038655.t1 | MTR_2g029800 | 36.129 | 310 | 190 | 4 | 19 | 324 | 25 | 330 | 4.35e-64 | 206 |
MS.gene038655.t1 | MTR_2g084080 | 36.392 | 316 | 188 | 5 | 13 | 324 | 11 | 317 | 5.00e-64 | 205 |
MS.gene038655.t1 | MTR_1g054205 | 37.421 | 318 | 194 | 4 | 10 | 324 | 11 | 326 | 5.46e-64 | 206 |
MS.gene038655.t1 | MTR_2g029860 | 35.185 | 324 | 196 | 5 | 11 | 324 | 11 | 330 | 5.69e-64 | 206 |
MS.gene038655.t1 | MTR_4g029170 | 37.846 | 325 | 190 | 6 | 3 | 324 | 6 | 321 | 6.31e-64 | 205 |
MS.gene038655.t1 | MTR_1g086320 | 39.274 | 303 | 176 | 4 | 27 | 324 | 34 | 333 | 6.93e-64 | 206 |
MS.gene038655.t1 | MTR_3g072190 | 36.957 | 322 | 189 | 4 | 8 | 324 | 6 | 318 | 7.11e-64 | 205 |
MS.gene038655.t1 | MTR_7g072480 | 37.771 | 323 | 190 | 4 | 2 | 324 | 5 | 316 | 7.97e-64 | 205 |
MS.gene038655.t1 | MTR_2g028980 | 37.217 | 309 | 188 | 4 | 19 | 324 | 25 | 330 | 8.85e-64 | 206 |
MS.gene038655.t1 | MTR_2g084110 | 36.278 | 317 | 187 | 6 | 13 | 324 | 11 | 317 | 1.65e-63 | 204 |
MS.gene038655.t1 | MTR_4g031140 | 36.774 | 310 | 185 | 4 | 18 | 324 | 23 | 324 | 2.10e-63 | 204 |
MS.gene038655.t1 | MTR_7g086820 | 37.874 | 301 | 178 | 4 | 27 | 327 | 24 | 315 | 3.53e-63 | 203 |
MS.gene038655.t1 | MTR_2g029850 | 36.129 | 310 | 190 | 4 | 19 | 324 | 25 | 330 | 5.63e-63 | 204 |
MS.gene038655.t1 | MTR_2g029750 | 36.728 | 324 | 194 | 6 | 6 | 324 | 13 | 330 | 6.34e-63 | 204 |
MS.gene038655.t1 | MTR_7g086870 | 38.462 | 299 | 172 | 4 | 27 | 325 | 26 | 312 | 7.12e-63 | 202 |
MS.gene038655.t1 | MTR_1g086490 | 38.835 | 309 | 176 | 4 | 27 | 324 | 34 | 340 | 8.41e-63 | 203 |
MS.gene038655.t1 | MTR_4g133800 | 39.404 | 302 | 170 | 7 | 27 | 326 | 45 | 335 | 1.62e-62 | 202 |
MS.gene038655.t1 | MTR_5g017850 | 36.076 | 316 | 199 | 3 | 10 | 324 | 13 | 326 | 2.13e-62 | 201 |
MS.gene038655.t1 | MTR_5g074970 | 38.154 | 325 | 181 | 7 | 10 | 324 | 12 | 326 | 2.15e-62 | 201 |
MS.gene038655.t1 | MTR_4g132110 | 36.646 | 322 | 190 | 4 | 10 | 324 | 19 | 333 | 3.66e-62 | 201 |
MS.gene038655.t1 | MTR_4g029190 | 40.328 | 305 | 174 | 5 | 21 | 324 | 43 | 340 | 6.30e-62 | 201 |
MS.gene038655.t1 | MTR_1g066380 | 38.562 | 306 | 179 | 3 | 21 | 324 | 25 | 323 | 7.94e-62 | 200 |
MS.gene038655.t1 | MTR_4g083710 | 37.812 | 320 | 189 | 5 | 8 | 324 | 12 | 324 | 1.42e-61 | 199 |
MS.gene038655.t1 | MTR_1g066710 | 38.762 | 307 | 179 | 3 | 20 | 324 | 24 | 323 | 2.82e-61 | 198 |
MS.gene038655.t1 | MTR_5g083860 | 35.962 | 317 | 196 | 4 | 8 | 324 | 16 | 325 | 6.11e-61 | 197 |
MS.gene038655.t1 | MTR_5g074760 | 38.769 | 325 | 181 | 7 | 8 | 324 | 7 | 321 | 7.56e-61 | 197 |
MS.gene038655.t1 | MTR_1g115900 | 37.805 | 328 | 186 | 7 | 5 | 324 | 4 | 321 | 7.91e-61 | 197 |
MS.gene038655.t1 | MTR_2g437770 | 37.209 | 301 | 175 | 7 | 26 | 324 | 53 | 341 | 1.63e-60 | 197 |
MS.gene038655.t1 | MTR_2g029910 | 35.256 | 312 | 195 | 3 | 19 | 326 | 26 | 334 | 2.00e-60 | 197 |
MS.gene038655.t1 | MTR_3g092990 | 38.689 | 305 | 175 | 2 | 20 | 324 | 23 | 315 | 3.05e-60 | 196 |
MS.gene038655.t1 | MTR_5g074740 | 38.532 | 327 | 183 | 7 | 8 | 326 | 7 | 323 | 5.76e-60 | 195 |
MS.gene038655.t1 | MTR_1g066640 | 37.785 | 307 | 182 | 3 | 20 | 324 | 24 | 323 | 8.31e-60 | 195 |
MS.gene038655.t1 | MTR_5g017860 | 34.177 | 316 | 205 | 3 | 10 | 324 | 13 | 326 | 1.33e-59 | 194 |
MS.gene038655.t1 | MTR_2g084010 | 35.647 | 317 | 193 | 6 | 10 | 324 | 11 | 318 | 3.39e-59 | 193 |
MS.gene038655.t1 | MTR_2g084000 | 33.962 | 318 | 200 | 4 | 8 | 324 | 11 | 319 | 4.05e-59 | 192 |
MS.gene038655.t1 | MTR_4g029180 | 37.209 | 301 | 178 | 5 | 26 | 324 | 30 | 321 | 4.14e-59 | 193 |
MS.gene038655.t1 | MTR_3g466200 | 36.025 | 322 | 196 | 4 | 5 | 324 | 7 | 320 | 5.38e-59 | 192 |
MS.gene038655.t1 | MTR_2g029740 | 34.985 | 323 | 201 | 5 | 6 | 324 | 13 | 330 | 1.21e-58 | 192 |
MS.gene038655.t1 | MTR_4g125940 | 41.328 | 271 | 151 | 4 | 58 | 324 | 8 | 274 | 1.35e-58 | 190 |
MS.gene038655.t1 | MTR_2g084020 | 34.700 | 317 | 193 | 6 | 13 | 324 | 11 | 318 | 2.55e-58 | 191 |
MS.gene038655.t1 | MTR_5g049280 | 33.441 | 311 | 200 | 5 | 19 | 324 | 29 | 337 | 3.26e-58 | 191 |
