Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071108.t1 | XP_013455618.1 | 97.2 | 326 | 9 | 0 | 1 | 326 | 1 | 326 | 3.30E-182 | 647.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071108.t1 | Q9SUT2 | 60.7 | 318 | 123 | 2 | 11 | 326 | 9 | 326 | 2.2e-110 | 400.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071108.t1 | A0A072UIQ7 | 97.2 | 326 | 9 | 0 | 1 | 326 | 1 | 326 | 2.4e-182 | 647.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene071108 | 0.822296 | 2.56E-53 | -1.69E-46 |
| MS.gene050133 | MS.gene071108 | 0.803155 | 3.99E-49 | -1.69E-46 |
| MS.gene051158 | MS.gene071108 | 0.812241 | 4.68E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene071108 | 0.810184 | 1.31E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene071108 | 0.839418 | 1.60E-57 | -1.69E-46 |
| MS.gene05240 | MS.gene071108 | 0.832798 | 7.70E-56 | -1.69E-46 |
| MS.gene053406 | MS.gene071108 | 0.819918 | 9.02E-53 | -1.69E-46 |
| MS.gene054181 | MS.gene071108 | 0.805379 | 1.37E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene071108 | -0.801689 | 8.00E-49 | -1.69E-46 |
| MS.gene054277 | MS.gene071108 | 0.858141 | 1.01E-62 | -1.69E-46 |
| MS.gene054742 | MS.gene071108 | 0.849543 | 3.02E-60 | -1.69E-46 |
| MS.gene055601 | MS.gene071108 | 0.826841 | 2.17E-54 | -1.69E-46 |
| MS.gene056330 | MS.gene071108 | 0.839747 | 1.32E-57 | -1.69E-46 |
| MS.gene056690 | MS.gene071108 | 0.82939 | 5.29E-55 | -1.69E-46 |
| MS.gene056691 | MS.gene071108 | 0.825535 | 4.45E-54 | -1.69E-46 |
| MS.gene056899 | MS.gene071108 | 0.829621 | 4.65E-55 | -1.69E-46 |
| MS.gene056920 | MS.gene071108 | 0.861896 | 7.43E-64 | -1.69E-46 |
| MS.gene056922 | MS.gene071108 | 0.824587 | 7.44E-54 | -1.69E-46 |
| MS.gene056923 | MS.gene071108 | 0.850474 | 1.66E-60 | -1.69E-46 |
| MS.gene056924 | MS.gene071108 | 0.84779 | 9.25E-60 | -1.69E-46 |
| MS.gene057544 | MS.gene071108 | 0.804352 | 2.25E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene071108 | 0.820775 | 5.74E-53 | -1.69E-46 |
| MS.gene059043 | MS.gene071108 | 0.800839 | 1.19E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene071108 | 0.819629 | 1.05E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene071108 | -0.804151 | 2.48E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene071108 | 0.813654 | 2.29E-51 | -1.69E-46 |
| MS.gene060087 | MS.gene071108 | 0.826729 | 2.31E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene038655 | MS.gene071108 | PPI |
| MS.gene009198 | MS.gene071108 | PPI |
| MS.gene35853 | MS.gene071108 | PPI |
| MS.gene35931 | MS.gene071108 | PPI |
| MS.gene32715 | MS.gene071108 | PPI |
| MS.gene35795 | MS.gene071108 | PPI |
| MS.gene71470 | MS.gene071108 | PPI |
| MS.gene80170 | MS.gene071108 | PPI |
| MS.gene029047 | MS.gene071108 | PPI |
| MS.gene014924 | MS.gene071108 | PPI |
| MS.gene69473 | MS.gene071108 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071108.t1 | MTR_4g046713 | 97.239 | 326 | 9 | 0 | 1 | 326 | 1 | 326 | 0.0 | 664 |
| MS.gene071108.t1 | MTR_2g088770 | 71.037 | 328 | 90 | 4 | 1 | 326 | 1 | 325 | 7.33e-176 | 490 |
| MS.gene071108.t1 | MTR_7g107520 | 53.067 | 326 | 147 | 4 | 1 | 326 | 1 | 320 | 1.00e-120 | 350 |
| MS.gene071108.t1 | MTR_3g092990 | 46.082 | 319 | 171 | 1 | 9 | 326 | 8 | 326 | 4.39e-98 | 293 |
| MS.gene071108.t1 | MTR_2g029820 | 44.109 | 331 | 177 | 4 | 3 | 326 | 1 | 330 | 7.22e-93 | 280 |
| MS.gene071108.t1 | MTR_5g017860 | 42.813 | 327 | 185 | 2 | 1 | 326 | 1 | 326 | 1.03e-92 | 279 |
| MS.gene071108.t1 | MTR_5g017850 | 41.896 | 327 | 188 | 2 | 1 | 326 | 1 | 326 | 6.53e-92 | 277 |
| MS.gene071108.t1 | MTR_5g022870 | 47.170 | 318 | 156 | 6 | 12 | 326 | 8 | 316 | 1.50e-90 | 273 |
| MS.gene071108.t1 | MTR_2g029815 | 43.505 | 331 | 179 | 4 | 3 | 326 | 1 | 330 | 2.44e-90 | 274 |
| MS.gene071108.t1 | MTR_5g021060 | 48.013 | 302 | 154 | 3 | 27 | 326 | 30 | 330 | 5.18e-90 | 272 |
| MS.gene071108.t1 | MTR_2g029800 | 43.614 | 321 | 173 | 4 | 13 | 326 | 11 | 330 | 8.57e-90 | 272 |
| MS.gene071108.t1 | MTR_1g101830 | 43.425 | 327 | 174 | 6 | 3 | 326 | 4 | 322 | 3.42e-89 | 270 |
| MS.gene071108.t1 | MTR_2g040000 | 46.580 | 307 | 155 | 5 | 26 | 326 | 28 | 331 | 1.33e-88 | 269 |
| MS.gene071108.t1 | MTR_2g029850 | 44.237 | 321 | 171 | 5 | 13 | 326 | 11 | 330 | 1.79e-88 | 269 |
| MS.gene071108.t1 | MTR_2g008710 | 44.954 | 327 | 168 | 5 | 7 | 326 | 4 | 325 | 2.46e-88 | 268 |
| MS.gene071108.t1 | MTR_8g075100 | 45.246 | 305 | 161 | 4 | 22 | 326 | 21 | 319 | 7.02e-88 | 266 |
| MS.gene071108.t1 | MTR_1g054205 | 41.667 | 324 | 184 | 4 | 7 | 326 | 4 | 326 | 1.09e-87 | 266 |
| MS.gene071108.t1 | MTR_2g028980 | 42.598 | 331 | 182 | 4 | 3 | 326 | 1 | 330 | 3.96e-87 | 266 |
| MS.gene071108.t1 | MTR_7g093370 | 41.463 | 328 | 187 | 4 | 3 | 326 | 45 | 371 | 4.63e-87 | 266 |
| MS.gene071108.t1 | MTR_0155s0040 | 44.625 | 307 | 159 | 4 | 20 | 326 | 20 | 315 | 2.83e-86 | 262 |
| MS.gene071108.t1 | MTR_2g029740 | 43.293 | 328 | 175 | 5 | 9 | 326 | 4 | 330 | 5.33e-86 | 263 |
| MS.gene071108.t1 | MTR_2g029830 | 44.805 | 308 | 166 | 3 | 22 | 326 | 23 | 329 | 5.69e-86 | 263 |
| MS.gene071108.t1 | MTR_3g092990 | 43.887 | 319 | 167 | 2 | 9 | 326 | 8 | 315 | 1.18e-85 | 261 |
