AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35795


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35795.t1 MTR_2g088770 97.348 264 7 0 1 264 63 326 0.0 540
MS.gene35795.t1 MTR_4g046713 70.833 264 75 2 1 263 64 326 4.36e-143 404
MS.gene35795.t1 MTR_7g107520 56.439 264 109 4 1 263 62 320 1.44e-101 299
MS.gene35795.t1 MTR_5g017860 48.679 265 132 4 1 263 64 326 1.67e-84 256
MS.gene35795.t1 MTR_5g017850 47.925 265 134 4 1 263 64 326 3.49e-84 255
MS.gene35795.t1 MTR_2g029850 49.064 267 130 5 1 263 66 330 6.19e-81 247
MS.gene35795.t1 MTR_2g029820 48.507 268 132 5 1 264 66 331 8.79e-81 247
MS.gene35795.t1 MTR_5g022870 49.813 267 120 8 1 263 60 316 2.61e-80 244
MS.gene35795.t1 MTR_3g092990 50.000 270 124 6 1 264 63 327 6.63e-80 244
MS.gene35795.t1 MTR_2g040000 48.519 270 130 5 1 264 66 332 9.39e-80 244
MS.gene35795.t1 MTR_5g021060 49.064 267 131 5 1 264 67 331 3.28e-79 242
MS.gene35795.t1 MTR_4g125940 47.015 268 134 5 1 263 10 274 5.98e-79 239
MS.gene35795.t1 MTR_8g075100 47.348 264 131 6 1 263 63 319 1.01e-78 241
MS.gene35795.t1 MTR_2g008710 47.744 266 132 4 1 263 64 325 1.89e-78 240
MS.gene35795.t1 MTR_2g029800 47.015 268 136 5 1 264 66 331 2.96e-78 241
MS.gene35795.t1 MTR_2g029815 47.191 267 135 5 1 263 66 330 3.85e-78 240
MS.gene35795.t1 MTR_8g076820 47.547 265 136 3 1 263 67 330 4.15e-78 239
MS.gene35795.t1 MTR_4g125940 47.015 268 134 5 1 263 65 329 6.43e-78 239
MS.gene35795.t1 MTR_1g025980 46.388 263 134 5 1 262 61 317 4.33e-77 236
MS.gene35795.t1 MTR_2g029830 45.896 268 139 5 1 264 65 330 4.71e-77 238
MS.gene35795.t1 MTR_1g101830 46.970 264 134 5 1 263 64 322 3.30e-76 234
MS.gene35795.t1 MTR_2g028980 45.693 267 139 5 1 263 66 330 1.07e-75 234
MS.gene35795.t1 MTR_2g029860 47.566 267 134 5 1 263 66 330 3.85e-75 233
MS.gene35795.t1 MTR_1g054205 43.657 268 144 5 1 263 61 326 2.60e-74 229
MS.gene35795.t1 MTR_3g466200 46.642 268 129 7 1 263 62 320 1.08e-73 228
MS.gene35795.t1 MTR_2g029560 44.569 267 142 5 1 263 61 325 7.11e-73 226
MS.gene35795.t1 MTR_2g029730 45.318 267 140 5 1 263 62 326 9.91e-73 226
MS.gene35795.t1 MTR_4g029180 45.318 267 133 7 1 263 64 321 1.00e-72 225
MS.gene35795.t1 MTR_1g038680 47.407 270 132 7 1 263 66 332 5.19e-72 224
MS.gene35795.t1 MTR_4g029170 45.318 267 133 7 1 263 64 321 6.05e-72 223
MS.gene35795.t1 MTR_3g092990 48.659 261 123 6 10 264 61 316 7.19e-71 220
MS.gene35795.t1 MTR_3g094650 47.126 261 129 6 1 259 65 318 1.32e-70 220
MS.gene35795.t1 MTR_2g029830 44.788 259 137 5 9 263 5 261 1.55e-70 219
MS.gene35795.t1 MTR_7g093370 44.030 268 143 5 1 263 106 371 1.60e-70 221
MS.gene35795.t1 MTR_4g114210 44.944 267 139 5 1 263 58 320 2.17e-70 219
MS.gene35795.t1 MTR_5g074970 46.468 269 129 7 1 263 67 326 2.53e-70 219
MS.gene35795.t1 MTR_7g029030 42.642 265 144 4 1 263 62 320 3.17e-70 219
MS.gene35795.t1 MTR_3g072190 44.151 265 137 5 1 263 63 318 3.29e-70 219
MS.gene35795.t1 MTR_2g029740 44.569 267 142 5 1 263 66 330 7.00e-70 219