MS.gene038655.t1 | MTR_3g466180 | 38.170 | 317 | 187 | 3 | 8 | 324 | 16 | 323 | 3.82e-58 | 190 |
MS.gene038655.t1 | MTR_3g467600 | 36.728 | 324 | 189 | 7 | 8 | 324 | 10 | 324 | 5.03e-58 | 190 |
MS.gene038655.t1 | MTR_4g074995 | 36.792 | 318 | 182 | 4 | 8 | 324 | 9 | 308 | 5.70e-58 | 189 |
MS.gene038655.t1 | MTR_6g043240 | 35.570 | 298 | 180 | 4 | 27 | 324 | 46 | 331 | 1.03e-57 | 190 |
MS.gene038655.t1 | MTR_2g008730 | 37.417 | 302 | 154 | 5 | 27 | 324 | 31 | 301 | 1.37e-57 | 188 |
MS.gene038655.t1 | MTR_7g026990 | 37.458 | 299 | 175 | 5 | 27 | 324 | 35 | 322 | 1.38e-57 | 189 |
MS.gene038655.t1 | MTR_4g029200 | 38.158 | 304 | 179 | 3 | 21 | 324 | 44 | 338 | 1.64e-57 | 189 |
MS.gene038655.t1 | MTR_6g043280 | 35.452 | 299 | 183 | 4 | 26 | 324 | 44 | 332 | 2.49e-57 | 189 |
MS.gene038655.t1 | MTR_5g033470 | 34.967 | 306 | 186 | 6 | 27 | 324 | 77 | 377 | 2.65e-57 | 190 |
MS.gene038655.t1 | MTR_5g074710 | 36.909 | 317 | 185 | 6 | 15 | 326 | 17 | 323 | 4.59e-57 | 187 |
MS.gene038655.t1 | MTR_1g022970 | 37.500 | 304 | 186 | 3 | 23 | 324 | 46 | 347 | 1.27e-56 | 187 |
MS.gene038655.t1 | MTR_3g094670 | 36.422 | 313 | 187 | 6 | 10 | 320 | 16 | 318 | 2.07e-56 | 186 |
MS.gene038655.t1 | MTR_5g074860 | 36.634 | 303 | 177 | 7 | 23 | 320 | 29 | 321 | 3.00e-56 | 186 |
MS.gene038655.t1 | MTR_1g066680 | 37.540 | 309 | 179 | 5 | 20 | 324 | 24 | 322 | 1.07e-55 | 184 |
MS.gene038655.t1 | MTR_3g105790 | 34.579 | 321 | 200 | 4 | 7 | 324 | 9 | 322 | 1.11e-55 | 184 |
MS.gene038655.t1 | MTR_2g029830 | 40.000 | 260 | 148 | 4 | 69 | 324 | 6 | 261 | 3.21e-55 | 182 |
MS.gene038655.t1 | MTR_2g077990 | 35.045 | 331 | 182 | 6 | 21 | 320 | 74 | 402 | 1.06e-54 | 184 |
MS.gene038655.t1 | MTR_2g067440 | 34.347 | 329 | 184 | 5 | 21 | 320 | 58 | 383 | 1.36e-54 | 183 |
MS.gene038655.t1 | MTR_3g094630 | 36.170 | 329 | 188 | 7 | 9 | 324 | 3 | 322 | 1.48e-54 | 181 |
MS.gene038655.t1 | MTR_2g078610 | 35.045 | 331 | 182 | 6 | 21 | 320 | 74 | 402 | 2.37e-54 | 183 |
MS.gene038655.t1 | MTR_4g074990 | 34.862 | 327 | 188 | 6 | 1 | 324 | 1 | 305 | 4.37e-54 | 179 |
MS.gene038655.t1 | MTR_3g072190 | 37.838 | 259 | 152 | 3 | 66 | 324 | 2 | 251 | 6.65e-53 | 174 |
MS.gene038655.t1 | MTR_2g078280 | 35.110 | 319 | 174 | 6 | 21 | 308 | 74 | 390 | 1.17e-51 | 176 |
MS.gene038655.t1 | MTR_2g008160 | 35.897 | 312 | 186 | 8 | 19 | 324 | 20 | 323 | 2.71e-51 | 172 |
MS.gene038655.t1 | MTR_2g099175 | 33.441 | 311 | 193 | 6 | 20 | 324 | 33 | 335 | 2.93e-51 | 173 |
MS.gene038655.t1 | MTR_0147s0010 | 35.350 | 314 | 169 | 5 | 26 | 320 | 80 | 378 | 5.47e-51 | 173 |
MS.gene038655.t1 | MTR_1g066380 | 36.965 | 257 | 153 | 3 | 70 | 324 | 6 | 255 | 2.67e-46 | 157 |
MS.gene038655.t1 | MTR_4g074980 | 33.553 | 304 | 170 | 5 | 21 | 324 | 23 | 294 | 3.63e-46 | 158 |
MS.gene038655.t1 | MTR_4g074980 | 37.288 | 236 | 143 | 4 | 21 | 256 | 23 | 253 | 1.03e-45 | 156 |
MS.gene038655.t1 | MTR_2g067450 | 34.641 | 306 | 186 | 7 | 21 | 320 | 9 | 306 | 7.26e-45 | 155 |
MS.gene038655.t1 | MTR_3g105790 | 36.957 | 230 | 140 | 3 | 98 | 324 | 19 | 246 | 6.66e-41 | 143 |
MS.gene038655.t1 | MTR_2g008160 | 32.051 | 312 | 163 | 8 | 19 | 324 | 20 | 288 | 1.28e-38 | 139 |
MS.gene038655.t1 | MTR_5g074700 | 36.797 | 231 | 122 | 5 | 99 | 326 | 7 | 216 | 8.14e-38 | 134 |
MS.gene038655.t1 | MTR_5g074860 | 30.033 | 303 | 158 | 6 | 23 | 320 | 29 | 282 | 8.99e-34 | 125 |
MS.gene038655.t1 | MTR_2g008160 | 38.462 | 182 | 105 | 4 | 19 | 199 | 20 | 195 | 9.73e-33 | 120 |
MS.gene038655.t1 | MTR_3g072210 | 35.751 | 193 | 114 | 4 | 134 | 324 | 54 | 238 | 1.40e-31 | 119 |
MS.gene038655.t1 | MTR_2g029880 | 33.846 | 195 | 112 | 5 | 136 | 326 | 9 | 190 | 3.60e-28 | 108 |
MS.gene038655.t1 | MTR_7g072490 | 32.340 | 235 | 96 | 5 | 69 | 303 | 2 | 173 | 9.03e-26 | 102 |
MS.gene038655.t1 | MTR_5g058120 | 33.529 | 170 | 99 | 3 | 161 | 329 | 8 | 164 | 1.78e-23 | 97.4 |
MS.gene038655.t1 | MTR_2g078560 | 28.311 | 219 | 127 | 3 | 132 | 320 | 98 | 316 | 4.20e-23 | 97.8 |
