Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029047.t1 | RHN75585.1 | 96.6 | 264 | 9 | 0 | 1 | 264 | 124 | 387 | 1.30E-144 | 522.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029047.t1 | O23044 | 71.2 | 264 | 76 | 0 | 1 | 264 | 63 | 326 | 3.0e-110 | 399.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029047.t1 | G7IKK4 | 96.6 | 264 | 9 | 0 | 1 | 264 | 63 | 326 | 9.3e-145 | 522.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene48733 | MS.gene029047 | PPI |
| MS.gene029047 | MS.gene44482 | PPI |
| MS.gene87222 | MS.gene029047 | PPI |
| MS.gene029047 | MS.gene80170 | PPI |
| MS.gene029047 | MS.gene038655 | PPI |
| MS.gene029047 | MS.gene32635 | PPI |
| MS.gene67066 | MS.gene029047 | PPI |
| MS.gene029047 | MS.gene88044 | PPI |
| MS.gene029047 | MS.gene014924 | PPI |
| MS.gene029047 | MS.gene88144 | PPI |
| MS.gene029047 | MS.gene067613 | PPI |
| MS.gene71470 | MS.gene029047 | PPI |
| MS.gene029047 | MS.gene48746 | PPI |
| MS.gene029047 | MS.gene027436 | PPI |
| MS.gene029047 | MS.gene45786 | PPI |
| MS.gene51331 | MS.gene029047 | PPI |
| MS.gene029047 | MS.gene09575 | PPI |
| MS.gene32715 | MS.gene029047 | PPI |
| MS.gene043054 | MS.gene029047 | PPI |
| MS.gene029047 | MS.gene015231 | PPI |
| MS.gene014836 | MS.gene029047 | PPI |
| MS.gene014924 | MS.gene029047 | PPI |
| MS.gene029047 | MS.gene32715 | PPI |
| MS.gene69473 | MS.gene029047 | PPI |
| MS.gene029047 | MS.gene009198 | PPI |
| MS.gene029047 | MS.gene57204 | PPI |
| MS.gene029047 | MS.gene20276 | PPI |
| MS.gene029047 | MS.gene48740 | PPI |
| MS.gene029047 | MS.gene071108 | PPI |
| MS.gene029047 | MS.gene043043 | PPI |
| MS.gene029047 | MS.gene072888 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029047.t1 | MTR_2g088770 | 96.591 | 264 | 9 | 0 | 1 | 264 | 63 | 326 | 0.0 | 536 |
| MS.gene029047.t1 | MTR_4g046713 | 70.833 | 264 | 75 | 2 | 1 | 263 | 64 | 326 | 9.09e-143 | 404 |
| MS.gene029047.t1 | MTR_7g107520 | 56.818 | 264 | 108 | 4 | 1 | 263 | 62 | 320 | 2.04e-102 | 301 |
| MS.gene029047.t1 | MTR_5g017860 | 49.057 | 265 | 131 | 4 | 1 | 263 | 64 | 326 | 1.41e-85 | 258 |
| MS.gene029047.t1 | MTR_5g017850 | 47.547 | 265 | 135 | 4 | 1 | 263 | 64 | 326 | 1.34e-83 | 253 |
| MS.gene029047.t1 | MTR_2g029850 | 49.438 | 267 | 129 | 5 | 1 | 263 | 66 | 330 | 3.24e-82 | 251 |
| MS.gene029047.t1 | MTR_2g029820 | 48.881 | 268 | 131 | 5 | 1 | 264 | 66 | 331 | 6.03e-82 | 250 |
| MS.gene029047.t1 | MTR_5g022870 | 49.813 | 267 | 120 | 8 | 1 | 263 | 60 | 316 | 1.99e-80 | 245 |
| MS.gene029047.t1 | MTR_3g092990 | 49.813 | 267 | 129 | 5 | 1 | 264 | 63 | 327 | 2.01e-80 | 245 |
| MS.gene029047.t1 | MTR_2g040000 | 48.519 | 270 | 130 | 5 | 1 | 264 | 66 | 332 | 3.46e-80 | 245 |
| MS.gene029047.t1 | MTR_5g021060 | 49.064 | 267 | 131 | 5 | 1 | 264 | 67 | 331 | 1.22e-79 | 243 |
| MS.gene029047.t1 | MTR_2g029800 | 47.388 | 268 | 135 | 5 | 1 | 264 | 66 | 331 | 2.03e-79 | 243 |
| MS.gene029047.t1 | MTR_4g125940 | 47.015 | 268 | 134 | 5 | 1 | 263 | 10 | 274 | 2.06e-79 | 241 |
| MS.gene029047.t1 | MTR_2g029815 | 47.566 | 267 | 134 | 5 | 1 | 263 | 66 | 330 | 2.64e-79 | 243 |
| MS.gene029047.t1 | MTR_2g008710 | 48.120 | 266 | 131 | 4 | 1 | 263 | 64 | 325 | 2.68e-79 | 242 |
| MS.gene029047.t1 | MTR_8g075100 | 47.348 | 264 | 131 | 6 | 1 | 263 | 63 | 319 | 1.70e-78 | 240 |
| MS.gene029047.t1 | MTR_4g125940 | 47.015 | 268 | 134 | 5 | 1 | 263 | 65 | 329 | 2.22e-78 | 240 |
| MS.gene029047.t1 | MTR_2g029830 | 46.269 | 268 | 138 | 5 | 1 | 264 | 65 | 330 | 3.17e-78 | 241 |
| MS.gene029047.t1 | MTR_8g076820 | 47.547 | 265 | 136 | 3 | 1 | 263 | 67 | 330 | 5.21e-78 | 239 |
| MS.gene029047.t1 | MTR_1g025980 | 46.388 | 263 | 134 | 5 | 1 | 262 | 61 | 317 | 5.43e-77 | 236 |
| MS.gene029047.t1 | MTR_2g028980 | 46.067 | 267 | 138 | 5 | 1 | 263 | 66 | 330 | 7.34e-77 | 237 |
| MS.gene029047.t1 | MTR_1g101830 | 46.970 | 264 | 134 | 5 | 1 | 263 | 64 | 322 | 1.18e-76 | 235 |
| MS.gene029047.t1 | MTR_2g029860 | 47.940 | 267 | 133 | 5 | 1 | 263 | 66 | 330 | 3.09e-76 | 235 |
| MS.gene029047.t1 | MTR_1g054205 | 44.030 | 268 | 143 | 5 | 1 | 263 | 61 | 326 | 2.81e-75 | 232 |
| MS.gene029047.t1 | MTR_3g466200 | 46.642 | 268 | 129 | 7 | 1 | 263 | 62 | 320 | 3.16e-74 | 229 |
| MS.gene029047.t1 | MTR_2g029560 | 44.944 | 267 | 141 | 5 | 1 | 263 | 61 | 325 | 3.82e-74 | 230 |
| MS.gene029047.t1 | MTR_2g029730 | 45.693 | 267 | 139 | 5 | 1 | 263 | 62 | 326 | 5.38e-74 | 229 |
