Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51331.t1 | XP_013455618.1 | 96.9 | 326 | 10 | 0 | 1 | 326 | 1 | 326 | 4.70E-181 | 643.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51331.t1 | Q9SUT2 | 60.7 | 318 | 123 | 2 | 11 | 326 | 9 | 326 | 2.9e-110 | 399.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51331.t1 | A0A072UIQ7 | 96.9 | 326 | 10 | 0 | 1 | 326 | 1 | 326 | 3.4e-181 | 643.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene51331 | 0.809208 | 2.12E-50 | -1.69E-46 |
| MS.gene049549 | MS.gene51331 | 0.817132 | 3.86E-52 | -1.69E-46 |
| MS.gene050096 | MS.gene51331 | 0.801861 | 7.37E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene51331 | 0.81056 | 1.08E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene51331 | 0.804273 | 2.34E-49 | -1.69E-46 |
| MS.gene051996 | MS.gene51331 | 0.802742 | 4.86E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene51331 | 0.8135 | 2.48E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene51331 | 0.847163 | 1.38E-59 | -1.69E-46 |
| MS.gene052705 | MS.gene51331 | 0.800098 | 1.69E-48 | -1.69E-46 |
| MS.gene052706 | MS.gene51331 | 0.806839 | 6.77E-50 | -1.69E-46 |
| MS.gene053406 | MS.gene51331 | 0.817102 | 3.93E-52 | -1.69E-46 |
| MS.gene054138 | MS.gene51331 | 0.800113 | 1.68E-48 | -1.69E-46 |
| MS.gene054146 | MS.gene51331 | 0.800029 | 1.75E-48 | -1.69E-46 |
| MS.gene054277 | MS.gene51331 | 0.848282 | 6.77E-60 | -1.69E-46 |
| MS.gene054742 | MS.gene51331 | 0.871688 | 5.65E-67 | -1.69E-46 |
| MS.gene055601 | MS.gene51331 | 0.804639 | 1.96E-49 | -1.69E-46 |
| MS.gene055959 | MS.gene51331 | 0.812997 | 3.20E-51 | -1.69E-46 |
| MS.gene056330 | MS.gene51331 | 0.848961 | 4.39E-60 | -1.69E-46 |
| MS.gene056690 | MS.gene51331 | 0.827332 | 1.66E-54 | -1.69E-46 |
| MS.gene056899 | MS.gene51331 | 0.807128 | 5.88E-50 | -1.69E-46 |
| MS.gene056920 | MS.gene51331 | 0.852297 | 5.06E-61 | -1.69E-46 |
| MS.gene056922 | MS.gene51331 | 0.842681 | 2.23E-58 | -1.69E-46 |
| MS.gene056923 | MS.gene51331 | 0.837408 | 5.29E-57 | -1.69E-46 |
| MS.gene056924 | MS.gene51331 | 0.836332 | 9.96E-57 | -1.69E-46 |
| MS.gene057261 | MS.gene51331 | 0.81711 | 3.91E-52 | -1.69E-46 |
| MS.gene057544 | MS.gene51331 | 0.817518 | 3.16E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene51331 | 0.823033 | 1.72E-53 | -1.69E-46 |
| MS.gene059955 | MS.gene51331 | 0.803345 | 3.64E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene51331 | 0.821054 | 4.95E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51331 | MS.gene69473 | PPI |
| MS.gene51331 | MS.gene35931 | PPI |
| MS.gene51331 | MS.gene014924 | PPI |