MS.gene038655.t1 | MTR_7g086790 | 34.969 | 163 | 85 | 3 | 70 | 232 | 17 | 158 | 7.09e-22 | 91.7 |
MS.gene038655.t1 | MTR_3g072260 | 43.363 | 113 | 63 | 1 | 20 | 132 | 23 | 134 | 9.84e-21 | 87.0 |
MS.gene038655.t1 | MTR_3g107060 | 27.937 | 315 | 140 | 12 | 6 | 303 | 66 | 310 | 2.19e-20 | 90.5 |
MS.gene038655.t1 | MTR_1g089005 | 39.231 | 130 | 70 | 3 | 13 | 135 | 4 | 131 | 4.36e-17 | 77.8 |
MS.gene038655.t1 | MTR_6g048160 | 54.795 | 73 | 28 | 2 | 62 | 134 | 22 | 89 | 4.36e-16 | 72.8 |
MS.gene038655.t1 | MTR_4g114220 | 48.148 | 81 | 31 | 2 | 51 | 131 | 31 | 100 | 9.03e-14 | 68.2 |
MS.gene038655.t1 | MTR_4g031040 | 32.593 | 135 | 63 | 3 | 134 | 263 | 25 | 136 | 9.13e-14 | 67.8 |
MS.gene038655.t1 | MTR_1g098320 | 43.590 | 78 | 44 | 0 | 247 | 324 | 47 | 124 | 6.29e-13 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038655.t1 | AT5G40150 | 60.000 | 305 | 117 | 2 | 20 | 324 | 29 | 328 | 4.32e-136 | 389 |
MS.gene038655.t1 | AT5G47000 | 57.143 | 322 | 130 | 2 | 10 | 327 | 16 | 333 | 6.26e-136 | 389 |
MS.gene038655.t1 | AT3G28200 | 57.705 | 305 | 123 | 1 | 20 | 324 | 18 | 316 | 4.52e-132 | 379 |
MS.gene038655.t1 | AT4G17690 | 55.873 | 315 | 134 | 1 | 14 | 328 | 17 | 326 | 9.15e-132 | 379 |
MS.gene038655.t1 | AT1G24110 | 54.517 | 321 | 141 | 3 | 6 | 325 | 7 | 323 | 1.62e-124 | 360 |
MS.gene038655.t1 | AT5G14130 | 46.057 | 317 | 161 | 4 | 13 | 324 | 19 | 330 | 3.24e-93 | 280 |
MS.gene038655.t1 | AT5G14130 | 45.110 | 317 | 167 | 3 | 10 | 324 | 60 | 371 | 1.83e-92 | 280 |
MS.gene038655.t1 | AT4G37520 | 44.118 | 306 | 168 | 2 | 21 | 324 | 25 | 329 | 2.70e-92 | 278 |
MS.gene038655.t1 | AT4G37530 | 43.590 | 312 | 171 | 3 | 16 | 324 | 20 | 329 | 1.21e-91 | 276 |
MS.gene038655.t1 | AT4G37520 | 43.791 | 306 | 166 | 3 | 21 | 324 | 25 | 326 | 6.96e-90 | 272 |
MS.gene038655.t1 | AT5G67400 | 43.506 | 308 | 171 | 2 | 19 | 324 | 23 | 329 | 6.26e-86 | 262 |
MS.gene038655.t1 | AT2G18980 | 41.875 | 320 | 179 | 3 | 7 | 324 | 9 | 323 | 2.97e-84 | 257 |
MS.gene038655.t1 | AT3G49960 | 42.857 | 308 | 173 | 2 | 19 | 324 | 23 | 329 | 1.67e-83 | 256 |
MS.gene038655.t1 | AT4G30170 | 41.830 | 306 | 171 | 3 | 21 | 324 | 25 | 325 | 1.92e-81 | 250 |
MS.gene038655.t1 | AT4G37530 | 44.151 | 265 | 143 | 3 | 16 | 277 | 20 | 282 | 1.75e-77 | 239 |
MS.gene038655.t1 | AT5G51890 | 40.190 | 316 | 182 | 4 | 4 | 317 | 5 | 315 | 1.41e-75 | 235 |
MS.gene038655.t1 | AT2G34060 | 39.414 | 307 | 183 | 2 | 20 | 323 | 39 | 345 | 2.00e-75 | 236 |
MS.gene038655.t1 | AT3G50990 | 40.432 | 324 | 185 | 6 | 7 | 325 | 22 | 342 | 2.75e-75 | 235 |
MS.gene038655.t1 | AT4G33420 | 41.250 | 320 | 175 | 5 | 5 | 324 | 19 | 325 | 2.35e-74 | 232 |
MS.gene038655.t1 | AT5G66390 | 40.789 | 304 | 177 | 3 | 23 | 325 | 33 | 334 | 3.76e-74 | 232 |
MS.gene038655.t1 | AT2G18150 | 39.414 | 307 | 183 | 3 | 20 | 325 | 33 | 337 | 5.75e-74 | 231 |
MS.gene038655.t1 | AT4G36430 | 39.252 | 321 | 190 | 5 | 6 | 325 | 15 | 331 | 7.85e-74 | 231 |
MS.gene038655.t1 | AT4G33420 | 41.250 | 320 | 175 | 5 | 5 | 324 | 66 | 372 | 9.80e-74 | 232 |
MS.gene038655.t1 | AT2G18140 | 38.585 | 311 | 188 | 3 | 16 | 325 | 28 | 336 | 3.17e-72 | 227 |
MS.gene038655.t1 | AT5G17820 | 37.742 | 310 | 181 | 4 | 15 | 324 | 16 | 313 | 9.96e-71 | 223 |
MS.gene038655.t1 | AT4G31760 | 40.063 | 317 | 182 | 4 | 10 | 324 | 16 | 326 | 1.13e-70 | 223 |
MS.gene038655.t1 | AT3G21770 | 39.032 | 310 | 183 | 5 | 13 | 320 | 19 | 324 | 2.71e-70 | 222 |
MS.gene038655.t1 | AT5G42180 | 38.019 | 313 | 185 | 5 | 10 | 320 | 8 | 313 | 3.13e-70 | 221 |
MS.gene038655.t1 | AT5G17820 | 37.460 | 315 | 185 | 4 | 10 | 324 | 64 | 366 | 8.36e-70 | 222 |
MS.gene038655.t1 | AT2G24800 | 40.777 | 309 | 160 | 6 | 26 | 324 | 34 | 329 | 1.01e-69 | 220 |
MS.gene038655.t1 | AT1G05260 | 37.072 | 321 | 188 | 6 | 10 | 324 | 13 | 325 | 1.11e-69 | 220 |
MS.gene038655.t1 | AT4G08770 | 38.658 | 313 | 186 | 4 | 17 | 325 | 18 | 328 | 3.52e-69 | 219 |
MS.gene038655.t1 | AT2G38380 | 38.941 | 321 | 186 | 6 | 10 | 324 | 17 | 333 | 4.96e-69 | 219 |
MS.gene038655.t1 | AT1G71695 | 39.000 | 300 | 175 | 3 | 26 | 324 | 47 | 339 | 2.31e-68 | 218 |