MS.gene35795.t1 MTR_2g029750 44.776 268 140 6 1 263 66 330 2.57e-69 218
MS.gene35795.t1 MTR_6g027440 43.985 266 137 6 1 263 58 314 2.86e-69 216
MS.gene35795.t1 MTR_2g029910 44.776 268 141 6 1 263 67 332 4.11e-69 217
MS.gene35795.t1 MTR_2g084080 44.528 265 136 5 1 263 62 317 9.69e-69 215
MS.gene35795.t1 MTR_5g016010 43.446 267 144 5 1 262 64 328 1.28e-68 215
MS.gene35795.t1 MTR_2g084110 44.151 265 137 5 1 263 62 317 2.33e-68 214
MS.gene35795.t1 MTR_1g022970 45.693 267 139 5 1 263 83 347 2.73e-68 215
MS.gene35795.t1 MTR_4g083710 42.105 266 146 6 1 263 64 324 2.95e-68 214
MS.gene35795.t1 MTR_4g029200 43.396 265 139 5 1 263 83 338 3.19e-68 214
MS.gene35795.t1 MTR_2g437770 43.939 264 138 6 1 263 87 341 3.64e-68 214
MS.gene35795.t1 MTR_2g084020 44.737 266 135 6 1 263 62 318 4.79e-68 213
MS.gene35795.t1 MTR_1g086320 44.815 270 139 7 1 263 67 333 6.22e-68 213
MS.gene35795.t1 MTR_2g084010 44.528 265 137 4 1 263 62 318 2.21e-67 211
MS.gene35795.t1 MTR_1g086490 43.116 276 142 6 1 263 67 340 2.61e-67 212
MS.gene35795.t1 MTR_7g072510 42.264 265 142 5 1 263 57 312 2.86e-67 211
MS.gene35795.t1 MTR_7g086820 40.977 266 144 6 1 263 57 312 4.55e-67 211
MS.gene35795.t1 MTR_2g008160 44.815 270 135 6 1 263 61 323 7.05e-67 210
MS.gene35795.t1 MTR_4g133800 44.318 264 138 6 1 263 78 333 9.83e-67 210
MS.gene35795.t1 MTR_7g072480 42.642 265 141 5 1 263 61 316 3.36e-66 208
MS.gene35795.t1 MTR_1g077000 39.773 264 146 6 1 263 76 327 3.59e-66 209
MS.gene35795.t1 MTR_2g084090 43.985 266 137 6 1 263 62 318 2.26e-65 206
MS.gene35795.t1 MTR_0155s0040 42.642 265 137 9 1 263 64 315 3.45e-65 206
MS.gene35795.t1 MTR_2g008730 45.868 242 126 3 25 263 62 301 4.49e-65 205
MS.gene35795.t1 MTR_5g014100 41.971 274 143 6 1 263 63 331 1.63e-64 204
MS.gene35795.t1 MTR_3g072190 42.471 259 138 5 7 263 2 251 3.52e-64 201
MS.gene35795.t1 MTR_4g087965 42.105 266 145 6 3 261 81 344 4.55e-64 204
MS.gene35795.t1 MTR_1g009750 41.573 267 150 4 1 263 64 328 5.32e-64 203
MS.gene35795.t1 MTR_7g086870 40.755 265 145 6 1 264 59 312 5.43e-64 202
MS.gene35795.t1 MTR_4g074995 41.353 266 135 7 1 263 61 308 1.10e-63 202
MS.gene35795.t1 MTR_4g122640 43.071 267 143 7 1 263 75 336 1.21e-63 202
MS.gene35795.t1 MTR_4g029190 40.602 266 147 5 1 263 83 340 1.34e-63 202
MS.gene35795.t1 MTR_5g049280 39.852 271 152 9 1 263 70 337 1.82e-63 202
MS.gene35795.t1 MTR_4g127670 41.573 267 148 5 1 263 61 323 4.66e-63 201
MS.gene35795.t1 MTR_3g094670 45.455 264 129 7 1 259 65 318 1.02e-62 200
MS.gene35795.t1 MTR_5g083860 42.379 269 138 7 1 263 68 325 1.05e-62 200
MS.gene35795.t1 MTR_1g115900 42.322 267 141 6 1 263 64 321 1.52e-62 199
MS.gene35795.t1 MTR_5g074760 44.815 270 132 10 1 263 62 321 5.18e-62 198
MS.gene35795.t1 MTR_5g074740 44.444 270 133 10 1 263 62 321 8.60e-62 197
MS.gene35795.t1 MTR_7g026990 42.642 265 140 6 1 263 68 322 4.53e-61 196
MS.gene35795.t1 MTR_2g084000 40.000 265 149 4 1 263 63 319 9.71e-61 194
MS.gene35795.t1 MTR_3g094630 44.944 267 134 6 1 263 65 322 1.54e-60 194