| MS.gene029047.t1 | MTR_4g029180 | 45.693 | 267 | 132 | 7 | 1 | 263 | 64 | 321 | 1.42e-73 | 228 |
| MS.gene029047.t1 | MTR_4g029170 | 45.318 | 267 | 133 | 7 | 1 | 263 | 64 | 321 | 2.68e-72 | 224 |
| MS.gene029047.t1 | MTR_2g029830 | 45.174 | 259 | 136 | 5 | 9 | 263 | 5 | 261 | 1.04e-71 | 221 |
| MS.gene029047.t1 | MTR_7g093370 | 44.403 | 268 | 142 | 5 | 1 | 263 | 106 | 371 | 1.72e-71 | 224 |
| MS.gene029047.t1 | MTR_3g092990 | 48.450 | 258 | 128 | 5 | 10 | 264 | 61 | 316 | 2.21e-71 | 222 |
| MS.gene029047.t1 | MTR_2g029740 | 44.944 | 267 | 141 | 5 | 1 | 263 | 66 | 330 | 3.04e-71 | 223 |
| MS.gene029047.t1 | MTR_1g038680 | 47.037 | 270 | 133 | 7 | 1 | 263 | 66 | 332 | 5.81e-71 | 221 |
| MS.gene029047.t1 | MTR_5g074970 | 46.468 | 269 | 129 | 7 | 1 | 263 | 67 | 326 | 1.21e-70 | 220 |
| MS.gene029047.t1 | MTR_3g094650 | 47.126 | 261 | 129 | 6 | 1 | 259 | 65 | 318 | 1.32e-70 | 220 |
| MS.gene029047.t1 | MTR_2g029910 | 45.149 | 268 | 140 | 6 | 1 | 263 | 67 | 332 | 2.22e-70 | 220 |
| MS.gene029047.t1 | MTR_4g114210 | 44.944 | 267 | 139 | 5 | 1 | 263 | 58 | 320 | 2.26e-70 | 219 |
| MS.gene029047.t1 | MTR_3g072190 | 44.151 | 265 | 137 | 5 | 1 | 263 | 63 | 318 | 3.15e-70 | 219 |
| MS.gene029047.t1 | MTR_5g016010 | 43.820 | 267 | 143 | 5 | 1 | 262 | 64 | 328 | 6.04e-70 | 218 |
| MS.gene029047.t1 | MTR_2g029750 | 44.569 | 267 | 142 | 5 | 1 | 263 | 66 | 330 | 7.34e-70 | 219 |
| MS.gene029047.t1 | MTR_7g029030 | 42.642 | 265 | 144 | 4 | 1 | 263 | 62 | 320 | 1.09e-69 | 218 |
| MS.gene029047.t1 | MTR_2g084080 | 44.906 | 265 | 135 | 5 | 1 | 263 | 62 | 317 | 1.34e-69 | 217 |
| MS.gene029047.t1 | MTR_2g084110 | 44.528 | 265 | 136 | 5 | 1 | 263 | 62 | 317 | 3.28e-69 | 216 |
| MS.gene029047.t1 | MTR_4g083710 | 42.481 | 266 | 145 | 6 | 1 | 263 | 64 | 324 | 6.99e-69 | 216 |
| MS.gene029047.t1 | MTR_1g022970 | 45.693 | 267 | 139 | 5 | 1 | 263 | 83 | 347 | 1.01e-68 | 216 |
| MS.gene029047.t1 | MTR_6g027440 | 43.609 | 266 | 138 | 6 | 1 | 263 | 58 | 314 | 3.61e-68 | 214 |
| MS.gene029047.t1 | MTR_2g084020 | 44.737 | 266 | 135 | 6 | 1 | 263 | 62 | 318 | 3.78e-68 | 213 |
| MS.gene029047.t1 | MTR_2g437770 | 43.939 | 264 | 138 | 6 | 1 | 263 | 87 | 341 | 4.37e-68 | 214 |
| MS.gene029047.t1 | MTR_4g029200 | 43.396 | 265 | 139 | 5 | 1 | 263 | 83 | 338 | 5.13e-68 | 214 |
| MS.gene029047.t1 | MTR_1g086320 | 44.815 | 270 | 139 | 7 | 1 | 263 | 67 | 333 | 5.46e-68 | 214 |
| MS.gene029047.t1 | MTR_7g072510 | 42.264 | 265 | 142 | 5 | 1 | 263 | 57 | 312 | 8.97e-68 | 212 |
| MS.gene029047.t1 | MTR_2g008160 | 44.944 | 267 | 139 | 5 | 1 | 263 | 61 | 323 | 1.62e-67 | 212 |
| MS.gene029047.t1 | MTR_4g133800 | 44.318 | 264 | 138 | 6 | 1 | 263 | 78 | 333 | 1.76e-67 | 212 |
| MS.gene029047.t1 | MTR_1g086490 | 43.116 | 276 | 142 | 6 | 1 | 263 | 67 | 340 | 2.32e-67 | 212 |
| MS.gene029047.t1 | MTR_2g084010 | 45.018 | 271 | 127 | 7 | 1 | 263 | 62 | 318 | 2.35e-67 | 211 |
| MS.gene029047.t1 | MTR_1g077000 | 40.152 | 264 | 145 | 6 | 1 | 263 | 76 | 327 | 2.49e-67 | 212 |
| MS.gene029047.t1 | MTR_7g072480 | 43.019 | 265 | 140 | 5 | 1 | 263 | 61 | 316 | 3.07e-67 | 211 |
| MS.gene029047.t1 | MTR_7g086820 | 40.977 | 266 | 144 | 6 | 1 | 263 | 57 | 312 | 7.33e-67 | 210 |
| MS.gene029047.t1 | MTR_2g008730 | 46.281 | 242 | 125 | 3 | 25 | 263 | 62 | 301 | 6.26e-66 | 207 |
| MS.gene029047.t1 | MTR_2g084090 | 43.985 | 266 | 137 | 6 | 1 | 263 | 62 | 318 | 1.29e-65 | 207 |
| MS.gene029047.t1 | MTR_0155s0040 | 42.424 | 264 | 139 | 8 | 1 | 263 | 64 | 315 | 2.57e-65 | 206 |
| MS.gene029047.t1 | MTR_1g009750 | 41.948 | 267 | 149 | 4 | 1 | 263 | 64 | 328 | 4.07e-65 | 206 |
| MS.gene029047.t1 | MTR_5g014100 | 41.392 | 273 | 146 | 5 | 1 | 263 | 63 | 331 | 1.68e-64 | 204 |
| MS.gene029047.t1 | MTR_4g074995 | 41.729 | 266 | 134 | 7 | 1 | 263 | 61 | 308 | 2.61e-64 | 203 |
| MS.gene029047.t1 | MTR_4g127670 | 41.948 | 267 | 147 | 5 | 1 | 263 | 61 | 323 | 3.31e-64 | 204 |
| MS.gene029047.t1 | MTR_3g072190 | 42.471 | 259 | 138 | 5 | 7 | 263 | 2 | 251 | 3.52e-64 | 201 |
| MS.gene029047.t1 | MTR_4g087965 | 42.105 | 266 | 145 | 6 | 3 | 261 | 81 | 344 | 4.27e-64 | 204 |
| MS.gene029047.t1 | MTR_4g122640 | 43.071 | 267 | 143 | 7 | 1 | 263 | 75 | 336 | 4.67e-64 | 204 |
| MS.gene029047.t1 | MTR_5g049280 | 39.852 | 271 | 152 | 9 | 1 | 263 | 70 | 337 | 1.18e-63 | 202 |
| MS.gene029047.t1 | MTR_4g029190 | 40.602 | 266 | 147 | 5 | 1 | 263 | 83 | 340 | 1.24e-63 | 202 |