| MS.gene071108.t1 | MTR_8g076820 | 45.695 | 302 | 161 | 3 | 27 | 326 | 30 | 330 | 4.55e-85 | 259 |
| MS.gene071108.t1 | MTR_2g029560 | 42.508 | 327 | 183 | 5 | 3 | 326 | 1 | 325 | 6.52e-85 | 259 |
| MS.gene071108.t1 | MTR_3g094650 | 40.895 | 313 | 174 | 4 | 13 | 322 | 14 | 318 | 7.60e-85 | 259 |
| MS.gene071108.t1 | MTR_1g077000 | 41.562 | 320 | 176 | 3 | 7 | 326 | 19 | 327 | 9.48e-85 | 259 |
| MS.gene071108.t1 | MTR_2g029750 | 42.900 | 331 | 181 | 4 | 3 | 326 | 1 | 330 | 3.86e-84 | 258 |
| MS.gene071108.t1 | MTR_4g125940 | 42.154 | 325 | 180 | 4 | 7 | 326 | 8 | 329 | 5.29e-84 | 257 |
| MS.gene071108.t1 | MTR_1g038680 | 45.724 | 304 | 159 | 5 | 28 | 326 | 30 | 332 | 1.65e-83 | 256 |
| MS.gene071108.t1 | MTR_4g114210 | 42.236 | 322 | 176 | 4 | 10 | 326 | 4 | 320 | 2.06e-83 | 255 |
| MS.gene071108.t1 | MTR_3g072190 | 43.168 | 322 | 172 | 4 | 8 | 326 | 5 | 318 | 8.38e-83 | 253 |
| MS.gene071108.t1 | MTR_2g029860 | 42.154 | 325 | 184 | 3 | 5 | 326 | 7 | 330 | 3.40e-81 | 250 |
| MS.gene071108.t1 | MTR_2g029730 | 41.590 | 327 | 187 | 3 | 3 | 326 | 1 | 326 | 9.59e-81 | 249 |
| MS.gene071108.t1 | MTR_3g466200 | 41.617 | 334 | 173 | 8 | 1 | 326 | 1 | 320 | 2.64e-80 | 247 |
| MS.gene071108.t1 | MTR_1g025980 | 41.325 | 317 | 177 | 4 | 11 | 325 | 8 | 317 | 4.46e-80 | 246 |
| MS.gene071108.t1 | MTR_7g086820 | 41.118 | 304 | 168 | 4 | 25 | 326 | 18 | 312 | 8.78e-80 | 246 |
| MS.gene071108.t1 | MTR_6g027440 | 40.187 | 321 | 180 | 5 | 10 | 326 | 2 | 314 | 1.67e-79 | 245 |
| MS.gene071108.t1 | MTR_2g084080 | 39.628 | 323 | 184 | 4 | 7 | 326 | 3 | 317 | 4.21e-79 | 244 |
| MS.gene071108.t1 | MTR_8g062780 | 39.432 | 317 | 187 | 4 | 13 | 326 | 10 | 324 | 5.22e-79 | 244 |
| MS.gene071108.t1 | MTR_2g084110 | 39.144 | 327 | 188 | 4 | 1 | 326 | 1 | 317 | 6.42e-79 | 243 |
| MS.gene071108.t1 | MTR_7g072510 | 38.679 | 318 | 186 | 3 | 10 | 326 | 3 | 312 | 6.48e-79 | 243 |
| MS.gene071108.t1 | MTR_4g029170 | 40.122 | 329 | 184 | 6 | 3 | 326 | 1 | 321 | 1.57e-78 | 243 |
| MS.gene071108.t1 | MTR_5g074970 | 40.312 | 320 | 178 | 5 | 12 | 326 | 15 | 326 | 1.81e-78 | 243 |
| MS.gene071108.t1 | MTR_2g029910 | 42.236 | 322 | 177 | 6 | 13 | 326 | 12 | 332 | 2.27e-78 | 243 |
| MS.gene071108.t1 | MTR_1g086320 | 40.498 | 321 | 185 | 4 | 11 | 326 | 14 | 333 | 2.36e-78 | 243 |
| MS.gene071108.t1 | MTR_7g029030 | 41.456 | 316 | 177 | 4 | 13 | 326 | 11 | 320 | 9.37e-78 | 241 |
| MS.gene071108.t1 | MTR_4g083710 | 39.571 | 326 | 182 | 6 | 9 | 326 | 6 | 324 | 1.12e-77 | 240 |
| MS.gene071108.t1 | MTR_2g437770 | 44.884 | 303 | 153 | 7 | 27 | 326 | 50 | 341 | 3.19e-77 | 240 |
| MS.gene071108.t1 | MTR_7g072480 | 40.252 | 318 | 181 | 3 | 10 | 326 | 7 | 316 | 4.12e-77 | 239 |
| MS.gene071108.t1 | MTR_1g086490 | 38.415 | 328 | 189 | 4 | 11 | 326 | 14 | 340 | 4.52e-77 | 239 |
| MS.gene071108.t1 | MTR_4g125940 | 45.091 | 275 | 143 | 4 | 57 | 326 | 3 | 274 | 6.96e-77 | 237 |
| MS.gene071108.t1 | MTR_4g087965 | 42.105 | 304 | 169 | 5 | 26 | 323 | 41 | 343 | 1.82e-76 | 238 |
| MS.gene071108.t1 | MTR_2g084020 | 41.368 | 307 | 170 | 4 | 22 | 326 | 20 | 318 | 6.08e-76 | 236 |
| MS.gene071108.t1 | MTR_3g094670 | 40.635 | 315 | 176 | 4 | 11 | 322 | 12 | 318 | 7.24e-76 | 236 |
| MS.gene071108.t1 | MTR_7g086870 | 39.735 | 302 | 172 | 4 | 25 | 326 | 20 | 311 | 1.40e-75 | 234 |
| MS.gene071108.t1 | MTR_1g115900 | 40.000 | 320 | 177 | 7 | 11 | 326 | 13 | 321 | 2.78e-75 | 234 |
| MS.gene071108.t1 | MTR_5g016010 | 40.752 | 319 | 184 | 2 | 11 | 325 | 11 | 328 | 3.11e-75 | 234 |
| MS.gene071108.t1 | MTR_5g014100 | 43.709 | 302 | 164 | 4 | 31 | 326 | 30 | 331 | 3.50e-75 | 234 |
| MS.gene071108.t1 | MTR_4g122640 | 41.368 | 307 | 173 | 5 | 23 | 326 | 34 | 336 | 6.02e-75 | 234 |
| MS.gene071108.t1 | MTR_4g030890 | 40.260 | 308 | 179 | 4 | 20 | 326 | 93 | 396 | 7.55e-75 | 236 |
| MS.gene071108.t1 | MTR_5g083860 | 40.187 | 321 | 179 | 4 | 12 | 326 | 12 | 325 | 7.77e-75 | 233 |
| MS.gene071108.t1 | MTR_4g029200 | 37.126 | 334 | 183 | 4 | 12 | 326 | 13 | 338 | 9.02e-75 | 233 |
| MS.gene071108.t1 | MTR_2g084010 | 41.368 | 307 | 170 | 4 | 22 | 326 | 20 | 318 | 2.18e-74 | 232 |
| MS.gene071108.t1 | MTR_4g029190 | 37.910 | 335 | 181 | 5 | 12 | 326 | 13 | 340 | 2.44e-74 | 233 |
| MS.gene071108.t1 | MTR_2g084090 | 38.838 | 327 | 190 | 3 | 1 | 326 | 1 | 318 | 7.82e-74 | 230 |
| MS.gene071108.t1 | MTR_5g049280 | 39.423 | 312 | 180 | 7 | 22 | 326 | 28 | 337 | 9.31e-74 | 231 |
| MS.gene071108.t1 | MTR_4g029180 | 40.468 | 299 | 167 | 5 | 31 | 326 | 31 | 321 | 1.04e-73 | 230 |
| MS.gene071108.t1 | MTR_5g074740 | 40.000 | 330 | 183 | 8 | 3 | 326 | 1 | 321 | 3.25e-73 | 229 |
| MS.gene071108.t1 | MTR_4g074995 | 39.688 | 320 | 168 | 6 | 12 | 326 | 9 | 308 | 4.56e-73 | 228 |
| MS.gene071108.t1 | MTR_4g031140 | 39.016 | 305 | 181 | 4 | 23 | 326 | 24 | 324 | 5.00e-73 | 229 |
| MS.gene071108.t1 | MTR_5g074760 | 39.697 | 330 | 184 | 8 | 3 | 326 | 1 | 321 | 6.93e-73 | 228 |
| MS.gene071108.t1 | MTR_1g022970 | 41.914 | 303 | 172 | 3 | 27 | 326 | 46 | 347 | 1.01e-72 | 228 |
| MS.gene071108.t1 | MTR_4g133800 | 41.611 | 298 | 165 | 5 | 30 | 326 | 44 | 333 | 4.79e-72 | 226 |
| MS.gene071108.t1 | MTR_3g094630 | 39.812 | 319 | 181 | 4 | 11 | 326 | 12 | 322 | 4.81e-72 | 226 |