MS.gene35795.t1 MTR_4g095450 41.573 267 144 6 1 262 64 323 2.19e-60 194
MS.gene35795.t1 MTR_6g043280 40.755 265 145 6 1 263 78 332 4.51e-60 193
MS.gene35795.t1 MTR_2g099175 38.722 266 153 5 3 263 75 335 6.79e-60 193
MS.gene35795.t1 MTR_1g090760 37.687 268 160 5 1 263 65 330 8.51e-60 192
MS.gene35795.t1 MTR_5g074860 43.542 271 132 10 1 262 66 324 1.14e-59 192
MS.gene35795.t1 MTR_8g062780 36.940 268 163 5 1 264 60 325 4.44e-59 191
MS.gene35795.t1 MTR_4g030890 40.977 266 150 6 1 264 137 397 4.55e-59 193
MS.gene35795.t1 MTR_4g031140 40.530 264 150 6 2 263 66 324 6.48e-59 191
MS.gene35795.t1 MTR_2g067440 37.457 291 152 3 1 262 97 386 1.99e-58 191
MS.gene35795.t1 MTR_5g074710 40.892 269 144 9 1 263 62 321 5.17e-58 187
MS.gene35795.t1 MTR_4g074990 38.433 268 137 7 1 263 61 305 1.07e-56 184
MS.gene35795.t1 MTR_3g467600 40.520 269 146 8 1 263 64 324 2.42e-56 183
MS.gene35795.t1 MTR_3g466180 40.755 265 146 5 1 263 68 323 3.55e-56 183
MS.gene35795.t1 MTR_6g043240 41.573 267 138 8 1 263 79 331 7.06e-56 183
MS.gene35795.t1 MTR_2g077990 36.986 292 151 5 1 260 113 403 9.48e-55 182
MS.gene35795.t1 MTR_1g009750 38.403 263 147 4 1 263 64 311 1.58e-53 176
MS.gene35795.t1 MTR_2g067450 39.245 265 152 4 3 262 49 309 1.95e-53 176
MS.gene35795.t1 MTR_3g105790 41.132 265 150 4 1 263 62 322 4.73e-53 175
MS.gene35795.t1 MTR_2g078610 35.959 292 154 5 1 260 113 403 1.80e-52 176
MS.gene35795.t1 MTR_2g008160 40.000 270 113 6 1 263 61 288 6.21e-52 171
MS.gene35795.t1 MTR_6g043460 36.704 267 156 7 1 264 73 329 1.79e-51 171
MS.gene35795.t1 MTR_4g074980 40.000 265 125 8 1 263 62 294 2.66e-51 169
MS.gene35795.t1 MTR_2g078280 36.299 281 146 5 1 249 113 392 1.97e-49 167
MS.gene35795.t1 MTR_4g132110 37.453 267 152 8 3 263 71 328 2.46e-48 163
MS.gene35795.t1 MTR_0286s0010 36.431 269 160 8 1 263 71 334 7.38e-48 162
MS.gene35795.t1 MTR_6g008075 36.431 269 160 8 1 263 71 334 7.38e-48 162
MS.gene35795.t1 MTR_4g074980 42.857 196 106 4 1 194 62 253 2.27e-47 158
MS.gene35795.t1 MTR_4g132110 36.765 272 152 9 3 263 71 333 5.63e-46 157
MS.gene35795.t1 MTR_1g066710 35.472 265 160 5 3 263 66 323 3.43e-45 154
MS.gene35795.t1 MTR_4g132490 33.457 269 166 5 1 263 66 327 8.16e-45 154
MS.gene35795.t1 MTR_0147s0010 32.500 280 155 5 3 262 116 381 1.12e-44 155
MS.gene35795.t1 MTR_2g008160 57.037 135 54 3 1 135 61 191 1.34e-44 149
MS.gene35795.t1 MTR_3g105790 40.496 242 138 4 25 263 8 246 6.82e-44 149
MS.gene35795.t1 MTR_5g074700 40.598 234 114 9 33 263 3 214 2.02e-42 144
MS.gene35795.t1 MTR_1g066380 33.585 265 165 5 3 263 66 323 2.74e-42 147
MS.gene35795.t1 MTR_5g033470 33.704 270 170 6 1 263 110 377 1.20e-41 147
MS.gene35795.t1 MTR_1g066680 33.962 265 164 5 3 263 65 322 1.22e-40 143
MS.gene35795.t1 MTR_2g029880 42.132 197 100 5 69 263 4 188 7.33e-40 137
MS.gene35795.t1 MTR_1g066640 33.585 265 165 5 3 263 66 323 8.51e-40 140
MS.gene35795.t1 MTR_1g066380 32.308 260 165 5 8 263 3 255 1.04e-37 133