| MS.gene029047.t1 | MTR_5g083860 | 42.379 | 269 | 138 | 7 | 1 | 263 | 68 | 325 | 3.38e-63 | 201 |
| MS.gene029047.t1 | MTR_3g094670 | 45.455 | 264 | 129 | 7 | 1 | 259 | 65 | 318 | 1.02e-62 | 200 |
| MS.gene029047.t1 | MTR_1g115900 | 43.284 | 268 | 137 | 8 | 1 | 263 | 64 | 321 | 2.33e-62 | 199 |
| MS.gene029047.t1 | MTR_7g086870 | 40.000 | 265 | 147 | 6 | 1 | 264 | 59 | 312 | 2.47e-62 | 198 |
| MS.gene029047.t1 | MTR_5g074760 | 44.815 | 270 | 132 | 10 | 1 | 263 | 62 | 321 | 3.83e-62 | 198 |
| MS.gene029047.t1 | MTR_5g074740 | 44.444 | 270 | 133 | 10 | 1 | 263 | 62 | 321 | 6.16e-62 | 198 |
| MS.gene029047.t1 | MTR_4g095450 | 41.948 | 267 | 143 | 6 | 1 | 262 | 64 | 323 | 9.48e-62 | 197 |
| MS.gene029047.t1 | MTR_2g084000 | 40.602 | 266 | 146 | 6 | 1 | 263 | 63 | 319 | 7.26e-61 | 195 |
| MS.gene029047.t1 | MTR_7g026990 | 42.642 | 265 | 140 | 6 | 1 | 263 | 68 | 322 | 8.56e-61 | 195 |
| MS.gene029047.t1 | MTR_3g094630 | 44.944 | 267 | 134 | 6 | 1 | 263 | 65 | 322 | 1.81e-60 | 194 |
| MS.gene029047.t1 | MTR_1g090760 | 37.687 | 268 | 160 | 5 | 1 | 263 | 65 | 330 | 3.96e-60 | 193 |
| MS.gene029047.t1 | MTR_5g074860 | 43.542 | 271 | 132 | 10 | 1 | 262 | 66 | 324 | 8.25e-60 | 192 |
| MS.gene029047.t1 | MTR_6g043280 | 40.377 | 265 | 146 | 6 | 1 | 263 | 78 | 332 | 1.10e-59 | 192 |
| MS.gene029047.t1 | MTR_2g099175 | 38.722 | 266 | 153 | 5 | 3 | 263 | 75 | 335 | 1.28e-59 | 192 |
| MS.gene029047.t1 | MTR_8g062780 | 36.940 | 268 | 163 | 5 | 1 | 264 | 60 | 325 | 1.92e-59 | 191 |
| MS.gene029047.t1 | MTR_2g067440 | 37.801 | 291 | 151 | 3 | 1 | 262 | 97 | 386 | 4.93e-59 | 192 |
| MS.gene029047.t1 | MTR_4g030890 | 40.977 | 266 | 150 | 6 | 1 | 264 | 137 | 397 | 5.57e-59 | 193 |
| MS.gene029047.t1 | MTR_4g031140 | 40.530 | 264 | 150 | 6 | 2 | 263 | 66 | 324 | 8.47e-59 | 190 |
| MS.gene029047.t1 | MTR_5g074710 | 41.852 | 270 | 140 | 10 | 1 | 263 | 62 | 321 | 3.74e-58 | 188 |
| MS.gene029047.t1 | MTR_4g074990 | 38.806 | 268 | 136 | 7 | 1 | 263 | 61 | 305 | 2.55e-57 | 185 |
| MS.gene029047.t1 | MTR_6g043240 | 41.948 | 267 | 137 | 8 | 1 | 263 | 79 | 331 | 6.17e-57 | 186 |
| MS.gene029047.t1 | MTR_3g467600 | 41.852 | 270 | 141 | 9 | 1 | 263 | 64 | 324 | 1.46e-56 | 184 |
| MS.gene029047.t1 | MTR_3g466180 | 40.755 | 265 | 146 | 5 | 1 | 263 | 68 | 323 | 3.55e-56 | 183 |
| MS.gene029047.t1 | MTR_2g077990 | 37.329 | 292 | 150 | 5 | 1 | 260 | 113 | 403 | 2.37e-55 | 183 |
| MS.gene029047.t1 | MTR_1g009750 | 38.783 | 263 | 146 | 4 | 1 | 263 | 64 | 311 | 1.26e-54 | 179 |
| MS.gene029047.t1 | MTR_3g105790 | 41.132 | 265 | 150 | 4 | 1 | 263 | 62 | 322 | 1.69e-53 | 176 |
| MS.gene029047.t1 | MTR_2g067450 | 39.245 | 265 | 152 | 4 | 3 | 262 | 49 | 309 | 1.95e-53 | 176 |
| MS.gene029047.t1 | MTR_2g078610 | 36.301 | 292 | 153 | 5 | 1 | 260 | 113 | 403 | 4.72e-53 | 177 |
| MS.gene029047.t1 | MTR_2g008160 | 40.075 | 267 | 117 | 5 | 1 | 263 | 61 | 288 | 1.26e-52 | 173 |
| MS.gene029047.t1 | MTR_6g043460 | 37.079 | 267 | 155 | 7 | 1 | 264 | 73 | 329 | 2.53e-52 | 174 |
| MS.gene029047.t1 | MTR_4g074980 | 40.377 | 265 | 124 | 8 | 1 | 263 | 62 | 294 | 6.09e-52 | 171 |
| MS.gene029047.t1 | MTR_2g078280 | 36.655 | 281 | 145 | 5 | 1 | 249 | 113 | 392 | 5.01e-50 | 169 |
| MS.gene029047.t1 | MTR_4g132110 | 37.453 | 267 | 152 | 8 | 3 | 263 | 71 | 328 | 1.73e-48 | 163 |
| MS.gene029047.t1 | MTR_0286s0010 | 36.431 | 269 | 160 | 8 | 1 | 263 | 71 | 334 | 5.02e-48 | 162 |
| MS.gene029047.t1 | MTR_6g008075 | 36.431 | 269 | 160 | 8 | 1 | 263 | 71 | 334 | 5.02e-48 | 162 |
| MS.gene029047.t1 | MTR_4g074980 | 42.857 | 196 | 106 | 4 | 1 | 194 | 62 | 253 | 2.27e-47 | 158 |
| MS.gene029047.t1 | MTR_4g132110 | 36.765 | 272 | 152 | 9 | 3 | 263 | 71 | 333 | 3.92e-46 | 157 |
| MS.gene029047.t1 | MTR_1g066710 | 35.472 | 265 | 160 | 5 | 3 | 263 | 66 | 323 | 2.41e-45 | 155 |
| MS.gene029047.t1 | MTR_0147s0010 | 32.500 | 280 | 155 | 5 | 3 | 262 | 116 | 381 | 9.25e-45 | 155 |
| MS.gene029047.t1 | MTR_4g132490 | 33.457 | 269 | 166 | 5 | 1 | 263 | 66 | 327 | 1.19e-44 | 153 |
| MS.gene029047.t1 | MTR_2g008160 | 57.037 | 135 | 54 | 3 | 1 | 135 | 61 | 191 | 1.34e-44 | 149 |
| MS.gene029047.t1 | MTR_3g105790 | 40.496 | 242 | 138 | 4 | 25 | 263 | 8 | 246 | 2.46e-44 | 150 |
| MS.gene029047.t1 | MTR_5g074700 | 40.598 | 234 | 114 | 9 | 33 | 263 | 3 | 214 | 1.60e-42 | 144 |
| MS.gene029047.t1 | MTR_1g066380 | 33.585 | 265 | 165 | 5 | 3 | 263 | 66 | 323 | 1.91e-42 | 147 |
| MS.gene029047.t1 | MTR_5g033470 | 33.704 | 270 | 170 | 6 | 1 | 263 | 110 | 377 | 4.42e-42 | 148 |