| MS.gene071108.t1 | MTR_1g090760 | 37.152 | 323 | 197 | 5 | 9 | 326 | 9 | 330 | 9.28e-72 | 226 |
| MS.gene071108.t1 | MTR_1g009750 | 41.212 | 330 | 186 | 5 | 3 | 326 | 1 | 328 | 9.34e-72 | 225 |
| MS.gene071108.t1 | MTR_4g095450 | 40.252 | 318 | 178 | 4 | 12 | 325 | 14 | 323 | 1.06e-71 | 225 |
| MS.gene071108.t1 | MTR_2g084000 | 37.695 | 321 | 190 | 4 | 8 | 326 | 7 | 319 | 4.21e-71 | 223 |
| MS.gene071108.t1 | MTR_2g008160 | 40.705 | 312 | 175 | 5 | 20 | 326 | 17 | 323 | 1.34e-70 | 222 |
| MS.gene071108.t1 | MTR_4g127670 | 40.264 | 303 | 177 | 3 | 26 | 326 | 23 | 323 | 5.15e-70 | 221 |
| MS.gene071108.t1 | MTR_2g008730 | 40.061 | 327 | 160 | 6 | 7 | 326 | 4 | 301 | 8.41e-69 | 217 |
| MS.gene071108.t1 | MTR_2g029830 | 44.961 | 258 | 138 | 3 | 72 | 326 | 5 | 261 | 1.27e-68 | 216 |
| MS.gene071108.t1 | MTR_7g026990 | 37.117 | 326 | 195 | 3 | 2 | 326 | 6 | 322 | 1.37e-68 | 217 |
| MS.gene071108.t1 | MTR_3g467600 | 40.426 | 329 | 177 | 9 | 6 | 326 | 7 | 324 | 2.97e-68 | 216 |
| MS.gene071108.t1 | MTR_4g074990 | 38.125 | 320 | 170 | 6 | 12 | 326 | 9 | 305 | 1.99e-67 | 214 |
| MS.gene071108.t1 | MTR_5g074710 | 37.576 | 330 | 191 | 8 | 3 | 326 | 1 | 321 | 2.21e-67 | 214 |
| MS.gene071108.t1 | MTR_3g466180 | 37.975 | 316 | 187 | 3 | 12 | 326 | 16 | 323 | 3.23e-67 | 214 |
| MS.gene071108.t1 | MTR_3g072190 | 44.358 | 257 | 134 | 3 | 71 | 326 | 3 | 251 | 1.23e-66 | 210 |
| MS.gene071108.t1 | MTR_6g043460 | 35.045 | 331 | 197 | 6 | 1 | 322 | 3 | 324 | 9.11e-66 | 211 |
| MS.gene071108.t1 | MTR_3g105790 | 38.344 | 326 | 179 | 5 | 11 | 326 | 9 | 322 | 1.64e-65 | 209 |
| MS.gene071108.t1 | MTR_2g099175 | 38.037 | 326 | 189 | 6 | 9 | 326 | 15 | 335 | 2.93e-65 | 209 |
| MS.gene071108.t1 | MTR_1g009750 | 38.957 | 326 | 182 | 6 | 3 | 326 | 1 | 311 | 5.36e-63 | 202 |
| MS.gene071108.t1 | MTR_0286s0010 | 36.562 | 320 | 194 | 6 | 12 | 326 | 19 | 334 | 1.94e-62 | 202 |
| MS.gene071108.t1 | MTR_6g008075 | 36.562 | 320 | 194 | 6 | 12 | 326 | 19 | 334 | 1.94e-62 | 202 |
| MS.gene071108.t1 | MTR_5g074860 | 36.615 | 325 | 187 | 8 | 6 | 322 | 8 | 321 | 5.53e-62 | 200 |
| MS.gene071108.t1 | MTR_2g067440 | 35.562 | 329 | 180 | 5 | 25 | 323 | 58 | 384 | 1.22e-61 | 201 |
| MS.gene071108.t1 | MTR_6g043240 | 36.527 | 334 | 186 | 7 | 7 | 326 | 10 | 331 | 4.22e-61 | 199 |
| MS.gene071108.t1 | MTR_4g132110 | 35.786 | 299 | 185 | 2 | 30 | 326 | 35 | 328 | 9.62e-61 | 197 |
| MS.gene071108.t1 | MTR_6g043280 | 35.599 | 309 | 183 | 7 | 24 | 326 | 34 | 332 | 1.01e-60 | 197 |
| MS.gene071108.t1 | MTR_2g078610 | 35.347 | 331 | 181 | 6 | 25 | 323 | 74 | 403 | 1.57e-59 | 196 |
| MS.gene071108.t1 | MTR_2g077990 | 37.160 | 331 | 175 | 7 | 25 | 323 | 74 | 403 | 1.78e-59 | 196 |
| MS.gene071108.t1 | MTR_4g074980 | 36.875 | 320 | 163 | 6 | 11 | 326 | 10 | 294 | 2.49e-59 | 192 |
| MS.gene071108.t1 | MTR_4g074980 | 42.460 | 252 | 133 | 5 | 11 | 258 | 10 | 253 | 7.49e-59 | 190 |
| MS.gene071108.t1 | MTR_4g132110 | 35.197 | 304 | 185 | 3 | 30 | 326 | 35 | 333 | 2.25e-58 | 191 |
| MS.gene071108.t1 | MTR_1g066710 | 34.754 | 305 | 190 | 3 | 25 | 326 | 25 | 323 | 1.33e-57 | 189 |
| MS.gene071108.t1 | MTR_2g008160 | 36.538 | 312 | 153 | 5 | 20 | 326 | 17 | 288 | 2.34e-56 | 184 |
| MS.gene071108.t1 | MTR_1g066380 | 34.628 | 309 | 185 | 6 | 25 | 326 | 25 | 323 | 5.26e-56 | 185 |
| MS.gene071108.t1 | MTR_1g066640 | 33.770 | 305 | 193 | 3 | 25 | 326 | 25 | 323 | 1.34e-55 | 184 |
| MS.gene071108.t1 | MTR_1g066680 | 34.426 | 305 | 190 | 4 | 25 | 326 | 25 | 322 | 2.11e-55 | 183 |
| MS.gene071108.t1 | MTR_2g078280 | 36.478 | 318 | 169 | 5 | 25 | 310 | 74 | 390 | 2.54e-55 | 185 |
| MS.gene071108.t1 | MTR_4g132490 | 33.333 | 321 | 203 | 4 | 11 | 326 | 13 | 327 | 6.58e-55 | 182 |
| MS.gene071108.t1 | MTR_2g067450 | 36.928 | 306 | 183 | 6 | 25 | 325 | 9 | 309 | 1.14e-54 | 181 |
| MS.gene071108.t1 | MTR_5g033470 | 35.256 | 312 | 195 | 5 | 21 | 326 | 67 | 377 | 1.39e-54 | 182 |
| MS.gene071108.t1 | MTR_0147s0010 | 34.069 | 317 | 175 | 5 | 27 | 323 | 77 | 379 | 7.58e-53 | 178 |
| MS.gene071108.t1 | MTR_2g008160 | 46.111 | 180 | 94 | 2 | 20 | 199 | 17 | 193 | 1.41e-47 | 159 |
| MS.gene071108.t1 | MTR_3g105790 | 37.549 | 253 | 139 | 4 | 84 | 326 | 3 | 246 | 3.32e-45 | 154 |
| MS.gene071108.t1 | MTR_5g074860 | 31.579 | 323 | 167 | 7 | 6 | 322 | 8 | 282 | 1.52e-41 | 146 |
| MS.gene071108.t1 | MTR_1g066380 | 32.700 | 263 | 160 | 6 | 71 | 326 | 3 | 255 | 4.14e-41 | 144 |
| MS.gene071108.t1 | MTR_5g074700 | 36.481 | 233 | 124 | 8 | 97 | 326 | 3 | 214 | 3.03e-36 | 130 |
| MS.gene071108.t1 | MTR_2g029880 | 38.776 | 196 | 107 | 5 | 133 | 326 | 4 | 188 | 5.26e-35 | 127 |
| MS.gene071108.t1 | MTR_7g072490 | 34.274 | 248 | 100 | 5 | 73 | 319 | 2 | 187 | 4.76e-32 | 119 |
| MS.gene071108.t1 | MTR_3g072210 | 36.788 | 193 | 112 | 4 | 136 | 326 | 54 | 238 | 5.73e-32 | 119 |
| MS.gene071108.t1 | MTR_3g072260 | 45.714 | 140 | 71 | 3 | 8 | 144 | 5 | 142 | 5.99e-30 | 111 |
| MS.gene071108.t1 | MTR_1g089005 | 45.669 | 127 | 56 | 2 | 12 | 132 | 7 | 126 | 4.04e-29 | 109 |
| MS.gene071108.t1 | MTR_7g086790 | 32.995 | 197 | 106 | 5 | 74 | 268 | 17 | 189 | 5.39e-24 | 97.4 |
| MS.gene071108.t1 | MTR_6g048160 | 61.765 | 68 | 23 | 1 | 66 | 133 | 22 | 86 | 1.65e-22 | 90.1 |