| MS.gene51331 | MS.gene35853 | PPI |
| MS.gene51331 | MS.gene038655 | PPI |
| MS.gene51331 | MS.gene029047 | PPI |
| MS.gene51331 | MS.gene32715 | PPI |
| MS.gene51331 | MS.gene71470 | PPI |
| MS.gene51331 | MS.gene35795 | PPI |
| MS.gene51331 | MS.gene80170 | PPI |
| MS.gene51331 | MS.gene009198 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51331.t1 | MTR_4g046713 | 96.933 | 326 | 10 | 0 | 1 | 326 | 1 | 326 | 0.0 | 660 |
| MS.gene51331.t1 | MTR_2g088770 | 71.341 | 328 | 89 | 4 | 1 | 326 | 1 | 325 | 6.48e-175 | 488 |
| MS.gene51331.t1 | MTR_7g107520 | 53.067 | 326 | 147 | 4 | 1 | 326 | 1 | 320 | 3.63e-121 | 351 |
| MS.gene51331.t1 | MTR_3g092990 | 46.395 | 319 | 170 | 1 | 9 | 326 | 8 | 326 | 6.98e-99 | 295 |
| MS.gene51331.t1 | MTR_2g029820 | 44.892 | 323 | 170 | 4 | 11 | 326 | 9 | 330 | 5.87e-93 | 281 |
| MS.gene51331.t1 | MTR_5g017860 | 43.533 | 317 | 177 | 2 | 11 | 326 | 11 | 326 | 3.40e-92 | 278 |
| MS.gene51331.t1 | MTR_5g017850 | 42.587 | 317 | 180 | 2 | 11 | 326 | 11 | 326 | 1.41e-91 | 276 |
| MS.gene51331.t1 | MTR_2g029800 | 44.237 | 321 | 171 | 4 | 13 | 326 | 11 | 330 | 4.38e-91 | 276 |
| MS.gene51331.t1 | MTR_2g029815 | 44.828 | 319 | 171 | 4 | 12 | 326 | 13 | 330 | 7.88e-91 | 275 |
| MS.gene51331.t1 | MTR_5g022870 | 47.095 | 327 | 159 | 7 | 3 | 326 | 1 | 316 | 1.07e-90 | 273 |
| MS.gene51331.t1 | MTR_5g021060 | 48.344 | 302 | 153 | 3 | 27 | 326 | 30 | 330 | 2.85e-90 | 273 |
| MS.gene51331.t1 | MTR_2g029850 | 44.548 | 321 | 170 | 5 | 13 | 326 | 11 | 330 | 3.29e-89 | 271 |
| MS.gene51331.t1 | MTR_1g101830 | 43.827 | 324 | 171 | 6 | 6 | 326 | 7 | 322 | 5.95e-89 | 269 |
| MS.gene51331.t1 | MTR_2g040000 | 44.444 | 324 | 171 | 5 | 9 | 326 | 11 | 331 | 3.13e-88 | 268 |
| MS.gene51331.t1 | MTR_2g008710 | 44.954 | 327 | 168 | 5 | 7 | 326 | 4 | 325 | 3.37e-88 | 267 |
| MS.gene51331.t1 | MTR_8g075100 | 45.246 | 305 | 161 | 4 | 22 | 326 | 21 | 319 | 5.01e-88 | 267 |
| MS.gene51331.t1 | MTR_1g054205 | 41.411 | 326 | 186 | 4 | 5 | 326 | 2 | 326 | 7.42e-88 | 266 |
| MS.gene51331.t1 | MTR_2g028980 | 44.000 | 325 | 171 | 4 | 5 | 326 | 14 | 330 | 1.96e-87 | 266 |
| MS.gene51331.t1 | MTR_2g029740 | 43.902 | 328 | 173 | 5 | 9 | 326 | 4 | 330 | 3.25e-87 | 266 |
| MS.gene51331.t1 | MTR_3g092990 | 44.201 | 319 | 166 | 2 | 9 | 326 | 8 | 315 | 1.15e-86 | 263 |
| MS.gene51331.t1 | MTR_0155s0040 | 44.625 | 307 | 159 | 4 | 20 | 326 | 20 | 315 | 1.73e-86 | 263 |
| MS.gene51331.t1 | MTR_7g093370 | 41.486 | 323 | 184 | 4 | 8 | 326 | 50 | 371 | 2.02e-86 | 265 |
| MS.gene51331.t1 | MTR_2g029830 | 44.805 | 308 | 166 | 3 | 22 | 326 | 23 | 329 | 5.76e-86 | 263 |