| MS.gene029047.t1 | MTR_2g029880 | 42.640 | 197 | 99 | 5 | 69 | 263 | 4 | 188 | 3.99e-41 | 141 |
| MS.gene029047.t1 | MTR_1g066680 | 33.585 | 265 | 165 | 5 | 3 | 263 | 65 | 322 | 9.28e-41 | 143 |
| MS.gene029047.t1 | MTR_1g066640 | 33.585 | 265 | 165 | 5 | 3 | 263 | 66 | 323 | 5.94e-40 | 141 |
| MS.gene029047.t1 | MTR_1g066380 | 32.308 | 260 | 165 | 5 | 8 | 263 | 3 | 255 | 7.32e-38 | 134 |
| MS.gene029047.t1 | MTR_5g074860 | 35.185 | 270 | 117 | 9 | 1 | 262 | 66 | 285 | 2.86e-36 | 130 |
| MS.gene029047.t1 | MTR_3g072210 | 38.342 | 193 | 108 | 5 | 73 | 263 | 55 | 238 | 2.00e-34 | 124 |
| MS.gene029047.t1 | MTR_7g072490 | 33.898 | 236 | 91 | 6 | 10 | 243 | 2 | 174 | 3.52e-33 | 120 |
| MS.gene029047.t1 | MTR_7g086790 | 34.518 | 197 | 102 | 6 | 11 | 204 | 17 | 189 | 1.89e-27 | 105 |
| MS.gene029047.t1 | MTR_2g077980 | 30.104 | 289 | 160 | 8 | 15 | 264 | 1 | 286 | 5.09e-27 | 106 |
| MS.gene029047.t1 | MTR_2g078560 | 28.374 | 289 | 159 | 5 | 19 | 260 | 30 | 317 | 5.24e-27 | 107 |
| MS.gene029047.t1 | MTR_6g048160 | 58.209 | 67 | 26 | 1 | 3 | 69 | 22 | 86 | 5.41e-21 | 85.1 |
| MS.gene029047.t1 | MTR_4g114220 | 44.643 | 112 | 48 | 5 | 2 | 109 | 41 | 142 | 9.03e-21 | 85.9 |
| MS.gene029047.t1 | MTR_3g072260 | 59.155 | 71 | 27 | 2 | 1 | 69 | 63 | 133 | 2.15e-20 | 85.1 |
| MS.gene029047.t1 | MTR_7g107500 | 44.578 | 83 | 44 | 1 | 181 | 263 | 17 | 97 | 3.07e-18 | 77.8 |
| MS.gene029047.t1 | MTR_5g058120 | 32.143 | 168 | 101 | 4 | 92 | 259 | 1 | 155 | 4.20e-18 | 81.6 |
| MS.gene029047.t1 | MTR_7g086785 | 47.368 | 76 | 39 | 1 | 7 | 81 | 1 | 76 | 1.33e-16 | 74.7 |
| MS.gene029047.t1 | MTR_1g089005 | 51.852 | 81 | 32 | 2 | 1 | 74 | 52 | 132 | 3.09e-16 | 74.3 |
| MS.gene029047.t1 | MTR_7g086810 | 40.741 | 81 | 24 | 1 | 1 | 81 | 43 | 99 | 7.82e-14 | 69.3 |
| MS.gene029047.t1 | MTR_4g031040 | 49.180 | 61 | 31 | 0 | 72 | 132 | 25 | 85 | 2.95e-12 | 62.8 |
| MS.gene029047.t1 | MTR_6g071110 | 35.577 | 104 | 55 | 2 | 19 | 122 | 70 | 161 | 2.60e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029047.t1 | AT1G05260 | 71.212 | 264 | 76 | 0 | 1 | 264 | 63 | 326 | 2.28e-144 | 407 |
| MS.gene029047.t1 | AT4G11290 | 71.321 | 265 | 74 | 1 | 1 | 263 | 62 | 326 | 1.19e-141 | 400 |
| MS.gene029047.t1 | AT3G21770 | 68.702 | 262 | 82 | 0 | 1 | 262 | 66 | 327 | 1.70e-136 | 388 |
| MS.gene029047.t1 | AT5G15180 | 57.034 | 263 | 111 | 2 | 1 | 263 | 69 | 329 | 6.60e-106 | 310 |
| MS.gene029047.t1 | AT3G01190 | 58.555 | 263 | 105 | 3 | 1 | 263 | 63 | 321 | 4.69e-103 | 303 |
| MS.gene029047.t1 | AT1G05240 | 52.075 | 265 | 123 | 3 | 1 | 263 | 63 | 325 | 1.35e-94 | 281 |
| MS.gene029047.t1 | AT1G05250 | 52.075 | 265 | 123 | 3 | 1 | 263 | 63 | 325 | 1.35e-94 | 281 |
| MS.gene029047.t1 | AT2G18150 | 47.566 | 267 | 135 | 5 | 1 | 264 | 73 | 337 | 5.47e-82 | 249 |
| MS.gene029047.t1 | AT4G36430 | 46.816 | 267 | 137 | 5 | 1 | 264 | 67 | 331 | 1.05e-80 | 246 |
| MS.gene029047.t1 | AT2G39040 | 50.554 | 271 | 123 | 8 | 1 | 263 | 83 | 350 | 1.82e-79 | 243 |
| MS.gene029047.t1 | AT5G64120 | 47.148 | 263 | 133 | 5 | 1 | 263 | 72 | 328 | 5.52e-79 | 241 |
| MS.gene029047.t1 | AT5G14130 | 46.792 | 265 | 136 | 4 | 1 | 263 | 69 | 330 | 2.62e-77 | 237 |
| MS.gene029047.t1 | AT2G18140 | 44.944 | 267 | 142 | 5 | 1 | 264 | 72 | 336 | 4.52e-77 | 237 |
| MS.gene029047.t1 | AT5G14130 | 46.792 | 265 | 136 | 4 | 1 | 263 | 110 | 371 | 8.94e-77 | 237 |
| MS.gene029047.t1 | AT5G66390 | 47.191 | 267 | 136 | 5 | 1 | 264 | 70 | 334 | 2.80e-76 | 235 |
| MS.gene029047.t1 | AT1G49570 | 46.241 | 266 | 136 | 6 | 1 | 261 | 85 | 348 | 5.49e-76 | 234 |
| MS.gene029047.t1 | AT5G06730 | 44.569 | 267 | 142 | 5 | 1 | 263 | 70 | 334 | 1.40e-75 | 234 |
| MS.gene029047.t1 | AT2G38390 | 45.896 | 268 | 138 | 6 | 1 | 263 | 68 | 333 | 9.73e-75 | 231 |
| MS.gene029047.t1 | AT3G50990 | 45.489 | 266 | 142 | 3 | 1 | 264 | 78 | 342 | 2.34e-73 | 228 |
| MS.gene029047.t1 | AT3G03670 | 43.182 | 264 | 147 | 3 | 1 | 263 | 60 | 321 | 8.17e-73 | 226 |
| MS.gene029047.t1 | AT5G51890 | 47.191 | 267 | 130 | 8 | 1 | 263 | 63 | 322 | 2.31e-72 | 224 |
| MS.gene029047.t1 | AT2G41480 | 44.944 | 267 | 139 | 5 | 1 | 263 | 66 | 328 | 4.94e-72 | 224 |
| MS.gene029047.t1 | AT5G06720 | 43.820 | 267 | 144 | 5 | 1 | 263 | 69 | 333 | 1.13e-71 | 223 |
| MS.gene029047.t1 | AT5G39580 | 44.697 | 264 | 139 | 6 | 1 | 263 | 62 | 319 | 1.25e-71 | 223 |