MS.gene038655.t1 | AT4G08780 | 38.019 | 313 | 188 | 4 | 17 | 325 | 18 | 328 | 7.66e-68 | 216 |
MS.gene038655.t1 | AT5G06730 | 36.741 | 313 | 194 | 3 | 14 | 324 | 24 | 334 | 8.30e-68 | 216 |
MS.gene038655.t1 | AT4G33870 | 36.499 | 337 | 178 | 2 | 18 | 320 | 63 | 397 | 1.12e-67 | 218 |
MS.gene038655.t1 | AT5G06720 | 36.422 | 313 | 195 | 3 | 14 | 324 | 23 | 333 | 3.49e-67 | 214 |
MS.gene038655.t1 | AT3G01190 | 38.170 | 317 | 187 | 6 | 10 | 324 | 12 | 321 | 7.31e-67 | 213 |
MS.gene038655.t1 | AT2G41480 | 40.187 | 321 | 179 | 6 | 10 | 324 | 15 | 328 | 1.84e-66 | 212 |
MS.gene038655.t1 | AT4G16270 | 40.604 | 298 | 172 | 4 | 28 | 324 | 55 | 348 | 2.71e-66 | 212 |
MS.gene038655.t1 | AT1G14550 | 39.032 | 310 | 179 | 5 | 17 | 324 | 20 | 321 | 3.49e-66 | 211 |
MS.gene038655.t1 | AT4G11290 | 35.331 | 317 | 201 | 3 | 10 | 324 | 12 | 326 | 3.99e-66 | 211 |
MS.gene038655.t1 | AT5G15180 | 37.458 | 299 | 181 | 4 | 27 | 324 | 36 | 329 | 6.07e-66 | 211 |
MS.gene038655.t1 | AT1G05240 | 39.933 | 298 | 171 | 4 | 26 | 320 | 29 | 321 | 1.10e-65 | 210 |
MS.gene038655.t1 | AT1G05250 | 39.933 | 298 | 171 | 4 | 26 | 320 | 29 | 321 | 1.10e-65 | 210 |
MS.gene038655.t1 | AT2G35380 | 38.720 | 328 | 186 | 7 | 10 | 324 | 10 | 335 | 1.23e-65 | 210 |
MS.gene038655.t1 | AT2G38390 | 37.304 | 319 | 190 | 6 | 12 | 324 | 19 | 333 | 1.47e-65 | 210 |
MS.gene038655.t1 | AT3G32980 | 36.923 | 325 | 198 | 5 | 5 | 324 | 12 | 334 | 2.17e-65 | 210 |
MS.gene038655.t1 | AT5G05340 | 37.540 | 309 | 182 | 5 | 18 | 324 | 25 | 324 | 2.43e-65 | 209 |
MS.gene038655.t1 | AT3G03670 | 35.962 | 317 | 196 | 3 | 10 | 324 | 10 | 321 | 4.78e-65 | 208 |
MS.gene038655.t1 | AT3G49120 | 36.196 | 326 | 201 | 5 | 5 | 325 | 13 | 336 | 5.09e-65 | 209 |
MS.gene038655.t1 | AT5G19890 | 37.778 | 315 | 184 | 6 | 15 | 325 | 22 | 328 | 5.30e-64 | 206 |
MS.gene038655.t1 | AT1G68850 | 37.621 | 311 | 180 | 8 | 23 | 324 | 30 | 335 | 6.30e-64 | 206 |
MS.gene038655.t1 | AT3G49110 | 36.991 | 319 | 194 | 5 | 12 | 325 | 21 | 337 | 8.64e-64 | 206 |
MS.gene038655.t1 | AT1G44970 | 37.582 | 306 | 187 | 3 | 21 | 324 | 43 | 346 | 1.12e-63 | 205 |
MS.gene038655.t1 | AT2G37130 | 39.172 | 314 | 181 | 4 | 14 | 324 | 21 | 327 | 1.29e-63 | 204 |
MS.gene038655.t1 | AT4G21960 | 35.802 | 324 | 192 | 4 | 10 | 324 | 11 | 327 | 1.70e-63 | 204 |
MS.gene038655.t1 | AT2G22420 | 36.808 | 307 | 189 | 4 | 18 | 324 | 18 | 319 | 2.16e-63 | 204 |
MS.gene038655.t1 | AT5G64120 | 37.793 | 299 | 176 | 6 | 27 | 324 | 39 | 328 | 7.31e-63 | 202 |
MS.gene038655.t1 | AT1G30870 | 38.284 | 303 | 174 | 6 | 26 | 325 | 54 | 346 | 8.00e-63 | 203 |
MS.gene038655.t1 | AT2G37130 | 39.735 | 302 | 172 | 4 | 26 | 324 | 2 | 296 | 1.58e-62 | 201 |
MS.gene038655.t1 | AT1G49570 | 37.417 | 302 | 186 | 2 | 21 | 320 | 46 | 346 | 3.08e-62 | 202 |
MS.gene038655.t1 | AT1G14540 | 34.810 | 316 | 197 | 4 | 10 | 324 | 8 | 315 | 8.47e-62 | 199 |
MS.gene038655.t1 | AT4G26010 | 34.472 | 322 | 194 | 7 | 5 | 325 | 5 | 310 | 1.23e-60 | 196 |
MS.gene038655.t1 | AT4G26010 | 34.472 | 322 | 194 | 7 | 5 | 325 | 33 | 338 | 1.94e-60 | 197 |
MS.gene038655.t1 | AT3G17070 | 36.304 | 303 | 179 | 6 | 26 | 321 | 41 | 336 | 3.76e-60 | 196 |
MS.gene038655.t1 | AT1G34510 | 36.050 | 319 | 187 | 7 | 8 | 325 | 8 | 310 | 6.10e-60 | 194 |
MS.gene038655.t1 | AT5G64110 | 37.829 | 304 | 172 | 6 | 27 | 324 | 38 | 330 | 6.23e-60 | 195 |
MS.gene038655.t1 | AT5G19880 | 34.985 | 323 | 201 | 6 | 7 | 324 | 11 | 329 | 4.23e-59 | 193 |
MS.gene038655.t1 | AT5G58400 | 36.624 | 314 | 187 | 6 | 10 | 320 | 17 | 321 | 2.20e-58 | 191 |
MS.gene038655.t1 | AT2G39040 | 36.977 | 311 | 187 | 6 | 20 | 324 | 43 | 350 | 2.31e-57 | 189 |
MS.gene038655.t1 | AT5G58390 | 34.069 | 317 | 197 | 5 | 7 | 320 | 5 | 312 | 1.88e-56 | 186 |
MS.gene038655.t1 | AT5G39580 | 35.276 | 326 | 192 | 9 | 1 | 324 | 11 | 319 | 1.34e-54 | 181 |
MS.gene038655.t1 | AT4G25980 | 34.603 | 315 | 195 | 5 | 15 | 324 | 18 | 326 | 2.03e-54 | 181 |
MS.gene038655.t1 | AT1G77100 | 36.334 | 311 | 182 | 8 | 19 | 324 | 20 | 319 | 8.91e-54 | 179 |