MS.gene35795.t1 MTR_5g074860 35.185 270 117 9 1 262 66 285 4.05e-36 130
MS.gene35795.t1 MTR_3g072210 38.342 193 108 5 73 263 55 238 1.88e-34 124
MS.gene35795.t1 MTR_7g072490 33.475 236 92 6 10 243 2 174 3.74e-32 117
MS.gene35795.t1 MTR_7g086790 34.518 197 102 6 11 204 17 189 1.89e-27 105
MS.gene35795.t1 MTR_2g077980 29.758 289 161 8 15 264 1 286 1.98e-26 104
MS.gene35795.t1 MTR_2g078560 28.028 289 160 5 19 260 30 317 2.04e-26 105
MS.gene35795.t1 MTR_6g048160 58.209 67 26 1 3 69 22 86 5.41e-21 85.1
MS.gene35795.t1 MTR_4g114220 44.643 112 48 5 2 109 41 142 9.03e-21 85.9
MS.gene35795.t1 MTR_3g072260 59.155 71 27 2 1 69 63 133 2.15e-20 85.1
MS.gene35795.t1 MTR_7g107500 43.373 83 45 1 181 263 17 97 2.03e-17 75.9
MS.gene35795.t1 MTR_5g058120 31.548 168 102 4 92 259 1 155 2.43e-17 79.3
MS.gene35795.t1 MTR_7g086785 47.368 76 39 1 7 81 1 76 1.33e-16 74.7
MS.gene35795.t1 MTR_1g089005 51.852 81 32 2 1 74 52 132 3.09e-16 74.3
MS.gene35795.t1 MTR_7g086810 40.741 81 24 1 1 81 43 99 7.82e-14 69.3
MS.gene35795.t1 MTR_4g031040 49.180 61 31 0 72 132 25 85 2.95e-12 62.8
MS.gene35795.t1 MTR_1g098320 43.750 80 42 2 185 263 47 124 2.14e-11 60.8
MS.gene35795.t1 MTR_6g071110 35.577 104 55 2 19 122 70 161 2.60e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35795.t1 AT1G05260 70.833 264 77 0 1 264 63 326 2.64e-143 405
MS.gene35795.t1 AT4G11290 71.321 265 74 1 1 263 62 326 1.15e-141 401
MS.gene35795.t1 AT3G21770 68.321 262 83 0 1 262 66 327 1.23e-135 385
MS.gene35795.t1 AT5G15180 56.654 263 112 2 1 263 69 329 1.63e-105 309
MS.gene35795.t1 AT3G01190 58.555 263 105 3 1 263 63 321 3.65e-103 303
MS.gene35795.t1 AT1G05240 52.830 265 121 4 1 263 63 325 1.72e-94 281
MS.gene35795.t1 AT1G05250 52.830 265 121 4 1 263 63 325 1.72e-94 281
MS.gene35795.t1 AT2G18150 47.566 267 135 5 1 264 73 337 5.29e-82 249
MS.gene35795.t1 AT4G36430 46.816 267 137 5 1 264 67 331 1.12e-80 246
MS.gene35795.t1 AT2G39040 51.292 271 121 9 1 263 83 350 2.14e-79 243
MS.gene35795.t1 AT5G64120 46.768 263 134 5 1 263 72 328 3.94e-78 239
MS.gene35795.t1 AT5G14130 46.792 265 136 4 1 263 69 330 7.27e-78 239
MS.gene35795.t1 AT5G14130 46.792 265 136 4 1 263 110 371 2.47e-77 239
MS.gene35795.t1 AT2G18140 44.944 267 142 5 1 264 72 336 4.33e-77 237
MS.gene35795.t1 AT5G66390 47.191 267 136 5 1 264 70 334 6.05e-76 234
MS.gene35795.t1 AT1G49570 46.241 266 136 6 1 261 85 348 9.86e-76 234
MS.gene35795.t1 AT5G06730 44.195 267 143 5 1 263 70 334 1.97e-74 231
MS.gene35795.t1 AT3G50990 45.489 266 142 3 1 264 78 342 1.42e-73 228
MS.gene35795.t1 AT2G38390 45.522 268 139 6 1 263 68 333 1.47e-73 228
MS.gene35795.t1 AT3G03670 43.182 264 147 3 1 263 60 321 8.17e-73 226
MS.gene35795.t1 AT5G39580 45.076 264 138 6 1 263 62 319 1.93e-72 224
MS.gene35795.t1 AT5G06720 44.195 267 143 5 1 263 69 333 3.42e-72 224
MS.gene35795.t1 AT2G41480 44.944 267 139 5 1 263 66 328 4.63e-72 224
MS.gene35795.t1 AT5G51890 47.191 267 130 8 1 263 63 322 5.03e-72 224