| MS.gene071108.t1 | MTR_2g077980 | 27.915 | 283 | 164 | 8 | 79 | 323 | 1 | 281 | 2.29e-22 | 95.1 |
| MS.gene071108.t1 | MTR_4g114220 | 44.330 | 97 | 41 | 3 | 38 | 134 | 18 | 101 | 1.12e-20 | 87.0 |
| MS.gene071108.t1 | MTR_7g086810 | 42.149 | 121 | 45 | 1 | 25 | 145 | 4 | 99 | 1.43e-20 | 89.4 |
| MS.gene071108.t1 | MTR_5g058120 | 34.969 | 163 | 92 | 4 | 161 | 322 | 6 | 155 | 1.98e-20 | 89.4 |
| MS.gene071108.t1 | MTR_2g078560 | 24.503 | 302 | 179 | 6 | 71 | 325 | 20 | 319 | 1.09e-18 | 85.5 |
| MS.gene071108.t1 | MTR_7g107500 | 43.902 | 82 | 45 | 1 | 245 | 326 | 17 | 97 | 1.57e-17 | 77.0 |
| MS.gene071108.t1 | MTR_4g012865 | 50.000 | 68 | 34 | 0 | 27 | 94 | 77 | 144 | 1.25e-15 | 73.6 |
| MS.gene071108.t1 | MTR_6g071110 | 45.745 | 94 | 39 | 3 | 93 | 186 | 80 | 161 | 6.27e-15 | 71.6 |
| MS.gene071108.t1 | MTR_7g086785 | 35.897 | 117 | 68 | 2 | 72 | 181 | 3 | 119 | 1.09e-14 | 70.5 |
| MS.gene071108.t1 | MTR_2g029930 | 33.333 | 108 | 42 | 4 | 13 | 104 | 1 | 94 | 4.58e-12 | 62.4 |
| MS.gene071108.t1 | MTR_4g031040 | 31.746 | 126 | 68 | 3 | 134 | 259 | 23 | 130 | 2.12e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071108.t1 | AT4G11290 | 61.059 | 321 | 117 | 3 | 11 | 326 | 9 | 326 | 5.79e-145 | 412 |
| MS.gene071108.t1 | AT1G05260 | 62.179 | 312 | 116 | 2 | 16 | 326 | 15 | 325 | 7.36e-145 | 411 |
| MS.gene071108.t1 | AT3G21770 | 59.223 | 309 | 124 | 2 | 16 | 323 | 18 | 325 | 8.99e-135 | 386 |
| MS.gene071108.t1 | AT5G15180 | 53.750 | 320 | 143 | 5 | 9 | 326 | 13 | 329 | 7.32e-120 | 348 |
| MS.gene071108.t1 | AT3G01190 | 52.960 | 321 | 142 | 6 | 10 | 326 | 6 | 321 | 3.20e-115 | 336 |
| MS.gene071108.t1 | AT1G05240 | 49.669 | 302 | 140 | 5 | 31 | 326 | 30 | 325 | 3.24e-103 | 306 |
| MS.gene071108.t1 | AT1G05250 | 49.669 | 302 | 140 | 5 | 31 | 326 | 30 | 325 | 3.24e-103 | 306 |
| MS.gene071108.t1 | AT2G18150 | 44.481 | 308 | 168 | 3 | 21 | 326 | 30 | 336 | 1.34e-90 | 274 |
| MS.gene071108.t1 | AT2G39040 | 46.965 | 313 | 157 | 7 | 21 | 326 | 40 | 350 | 2.16e-87 | 266 |
| MS.gene071108.t1 | AT5G51890 | 42.006 | 319 | 174 | 5 | 12 | 326 | 11 | 322 | 7.01e-87 | 264 |
| MS.gene071108.t1 | AT5G19890 | 43.465 | 329 | 172 | 7 | 3 | 326 | 8 | 327 | 1.35e-86 | 263 |
| MS.gene071108.t1 | AT4G36430 | 42.453 | 318 | 177 | 4 | 14 | 326 | 14 | 330 | 1.58e-86 | 263 |
| MS.gene071108.t1 | AT2G18140 | 43.385 | 325 | 180 | 4 | 5 | 326 | 12 | 335 | 3.11e-86 | 263 |
| MS.gene071108.t1 | AT3G03670 | 41.195 | 318 | 185 | 2 | 9 | 326 | 6 | 321 | 1.34e-85 | 261 |
| MS.gene071108.t1 | AT2G41480 | 42.945 | 326 | 174 | 6 | 8 | 326 | 8 | 328 | 1.42e-85 | 261 |
| MS.gene071108.t1 | AT4G33420 | 43.218 | 317 | 167 | 5 | 12 | 326 | 20 | 325 | 1.81e-85 | 260 |
| MS.gene071108.t1 | AT5G17820 | 42.357 | 314 | 171 | 4 | 13 | 326 | 10 | 313 | 2.72e-85 | 259 |
| MS.gene071108.t1 | AT3G32980 | 42.587 | 317 | 176 | 4 | 15 | 326 | 19 | 334 | 3.22e-85 | 261 |
| MS.gene071108.t1 | AT5G14130 | 41.509 | 318 | 179 | 5 | 12 | 326 | 17 | 330 | 8.97e-85 | 259 |
| MS.gene071108.t1 | AT5G42180 | 42.444 | 311 | 174 | 3 | 12 | 322 | 8 | 313 | 1.17e-84 | 258 |
| MS.gene071108.t1 | AT5G17820 | 42.154 | 325 | 177 | 5 | 2 | 326 | 53 | 366 | 1.20e-84 | 260 |
| MS.gene071108.t1 | AT4G33420 | 43.218 | 317 | 167 | 5 | 12 | 326 | 67 | 372 | 1.39e-84 | 260 |
| MS.gene071108.t1 | AT5G14130 | 41.509 | 318 | 179 | 5 | 12 | 326 | 58 | 371 | 3.56e-84 | 259 |
| MS.gene071108.t1 | AT5G06720 | 40.566 | 318 | 185 | 3 | 12 | 326 | 17 | 333 | 5.27e-84 | 257 |
| MS.gene071108.t1 | AT3G50990 | 45.928 | 307 | 163 | 3 | 22 | 326 | 36 | 341 | 7.17e-84 | 257 |
| MS.gene071108.t1 | AT2G38390 | 40.000 | 320 | 187 | 4 | 11 | 326 | 15 | 333 | 8.00e-84 | 257 |
| MS.gene071108.t1 | AT5G39580 | 42.378 | 328 | 176 | 7 | 3 | 326 | 1 | 319 | 1.34e-83 | 255 |
| MS.gene071108.t1 | AT4G08770 | 42.857 | 315 | 168 | 6 | 20 | 326 | 17 | 327 | 2.40e-83 | 256 |
| MS.gene071108.t1 | AT5G66390 | 43.492 | 315 | 175 | 3 | 14 | 326 | 20 | 333 | 5.65e-83 | 254 |
| MS.gene071108.t1 | AT2G38380 | 40.625 | 320 | 185 | 4 | 11 | 326 | 15 | 333 | 6.62e-83 | 254 |
| MS.gene071108.t1 | AT5G64120 | 40.719 | 334 | 182 | 6 | 3 | 326 | 1 | 328 | 1.81e-82 | 253 |
| MS.gene071108.t1 | AT3G49110 | 41.846 | 325 | 181 | 5 | 9 | 326 | 13 | 336 | 2.62e-82 | 253 |
| MS.gene071108.t1 | AT3G49120 | 41.640 | 317 | 179 | 4 | 15 | 326 | 20 | 335 | 6.58e-82 | 252 |
| MS.gene071108.t1 | AT5G06730 | 39.308 | 318 | 189 | 4 | 12 | 326 | 18 | 334 | 3.63e-81 | 251 |
| MS.gene071108.t1 | AT2G24800 | 41.311 | 305 | 172 | 3 | 25 | 326 | 29 | 329 | 2.27e-79 | 245 |
| MS.gene071108.t1 | AT5G64100 | 43.333 | 300 | 159 | 5 | 30 | 326 | 40 | 331 | 4.48e-79 | 244 |
| MS.gene071108.t1 | AT1G14550 | 41.121 | 321 | 179 | 5 | 9 | 326 | 8 | 321 | 7.61e-79 | 243 |
| MS.gene071108.t1 | AT4G37530 | 41.801 | 311 | 176 | 2 | 20 | 326 | 20 | 329 | 3.45e-78 | 242 |
| MS.gene071108.t1 | AT1G44970 | 42.765 | 311 | 174 | 3 | 19 | 326 | 37 | 346 | 5.87e-78 | 242 |
| MS.gene071108.t1 | AT2G18980 | 42.857 | 329 | 177 | 5 | 3 | 326 | 1 | 323 | 7.77e-78 | 241 |
| MS.gene071108.t1 | AT4G08780 | 41.987 | 312 | 169 | 6 | 23 | 326 | 20 | 327 | 9.24e-78 | 241 |