MS.gene038655.t1 | AT5G64100 | 33.993 | 303 | 185 | 6 | 26 | 324 | 40 | 331 | 1.96e-52 | 176 |
MS.gene038655.t1 | AT5G24070 | 32.840 | 338 | 197 | 7 | 8 | 324 | 7 | 335 | 4.35e-52 | 175 |
MS.gene038655.t1 | AT5G22410 | 34.877 | 324 | 195 | 9 | 10 | 325 | 12 | 327 | 3.54e-49 | 167 |
MS.gene038655.t1 | AT2G35380 | 39.676 | 247 | 141 | 6 | 84 | 324 | 3 | 247 | 3.47e-48 | 162 |
MS.gene038655.t1 | AT2G43480 | 32.166 | 314 | 196 | 6 | 19 | 324 | 31 | 335 | 1.30e-47 | 163 |
MS.gene038655.t1 | AT3G17070 | 35.125 | 279 | 166 | 7 | 50 | 321 | 3 | 273 | 3.02e-46 | 158 |
MS.gene038655.t1 | AT2G24800 | 43.902 | 164 | 87 | 2 | 26 | 189 | 34 | 192 | 6.29e-37 | 133 |
MS.gene038655.t1 | AT5G39580 | 35.859 | 198 | 113 | 5 | 1 | 198 | 11 | 194 | 7.55e-30 | 114 |
MS.gene038655.t1 | AT4G25980 | 35.556 | 180 | 111 | 3 | 16 | 195 | 64 | 238 | 4.08e-29 | 113 |
MS.gene038655.t1 | AT4G32320 | 29.861 | 288 | 118 | 9 | 33 | 303 | 99 | 319 | 4.52e-21 | 92.4 |
MS.gene038655.t1 | AT3G42570 | 36.559 | 93 | 58 | 1 | 100 | 191 | 57 | 149 | 7.31e-14 | 68.6 |
MS.gene038655.t1 | AT4G08390 | 27.778 | 198 | 112 | 4 | 117 | 306 | 185 | 359 | 9.62e-14 | 71.6 |
MS.gene038655.t1 | AT4G08390 | 27.778 | 198 | 112 | 4 | 117 | 306 | 186 | 360 | 9.94e-14 | 71.6 |
MS.gene038655.t1 | AT4G08390 | 27.778 | 198 | 112 | 4 | 117 | 306 | 186 | 360 | 9.94e-14 | 71.6 |
MS.gene038655.t1 | AT4G08390 | 27.778 | 198 | 112 | 4 | 117 | 306 | 186 | 360 | 9.94e-14 | 71.6 |
MS.gene038655.t1 | AT1G77490 | 28.643 | 199 | 115 | 5 | 117 | 309 | 165 | 342 | 1.21e-13 | 71.6 |
MS.gene038655.t1 | AT1G77490 | 28.643 | 199 | 115 | 5 | 117 | 309 | 165 | 342 | 1.23e-13 | 71.6 |
Find 73 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCAAGTTCTTTGAGGATTT+TGG | 0.130855 | 8.3:-39213983 | MS.gene038655:CDS |
TTGATGATGTCTTCAAATTT+AGG | 0.179444 | 8.3:+39215040 | None:intergenic |
GCATACTCTGGATTATATTT+AGG | 0.231124 | 8.3:+39214205 | None:intergenic |
CGATTGTGTAATTGAAAATA+AGG | 0.232398 | 8.3:+39215096 | None:intergenic |
CTCTGCCTTGTTGAAGGAAT+TGG | 0.278354 | 8.3:+39214904 | None:intergenic |
AAATAAGGCTAGGCAGAATA+AGG | 0.278845 | 8.3:+39215111 | None:intergenic |
GAAGAGAGGAATGGGACTTT+TGG | 0.327984 | 8.3:-39214074 | MS.gene038655:CDS |
CGTGACCTTGTTGTCATTGT+TGG | 0.345880 | 8.3:-39214755 | MS.gene038655:CDS |
CAAGAGATGGTGGCTCTAAC+AGG | 0.366286 | 8.3:-39214307 | MS.gene038655:CDS |
ACCAAAATCCTCAAAGAACT+TGG | 0.389178 | 8.3:+39213982 | None:intergenic |
TTCTTCAGCGATTGCATGGT+TGG | 0.397734 | 8.3:-39214956 | MS.gene038655:CDS |
AAGAATTTGAAGAGAGGAAT+GGG | 0.407936 | 8.3:-39214082 | MS.gene038655:CDS |
TTTGGCTACGGATAGTTTGA+TGG | 0.413246 | 8.3:-39214056 | MS.gene038655:CDS |
AAATCAAACCAAGTTCTTTG+AGG | 0.414406 | 8.3:-39213990 | MS.gene038655:CDS |
AGTGCAGCGCCAGCGGTTGA+AGG | 0.414653 | 8.3:+39214986 | None:intergenic |
CTAACAGGTGCACACACAAT+AGG | 0.419024 | 8.3:-39214292 | MS.gene038655:CDS |
AATAAGGCTAGGCAGAATAA+GGG | 0.427388 | 8.3:+39215112 | None:intergenic |
CAAGAATTTGAAGAGAGGAA+TGG | 0.430899 | 8.3:-39214083 | MS.gene038655:CDS |
TGAAGGAATTGGAGGATACT+AGG | 0.436422 | 8.3:+39214915 | None:intergenic |
ACTGCAAACAGTTTAGTAAC+AGG | 0.436437 | 8.3:-39214261 | MS.gene038655:CDS |
TTAAGCCCTGCAGCATACTC+TGG | 0.440829 | 8.3:+39214193 | None:intergenic |
CATATTAAGGAGGGGAAGGA+TGG | 0.448934 | 8.3:-39213932 | MS.gene038655:CDS |
CCTCTTCTTCAGCGATTGCA+TGG | 0.449760 | 8.3:-39214960 | MS.gene038655:CDS |
GACATCAACCTCTCCCTCTC+AGG | 0.462357 | 8.3:-39214872 | MS.gene038655:CDS |
ATCACGCTCTGCCTTGTTGA+AGG | 0.475369 | 8.3:+39214898 | None:intergenic |
CAAGAGGACAAAACCATTTG+TGG | 0.479493 | 8.3:-39214026 | MS.gene038655:CDS |
GCCAACCATGACCATGTCTC+AGG | 0.480069 | 8.3:-39214651 | MS.gene038655:intron |
GAGGCGGAGTGCAGCGCCAG+CGG | 0.480867 | 8.3:+39214979 | None:intergenic |
TGCCTTGTTGAAGGAATTGG+AGG | 0.483730 | 8.3:+39214907 | None:intergenic |
TCAGCATACATATCCACAAA+TGG | 0.490986 | 8.3:+39214013 | None:intergenic |
TATAATCCAGAGTATGCTGC+AGG | 0.492335 | 8.3:-39214199 | MS.gene038655:CDS |