MS.gene35795.t1 AT5G42180 43.726 263 141 5 1 262 60 316 1.27e-71 223
MS.gene35795.t1 AT5G17820 44.106 263 137 4 1 263 61 313 1.43e-71 222
MS.gene35795.t1 AT5G17820 44.106 263 137 4 1 263 114 366 2.53e-70 221
MS.gene35795.t1 AT2G38380 44.030 268 143 6 1 263 68 333 2.93e-70 220
MS.gene35795.t1 AT3G32980 42.222 270 148 6 1 264 68 335 1.45e-69 218
MS.gene35795.t1 AT1G44970 45.693 267 139 5 1 263 82 346 4.57e-69 217
MS.gene35795.t1 AT5G64110 42.264 265 146 4 1 263 71 330 9.30e-69 216
MS.gene35795.t1 AT4G08770 42.963 270 146 6 1 264 61 328 8.84e-68 213
MS.gene35795.t1 AT3G49110 42.963 270 146 6 1 264 70 337 1.16e-67 213
MS.gene35795.t1 AT5G19890 42.751 269 142 7 1 264 67 328 1.66e-67 212
MS.gene35795.t1 AT3G49120 42.593 270 147 6 1 264 69 336 2.78e-67 213
MS.gene35795.t1 AT2G24800 41.667 264 147 4 3 263 70 329 4.68e-66 209
MS.gene35795.t1 AT5G05340 42.481 266 142 5 1 263 67 324 6.75e-66 208
MS.gene35795.t1 AT5G58390 43.774 265 133 8 1 259 58 312 1.13e-65 207
MS.gene35795.t1 AT1G77100 43.071 267 140 5 1 263 61 319 4.23e-65 206
MS.gene35795.t1 AT4G25980 41.418 268 148 5 1 263 63 326 8.13e-65 205
MS.gene35795.t1 AT5G64100 42.481 266 142 6 1 263 74 331 2.06e-64 204
MS.gene35795.t1 AT1G14550 41.573 267 144 7 1 263 63 321 5.80e-64 203
MS.gene35795.t1 AT4G33420 41.288 264 142 6 1 263 74 325 7.64e-64 203
MS.gene35795.t1 AT4G08780 41.852 270 149 6 1 264 61 328 8.44e-64 203
MS.gene35795.t1 AT1G71695 43.446 267 139 7 1 263 81 339 1.17e-63 203
MS.gene35795.t1 AT5G19880 42.963 270 145 6 1 263 62 329 1.32e-63 202
MS.gene35795.t1 AT4G33420 41.288 264 142 6 1 263 121 372 3.15e-63 202
MS.gene35795.t1 AT2G18980 41.573 267 147 5 1 263 62 323 3.98e-63 201
MS.gene35795.t1 AT4G31760 42.593 270 139 8 1 263 66 326 2.65e-62 199
MS.gene35795.t1 AT1G14540 39.850 266 149 6 1 263 58 315 1.12e-61 197
MS.gene35795.t1 AT4G37530 41.636 269 148 6 1 263 64 329 3.23e-61 196
MS.gene35795.t1 AT4G16270 40.602 266 151 6 1 263 87 348 4.52e-61 196
MS.gene35795.t1 AT2G35380 39.194 273 152 5 1 263 67 335 4.86e-61 196
MS.gene35795.t1 AT1G68850 37.037 270 162 6 1 263 67 335 5.24e-61 196
MS.gene35795.t1 AT5G58400 41.887 265 138 8 1 259 67 321 2.60e-59 191
MS.gene35795.t1 AT4G26010 39.850 266 144 7 1 264 59 310 3.24e-59 190
MS.gene35795.t1 AT2G22420 39.773 264 152 6 2 263 61 319 4.31e-59 191
MS.gene35795.t1 AT4G26010 39.850 266 144 7 1 264 87 338 6.13e-59 191
MS.gene35795.t1 AT5G22410 39.394 264 148 7 1 259 65 321 1.08e-58 190
MS.gene35795.t1 AT5G67400 39.179 268 156 5 1 263 64 329 1.32e-58 189
MS.gene35795.t1 AT4G33870 36.395 294 149 5 3 260 107 398 1.90e-58 191
MS.gene35795.t1 AT4G37520 40.149 269 152 6 1 263 64 329 2.81e-58 189
MS.gene35795.t1 AT2G34060 39.245 265 154 4 1 259 79 342 7.03e-58 188
MS.gene35795.t1 AT5G24070 38.202 267 152 6 3 263 76 335 2.25e-57 187
MS.gene35795.t1 AT2G43480 37.736 265 156 4 3 263 76 335 3.76e-57 186
MS.gene35795.t1 AT1G30870 40.152 264 149 5 3 264 90 346 4.57e-57 186
MS.gene35795.t1 AT4G30170 38.202 267 156 5 1 263 64 325 6.94e-57 185