| MS.gene029047.t1 | AT2G38380 | 44.403 | 268 | 142 | 6 | 1 | 263 | 68 | 333 | 1.29e-71 | 223 |
| MS.gene029047.t1 | AT5G17820 | 44.106 | 263 | 137 | 4 | 1 | 263 | 61 | 313 | 1.78e-71 | 222 |
| MS.gene029047.t1 | AT5G42180 | 43.726 | 263 | 141 | 5 | 1 | 262 | 60 | 316 | 2.77e-71 | 221 |
| MS.gene029047.t1 | AT5G17820 | 44.106 | 263 | 137 | 4 | 1 | 263 | 114 | 366 | 3.18e-70 | 220 |
| MS.gene029047.t1 | AT3G32980 | 42.222 | 270 | 148 | 6 | 1 | 264 | 68 | 335 | 1.34e-69 | 218 |
| MS.gene029047.t1 | AT1G44970 | 45.693 | 267 | 139 | 5 | 1 | 263 | 82 | 346 | 1.69e-69 | 218 |
| MS.gene029047.t1 | AT5G64110 | 42.264 | 265 | 146 | 4 | 1 | 263 | 71 | 330 | 2.99e-69 | 217 |
| MS.gene029047.t1 | AT3G49110 | 43.333 | 270 | 145 | 6 | 1 | 264 | 70 | 337 | 1.65e-68 | 216 |
| MS.gene029047.t1 | AT3G49120 | 42.963 | 270 | 146 | 6 | 1 | 264 | 69 | 336 | 3.98e-68 | 214 |
| MS.gene029047.t1 | AT5G19890 | 42.751 | 269 | 142 | 7 | 1 | 264 | 67 | 328 | 5.89e-68 | 213 |
| MS.gene029047.t1 | AT4G08770 | 42.963 | 270 | 146 | 6 | 1 | 264 | 61 | 328 | 8.28e-68 | 214 |
| MS.gene029047.t1 | AT2G24800 | 41.667 | 264 | 147 | 4 | 3 | 263 | 70 | 329 | 3.54e-66 | 209 |
| MS.gene029047.t1 | AT5G05340 | 42.481 | 266 | 142 | 5 | 1 | 263 | 67 | 324 | 3.85e-66 | 209 |
| MS.gene029047.t1 | AT5G58390 | 43.774 | 265 | 133 | 8 | 1 | 259 | 58 | 312 | 1.65e-65 | 207 |
| MS.gene029047.t1 | AT4G25980 | 41.791 | 268 | 147 | 5 | 1 | 263 | 63 | 326 | 2.22e-65 | 207 |
| MS.gene029047.t1 | AT2G18980 | 42.322 | 267 | 145 | 5 | 1 | 263 | 62 | 323 | 8.59e-65 | 205 |
| MS.gene029047.t1 | AT4G33420 | 41.667 | 264 | 141 | 6 | 1 | 263 | 74 | 325 | 9.20e-65 | 205 |
| MS.gene029047.t1 | AT4G08780 | 42.222 | 270 | 148 | 6 | 1 | 264 | 61 | 328 | 1.20e-64 | 206 |
| MS.gene029047.t1 | AT5G64100 | 42.481 | 266 | 142 | 6 | 1 | 263 | 74 | 331 | 1.43e-64 | 205 |
| MS.gene029047.t1 | AT1G77100 | 42.697 | 267 | 141 | 5 | 1 | 263 | 61 | 319 | 1.48e-64 | 204 |
| MS.gene029047.t1 | AT5G19880 | 43.333 | 270 | 144 | 6 | 1 | 263 | 62 | 329 | 1.69e-64 | 204 |
| MS.gene029047.t1 | AT4G33420 | 41.667 | 264 | 141 | 6 | 1 | 263 | 121 | 372 | 3.86e-64 | 205 |
| MS.gene029047.t1 | AT1G71695 | 43.446 | 267 | 139 | 7 | 1 | 263 | 81 | 339 | 4.16e-64 | 204 |
| MS.gene029047.t1 | AT1G14550 | 41.573 | 267 | 144 | 7 | 1 | 263 | 63 | 321 | 9.33e-64 | 202 |
| MS.gene029047.t1 | AT4G31760 | 42.593 | 270 | 139 | 8 | 1 | 263 | 66 | 326 | 1.58e-62 | 199 |
| MS.gene029047.t1 | AT4G37530 | 41.045 | 268 | 151 | 5 | 1 | 263 | 64 | 329 | 7.22e-62 | 198 |
| MS.gene029047.t1 | AT4G16270 | 40.602 | 266 | 151 | 6 | 1 | 263 | 87 | 348 | 1.28e-61 | 198 |
| MS.gene029047.t1 | AT2G35380 | 39.194 | 273 | 152 | 5 | 1 | 263 | 67 | 335 | 2.17e-61 | 197 |
| MS.gene029047.t1 | AT1G68850 | 37.037 | 270 | 162 | 6 | 1 | 263 | 67 | 335 | 4.81e-61 | 196 |
| MS.gene029047.t1 | AT1G14540 | 39.474 | 266 | 150 | 6 | 1 | 263 | 58 | 315 | 8.08e-61 | 195 |
| MS.gene029047.t1 | AT5G67400 | 39.552 | 268 | 155 | 5 | 1 | 263 | 64 | 329 | 1.53e-59 | 192 |
| MS.gene029047.t1 | AT4G26010 | 39.850 | 266 | 144 | 7 | 1 | 264 | 59 | 310 | 1.91e-59 | 191 |
| MS.gene029047.t1 | AT4G26010 | 39.850 | 266 | 144 | 7 | 1 | 264 | 87 | 338 | 3.62e-59 | 191 |
| MS.gene029047.t1 | AT2G22420 | 40.152 | 264 | 151 | 6 | 2 | 263 | 61 | 319 | 3.83e-59 | 191 |
| MS.gene029047.t1 | AT5G58400 | 41.887 | 265 | 138 | 8 | 1 | 259 | 67 | 321 | 4.26e-59 | 191 |
| MS.gene029047.t1 | AT4G37520 | 39.552 | 268 | 155 | 5 | 1 | 263 | 64 | 329 | 5.96e-59 | 190 |
| MS.gene029047.t1 | AT4G33870 | 36.395 | 294 | 149 | 5 | 3 | 260 | 107 | 398 | 7.09e-59 | 192 |
| MS.gene029047.t1 | AT4G30170 | 38.577 | 267 | 155 | 5 | 1 | 263 | 64 | 325 | 4.86e-58 | 188 |
| MS.gene029047.t1 | AT5G22410 | 39.015 | 264 | 149 | 7 | 1 | 259 | 65 | 321 | 1.43e-57 | 187 |
| MS.gene029047.t1 | AT1G30870 | 40.152 | 264 | 149 | 5 | 3 | 264 | 90 | 346 | 1.51e-57 | 187 |
| MS.gene029047.t1 | AT2G34060 | 39.245 | 265 | 154 | 4 | 1 | 259 | 79 | 342 | 1.89e-57 | 187 |
| MS.gene029047.t1 | AT4G37520 | 39.552 | 268 | 152 | 6 | 1 | 263 | 64 | 326 | 3.36e-57 | 186 |
| MS.gene029047.t1 | AT4G17690 | 38.806 | 268 | 151 | 7 | 1 | 263 | 63 | 322 | 4.03e-57 | 186 |
| MS.gene029047.t1 | AT5G24070 | 38.202 | 267 | 152 | 6 | 3 | 263 | 76 | 335 | 4.15e-57 | 186 |
| MS.gene029047.t1 | AT2G43480 | 37.736 | 265 | 156 | 4 | 3 | 263 | 76 | 335 | 7.48e-57 | 185 |
| MS.gene029047.t1 | AT3G49960 | 38.060 | 268 | 159 | 5 | 1 | 263 | 64 | 329 | 4.51e-56 | 183 |