| MS.gene071108.t1 | AT1G71695 | 42.574 | 303 | 164 | 5 | 27 | 326 | 44 | 339 | 6.74e-77 | 239 |
| MS.gene071108.t1 | AT1G49570 | 41.118 | 304 | 174 | 4 | 25 | 324 | 46 | 348 | 6.90e-76 | 237 |
| MS.gene071108.t1 | AT5G05340 | 40.984 | 305 | 171 | 3 | 24 | 326 | 27 | 324 | 9.58e-76 | 236 |
| MS.gene071108.t1 | AT1G14540 | 39.062 | 320 | 185 | 5 | 9 | 326 | 4 | 315 | 7.00e-75 | 233 |
| MS.gene071108.t1 | AT4G31760 | 39.623 | 318 | 183 | 5 | 12 | 326 | 15 | 326 | 7.52e-75 | 233 |
| MS.gene071108.t1 | AT4G16270 | 42.000 | 300 | 167 | 6 | 30 | 326 | 53 | 348 | 2.70e-74 | 233 |
| MS.gene071108.t1 | AT5G19880 | 38.788 | 330 | 195 | 5 | 3 | 326 | 1 | 329 | 4.64e-74 | 231 |
| MS.gene071108.t1 | AT5G58400 | 41.401 | 314 | 175 | 5 | 12 | 322 | 14 | 321 | 5.23e-74 | 231 |
| MS.gene071108.t1 | AT2G22420 | 38.170 | 317 | 190 | 5 | 11 | 326 | 8 | 319 | 7.55e-74 | 231 |
| MS.gene071108.t1 | AT1G77100 | 41.987 | 312 | 167 | 6 | 20 | 326 | 17 | 319 | 8.53e-74 | 230 |
| MS.gene071108.t1 | AT4G25980 | 39.564 | 321 | 184 | 5 | 12 | 326 | 10 | 326 | 8.57e-74 | 231 |
| MS.gene071108.t1 | AT4G37520 | 40.523 | 306 | 177 | 2 | 25 | 326 | 25 | 329 | 1.93e-73 | 230 |
| MS.gene071108.t1 | AT4G26010 | 39.241 | 316 | 176 | 6 | 12 | 326 | 9 | 309 | 2.31e-73 | 229 |
| MS.gene071108.t1 | AT4G26010 | 39.241 | 316 | 176 | 6 | 12 | 326 | 37 | 337 | 5.55e-73 | 229 |
| MS.gene071108.t1 | AT3G49960 | 41.049 | 324 | 182 | 4 | 11 | 326 | 7 | 329 | 9.67e-73 | 228 |
| MS.gene071108.t1 | AT2G35380 | 40.000 | 330 | 176 | 5 | 11 | 326 | 14 | 335 | 4.49e-72 | 226 |
| MS.gene071108.t1 | AT5G64110 | 39.667 | 300 | 172 | 4 | 30 | 326 | 37 | 330 | 6.32e-72 | 226 |
| MS.gene071108.t1 | AT5G67400 | 40.777 | 309 | 178 | 2 | 22 | 326 | 22 | 329 | 9.87e-72 | 225 |
| MS.gene071108.t1 | AT4G37520 | 40.523 | 306 | 174 | 3 | 25 | 326 | 25 | 326 | 2.93e-71 | 224 |
| MS.gene071108.t1 | AT4G17690 | 38.141 | 312 | 184 | 4 | 18 | 326 | 17 | 322 | 1.56e-70 | 222 |
| MS.gene071108.t1 | AT4G33870 | 36.119 | 335 | 178 | 3 | 24 | 323 | 65 | 398 | 2.68e-70 | 224 |
| MS.gene071108.t1 | AT1G68850 | 38.411 | 302 | 180 | 4 | 31 | 326 | 34 | 335 | 1.37e-69 | 220 |
| MS.gene071108.t1 | AT2G34060 | 39.474 | 304 | 179 | 3 | 24 | 322 | 39 | 342 | 3.33e-69 | 219 |
| MS.gene071108.t1 | AT1G34510 | 37.975 | 316 | 180 | 6 | 12 | 326 | 9 | 309 | 5.12e-69 | 218 |
| MS.gene071108.t1 | AT5G22410 | 40.063 | 317 | 178 | 7 | 11 | 322 | 12 | 321 | 6.29e-69 | 218 |
| MS.gene071108.t1 | AT5G58390 | 38.629 | 321 | 180 | 6 | 9 | 322 | 2 | 312 | 1.63e-68 | 217 |
| MS.gene071108.t1 | AT4G30170 | 39.869 | 306 | 175 | 3 | 25 | 326 | 25 | 325 | 1.71e-68 | 217 |
| MS.gene071108.t1 | AT4G37530 | 43.346 | 263 | 144 | 2 | 20 | 278 | 20 | 281 | 1.51e-67 | 213 |
| MS.gene071108.t1 | AT1G30870 | 41.472 | 299 | 164 | 6 | 31 | 326 | 55 | 345 | 5.92e-67 | 214 |
| MS.gene071108.t1 | AT5G47000 | 37.538 | 325 | 186 | 7 | 11 | 326 | 14 | 330 | 3.09e-66 | 211 |
| MS.gene071108.t1 | AT4G21960 | 35.435 | 333 | 200 | 6 | 3 | 326 | 1 | 327 | 1.16e-65 | 210 |
| MS.gene071108.t1 | AT5G40150 | 36.808 | 307 | 187 | 2 | 22 | 326 | 27 | 328 | 9.20e-65 | 207 |
| MS.gene071108.t1 | AT1G24110 | 35.759 | 316 | 193 | 4 | 14 | 322 | 6 | 318 | 2.69e-64 | 206 |
| MS.gene071108.t1 | AT2G43480 | 36.943 | 314 | 187 | 4 | 19 | 326 | 27 | 335 | 1.44e-61 | 199 |
| MS.gene071108.t1 | AT5G24070 | 35.103 | 339 | 193 | 7 | 7 | 326 | 5 | 335 | 4.04e-61 | 198 |
| MS.gene071108.t1 | AT3G28200 | 35.505 | 307 | 190 | 2 | 22 | 326 | 16 | 316 | 7.05e-61 | 197 |
| MS.gene071108.t1 | AT2G37130 | 32.899 | 307 | 196 | 4 | 24 | 326 | 27 | 327 | 6.54e-53 | 177 |
| MS.gene071108.t1 | AT3G17070 | 32.132 | 333 | 202 | 7 | 5 | 322 | 12 | 335 | 2.12e-52 | 176 |
| MS.gene071108.t1 | AT2G37130 | 33.223 | 301 | 191 | 4 | 30 | 326 | 2 | 296 | 2.81e-52 | 174 |
| MS.gene071108.t1 | AT2G35380 | 38.735 | 253 | 133 | 5 | 88 | 326 | 3 | 247 | 1.08e-48 | 164 |
| MS.gene071108.t1 | AT5G39580 | 44.279 | 201 | 102 | 4 | 3 | 200 | 1 | 194 | 9.95e-48 | 160 |
| MS.gene071108.t1 | AT4G25980 | 45.665 | 173 | 91 | 2 | 21 | 193 | 65 | 234 | 2.69e-45 | 156 |
| MS.gene071108.t1 | AT2G24800 | 45.509 | 167 | 88 | 1 | 25 | 191 | 29 | 192 | 1.29e-42 | 147 |
| MS.gene071108.t1 | AT3G17070 | 30.824 | 279 | 172 | 7 | 55 | 322 | 4 | 272 | 3.78e-39 | 139 |
| MS.gene071108.t1 | AT3G42570 | 33.019 | 106 | 70 | 1 | 89 | 193 | 44 | 149 | 9.05e-14 | 68.2 |
Find 61 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTTTGCCAACATGAAAA+TGG | 0.167018 | 4.3:+51543549 | None:intergenic |
| AATGACCTAGTCTTGCTTTC+TGG | 0.177027 | 4.3:+51544829 | MS.gene071108:CDS |
| ATTTGCCTTATAGCAATAAT+TGG | 0.198175 | 4.3:+51543601 | MS.gene071108:CDS |
| ATTTACAGGGTGGGCCTTAT+TGG | 0.252130 | 4.3:+51544680 | MS.gene071108:intron |
| CAAAACAATTTGTTCAGCTT+CGG | 0.301002 | 4.3:-51543671 | None:intergenic |
| TTGATCCAATTATTGCTATA+AGG | 0.314997 | 4.3:-51543606 | None:intergenic |
| GCATATTCACCGTCTAGATC+TGG | 0.345112 | 4.3:-51545302 | None:intergenic |
| ACTGTCCTTCTAACACTCTT+TGG | 0.345513 | 4.3:+51544787 | MS.gene071108:CDS |
| TAGCCTCGAAGTGTAAGATT+TGG | 0.347680 | 4.3:-51544096 | None:intergenic |
| AAAACAATTTGTTCAGCTTC+GGG | 0.365475 | 4.3:-51543670 | None:intergenic |