MS.gene35795.t1 AT4G17690 38.806 268 151 7 1 263 63 322 7.29e-57 185
MS.gene35795.t1 AT4G37520 40.149 269 149 7 1 263 64 326 1.55e-56 184
MS.gene35795.t1 AT3G49960 37.687 268 160 5 1 263 64 329 4.60e-55 180
MS.gene35795.t1 AT5G47000 38.971 272 148 8 1 264 70 331 1.39e-54 179
MS.gene35795.t1 AT1G34510 37.218 266 151 7 1 264 59 310 7.19e-53 174
MS.gene35795.t1 AT2G35380 37.751 249 142 4 24 263 3 247 5.28e-52 170
MS.gene35795.t1 AT4G37530 41.096 219 123 4 1 214 64 281 4.26e-51 169
MS.gene35795.t1 AT1G24110 35.688 269 164 5 1 264 59 323 6.80e-50 167
MS.gene35795.t1 AT5G40150 36.090 266 161 4 1 263 69 328 1.06e-49 166
MS.gene35795.t1 AT4G21960 35.472 265 160 6 3 263 70 327 1.60e-48 163
MS.gene35795.t1 AT3G28200 35.955 267 159 6 1 263 58 316 6.12e-48 161
MS.gene35795.t1 AT3G17070 33.708 267 171 5 1 263 75 339 1.49e-43 150
MS.gene35795.t1 AT2G37130 33.835 266 164 6 3 263 38 296 2.08e-41 144
MS.gene35795.t1 AT2G37130 33.835 266 164 6 3 263 69 327 4.31e-41 144
MS.gene35795.t1 AT3G17070 33.206 262 168 6 6 263 18 276 6.17e-40 140
MS.gene35795.t1 AT4G25980 43.103 174 90 4 1 168 108 278 3.85e-39 138
MS.gene35795.t1 AT5G39580 52.308 130 59 2 1 130 62 188 3.55e-37 131
MS.gene35795.t1 AT2G24800 45.669 127 67 1 1 127 68 192 4.29e-32 118
MS.gene35795.t1 AT3G42570 37.168 113 69 2 19 129 37 149 5.24e-16 73.6

Find 0 sgRNAs with CRISPR-Local

Find 75 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATACTTTCATTTCATTTT+TGG - 15124:3531-3550 MS.gene35795:CDS 15.0%
!! ACCTGAAAAAATTTAAATCA+TGG + 15124:4239-4258 None:intergenic 20.0%
!! TTCCAGTAAAATTGTATAAA+CGG + 15124:4303-4322 None:intergenic 20.0%
!!! AACATTAAGCATTTTGATTT+AGG - 15124:3580-3599 MS.gene35795:CDS 20.0%
!!! ACATTAAGCATTTTGATTTA+GGG - 15124:3581-3600 MS.gene35795:CDS 20.0%
!!! ACCATGATTTAAATTTTTTC+AGG - 15124:4235-4254 MS.gene35795:intron 20.0%
!!! TTATACAATTTTACTGGAAA+GGG - 15124:4304-4323 MS.gene35795:intron 20.0%
!!! TTTATACAATTTTACTGGAA+AGG - 15124:4303-4322 MS.gene35795:intron 20.0%
! ATTCTATCTTTAACAGACTA+AGG - 15124:3802-3821 MS.gene35795:CDS 25.0%
!! AACCGTTTATACAATTTTAC+TGG - 15124:4298-4317 MS.gene35795:intron 25.0%
!! TTTTAAATCAAGTCCTTGAT+TGG + 15124:4055-4074 None:intergenic 25.0%
AGCTTATCTACTGATACATT+TGG - 15124:3892-3911 MS.gene35795:intron 30.0%
ATAGAATTGAGTACTTACTG+TGG + 15124:3789-3808 None:intergenic 30.0%
CAATACTACAATAGTCGAAA+TGG - 15124:4399-4418 MS.gene35795:CDS 30.0%
GACAAGTTAAAGTTAAGACA+GGG - 15124:4605-4624 MS.gene35795:intron 30.0%
GCAAAATCAATGGAGAAAAT+GGG - 15124:4583-4602 MS.gene35795:intron 30.0%
GTTTGAAAATGATGTGCAAA+GGG + 15124:4281-4300 None:intergenic 30.0%
TGCAAAATCAATGGAGAAAA+TGG - 15124:4582-4601 MS.gene35795:intron 30.0%
TGCTGAATTTGCAAAATCAA+TGG - 15124:4573-4592 MS.gene35795:intron 30.0%
TTAAATAAGCCAATCCAAAC+AGG + 15124:3828-3847 None:intergenic 30.0%
! ACTTTCATGATTGCTTTGTT+AGG - 15124:3481-3500 MS.gene35795:CDS 30.0%
! ATTTGGTGATTTGTGATTTC+AGG - 15124:3909-3928 MS.gene35795:intron 30.0%