| MS.gene029047.t1 | AT5G47000 | 39.927 | 273 | 144 | 9 | 1 | 264 | 70 | 331 | 2.94e-55 | 181 |
| MS.gene029047.t1 | AT1G34510 | 37.218 | 266 | 151 | 7 | 1 | 264 | 59 | 310 | 4.34e-53 | 175 |
| MS.gene029047.t1 | AT2G35380 | 37.751 | 249 | 142 | 4 | 24 | 263 | 3 | 247 | 2.48e-52 | 171 |
| MS.gene029047.t1 | AT4G37530 | 41.096 | 219 | 123 | 4 | 1 | 214 | 64 | 281 | 4.26e-51 | 169 |
| MS.gene029047.t1 | AT1G24110 | 35.688 | 269 | 164 | 5 | 1 | 264 | 59 | 323 | 2.03e-50 | 168 |
| MS.gene029047.t1 | AT5G40150 | 36.090 | 266 | 161 | 4 | 1 | 263 | 69 | 328 | 1.10e-49 | 166 |
| MS.gene029047.t1 | AT4G21960 | 35.472 | 265 | 160 | 6 | 3 | 263 | 70 | 327 | 1.14e-48 | 164 |
| MS.gene029047.t1 | AT3G28200 | 35.955 | 267 | 159 | 6 | 1 | 263 | 58 | 316 | 1.18e-48 | 163 |
| MS.gene029047.t1 | AT3G17070 | 33.708 | 267 | 171 | 5 | 1 | 263 | 75 | 339 | 1.53e-43 | 150 |
| MS.gene029047.t1 | AT2G37130 | 33.835 | 266 | 164 | 6 | 3 | 263 | 38 | 296 | 3.02e-41 | 144 |
| MS.gene029047.t1 | AT2G37130 | 33.835 | 266 | 164 | 6 | 3 | 263 | 69 | 327 | 6.25e-41 | 144 |
| MS.gene029047.t1 | AT3G17070 | 33.206 | 262 | 168 | 6 | 6 | 263 | 18 | 276 | 6.37e-40 | 140 |
| MS.gene029047.t1 | AT4G25980 | 43.103 | 174 | 90 | 4 | 1 | 168 | 108 | 278 | 3.85e-39 | 138 |
| MS.gene029047.t1 | AT5G39580 | 52.308 | 130 | 59 | 2 | 1 | 130 | 62 | 188 | 3.55e-37 | 131 |
| MS.gene029047.t1 | AT2G24800 | 45.669 | 127 | 67 | 1 | 1 | 127 | 68 | 192 | 4.29e-32 | 118 |
| MS.gene029047.t1 | AT3G42570 | 37.168 | 113 | 69 | 2 | 19 | 129 | 37 | 149 | 5.24e-16 | 73.6 |
Find 50 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAATCAATGGAGAAAA+TGG | 0.079582 | 2.4:-12131029 | MS.gene029047:CDS |
| CCTCCAAATCTTACTGTTAG+AGG | 0.255087 | 2.4:-12131976 | MS.gene029047:CDS |
| ATCAAATGTGTTTCGACTTC+CGG | 0.258605 | 2.4:+12131186 | None:intergenic |
| CTTGATTGGCAAAGAGAGTT+TGG | 0.269943 | 2.4:+12131593 | None:intergenic |
| ACTTTCATGATTGCTTTGTT+AGG | 0.271511 | 2.4:-12132154 | MS.gene029047:CDS |
| TCTTACACTTGAATGTCTTT+AGG | 0.278429 | 2.4:+12131245 | None:intergenic |
| TCAAATGTGTTTCGACTTCC+GGG | 0.337076 | 2.4:+12131187 | None:intergenic |
| CTTTCATGATTGCTTTGTTA+GGG | 0.352765 | 2.4:-12132153 | MS.gene029047:intron |
| AGTTTGGAGGGTGGTGAAGT+TGG | 0.356287 | 2.4:+12131609 | None:intergenic |
| AAAGACTTAGTCCTCCTATC+TGG | 0.364479 | 2.4:-12131559 | MS.gene029047:intron |
| GGAAAGTTCCAACAGGTAGA+AGG | 0.373285 | 2.4:-12131687 | MS.gene029047:CDS |
| GATTTCAGGGTGGTCCATAT+TGG | 0.381350 | 2.4:-12131708 | MS.gene029047:intron |
| CCTGTTGGAACTTTCCAATA+TGG | 0.384950 | 2.4:+12131694 | None:intergenic |
| AAGCCTCTAACAGTAAGATT+TGG | 0.388544 | 2.4:+12131973 | None:intergenic |
| AAGTTTCAAGTGAGCCTTGA+AGG | 0.403365 | 2.4:+12131065 | None:intergenic |
| AGTCGAAACACATTTGATCT+TGG | 0.404166 | 2.4:-12131181 | MS.gene029047:CDS |
| CAGGGTCACAAGGTGTGATT+AGG | 0.404815 | 2.4:-12130988 | MS.gene029047:CDS |
| CAATACCACAATAGTCGAAA+TGG | 0.409754 | 2.4:-12131212 | MS.gene029047:CDS |
| CTTGTGAATCAATTCCTTCA+AGG | 0.416074 | 2.4:-12131079 | MS.gene029047:CDS |
| AGGGTGGTGAAGTTGGAAAA+TGG | 0.423456 | 2.4:+12131616 | None:intergenic |
| TTCCAGTAAAATTGTACAAA+CGG | 0.430112 | 2.4:+12131311 | None:intergenic |
| CAAACTCTCTTTGCCAATCA+AGG | 0.450028 | 2.4:-12131592 | MS.gene029047:CDS |
| TGCTGAATTTGCAAAATCAA+TGG | 0.452311 | 2.4:-12131038 | MS.gene029047:CDS |
| TGTGGCTGCAATAGAGTCTC+TGG | 0.459357 | 2.4:+12131867 | None:intergenic |
| GCAAAATCAATGGAGAAAAT+GGG | 0.466453 | 2.4:-12131028 | MS.gene029047:CDS |
| GTTGGTTTGTTGAGTTCAGA+AGG | 0.478806 | 2.4:+12132016 | None:intergenic |
| CCTCTAACAGTAAGATTTGG+AGG | 0.486565 | 2.4:+12131976 | None:intergenic |
| TGGAGTCGTATCGAATTTGT+TGG | 0.490287 | 2.4:-12131662 | MS.gene029047:CDS |
| CCATATTGGAAAGTTCCAAC+AGG | 0.513974 | 2.4:-12131694 | MS.gene029047:CDS |
| GGACAAGTTAAAGTCAAGAC+AGG | 0.523583 | 2.4:-12131007 | MS.gene029047:CDS |
| TGAATGTAATAATACCAGAT+AGG | 0.531919 | 2.4:+12131545 | None:intergenic |
| CTTGTTGAAGCTGAATGCCC+TGG | 0.535811 | 2.4:-12131925 | MS.gene029047:CDS |
| AGTCAAGTTGTCAAGAGAAG+AGG | 0.538282 | 2.4:-12131151 | MS.gene029047:CDS |
| GTGAAGTTGGAAAATGGAGC+AGG | 0.550766 | 2.4:+12131622 | None:intergenic |
| ACTCCATCCCTTCTACCTGT+TGG | 0.553125 | 2.4:+12131679 | None:intergenic |
| GAAAGTTCCAACAGGTAGAA+GGG | 0.557568 | 2.4:-12131686 | MS.gene029047:CDS |
| GTTCCAACAGGTAGAAGGGA+TGG | 0.566917 | 2.4:-12131682 | MS.gene029047:CDS |