| MS.gene51331.t1 | MTR_3g094650 | 41.214 | 313 | 173 | 4 | 13 | 322 | 14 | 318 | 1.70e-85 | 260 |
| MS.gene51331.t1 | MTR_1g077000 | 41.304 | 322 | 178 | 3 | 5 | 326 | 17 | 327 | 8.88e-85 | 259 |
| MS.gene51331.t1 | MTR_8g076820 | 45.695 | 302 | 161 | 3 | 27 | 326 | 30 | 330 | 9.41e-85 | 259 |
| MS.gene51331.t1 | MTR_4g125940 | 42.154 | 325 | 180 | 4 | 7 | 326 | 8 | 329 | 4.26e-84 | 257 |
| MS.gene51331.t1 | MTR_1g038680 | 45.724 | 304 | 159 | 5 | 28 | 326 | 30 | 332 | 1.10e-83 | 256 |
| MS.gene51331.t1 | MTR_2g029560 | 42.202 | 327 | 184 | 5 | 3 | 326 | 1 | 325 | 1.27e-83 | 256 |
| MS.gene51331.t1 | MTR_4g114210 | 42.236 | 322 | 176 | 4 | 10 | 326 | 4 | 320 | 1.29e-83 | 255 |
| MS.gene51331.t1 | MTR_2g029750 | 42.598 | 331 | 182 | 4 | 3 | 326 | 1 | 330 | 9.74e-83 | 254 |
| MS.gene51331.t1 | MTR_3g072190 | 42.547 | 322 | 174 | 4 | 8 | 326 | 5 | 318 | 7.99e-82 | 251 |
| MS.gene51331.t1 | MTR_3g466200 | 41.916 | 334 | 172 | 8 | 1 | 326 | 1 | 320 | 6.60e-81 | 249 |
| MS.gene51331.t1 | MTR_2g029860 | 42.368 | 321 | 181 | 3 | 9 | 326 | 11 | 330 | 8.72e-81 | 249 |
| MS.gene51331.t1 | MTR_7g086820 | 41.447 | 304 | 167 | 4 | 25 | 326 | 18 | 312 | 4.25e-80 | 246 |
| MS.gene51331.t1 | MTR_2g029730 | 42.320 | 319 | 179 | 4 | 11 | 326 | 10 | 326 | 1.09e-79 | 246 |
| MS.gene51331.t1 | MTR_8g062780 | 39.634 | 328 | 190 | 5 | 3 | 326 | 1 | 324 | 1.55e-79 | 245 |
| MS.gene51331.t1 | MTR_6g027440 | 40.187 | 321 | 180 | 5 | 10 | 326 | 2 | 314 | 2.93e-79 | 244 |
| MS.gene51331.t1 | MTR_2g084080 | 39.385 | 325 | 186 | 4 | 5 | 326 | 1 | 317 | 3.01e-79 | 244 |
| MS.gene51331.t1 | MTR_1g025980 | 40.694 | 317 | 179 | 4 | 11 | 325 | 8 | 317 | 1.70e-78 | 242 |
| MS.gene51331.t1 | MTR_2g084110 | 39.688 | 320 | 182 | 4 | 8 | 326 | 8 | 317 | 1.86e-78 | 242 |
| MS.gene51331.t1 | MTR_4g083710 | 39.877 | 326 | 181 | 6 | 9 | 326 | 6 | 324 | 1.96e-78 | 242 |
| MS.gene51331.t1 | MTR_2g029910 | 42.236 | 322 | 177 | 6 | 13 | 326 | 12 | 332 | 2.50e-78 | 243 |
| MS.gene51331.t1 | MTR_7g072510 | 38.365 | 318 | 187 | 3 | 10 | 326 | 3 | 312 | 2.95e-78 | 241 |
| MS.gene51331.t1 | MTR_1g086320 | 40.498 | 321 | 185 | 4 | 11 | 326 | 14 | 333 | 3.92e-78 | 242 |
| MS.gene51331.t1 | MTR_7g029030 | 41.049 | 324 | 182 | 5 | 5 | 326 | 4 | 320 | 7.47e-78 | 241 |
| MS.gene51331.t1 | MTR_4g029170 | 39.818 | 329 | 185 | 6 | 3 | 326 | 1 | 321 | 1.34e-77 | 240 |
| MS.gene51331.t1 | MTR_2g437770 | 44.884 | 303 | 153 | 7 | 27 | 326 | 50 | 341 | 1.46e-77 | 241 |
| MS.gene51331.t1 | MTR_7g072480 | 40.252 | 318 | 181 | 3 | 10 | 326 | 7 | 316 | 3.94e-77 | 239 |