! CTTTCATGATTGCTTTGTTA+GGG - 15124:3482-3501 MS.gene35795:CDS 30.0%
! TTTGGTGATTTGTGATTTCA+GGG - 15124:3910-3929 MS.gene35795:intron 30.0%
! TTTTCCGTCTCTAATTATGT+CGG + 15124:4173-4192 None:intergenic 30.0%
!!! ATTTTGATTTAGGGATGTGA+TGG - 15124:3590-3609 MS.gene35795:CDS 30.0%
AAGCCTCTAACAGTAAGATT+TGG + 15124:3665-3684 None:intergenic 35.0%
AGTCGAAACACATTTGATCT+TGG - 15124:4430-4449 MS.gene35795:CDS 35.0%
ATCAAATGTGTTTCGACTTC+CGG + 15124:4428-4447 None:intergenic 35.0%
GCATATTCACTATCAAGTGA+TGG + 15124:4340-4359 None:intergenic 35.0%
GGACAAGTTAAAGTTAAGAC+AGG - 15124:4604-4623 MS.gene35795:intron 35.0%
GGTTTGAAAATGATGTGCAA+AGG + 15124:4282-4301 None:intergenic 35.0%
GTTACCGACATAATTAGAGA+CGG - 15124:4166-4185 MS.gene35795:CDS 35.0%
TGAATGTAGTATTACCAGAG+AGG + 15124:4089-4108 None:intergenic 35.0%
!! GTTGGTTTGTTGAGTTCAAA+AGG + 15124:3622-3641 None:intergenic 35.0%
!!! AATTTTCAAGTGAGCCTTGA+AGG + 15124:4549-4568 None:intergenic 35.0%
!!! GAGCATTTTTTTCAGCTTGT+TGG + 15124:3640-3659 None:intergenic 35.0%
AAAGTTAAGACAGGGTCACA+AGG - 15124:4613-4632 MS.gene35795:intron 40.0%
ATGTAGTATTACCAGAGAGG+AGG + 15124:4086-4105 None:intergenic 40.0%
ATTGGCAAAGAGAGTTTGGA+GGG + 15124:4037-4056 None:intergenic 40.0%
CAAACTCTCTTTGCCAATCA+AGG - 15124:4039-4058 MS.gene35795:intron 40.0%
CCATATTGGAAAGTTCCAAC+AGG - 15124:3937-3956 MS.gene35795:intron 40.0%
CCTCCAAATCTTACTGTTAG+AGG - 15124:3659-3678 MS.gene35795:CDS 40.0%
CCTCTAACAGTAAGATTTGG+AGG + 15124:3662-3681 None:intergenic 40.0%
CCTGTTGGAACTTTCCAATA+TGG + 15124:3940-3959 None:intergenic 40.0%
CTTGATTGGCAAAGAGAGTT+TGG + 15124:4041-4060 None:intergenic 40.0%
CTTGTGACTCAATTCCTTCA+AGG - 15124:4532-4551 MS.gene35795:intron 40.0%
GAAAGTTCCAACAGGTAGAA+GGG - 15124:3945-3964 MS.gene35795:intron 40.0%
TCAAATGTGTTTCGACTTCC+GGG + 15124:4427-4446 None:intergenic 40.0%
TGGAGTCGTATCGAATTTGT+TGG - 15124:3969-3988 MS.gene35795:intron 40.0%
TTAACAGACTAAGGCCTGTT+TGG - 15124:3811-3830 MS.gene35795:CDS 40.0%
! AGTCAAGTTGTCAAGAGAAG+AGG - 15124:4460-4479 MS.gene35795:CDS 40.0%
! GACGACGGTGCATAATTTTA+AGG + 15124:4119-4138 None:intergenic 40.0%
!!! TTTTCAGGTGCTCACACAAT+TGG - 15124:4250-4269 MS.gene35795:intron 40.0%
AAAGACTTAGTCCTCCTCTC+TGG - 15124:4072-4091 MS.gene35795:CDS 45.0%
ACAATAGTCGAAATGGACCC+CGG - 15124:4406-4425 MS.gene35795:CDS 45.0%
AGACTAAGGCCTGTTTGGAT+TGG - 15124:3816-3835 MS.gene35795:CDS 45.0%
AGGGTGGTGAAGTTGGAAAA+TGG + 15124:4018-4037 None:intergenic 45.0%
CAAATGTGTTTCGACTTCCG+GGG + 15124:4426-4445 None:intergenic 45.0%
CAGCACAAGAAACAACACCA+GGG + 15124:3730-3749 None:intergenic 45.0%
GATTGGCAAAGAGAGTTTGG+AGG + 15124:4038-4057 None:intergenic 45.0%
GATTTCAGGGTGGTCCATAT+TGG - 15124:3923-3942 MS.gene35795:intron 45.0%
GGAAAGTTCCAACAGGTAGA+AGG - 15124:3944-3963 MS.gene35795:intron 45.0%
GTGAAGTTGGAAAATGGAGC+AGG + 15124:4012-4031 None:intergenic 45.0%
TCAGCACAAGAAACAACACC+AGG + 15124:3731-3750 None:intergenic 45.0%