| GGAAGGTTCCAACAGGTAGA+AGG | 0.383934 | 4.3:+51544701 | MS.gene071108:CDS |
| GGGAGAATTAATGTCAAGAT+TGG | 0.389587 | 4.3:+51545566 | MS.gene071108:CDS |
| TCAAATGTATTACGACTTCC+AGG | 0.390217 | 4.3:-51545389 | None:intergenic |
| TCAAACCACACTTATTGAAA+TGG | 0.390578 | 4.3:+51545364 | MS.gene071108:CDS |
| AGTCGTAATACATTTGATCT+TGG | 0.396009 | 4.3:+51545395 | MS.gene071108:CDS |
| TAAGCAATGCAGCATCTGAT+TGG | 0.403489 | 4.3:-51545454 | None:intergenic |
| AGCATCCTTCTCAGCTTGAT+TGG | 0.415273 | 4.3:-51544070 | None:intergenic |
| ATTTCAGGTGCACACACAAT+TGG | 0.433140 | 4.3:+51545215 | MS.gene071108:intron |
| CTAACACTCTTTGGCAATGT+TGG | 0.457055 | 4.3:+51544796 | MS.gene071108:CDS |
| ATCTTTGCCAACATGAAAAT+GGG | 0.462367 | 4.3:+51543550 | None:intergenic |
| CCTGTTGGAACCTTCCAATA+AGG | 0.463341 | 4.3:-51544694 | None:intergenic |
| ATTCCAAATCTTACACTTCG+AGG | 0.467504 | 4.3:+51544093 | MS.gene071108:CDS |
| ATACCTTGACAAAGCAATCA+TGG | 0.472713 | 4.3:-51543759 | None:intergenic |
| GGGAAGCCAGAGTTACTTCA+AGG | 0.476148 | 4.3:+51543570 | MS.gene071108:CDS |
| TTAAAACCTTGAAGTAACTC+TGG | 0.484915 | 4.3:-51543576 | None:intergenic |
| CAAGCAAGTAGTTAAGAGAA+GGG | 0.488778 | 4.3:+51545424 | MS.gene071108:CDS |
| CATTGCCAAAGAGTGTTAGA+AGG | 0.490387 | 4.3:-51544792 | None:intergenic |
| TCAAGCAAGTAGTTAAGAGA+AGG | 0.493471 | 4.3:+51545423 | MS.gene071108:CDS |
| CATATTCACCGTCTAGATCT+GGG | 0.504303 | 4.3:-51545301 | None:intergenic |
| CCTTATTGGAAGGTTCCAAC+AGG | 0.506222 | 4.3:+51544694 | MS.gene071108:CDS |
| AGGACAGTGAGGTTGTGAAA+TGG | 0.507765 | 4.3:-51544772 | None:intergenic |
| TGTTGAAATTGATGAGCAAT+GGG | 0.507805 | 4.3:-51545243 | None:intergenic |
| TAATGAATTTGGCAAGTCCA+TGG | 0.508920 | 4.3:+51545535 | MS.gene071108:CDS |
| GGAGAATTAATGTCAAGATT+GGG | 0.509355 | 4.3:+51545567 | MS.gene071108:CDS |
| AGCTGCTAGTGATGGTACAC+TGG | 0.519920 | 4.3:-51543716 | None:intergenic |
| ATACCATCCCTTCTACCTGT+TGG | 0.533294 | 4.3:-51544709 | None:intergenic |
| TTTCCATGATTGCTTTGTCA+AGG | 0.540216 | 4.3:+51543756 | MS.gene071108:CDS |
| ACAGGGTGGGCCTTATTGGA+AGG | 0.541477 | 4.3:+51544684 | MS.gene071108:intron |
| GTGAGGTTGTGAAATGGAGC+AGG | 0.547960 | 4.3:-51544766 | None:intergenic |
| GAAGGTTCCAACAGGTAGAA+GGG | 0.566125 | 4.3:+51544702 | MS.gene071108:CDS |
| ACTCATGCTCAATTGCAGCC+AGG | 0.571279 | 4.3:+51543628 | MS.gene071108:CDS |
| ACAAACCAATCAAGCTGAGA+AGG | 0.572023 | 4.3:+51544065 | MS.gene071108:CDS |
| TTGTTGAAATTGATGAGCAA+TGG | 0.572249 | 4.3:-51545244 | None:intergenic |
| AGGGTCCATTTCAATAAGTG+TGG | 0.580715 | 4.3:-51545369 | None:intergenic |
| AATGTCAAGATTGGGACTGA+GGG | 0.584429 | 4.3:+51545575 | MS.gene071108:CDS |
| ACACTTATTGAAATGGACCC+TGG | 0.584876 | 4.3:+51545371 | MS.gene071108:CDS |
| AAGCAAGTAGTTAAGAGAAG+GGG | 0.586770 | 4.3:+51545425 | MS.gene071108:CDS |
| TCAGCACAAGAGACAACACC+AGG | 0.593653 | 4.3:-51544162 | None:intergenic |
| TAATGTCAAGATTGGGACTG+AGG | 0.599035 | 4.3:+51545574 | MS.gene071108:CDS |
| GTTCCAACAGGTAGAAGGGA+TGG | 0.604391 | 4.3:+51544706 | MS.gene071108:CDS |
| ATGAGTGCAGCTGCTAGTGA+TGG | 0.606593 | 4.3:-51543724 | None:intergenic |
| GCATACCAGAAAGCAAGACT+AGG | 0.628390 | 4.3:-51544834 | None:intergenic |
| ATTTCAGGGATGTGATGCAT+CGG | 0.645633 | 4.3:+51544026 | MS.gene071108:intron |
| AAACAATTTGTTCAGCTTCG+GGG | 0.646205 | 4.3:-51543669 | None:intergenic |
| GATCAAGACCCAGATCTAGA+CGG | 0.657297 | 4.3:+51545293 | MS.gene071108:CDS |
| GGTTGTGAAATGGAGCAGGA+AGG | 0.663275 | 4.3:-51544762 | None:intergenic |
| GCTGCTAGTGATGGTACACT+GGG | 0.680818 | 4.3:-51543715 | None:intergenic |
| CAAATGTATTACGACTTCCA+GGG | 0.691933 | 4.3:-51545388 | None:intergenic |
| AGAGTGTTAGAAGGACAGTG+AGG | 0.714903 | 4.3:-51544783 | None:intergenic |
| ATTGCTCATCAATTTCAACA+AGG | 0.726588 | 4.3:+51545246 | MS.gene071108:CDS |
| CAGCACAAGAGACAACACCA+GGG | 0.782900 | 4.3:-51544161 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATAAATTAATTGAG+TGG | + | chr4.3:51543875-51543894 | MS.gene071108:intron | 10.0% |
| !! | TAATTTAAGAAAATAAAAGT+AGG | + | chr4.3:51545029-51545048 | MS.gene071108:intron | 10.0% |
| !! | GAAAAATTCTTTAATGAATT+TGG | + | chr4.3:51545524-51545543 | MS.gene071108:CDS | 15.0% |
| !! | GTTTAGTATGTATAATTATT+TGG | + | chr4.3:51544602-51544621 | MS.gene071108:intron | 15.0% |
| !! | TCAATTAGATAAATGTTATT+TGG | + | chr4.3:51544485-51544504 | MS.gene071108:intron | 15.0% |
| !!! | AATCTAAATTTTTTCTGATA+TGG | + | chr4.3:51544383-51544402 | MS.gene071108:intron | 15.0% |
| !!! | ATAATTATTTGGTTTTTTAG+TGG | + | chr4.3:51544613-51544632 | MS.gene071108:intron | 15.0% |
| !!! | CAAAACACTTTAAAATATAT+TGG | + | chr4.3:51544307-51544326 | MS.gene071108:intron | 15.0% |
| !!! | CAATATATTTTAAAGTGTTT+TGG | - | chr4.3:51544309-51544328 | None:intergenic | 15.0% |
| !! | TTATTATCTTATTGTGAATG+TGG | + | chr4.3:51543988-51544007 | MS.gene071108:intron | 20.0% |
| !!! | TATATTTTAAAGTGTTTTGG+AGG | - | chr4.3:51544306-51544325 | None:intergenic | 20.0% |
| !!! | TTTTAGTATCTCATTTCTAT+AGG | + | chr4.3:51544248-51544267 | MS.gene071108:intron | 20.0% |
| ! | AACTAATACATATGCATTTC+AGG | + | chr4.3:51544011-51544030 | MS.gene071108:intron | 25.0% |
| ! | ACCAAAACTATCATTATTTC+AGG | + | chr4.3:51545200-51545219 | MS.gene071108:intron | 25.0% |