| MS.gene51331.t1 | MTR_5g074970 | 40.000 | 320 | 179 | 5 | 12 | 326 | 15 | 326 | 4.40e-77 | 239 |
| MS.gene51331.t1 | MTR_4g125940 | 45.091 | 275 | 143 | 4 | 57 | 326 | 3 | 274 | 6.53e-77 | 237 |
| MS.gene51331.t1 | MTR_1g086490 | 38.415 | 328 | 189 | 4 | 11 | 326 | 14 | 340 | 7.43e-77 | 239 |
| MS.gene51331.t1 | MTR_3g094670 | 40.952 | 315 | 175 | 4 | 11 | 322 | 12 | 318 | 1.32e-76 | 238 |
| MS.gene51331.t1 | MTR_4g087965 | 42.105 | 304 | 169 | 5 | 26 | 323 | 41 | 343 | 2.75e-76 | 238 |
| MS.gene51331.t1 | MTR_1g115900 | 39.755 | 327 | 181 | 8 | 5 | 326 | 6 | 321 | 3.02e-76 | 237 |
| MS.gene51331.t1 | MTR_4g030890 | 40.909 | 308 | 177 | 4 | 20 | 326 | 93 | 396 | 5.29e-76 | 239 |
| MS.gene51331.t1 | MTR_2g084020 | 41.368 | 307 | 170 | 4 | 22 | 326 | 20 | 318 | 5.57e-76 | 236 |
| MS.gene51331.t1 | MTR_7g086870 | 39.735 | 302 | 172 | 4 | 25 | 326 | 20 | 311 | 1.08e-75 | 235 |
| MS.gene51331.t1 | MTR_5g016010 | 40.752 | 319 | 184 | 2 | 11 | 325 | 11 | 328 | 1.29e-75 | 235 |
| MS.gene51331.t1 | MTR_5g083860 | 40.498 | 321 | 178 | 4 | 12 | 326 | 12 | 325 | 1.36e-75 | 235 |
| MS.gene51331.t1 | MTR_5g014100 | 43.709 | 302 | 164 | 4 | 31 | 326 | 30 | 331 | 4.64e-75 | 234 |
| MS.gene51331.t1 | MTR_4g029200 | 37.126 | 334 | 183 | 4 | 12 | 326 | 13 | 338 | 4.67e-75 | 234 |
| MS.gene51331.t1 | MTR_4g029190 | 37.910 | 335 | 181 | 5 | 12 | 326 | 13 | 340 | 1.73e-74 | 233 |
| MS.gene51331.t1 | MTR_2g084010 | 41.368 | 307 | 170 | 4 | 22 | 326 | 20 | 318 | 2.43e-74 | 232 |
| MS.gene51331.t1 | MTR_4g074995 | 39.879 | 331 | 171 | 7 | 1 | 326 | 1 | 308 | 2.89e-74 | 231 |
| MS.gene51331.t1 | MTR_4g122640 | 40.717 | 307 | 175 | 5 | 23 | 326 | 34 | 336 | 5.06e-74 | 231 |
| MS.gene51331.t1 | MTR_4g029180 | 40.468 | 299 | 167 | 5 | 31 | 326 | 31 | 321 | 6.75e-74 | 231 |
| MS.gene51331.t1 | MTR_5g049280 | 39.744 | 312 | 179 | 7 | 22 | 326 | 28 | 337 | 7.03e-74 | 231 |
| MS.gene51331.t1 | MTR_2g084090 | 39.375 | 320 | 184 | 3 | 8 | 326 | 8 | 318 | 8.53e-74 | 230 |
| MS.gene51331.t1 | MTR_4g031140 | 39.344 | 305 | 180 | 4 | 23 | 326 | 24 | 324 | 1.52e-73 | 231 |
| MS.gene51331.t1 | MTR_5g074740 | 40.432 | 324 | 178 | 8 | 9 | 326 | 7 | 321 | 3.95e-73 | 229 |
| MS.gene51331.t1 | MTR_5g074760 | 40.123 | 324 | 179 | 8 | 9 | 326 | 7 | 321 | 6.03e-73 | 228 |
| MS.gene51331.t1 | MTR_3g094630 | 40.317 | 315 | 177 | 4 | 11 | 322 | 12 | 318 | 1.01e-72 | 228 |
| MS.gene51331.t1 | MTR_1g022970 | 41.914 | 303 | 172 | 3 | 27 | 326 | 46 | 347 | 1.62e-72 | 228 |
| MS.gene51331.t1 | MTR_4g095450 | 40.252 | 318 | 178 | 4 | 12 | 325 | 14 | 323 | 1.30e-71 | 225 |