TTCAGCGATTGCATGGTTGG+AGG | 0.503281 | 8.3:-39214953 | MS.gene038655:CDS |
AACCATCTCCTGAGAGGGAG+AGG | 0.503505 | 8.3:+39214864 | None:intergenic |
TTTGCATATTAAGGAGGGGA+AGG | 0.504509 | 8.3:-39213936 | MS.gene038655:CDS |
CACGTCGTTGAACGCTGACA+TGG | 0.507162 | 8.3:+39214138 | None:intergenic |
AGCAAAGAACATGTTGGAGC+TGG | 0.508896 | 8.3:-39214825 | MS.gene038655:CDS |
CCAAGGTCTAACTCGTAAGA+TGG | 0.511014 | 8.3:+39214728 | None:intergenic |
GACCTTGTTGTCATTGTTGG+TGG | 0.518560 | 8.3:-39214752 | MS.gene038655:CDS |
AACCTCTCCCTCTCAGGAGA+TGG | 0.518611 | 8.3:-39214866 | MS.gene038655:CDS |
ACCTGAGACATGGTCATGGT+TGG | 0.519828 | 8.3:+39214650 | None:intergenic |
TGTTTGCTGCTTGTCTGTGA+CGG | 0.530055 | 8.3:+39215012 | None:intergenic |
TCAGCACAAGAGACCACACC+GGG | 0.536779 | 8.3:+39214797 | None:intergenic |
TTGGCTACGGATAGTTTGAT+GGG | 0.544626 | 8.3:-39214055 | MS.gene038655:CDS |
CCATCTTACGAGTTAGACCT+TGG | 0.545376 | 8.3:-39214728 | MS.gene038655:CDS |
CCATGCAATCGCTGAAGAAG+AGG | 0.548520 | 8.3:+39214960 | None:intergenic |
CAAACAACACCTTCAACCGC+TGG | 0.551449 | 8.3:-39214995 | MS.gene038655:CDS |
TACGGATAGTTTGATGGGTG+AGG | 0.562512 | 8.3:-39214050 | MS.gene038655:CDS |
GTTTGATGGGTGAGGACAAG+AGG | 0.573583 | 8.3:-39214042 | MS.gene038655:CDS |
AGGGTTTACAGTTCAAGAGA+TGG | 0.577701 | 8.3:-39214320 | MS.gene038655:CDS |
CTCAAAACCATCTCCTGAGA+GGG | 0.577826 | 8.3:+39214859 | None:intergenic |
CTAAACTGTCTCTTCGACCA+AGG | 0.580683 | 8.3:+39214711 | None:intergenic |
GACATGGTCATGGTTGGCAA+CGG | 0.587229 | 8.3:+39214656 | None:intergenic |
TATTTCAAGAATTTGAAGAG+AGG | 0.595485 | 8.3:-39214088 | MS.gene038655:CDS |
GTGTAATTGAAAATAAGGCT+AGG | 0.597591 | 8.3:+39215101 | None:intergenic |
AACAAGGTCACGTGCCGCTG+CGG | 0.605981 | 8.3:+39214766 | None:intergenic |
TACATATTATCAAACTTGCT+AGG | 0.606302 | 8.3:+39214109 | None:intergenic |
TCGTTGAACGCTGACATGGA+AGG | 0.606868 | 8.3:+39214142 | None:intergenic |
TGCAATCGCTGAAGAAGAGG+CGG | 0.617338 | 8.3:+39214963 | None:intergenic |
TGCTGACATACTTGCCGCAG+CGG | 0.617746 | 8.3:-39214780 | MS.gene038655:CDS |
TACACGAGCAAAGAACATGT+TGG | 0.623930 | 8.3:-39214831 | MS.gene038655:CDS |
ATATTTAGGATCAGTTTCAG+TGG | 0.624806 | 8.3:+39214219 | None:intergenic |
GTTTACAGTTCAAGAGATGG+TGG | 0.625008 | 8.3:-39214317 | MS.gene038655:CDS |
TGAGAGGGAGAGGTTGATGT+CGG | 0.634718 | 8.3:+39214874 | None:intergenic |
ATAAGGCTAGGCAGAATAAG+GGG | 0.641175 | 8.3:+39215113 | None:intergenic |
CCTCAAAACCATCTCCTGAG+AGG | 0.641572 | 8.3:+39214858 | None:intergenic |
AGGATGGAGAGATACGACAT+AGG | 0.662838 | 8.3:-39213916 | MS.gene038655:CDS |
ATCCTCCAATTCCTTCAACA+AGG | 0.665150 | 8.3:-39214909 | MS.gene038655:CDS |
ATAATCCAGAGTATGCTGCA+GGG | 0.674221 | 8.3:-39214198 | MS.gene038655:CDS |
GGAGCTGGAATGCCCCGGTG+TGG | 0.680967 | 8.3:-39214810 | MS.gene038655:CDS |
GACCACCAACAATGACAACA+AGG | 0.684955 | 8.3:+39214750 | None:intergenic |
ATGTTGGAGCTGGAATGCCC+CGG | 0.689095 | 8.3:-39214815 | MS.gene038655:CDS |
GTCAGCACAAGAGACCACAC+CGG | 0.698599 | 8.3:+39214796 | None:intergenic |
CAGCACAAGAGACCACACCG+GGG | 0.844878 | 8.3:+39214798 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTGTGAATTTTGTAATA+CGG | - | chr8.3:39214558-39214577 | MS.gene038655:intron | 15.0% |
! | CGATTGTGTAATTGAAAATA+AGG | + | chr8.3:39213926-39213945 | None:intergenic | 25.0% |
! | TATTTCAAGAATTTGAAGAG+AGG | - | chr8.3:39214931-39214950 | MS.gene038655:CDS | 25.0% |
!! | ATAGACATTTTCACTTCAAA+AGG | - | chr8.3:39214679-39214698 | MS.gene038655:CDS | 25.0% |
!! | TACATATTATCAAACTTGCT+AGG | + | chr8.3:39214913-39214932 | None:intergenic | 25.0% |
!! | TAGACATTTTCACTTCAAAA+GGG | - | chr8.3:39214680-39214699 | MS.gene038655:CDS | 25.0% |
!!! | AAGGATCTTTTTGGTAATTT+TGG | + | chr8.3:39214861-39214880 | None:intergenic | 25.0% |
!!! | CAAATTTAGGACATGATTTT+TGG | + | chr8.3:39213969-39213988 | None:intergenic | 25.0% |
!!! | TTGATGATGTCTTCAAATTT+AGG | + | chr8.3:39213982-39214001 | None:intergenic | 25.0% |