| GATTGGCAAAGAGAGTTTGG+AGG | 0.571052 | 2.4:+12131596 | None:intergenic |
| ATTGGCAAAGAGAGTTTGGA+GGG | 0.582534 | 2.4:+12131597 | None:intergenic |
| GGGGTCCATTTCGACTATTG+TGG | 0.589268 | 2.4:+12131207 | None:intergenic |
| GGCAAAGAGAGTTTGGAGGG+TGG | 0.591559 | 2.4:+12131600 | None:intergenic |
| GCATATTCACTATCAAGTGA+TGG | 0.604475 | 2.4:+12131274 | None:intergenic |
| TCAGCACAAGAAACAACACC+AGG | 0.606055 | 2.4:+12131907 | None:intergenic |
| ACAATAGTCGAAATGGACCC+CGG | 0.608410 | 2.4:-12131205 | MS.gene029047:CDS |
| CAGGGCATTCAGCTTCAACA+AGG | 0.628010 | 2.4:+12131926 | None:intergenic |
| ATGTAATAATACCAGATAGG+AGG | 0.629799 | 2.4:+12131548 | None:intergenic |
| AAAGTCAAGACAGGGTCACA+AGG | 0.649840 | 2.4:-12130998 | MS.gene029047:CDS |
| CAAATGTGTTTCGACTTCCG+GGG | 0.706421 | 2.4:+12131188 | None:intergenic |
| GACAAGTTAAAGTCAAGACA+GGG | 0.712891 | 2.4:-12131006 | MS.gene029047:CDS |
| CAGCACAAGAAACAACACCA+GGG | 0.760815 | 2.4:+12131908 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CCTGAAAAAAATTTATATCA+TGG | + | chr2.4:12131746-12131765 | None:intergenic | 20.0% |
| !! | TTACATAACCAAAAATGAAA+TGG | + | chr2.4:12131026-12131045 | None:intergenic | 20.0% |
| !!! | AACATTAAGCATTTTGATTT+AGG | - | chr2.4:12131064-12131083 | MS.gene029047:CDS | 20.0% |
| !!! | ACATTAAGCATTTTGATTTA+GGG | - | chr2.4:12131065-12131084 | MS.gene029047:CDS | 20.0% |
| !!! | CCATGATATAAATTTTTTTC+AGG | - | chr2.4:12131743-12131762 | MS.gene029047:intron | 20.0% |
| !!! | TTATACTTCCATTTCATTTT+TGG | - | chr2.4:12131015-12131034 | MS.gene029047:CDS | 20.0% |
| ! | ATTCTATCTTTAACAGACTA+AGG | - | chr2.4:12131286-12131305 | MS.gene029047:CDS | 25.0% |
| ! | TATCTATCTACTGATACATT+TGG | - | chr2.4:12131380-12131399 | MS.gene029047:intron | 25.0% |
| ! | TGAATGTAATAATACCAGAT+AGG | + | chr2.4:12131577-12131596 | None:intergenic | 25.0% |
| ! | TTCCAGTAAAATTGTACAAA+CGG | + | chr2.4:12131811-12131830 | None:intergenic | 25.0% |
| !! | TTGTACAATTTTACTGGAAA+GGG | - | chr2.4:12131812-12131831 | MS.gene029047:intron | 25.0% |
| !! | TTTGTACAATTTTACTGGAA+AGG | - | chr2.4:12131811-12131830 | MS.gene029047:intron | 25.0% |
| !! | TTTTAAATCAAGTCCTTGAT+TGG | + | chr2.4:12131543-12131562 | None:intergenic | 25.0% |
| ATAGAATTGAGTACTTACTG+TGG | + | chr2.4:12131273-12131292 | None:intergenic | 30.0% | |
| ATGTAATAATACCAGATAGG+AGG | + | chr2.4:12131574-12131593 | None:intergenic | 30.0% | |
| GCAAAATCAATGGAGAAAAT+GGG | - | chr2.4:12132091-12132110 | MS.gene029047:intron | 30.0% | |
| TCTTACACTTGAATGTCTTT+AGG | + | chr2.4:12131877-12131896 | None:intergenic | 30.0% | |
| TGCAAAATCAATGGAGAAAA+TGG | - | chr2.4:12132090-12132109 | MS.gene029047:intron | 30.0% | |
| TGCTGAATTTGCAAAATCAA+TGG | - | chr2.4:12132081-12132100 | MS.gene029047:intron | 30.0% | |
| TTAAATAAGCCAATCCAAAC+AGG | + | chr2.4:12131312-12131331 | None:intergenic | 30.0% | |
| ! | AACCGTTTGTACAATTTTAC+TGG | - | chr2.4:12131806-12131825 | MS.gene029047:intron | 30.0% |
| ! | ACTTTCATGATTGCTTTGTT+AGG | - | chr2.4:12130965-12130984 | MS.gene029047:CDS | 30.0% |
| ! | ATTTGGTGATTTGTGATTTC+AGG | - | chr2.4:12131397-12131416 | MS.gene029047:intron | 30.0% |
| ! | CTTTCATGATTGCTTTGTTA+GGG | - | chr2.4:12130966-12130985 | MS.gene029047:CDS | 30.0% |
| ! | TTTGGTGATTTGTGATTTCA+GGG | - | chr2.4:12131398-12131417 | MS.gene029047:intron | 30.0% |
| !! | CATTTTCTAGTAGTGAACTA+TGG | - | chr2.4:12131705-12131724 | MS.gene029047:intron | 30.0% |
| !!! | ATTTTGATTTAGGGATGTGA+TGG | - | chr2.4:12131074-12131093 | MS.gene029047:CDS | 30.0% |
| AAGCCTCTAACAGTAAGATT+TGG | + | chr2.4:12131149-12131168 | None:intergenic | 35.0% | |
| AGTCGAAACACATTTGATCT+TGG | - | chr2.4:12131938-12131957 | MS.gene029047:CDS | 35.0% | |
| ATCAAATGTGTTTCGACTTC+CGG | + | chr2.4:12131936-12131955 | None:intergenic | 35.0% | |
| CAATACCACAATAGTCGAAA+TGG | - | chr2.4:12131907-12131926 | MS.gene029047:CDS | 35.0% | |
| CTTGTGAATCAATTCCTTCA+AGG | - | chr2.4:12132040-12132059 | MS.gene029047:intron | 35.0% | |
| GACAAGTTAAAGTCAAGACA+GGG | - | chr2.4:12132113-12132132 | MS.gene029047:intron | 35.0% | |
| GCATATTCACTATCAAGTGA+TGG | + | chr2.4:12131848-12131867 | None:intergenic | 35.0% | |
| !!! | GAGCATTTTTTTCAGCTTGT+TGG | + | chr2.4:12131124-12131143 | None:intergenic | 35.0% |
| AAAGACTTAGTCCTCCTATC+TGG | - | chr2.4:12131560-12131579 | MS.gene029047:CDS | 40.0% | |
| ATTGGCAAAGAGAGTTTGGA+GGG | + | chr2.4:12131525-12131544 | None:intergenic | 40.0% | |