| MS.gene51331.t1 | MTR_4g133800 | 41.611 | 298 | 165 | 5 | 30 | 326 | 44 | 333 | 1.81e-71 | 225 |
| MS.gene51331.t1 | MTR_2g008160 | 41.026 | 312 | 174 | 5 | 20 | 326 | 17 | 323 | 3.70e-71 | 224 |
| MS.gene51331.t1 | MTR_1g090760 | 37.152 | 323 | 197 | 5 | 9 | 326 | 9 | 330 | 4.25e-71 | 224 |
| MS.gene51331.t1 | MTR_2g084000 | 37.695 | 321 | 190 | 4 | 8 | 326 | 7 | 319 | 5.88e-71 | 223 |
| MS.gene51331.t1 | MTR_1g009750 | 40.909 | 330 | 187 | 5 | 3 | 326 | 1 | 328 | 7.93e-71 | 223 |
| MS.gene51331.t1 | MTR_3g467600 | 40.909 | 330 | 176 | 9 | 5 | 326 | 6 | 324 | 5.54e-70 | 221 |
| MS.gene51331.t1 | MTR_7g026990 | 37.423 | 326 | 194 | 3 | 2 | 326 | 6 | 322 | 6.97e-70 | 220 |
| MS.gene51331.t1 | MTR_4g127670 | 40.468 | 299 | 174 | 3 | 26 | 322 | 23 | 319 | 1.01e-69 | 220 |
| MS.gene51331.t1 | MTR_2g008730 | 40.061 | 327 | 160 | 6 | 7 | 326 | 4 | 301 | 9.17e-69 | 217 |
| MS.gene51331.t1 | MTR_2g029830 | 44.961 | 258 | 138 | 3 | 72 | 326 | 5 | 261 | 1.73e-68 | 216 |
| MS.gene51331.t1 | MTR_4g074990 | 38.438 | 320 | 169 | 6 | 12 | 326 | 9 | 305 | 2.22e-68 | 216 |
| MS.gene51331.t1 | MTR_3g466180 | 37.309 | 327 | 196 | 3 | 1 | 326 | 5 | 323 | 3.74e-68 | 216 |
| MS.gene51331.t1 | MTR_5g074710 | 37.952 | 332 | 189 | 9 | 1 | 326 | 1 | 321 | 2.08e-67 | 214 |
| MS.gene51331.t1 | MTR_3g072190 | 43.969 | 257 | 135 | 3 | 71 | 326 | 3 | 251 | 2.02e-66 | 209 |
| MS.gene51331.t1 | MTR_3g105790 | 38.344 | 326 | 179 | 5 | 11 | 326 | 9 | 322 | 2.20e-65 | 209 |
| MS.gene51331.t1 | MTR_2g099175 | 38.037 | 326 | 189 | 6 | 9 | 326 | 15 | 335 | 2.81e-65 | 209 |
| MS.gene51331.t1 | MTR_6g043460 | 34.743 | 331 | 198 | 6 | 1 | 322 | 3 | 324 | 4.02e-65 | 209 |
| MS.gene51331.t1 | MTR_0286s0010 | 36.562 | 320 | 194 | 6 | 12 | 326 | 19 | 334 | 1.94e-62 | 202 |
| MS.gene51331.t1 | MTR_6g008075 | 36.562 | 320 | 194 | 6 | 12 | 326 | 19 | 334 | 1.94e-62 | 202 |
| MS.gene51331.t1 | MTR_1g009750 | 38.650 | 326 | 183 | 6 | 3 | 326 | 1 | 311 | 3.34e-62 | 200 |
| MS.gene51331.t1 | MTR_5g074860 | 36.615 | 325 | 187 | 8 | 6 | 322 | 8 | 321 | 7.31e-62 | 200 |
| MS.gene51331.t1 | MTR_6g043240 | 36.607 | 336 | 187 | 7 | 5 | 326 | 8 | 331 | 1.06e-61 | 200 |
| MS.gene51331.t1 | MTR_4g132110 | 35.786 | 299 | 185 | 2 | 30 | 326 | 35 | 328 | 3.32e-61 | 198 |
| MS.gene51331.t1 | MTR_2g067440 | 35.258 | 329 | 181 | 5 | 25 | 323 | 58 | 384 | 5.62e-61 | 199 |
| MS.gene51331.t1 | MTR_6g043280 | 35.093 | 322 | 193 | 7 | 11 | 326 | 21 | 332 | 1.98e-60 | 196 |
| MS.gene51331.t1 | MTR_4g074980 | 37.188 | 320 | 162 | 6 | 11 | 326 | 10 | 294 | 3.19e-60 | 195 |