AAATCAAACCAAGTTCTTTG+AGG | - | chr8.3:39215029-39215048 | MS.gene038655:CDS | 30.0% | |
AAGAATTTGAAGAGAGGAAT+GGG | - | chr8.3:39214937-39214956 | MS.gene038655:CDS | 30.0% | |
GCATACTCTGGATTATATTT+AGG | + | chr8.3:39214817-39214836 | None:intergenic | 30.0% | |
GTGTAATTGAAAATAAGGCT+AGG | + | chr8.3:39213921-39213940 | None:intergenic | 30.0% | |
TGTCAACAATTCAATGTAGA+AGG | + | chr8.3:39214627-39214646 | None:intergenic | 30.0% | |
! | AGTGTTTTGCATATTAAGGA+GGG | - | chr8.3:39215078-39215097 | MS.gene038655:CDS | 30.0% |
! | ATATTTAGGATCAGTTTCAG+TGG | + | chr8.3:39214803-39214822 | None:intergenic | 30.0% |
! | ATGTAGAAGGATGAAGTATT+TGG | + | chr8.3:39214614-39214633 | None:intergenic | 30.0% |
! | GCTTAGTGTTTTGCATATTA+AGG | - | chr8.3:39215074-39215093 | MS.gene038655:CDS | 30.0% |
! | TAGTGTTTTGCATATTAAGG+AGG | - | chr8.3:39215077-39215096 | MS.gene038655:CDS | 30.0% |
!!! | CATGATTTTTGGTAGTAGTT+TGG | + | chr8.3:39213958-39213977 | None:intergenic | 30.0% |
!!! | TTGTTTTTTTACCTGAGACA+TGG | + | chr8.3:39214382-39214401 | None:intergenic | 30.0% |
AAATAAGGCTAGGCAGAATA+AGG | + | chr8.3:39213911-39213930 | None:intergenic | 35.0% | |
AATAAGGCTAGGCAGAATAA+GGG | + | chr8.3:39213910-39213929 | None:intergenic | 35.0% | |
ACCAAAATCCTCAAAGAACT+TGG | + | chr8.3:39215040-39215059 | None:intergenic | 35.0% | |
ACTGCAAACAGTTTAGTAAC+AGG | - | chr8.3:39214758-39214777 | MS.gene038655:CDS | 35.0% | |
CAAGAATTTGAAGAGAGGAA+TGG | - | chr8.3:39214936-39214955 | MS.gene038655:CDS | 35.0% | |
TCAGCATACATATCCACAAA+TGG | + | chr8.3:39215009-39215028 | None:intergenic | 35.0% | |
! | GTGTTTTGCATATTAAGGAG+GGG | - | chr8.3:39215079-39215098 | MS.gene038655:CDS | 35.0% |
!! | ACCAAGTTCTTTGAGGATTT+TGG | - | chr8.3:39215036-39215055 | MS.gene038655:CDS | 35.0% |
!!! | GTTTTCTGTGTCGATTGATT+TGG | + | chr8.3:39214337-39214356 | None:intergenic | 35.0% |
AGGGTTTACAGTTCAAGAGA+TGG | - | chr8.3:39214699-39214718 | MS.gene038655:CDS | 40.0% | |
ATAAGGCTAGGCAGAATAAG+GGG | + | chr8.3:39213909-39213928 | None:intergenic | 40.0% | |
ATAATCCAGAGTATGCTGCA+GGG | - | chr8.3:39214821-39214840 | MS.gene038655:CDS | 40.0% | |
ATCCTCCAATTCCTTCAACA+AGG | - | chr8.3:39214110-39214129 | MS.gene038655:CDS | 40.0% | |
CAAGAGGACAAAACCATTTG+TGG | - | chr8.3:39214993-39215012 | MS.gene038655:CDS | 40.0% | |
GTTTACAGTTCAAGAGATGG+TGG | - | chr8.3:39214702-39214721 | MS.gene038655:CDS | 40.0% | |
TACACGAGCAAAGAACATGT+TGG | - | chr8.3:39214188-39214207 | MS.gene038655:CDS | 40.0% | |
TATAATCCAGAGTATGCTGC+AGG | - | chr8.3:39214820-39214839 | MS.gene038655:CDS | 40.0% | |
TGAAGGAATTGGAGGATACT+AGG | + | chr8.3:39214107-39214126 | None:intergenic | 40.0% | |
TTGGCTACGGATAGTTTGAT+GGG | - | chr8.3:39214964-39214983 | MS.gene038655:CDS | 40.0% | |
TTTATGTGACCATGCATGCT+AGG | - | chr8.3:39214654-39214673 | MS.gene038655:CDS | 40.0% | |
TTTGCATATTAAGGAGGGGA+AGG | - | chr8.3:39215083-39215102 | MS.gene038655:CDS | 40.0% | |
TTTGGCTACGGATAGTTTGA+TGG | - | chr8.3:39214963-39214982 | MS.gene038655:CDS | 40.0% | |
! | CTGACATGGAAGGATCTTTT+TGG | + | chr8.3:39214870-39214889 | None:intergenic | 40.0% |
! | TTTTACCTGAGACATGGTCA+TGG | + | chr8.3:39214376-39214395 | None:intergenic | 40.0% |
AGCAAAGAACATGTTGGAGC+TGG | - | chr8.3:39214194-39214213 | MS.gene038655:CDS | 45.0% | |
AGGATGGAGAGATACGACAT+AGG | - | chr8.3:39215103-39215122 | MS.gene038655:CDS | 45.0% | |
CATATTAAGGAGGGGAAGGA+TGG | - | chr8.3:39215087-39215106 | MS.gene038655:CDS | 45.0% | |
CCAAGGTCTAACTCGTAAGA+TGG | + | chr8.3:39214294-39214313 | None:intergenic | 45.0% | |
CCATCTTACGAGTTAGACCT+TGG | - | chr8.3:39214291-39214310 | MS.gene038655:CDS | 45.0% | |
CTAAACTGTCTCTTCGACCA+AGG | + | chr8.3:39214311-39214330 | None:intergenic | 45.0% | |
CTAACAGGTGCACACACAAT+AGG | - | chr8.3:39214727-39214746 | MS.gene038655:CDS | 45.0% | |
CTCAAAACCATCTCCTGAGA+GGG | + | chr8.3:39214163-39214182 | None:intergenic | 45.0% | |
GACCACCAACAATGACAACA+AGG | + | chr8.3:39214272-39214291 | None:intergenic | 45.0% | |
TGTCTATCACCTAGCATGCA+TGG | + | chr8.3:39214666-39214685 | None:intergenic | 45.0% | |