| CAAACTCTCTTTGCCAATCA+AGG | - | chr2.4:12131527-12131546 | MS.gene029047:intron | 40.0% | |
| CCATATTGGAAAGTTCCAAC+AGG | - | chr2.4:12131425-12131444 | MS.gene029047:intron | 40.0% | |
| CCTCCAAATCTTACTGTTAG+AGG | - | chr2.4:12131143-12131162 | MS.gene029047:CDS | 40.0% | |
| CCTCTAACAGTAAGATTTGG+AGG | + | chr2.4:12131146-12131165 | None:intergenic | 40.0% | |
| CCTGTTGGAACTTTCCAATA+TGG | + | chr2.4:12131428-12131447 | None:intergenic | 40.0% | |
| CTTGATTGGCAAAGAGAGTT+TGG | + | chr2.4:12131529-12131548 | None:intergenic | 40.0% | |
| GAAAGTTCCAACAGGTAGAA+GGG | - | chr2.4:12131433-12131452 | MS.gene029047:intron | 40.0% | |
| GGACAAGTTAAAGTCAAGAC+AGG | - | chr2.4:12132112-12132131 | MS.gene029047:intron | 40.0% | |
| TCAAATGTGTTTCGACTTCC+GGG | + | chr2.4:12131935-12131954 | None:intergenic | 40.0% | |
| TGGAGTCGTATCGAATTTGT+TGG | - | chr2.4:12131457-12131476 | MS.gene029047:intron | 40.0% | |
| TTAACAGACTAAGGCCTGTT+TGG | - | chr2.4:12131295-12131314 | MS.gene029047:CDS | 40.0% | |
| ! | AAGTTTCAAGTGAGCCTTGA+AGG | + | chr2.4:12132057-12132076 | None:intergenic | 40.0% |
| ! | AGTCAAGTTGTCAAGAGAAG+AGG | - | chr2.4:12131968-12131987 | MS.gene029047:CDS | 40.0% |
| !! | GACGAAAGTGCTTAATGCTA+AGG | + | chr2.4:12131607-12131626 | None:intergenic | 40.0% |
| !! | GTTGGTTTGTTGAGTTCAGA+AGG | + | chr2.4:12131106-12131125 | None:intergenic | 40.0% |
| !!! | TTTTCAGGTGCTCACACAAT+TGG | - | chr2.4:12131758-12131777 | MS.gene029047:intron | 40.0% |
| AAAGTCAAGACAGGGTCACA+AGG | - | chr2.4:12132121-12132140 | MS.gene029047:intron | 45.0% | |
| ACAATAGTCGAAATGGACCC+CGG | - | chr2.4:12131914-12131933 | MS.gene029047:CDS | 45.0% | |
| AGACTAAGGCCTGTTTGGAT+TGG | - | chr2.4:12131300-12131319 | MS.gene029047:CDS | 45.0% | |
| AGGGTGGTGAAGTTGGAAAA+TGG | + | chr2.4:12131506-12131525 | None:intergenic | 45.0% | |
| CAAATGTGTTTCGACTTCCG+GGG | + | chr2.4:12131934-12131953 | None:intergenic | 45.0% | |
| CAGCACAAGAAACAACACCA+GGG | + | chr2.4:12131214-12131233 | None:intergenic | 45.0% | |
| GATTGGCAAAGAGAGTTTGG+AGG | + | chr2.4:12131526-12131545 | None:intergenic | 45.0% | |
| GATTTCAGGGTGGTCCATAT+TGG | - | chr2.4:12131411-12131430 | MS.gene029047:intron | 45.0% | |
| GGAAAGTTCCAACAGGTAGA+AGG | - | chr2.4:12131432-12131451 | MS.gene029047:intron | 45.0% | |
| GTGAAGTTGGAAAATGGAGC+AGG | + | chr2.4:12131500-12131519 | None:intergenic | 45.0% | |
| TCAGCACAAGAAACAACACC+AGG | + | chr2.4:12131215-12131234 | None:intergenic | 45.0% | |
| ! | GGTGATTTGTGATTTCAGGG+TGG | - | chr2.4:12131401-12131420 | MS.gene029047:intron | 45.0% |
| ACTCCATCCCTTCTACCTGT+TGG | + | chr2.4:12131443-12131462 | None:intergenic | 50.0% | |
| AGTTTGGAGGGTGGTGAAGT+TGG | + | chr2.4:12131513-12131532 | None:intergenic | 50.0% | |
| CAGGGTCACAAGGTGTGATT+AGG | - | chr2.4:12132131-12132150 | MS.gene029047:intron | 50.0% | |
| CTTGTTGAAGCTGAATGCCC+TGG | - | chr2.4:12131194-12131213 | MS.gene029047:CDS | 50.0% | |
| GGGGTCCATTTCGACTATTG+TGG | + | chr2.4:12131915-12131934 | None:intergenic | 50.0% | |
| GTTCCAACAGGTAGAAGGGA+TGG | - | chr2.4:12131437-12131456 | MS.gene029047:intron | 50.0% | |
| TGTGGCTGCAATAGAGTCTC+TGG | + | chr2.4:12131255-12131274 | None:intergenic | 50.0% | |
| ! | CAGGGCATTCAGCTTCAACA+AGG | + | chr2.4:12131196-12131215 | None:intergenic | 50.0% |
| GGCAAAGAGAGTTTGGAGGG+TGG | + | chr2.4:12131522-12131541 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 12130961 | 12132180 | 12130961 | ID=MS.gene029047 |
| chr2.4 | mRNA | 12130961 | 12132180 | 12130961 | ID=MS.gene029047.t1;Parent=MS.gene029047 |
| chr2.4 | exon | 12132154 | 12132180 | 12132154 | ID=MS.gene029047.t1.exon1;Parent=MS.gene029047.t1 |
| chr2.4 | CDS | 12132154 | 12132180 | 12132154 | ID=cds.MS.gene029047.t1;Parent=MS.gene029047.t1 |
| chr2.4 | exon | 12131867 | 12132055 | 12131867 | ID=MS.gene029047.t1.exon2;Parent=MS.gene029047.t1 |
| chr2.4 | CDS | 12131867 | 12132055 | 12131867 | ID=cds.MS.gene029047.t1;Parent=MS.gene029047.t1 |
| chr2.4 | exon | 12131560 | 12131722 | 12131560 | ID=MS.gene029047.t1.exon3;Parent=MS.gene029047.t1 |
| chr2.4 | CDS | 12131560 | 12131722 | 12131560 | ID=cds.MS.gene029047.t1;Parent=MS.gene029047.t1 |
| chr2.4 | exon | 12130961 | 12131376 | 12130961 | ID=MS.gene029047.t1.exon4;Parent=MS.gene029047.t1 |
| chr2.4 | CDS | 12130961 | 12131376 | 12130961 | ID=cds.MS.gene029047.t1;Parent=MS.gene029047.t1 |
| Gene Sequence |
| Protein sequence |