| ! | ACTAATACATATGCATTTCA+GGG | + | chr4.3:51544012-51544031 | MS.gene071108:intron | 25.0% |
| ! | ATTTGCCTTATAGCAATAAT+TGG | + | chr4.3:51543601-51543620 | MS.gene071108:CDS | 25.0% |
| ! | TACTCGCTAGTAATTTATAA+TGG | - | chr4.3:51544884-51544903 | None:intergenic | 25.0% |
| ! | TTGATCCAATTATTGCTATA+AGG | - | chr4.3:51543609-51543628 | None:intergenic | 25.0% |
| !! | AAATGTTATTTGGTTATGCA+TGG | + | chr4.3:51544495-51544514 | MS.gene071108:intron | 25.0% |
| !! | ACAAGGCTATATAATTTTAC+TGG | + | chr4.3:51545263-51545282 | MS.gene071108:CDS | 25.0% |
| !! | ACCTGAAATAATGATAGTTT+TGG | - | chr4.3:51545204-51545223 | None:intergenic | 25.0% |
| !! | CTATATAATTTTACTGGCAA+GGG | + | chr4.3:51545269-51545288 | MS.gene071108:CDS | 25.0% |
| !! | TGGATTTTTGAATCTGAATT+GGG | + | chr4.3:51544327-51544346 | MS.gene071108:intron | 25.0% |
| !! | TTGGATTTTTGAATCTGAAT+TGG | + | chr4.3:51544326-51544345 | MS.gene071108:intron | 25.0% |
| !!! | TTTAGTTTGTGTGTAGAATT+TGG | - | chr4.3:51544859-51544878 | None:intergenic | 25.0% |
| AGTCGTAATACATTTGATCT+TGG | + | chr4.3:51545395-51545414 | MS.gene071108:CDS | 30.0% | |
| ATAAATTACTAGCGAGTAGA+CGG | + | chr4.3:51544886-51544905 | MS.gene071108:intron | 30.0% | |
| ATGATTGACATGGATTTACA+GGG | + | chr4.3:51544667-51544686 | MS.gene071108:intron | 30.0% | |
| ATTGCTCATCAATTTCAACA+AGG | + | chr4.3:51545246-51545265 | MS.gene071108:CDS | 30.0% | |
| CTGATATGGTGTATATAGTT+TGG | + | chr4.3:51544397-51544416 | MS.gene071108:intron | 30.0% | |
| GGAGAATTAATGTCAAGATT+GGG | + | chr4.3:51545567-51545586 | MS.gene071108:CDS | 30.0% | |
| TCAAACCACACTTATTGAAA+TGG | + | chr4.3:51545364-51545383 | MS.gene071108:CDS | 30.0% | |
| TGTTGAAATTGATGAGCAAT+GGG | - | chr4.3:51545246-51545265 | None:intergenic | 30.0% | |
| TTAAAACCTTGAAGTAACTC+TGG | - | chr4.3:51543579-51543598 | None:intergenic | 30.0% | |
| TTGTTGAAATTGATGAGCAA+TGG | - | chr4.3:51545247-51545266 | None:intergenic | 30.0% | |
| ! | AAAACAATTTGTTCAGCTTC+GGG | - | chr4.3:51543673-51543692 | None:intergenic | 30.0% |
| ! | CAAAACAATTTGTTCAGCTT+CGG | - | chr4.3:51543674-51543693 | None:intergenic | 30.0% |
| ! | GCTATATAATTTTACTGGCA+AGG | + | chr4.3:51545268-51545287 | MS.gene071108:CDS | 30.0% |
| ! | GTCAATATTTAAAACTGACG+TGG | + | chr4.3:51545115-51545134 | MS.gene071108:intron | 30.0% |
| !!! | AGTGTTTTGGAGGTTTTTAT+AGG | - | chr4.3:51544296-51544315 | None:intergenic | 30.0% |
| AAGCAAGTAGTTAAGAGAAG+GGG | + | chr4.3:51545425-51545444 | MS.gene071108:CDS | 35.0% | |
| AGTAGAAAAAACAGTCAGAC+GGG | - | chr4.3:51544933-51544952 | None:intergenic | 35.0% | |
| ATACCTTGACAAAGCAATCA+TGG | - | chr4.3:51543762-51543781 | None:intergenic | 35.0% | |
| ATCATGGCAGAACAAACAAA+TGG | - | chr4.3:51544652-51544671 | None:intergenic | 35.0% | |
| ATTCCAAATCTTACACTTCG+AGG | + | chr4.3:51544093-51544112 | MS.gene071108:CDS | 35.0% | |
| CAAATGTATTACGACTTCCA+GGG | - | chr4.3:51545391-51545410 | None:intergenic | 35.0% | |
| CAAGCAAGTAGTTAAGAGAA+GGG | + | chr4.3:51545424-51545443 | MS.gene071108:CDS | 35.0% | |
| CAGTAGAAAAAACAGTCAGA+CGG | - | chr4.3:51544934-51544953 | None:intergenic | 35.0% | |
| CATGATTGACATGGATTTAC+AGG | + | chr4.3:51544666-51544685 | MS.gene071108:intron | 35.0% | |
| CTGTAAATCCATGTCAATCA+TGG | - | chr4.3:51544668-51544687 | None:intergenic | 35.0% | |
| GGGAGAATTAATGTCAAGAT+TGG | + | chr4.3:51545566-51545585 | MS.gene071108:CDS | 35.0% | |
| TAAATTACTAGCGAGTAGAC+GGG | + | chr4.3:51544887-51544906 | MS.gene071108:intron | 35.0% | |
| TAATGAATTTGGCAAGTCCA+TGG | + | chr4.3:51545535-51545554 | MS.gene071108:CDS | 35.0% | |
| TCAAATGTATTACGACTTCC+AGG | - | chr4.3:51545392-51545411 | None:intergenic | 35.0% | |
| TCAAGCAAGTAGTTAAGAGA+AGG | + | chr4.3:51545423-51545442 | MS.gene071108:CDS | 35.0% | |
| TGCCTAAAAAAACACTGACA+CGG | + | chr4.3:51544972-51544991 | MS.gene071108:intron | 35.0% | |
| TTTCCATGATTGCTTTGTCA+AGG | + | chr4.3:51543756-51543775 | MS.gene071108:CDS | 35.0% | |
| ! | AAACAATTTGTTCAGCTTCG+GGG | - | chr4.3:51543672-51543691 | None:intergenic | 35.0% |
| ! | AATATTGACGCATTGACATG+AGG | - | chr4.3:51545104-51545123 | None:intergenic | 35.0% |
| !! | TAGCATCGACATATTGATGT+GGG | - | chr4.3:51543846-51543865 | None:intergenic | 35.0% |
| !!! | AATTCTCCCCATTTTTTCCA+TGG | - | chr4.3:51545555-51545574 | None:intergenic | 35.0% |
| AATGTCAAGATTGGGACTGA+GGG | + | chr4.3:51545575-51545594 | MS.gene071108:CDS | 40.0% | |
| ACAAACCAATCAAGCTGAGA+AGG | + | chr4.3:51544065-51544084 | MS.gene071108:CDS | 40.0% | |
| ACACTTATTGAAATGGACCC+TGG | + | chr4.3:51545371-51545390 | MS.gene071108:CDS | 40.0% | |
| ACTGTCCTTCTAACACTCTT+TGG | + | chr4.3:51544787-51544806 | MS.gene071108:CDS | 40.0% | |
| AGGGTCCATTTCAATAAGTG+TGG | - | chr4.3:51545372-51545391 | None:intergenic | 40.0% | |
| ATTGACATGGATTTACAGGG+TGG | + | chr4.3:51544670-51544689 | MS.gene071108:intron | 40.0% | |
| ATTTCAGGGATGTGATGCAT+CGG | + | chr4.3:51544026-51544045 | MS.gene071108:intron | 40.0% | |
| CATATTCACCGTCTAGATCT+GGG | - | chr4.3:51545304-51545323 | None:intergenic | 40.0% | |
| CTAACACTCTTTGGCAATGT+TGG | + | chr4.3:51544796-51544815 | MS.gene071108:CDS | 40.0% | |