! GGTGATTTGTGATTTCAGGG+TGG - 15124:3913-3932 MS.gene35795:intron 45.0%
ACTCCATCCCTTCTACCTGT+TGG + 15124:3955-3974 None:intergenic 50.0%
AGTTTGGAGGGTGGTGAAGT+TGG + 15124:4025-4044 None:intergenic 50.0%
CAGGGTCACAAGGTGTGATT+AGG - 15124:4623-4642 MS.gene35795:intron 50.0%
CTTGTTGAAGCTGAATGCCC+TGG - 15124:3710-3729 MS.gene35795:CDS 50.0%
GTTCCAACAGGTAGAAGGGA+TGG - 15124:3949-3968 MS.gene35795:intron 50.0%
TGAATTAGCGTGCACGACGA+CGG + 15124:4134-4153 None:intergenic 50.0%
TGTGGCTGCAATAGAGTCTC+TGG + 15124:3771-3790 None:intergenic 50.0%
! CAGGGCATTCAGCTTCAACA+AGG + 15124:3712-3731 None:intergenic 50.0%
GGCAAAGAGAGTTTGGAGGG+TGG + 15124:4034-4053 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
15124 gene 3477 4672 3477 ID=MS.gene35795
15124 mRNA 3477 4672 3477 ID=MS.gene35795.t1;Parent=MS.gene35795
15124 exon 4646 4672 4646 ID=MS.gene35795.t1.exon1;Parent=MS.gene35795.t1
15124 CDS 4646 4672 4646 ID=cds.MS.gene35795.t1;Parent=MS.gene35795.t1
15124 exon 4359 4547 4359 ID=MS.gene35795.t1.exon2;Parent=MS.gene35795.t1
15124 CDS 4359 4547 4359 ID=cds.MS.gene35795.t1;Parent=MS.gene35795.t1
15124 exon 4056 4218 4056 ID=MS.gene35795.t1.exon3;Parent=MS.gene35795.t1
15124 CDS 4056 4218 4056 ID=cds.MS.gene35795.t1;Parent=MS.gene35795.t1
15124 exon 3477 3892 3477 ID=MS.gene35795.t1.exon4;Parent=MS.gene35795.t1
15124 CDS 3477 3892 3477 ID=cds.MS.gene35795.t1;Parent=MS.gene35795.t1
Gene Sequence

>MS.gene35795

ATGCACTTTCATGATTGCTTTGTTAGGGTATGAAGTTCAAGCTTAATTATATGCTTATACTTTCATTTCATTTTTGGTTATGTGATGTGAAAATTGATTCGCTAACATTAAGCATTTTGATTTAGGGATGTGATGGATCAGTCCTTTTGAACTCAACAAACCAACAAGCTGAAAAAAATGCTCCTCCAAATCTTACTGTTAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGTGTTGTTTCTTGTGCTGATATCATAGCTTTATCTGCCAGAGACTCTATTGCAGCCACAGTAAGTACTCAATTCTATCTTTAACAGACTAAGGCCTGTTTGGATTGGCTTATTTAAGCTTATCTACTGTTTATAAGCTCTTTAAGTAGCTTAAGATTGCAAGCTTATCTACTGATACATTTGGTGATTTGTGATTTCAGGGTGGTCCATATTGGAAAGTTCCAACAGGTAGAAGGGATGGAGTCGTATCGAATTTGTTGGAAGCAAATCAAAACATTCCTGCTCCATTTTCCAACTTCACCACCCTCCAAACTCTCTTTGCCAATCAAGGACTTGATTTAAAAGACTTAGTCCTCCTCTCTGGTAATACTACATTCAACAATTTCCTTAAAATTATGCACCGTCGTCGTGCACGCTAATTCATTACTAGAAAATGTTACCGACATAATTAGAGACGGAAAAAATGAAATAATTAGTGACACATTTTTATTTCAATTTTTGATGACCATGATTTAAATTTTTTCAGGTGCTCACACAATTGGTATCTCCCTTTGCACATCATTTTCAAACCGTTTATACAATTTTACTGGAAAGGGTGATCAAGATCCATCACTTGATAGTGAATATGCACAAAATCTAAAGACTTTCAAGTGCAAGAACATCAATGACAATACTACAATAGTCGAAATGGACCCCGGAAGTCGAAACACATTTGATCTTGGTTACTATAGTCAAGTTGTCAAGAGAAGAGGTTTGTTTCAGTCTGATTCTGCATTGTTGACAAATTCAGTTACAAAAGCTCTTGTGACTCAATTCCTTCAAGGCTCACTTGAAAATTTCTATGCTGAATTTGCAAAATCAATGGAGAAAATGGGACAAGTTAAAGTTAAGACAGGGTCACAAGGTGTGATTAGGAAGCATTGTGCACTTGTAAATAACTAA

Protein sequence

>MS.gene35795.t1

MHFHDCFVRGCDGSVLLNSTNQQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADIIALSARDSIAATGGPYWKVPTGRRDGVVSNLLEANQNIPAPFSNFTTLQTLFANQGLDLKDLVLLSGAHTIGISLCTSFSNRLYNFTGKGDQDPSLDSEYAQNLKTFKCKNINDNTTIVEMDPGSRNTFDLGYYSQVVKRRGLFQSDSALLTNSVTKALVTQFLQGSLENFYAEFAKSMEKMGQVKVKTGSQGVIRKHCALVNN