TTCTTCAGCGATTGCATGGT+TGG | - | chr8.3:39214063-39214082 | MS.gene038655:CDS | 45.0% | |
! | CGTGACCTTGTTGTCATTGT+TGG | - | chr8.3:39214264-39214283 | MS.gene038655:CDS | 45.0% |
! | CTCTGCCTTGTTGAAGGAAT+TGG | + | chr8.3:39214118-39214137 | None:intergenic | 45.0% |
! | GAAGAGAGGAATGGGACTTT+TGG | - | chr8.3:39214945-39214964 | MS.gene038655:CDS | 45.0% |
! | GACCTTGTTGTCATTGTTGG+TGG | - | chr8.3:39214267-39214286 | MS.gene038655:CDS | 45.0% |
! | TACGGATAGTTTGATGGGTG+AGG | - | chr8.3:39214969-39214988 | MS.gene038655:CDS | 45.0% |
! | TGCCTTGTTGAAGGAATTGG+AGG | + | chr8.3:39214115-39214134 | None:intergenic | 45.0% |
! | TGTTTGCTGCTTGTCTGTGA+CGG | + | chr8.3:39214010-39214029 | None:intergenic | 45.0% |
!! | AGGAATGGGACTTTTGGCTA+CGG | - | chr8.3:39214951-39214970 | MS.gene038655:CDS | 45.0% |
ACCTGAGACATGGTCATGGT+TGG | + | chr8.3:39214372-39214391 | None:intergenic | 50.0% | |
CAAACAACACCTTCAACCGC+TGG | - | chr8.3:39214024-39214043 | MS.gene038655:CDS | 50.0% | |
CCATGCAATCGCTGAAGAAG+AGG | + | chr8.3:39214062-39214081 | None:intergenic | 50.0% | |
CCTCAAAACCATCTCCTGAG+AGG | + | chr8.3:39214164-39214183 | None:intergenic | 50.0% | |
CCTCTTCTTCAGCGATTGCA+TGG | - | chr8.3:39214059-39214078 | MS.gene038655:CDS | 50.0% | |
GACATGGTCATGGTTGGCAA+CGG | + | chr8.3:39214366-39214385 | None:intergenic | 50.0% | |
TCGTTGAACGCTGACATGGA+AGG | + | chr8.3:39214880-39214899 | None:intergenic | 50.0% | |
TGCAATCGCTGAAGAAGAGG+CGG | + | chr8.3:39214059-39214078 | None:intergenic | 50.0% | |
TTAAGCCCTGCAGCATACTC+TGG | + | chr8.3:39214829-39214848 | None:intergenic | 50.0% | |
TTCAGCGATTGCATGGTTGG+AGG | - | chr8.3:39214066-39214085 | MS.gene038655:CDS | 50.0% | |
! | ATCACGCTCTGCCTTGTTGA+AGG | + | chr8.3:39214124-39214143 | None:intergenic | 50.0% |
! | GTTTGATGGGTGAGGACAAG+AGG | - | chr8.3:39214977-39214996 | MS.gene038655:CDS | 50.0% |
!! | CAAGAGATGGTGGCTCTAAC+AGG | - | chr8.3:39214712-39214731 | MS.gene038655:CDS | 50.0% |
!! | CCTCTCAGGAGATGGTTTTG+AGG | - | chr8.3:39214161-39214180 | MS.gene038655:CDS | 50.0% |
!! | TGAGAGGGAGAGGTTGATGT+CGG | + | chr8.3:39214148-39214167 | None:intergenic | 50.0% |
AACCATCTCCTGAGAGGGAG+AGG | + | chr8.3:39214158-39214177 | None:intergenic | 55.0% | |
AACCTCTCCCTCTCAGGAGA+TGG | - | chr8.3:39214153-39214172 | MS.gene038655:CDS | 55.0% | |
ATGTTGGAGCTGGAATGCCC+CGG | - | chr8.3:39214204-39214223 | MS.gene038655:CDS | 55.0% | |
CACGTCGTTGAACGCTGACA+TGG | + | chr8.3:39214884-39214903 | None:intergenic | 55.0% | |
GACATCAACCTCTCCCTCTC+AGG | - | chr8.3:39214147-39214166 | MS.gene038655:CDS | 55.0% | |
GCCAACCATGACCATGTCTC+AGG | - | chr8.3:39214368-39214387 | MS.gene038655:intron | 55.0% | |
GTCAGCACAAGAGACCACAC+CGG | + | chr8.3:39214226-39214245 | None:intergenic | 55.0% | |
TCAGCACAAGAGACCACACC+GGG | + | chr8.3:39214225-39214244 | None:intergenic | 55.0% | |
TGCTGACATACTTGCCGCAG+CGG | - | chr8.3:39214239-39214258 | MS.gene038655:CDS | 55.0% | |
CAGCACAAGAGACCACACCG+GGG | + | chr8.3:39214224-39214243 | None:intergenic | 60.0% | |
! | AACAAGGTCACGTGCCGCTG+CGG | + | chr8.3:39214256-39214275 | None:intergenic | 60.0% |
AGTGCAGCGCCAGCGGTTGA+AGG | + | chr8.3:39214036-39214055 | None:intergenic | 65.0% | |
GGAGCTGGAATGCCCCGGTG+TGG | - | chr8.3:39214209-39214228 | MS.gene038655:CDS | 70.0% | |
GAGGCGGAGTGCAGCGCCAG+CGG | + | chr8.3:39214043-39214062 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 39213883 | 39215158 | 39213883 | ID=MS.gene038655 |
chr8.3 | mRNA | 39213883 | 39215158 | 39213883 | ID=MS.gene038655.t1;Parent=MS.gene038655 |
chr8.3 | exon | 39214652 | 39215158 | 39214652 | ID=MS.gene038655.t1.exon1;Parent=MS.gene038655.t1 |
chr8.3 | CDS | 39214652 | 39215158 | 39214652 | ID=cds.MS.gene038655.t1;Parent=MS.gene038655.t1 |
chr8.3 | exon | 39213883 | 39214365 | 39213883 | ID=MS.gene038655.t1.exon2;Parent=MS.gene038655.t1 |
chr8.3 | CDS | 39213883 | 39214365 | 39213883 | ID=cds.MS.gene038655.t1;Parent=MS.gene038655.t1 |
Gene Sequence |
Protein sequence |