| CTTGTTGAAAAAGAATGCCC+TGG | + | chr4.3:51544144-51544163 | MS.gene071108:CDS | 40.0% | |
| GACGTGTCTATTGTATGACA+TGG | - | chr4.3:51543925-51543944 | None:intergenic | 40.0% | |
| GCAAGTCCATGGAAAAAATG+GGG | + | chr4.3:51545546-51545565 | MS.gene071108:CDS | 40.0% | |
| GGCAAGTCCATGGAAAAAAT+GGG | + | chr4.3:51545545-51545564 | MS.gene071108:CDS | 40.0% | |
| TAAGCAATGCAGCATCTGAT+TGG | - | chr4.3:51545457-51545476 | None:intergenic | 40.0% | |
| TAATGTCAAGATTGGGACTG+AGG | + | chr4.3:51545574-51545593 | MS.gene071108:CDS | 40.0% | |
| TAGCCTCGAAGTGTAAGATT+TGG | - | chr4.3:51544099-51544118 | None:intergenic | 40.0% | |
| TGGCAAGTCCATGGAAAAAA+TGG | + | chr4.3:51545544-51545563 | MS.gene071108:CDS | 40.0% | |
| TTGACATGGATTTACAGGGT+GGG | + | chr4.3:51544671-51544690 | MS.gene071108:intron | 40.0% | |
| TTGTTCTGCCATGATTGACA+TGG | + | chr4.3:51544657-51544676 | MS.gene071108:intron | 40.0% | |
| ! | ACGTCTTTCATCAGAAGTGT+CGG | + | chr4.3:51543940-51543959 | MS.gene071108:intron | 40.0% |
| ! | ATTTCAGGTGCACACACAAT+TGG | + | chr4.3:51545215-51545234 | MS.gene071108:intron | 40.0% |
| ! | CAGCTTTTAGCATAGAAACC+TGG | - | chr4.3:51543649-51543668 | None:intergenic | 40.0% |
| !! | AATGACCTAGTCTTGCTTTC+TGG | + | chr4.3:51544829-51544848 | MS.gene071108:CDS | 40.0% |
| !! | CATTGCCAAAGAGTGTTAGA+AGG | - | chr4.3:51544795-51544814 | None:intergenic | 40.0% |
| !! | CTAGCATCGACATATTGATG+TGG | - | chr4.3:51543847-51543866 | None:intergenic | 40.0% |
| !!! | CAGGGCATTCTTTTTCAACA+AGG | - | chr4.3:51544146-51544165 | None:intergenic | 40.0% |
| !!! | GACCGTGTCAGTGTTTTTTT+AGG | - | chr4.3:51544977-51544996 | None:intergenic | 40.0% |
| AGCATCCTTCTCAGCTTGAT+TGG | - | chr4.3:51544073-51544092 | None:intergenic | 45.0% | |
| AGGACAGTGAGGTTGTGAAA+TGG | - | chr4.3:51544775-51544794 | None:intergenic | 45.0% | |
| ATACCATCCCTTCTACCTGT+TGG | - | chr4.3:51544712-51544731 | None:intergenic | 45.0% | |
| CCTGTTGGAACCTTCCAATA+AGG | - | chr4.3:51544697-51544716 | None:intergenic | 45.0% | |
| CCTTATTGGAAGGTTCCAAC+AGG | + | chr4.3:51544694-51544713 | MS.gene071108:CDS | 45.0% | |
| GAAGGTTCCAACAGGTAGAA+GGG | + | chr4.3:51544702-51544721 | MS.gene071108:CDS | 45.0% | |
| GATCAAGACCCAGATCTAGA+CGG | + | chr4.3:51545293-51545312 | MS.gene071108:CDS | 45.0% | |
| GCATACCAGAAAGCAAGACT+AGG | - | chr4.3:51544837-51544856 | None:intergenic | 45.0% | |
| GCATATTCACCGTCTAGATC+TGG | - | chr4.3:51545305-51545324 | None:intergenic | 45.0% | |
| TTGAGTGGAATCACGTGTGT+TGG | + | chr4.3:51543890-51543909 | MS.gene071108:intron | 45.0% | |
| ! | AGAGTGTTAGAAGGACAGTG+AGG | - | chr4.3:51544786-51544805 | None:intergenic | 45.0% |
| ! | ATTTACAGGGTGGGCCTTAT+TGG | + | chr4.3:51544680-51544699 | MS.gene071108:intron | 45.0% |
| !!! | TTTTTTTTTTTTTTTTAACT+CGG | - | chr4.3:51545076-51545095 | None:intergenic | 5.0% |
| ACTCATGCTCAATTGCAGCC+AGG | + | chr4.3:51543628-51543647 | MS.gene071108:CDS | 50.0% | |
| AGCTGCTAGTGATGGTACAC+TGG | - | chr4.3:51543719-51543738 | None:intergenic | 50.0% | |
| ATGAGTGCAGCTGCTAGTGA+TGG | - | chr4.3:51543727-51543746 | None:intergenic | 50.0% | |
| CAGCACAAGAGACAACACCA+GGG | - | chr4.3:51544164-51544183 | None:intergenic | 50.0% | |
| GCTGCTAGTGATGGTACACT+GGG | - | chr4.3:51543718-51543737 | None:intergenic | 50.0% | |
| GGAAGGTTCCAACAGGTAGA+AGG | + | chr4.3:51544701-51544720 | MS.gene071108:CDS | 50.0% | |
| GGGAAGCCAGAGTTACTTCA+AGG | + | chr4.3:51543570-51543589 | MS.gene071108:CDS | 50.0% | |
| GGGCGCGCGAAAAATTCATA+GGG | + | chr4.3:51544347-51544366 | MS.gene071108:intron | 50.0% | |
| GGTTGTGAAATGGAGCAGGA+AGG | - | chr4.3:51544765-51544784 | None:intergenic | 50.0% | |
| GTGAGGTTGTGAAATGGAGC+AGG | - | chr4.3:51544769-51544788 | None:intergenic | 50.0% | |
| GTTCCAACAGGTAGAAGGGA+TGG | + | chr4.3:51544706-51544725 | MS.gene071108:CDS | 50.0% | |
| TCAGCACAAGAGACAACACC+AGG | - | chr4.3:51544165-51544184 | None:intergenic | 50.0% | |
| TGGGCGCGCGAAAAATTCAT+AGG | + | chr4.3:51544346-51544365 | MS.gene071108:intron | 50.0% | |
| !! | ACAGGGTGGGCCTTATTGGA+AGG | + | chr4.3:51544684-51544703 | MS.gene071108:intron | 55.0% |
| AGCGAGTAGACGGGCACGAA+CGG | + | chr4.3:51544896-51544915 | MS.gene071108:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 51543562 | 51545631 | 51543562 | ID=MS.gene071108 |
| chr4.3 | mRNA | 51543562 | 51545631 | 51543562 | ID=MS.gene071108.t1;Parent=MS.gene071108 |
| chr4.3 | exon | 51543562 | 51543777 | 51543562 | ID=MS.gene071108.t1.exon1;Parent=MS.gene071108.t1 |
| chr4.3 | CDS | 51543562 | 51543777 | 51543562 | ID=cds.MS.gene071108.t1;Parent=MS.gene071108.t1 |
| chr4.3 | exon | 51544033 | 51544224 | 51544033 | ID=MS.gene071108.t1.exon2;Parent=MS.gene071108.t1 |
| chr4.3 | CDS | 51544033 | 51544224 | 51544033 | ID=cds.MS.gene071108.t1;Parent=MS.gene071108.t1 |
| chr4.3 | exon | 51544688 | 51544850 | 51544688 | ID=MS.gene071108.t1.exon3;Parent=MS.gene071108.t1 |
| chr4.3 | CDS | 51544688 | 51544850 | 51544688 | ID=cds.MS.gene071108.t1;Parent=MS.gene071108.t1 |
| chr4.3 | exon | 51545222 | 51545631 | 51545222 | ID=MS.gene071108.t1.exon4;Parent=MS.gene071108.t1 |
| chr4.3 | CDS | 51545222 | 51545631 | 51545222 | ID=cds.MS.gene071108.t1;Parent=MS.gene071108.t1 |
| Gene Sequence |
| Protein sequence |