| MS.gene51331.t1 | MTR_4g074980 | 42.857 | 252 | 132 | 5 | 11 | 258 | 10 | 253 | 9.25e-60 | 192 |
| MS.gene51331.t1 | MTR_2g077990 | 36.254 | 331 | 178 | 5 | 25 | 323 | 74 | 403 | 2.13e-59 | 196 |
| MS.gene51331.t1 | MTR_2g078610 | 35.347 | 331 | 181 | 6 | 25 | 323 | 74 | 403 | 2.73e-59 | 196 |
| MS.gene51331.t1 | MTR_4g132110 | 35.197 | 304 | 185 | 3 | 30 | 326 | 35 | 333 | 9.65e-59 | 192 |
| MS.gene51331.t1 | MTR_1g066710 | 35.082 | 305 | 189 | 3 | 25 | 326 | 25 | 323 | 2.59e-58 | 191 |
| MS.gene51331.t1 | MTR_2g008160 | 36.859 | 312 | 152 | 5 | 20 | 326 | 17 | 288 | 5.44e-57 | 186 |
| MS.gene51331.t1 | MTR_1g066380 | 34.951 | 309 | 184 | 6 | 25 | 326 | 25 | 323 | 1.57e-56 | 186 |
| MS.gene51331.t1 | MTR_1g066640 | 34.098 | 305 | 192 | 3 | 25 | 326 | 25 | 323 | 2.12e-56 | 186 |
| MS.gene51331.t1 | MTR_1g066680 | 34.426 | 305 | 190 | 4 | 25 | 326 | 25 | 322 | 6.35e-56 | 184 |
| MS.gene51331.t1 | MTR_2g078280 | 36.478 | 318 | 169 | 5 | 25 | 310 | 74 | 390 | 2.95e-55 | 185 |
| MS.gene51331.t1 | MTR_4g132490 | 33.333 | 321 | 203 | 4 | 11 | 326 | 13 | 327 | 8.15e-55 | 182 |
| MS.gene51331.t1 | MTR_5g033470 | 35.256 | 312 | 195 | 5 | 21 | 326 | 67 | 377 | 1.45e-54 | 182 |
| MS.gene51331.t1 | MTR_2g067450 | 36.928 | 306 | 183 | 6 | 25 | 325 | 9 | 309 | 1.84e-54 | 180 |
| MS.gene51331.t1 | MTR_0147s0010 | 33.754 | 317 | 176 | 5 | 27 | 323 | 77 | 379 | 1.16e-51 | 175 |
| MS.gene51331.t1 | MTR_2g008160 | 46.667 | 180 | 93 | 2 | 20 | 199 | 17 | 193 | 2.84e-48 | 161 |
| MS.gene51331.t1 | MTR_3g105790 | 37.549 | 253 | 139 | 4 | 84 | 326 | 3 | 246 | 4.48e-45 | 154 |
| MS.gene51331.t1 | MTR_5g074860 | 31.579 | 323 | 167 | 7 | 6 | 322 | 8 | 282 | 2.04e-41 | 145 |
| MS.gene51331.t1 | MTR_1g066380 | 32.700 | 263 | 160 | 6 | 71 | 326 | 3 | 255 | 3.01e-41 | 144 |
| MS.gene51331.t1 | MTR_5g074700 | 36.481 | 233 | 124 | 8 | 97 | 326 | 3 | 214 | 2.61e-36 | 130 |
| MS.gene51331.t1 | MTR_2g029880 | 38.776 | 196 | 107 | 5 | 133 | 326 | 4 | 188 | 8.55e-35 | 126 |
| MS.gene51331.t1 | MTR_7g072490 | 34.274 | 248 | 100 | 5 | 73 | 319 | 2 | 187 | 3.26e-32 | 119 |
| MS.gene51331.t1 | MTR_3g072210 | 36.269 | 193 | 113 | 4 | 136 | 326 | 54 | 238 | 1.01e-31 | 119 |
| MS.gene51331.t1 | MTR_3g072260 | 45.833 | 144 | 72 | 4 | 5 | 144 | 1 | 142 | 1.27e-29 | 110 |
| MS.gene51331.t1 | MTR_1g089005 | 45.669 | 127 | 56 | 2 | 12 | 132 | 7 | 126 | 3.88e-29 | 109 |
| MS.gene51331.t1 | MTR_7g086790 | 32.995 | 197 | 106 | 5 | 74 | 268 | 17 | 189 | 7.50e-24 | 97.1 |
| MS.gene51331.t1 | MTR_6g048160 | 61.765 | 68 | 23 | 1 | 66 | 133 | 22 | 86 | 1.65e-22 | 90.1 |
| MS.gene51331.t1 | MTR_2g077980 | 27.915 | 283 | 164 | 8 | 79 | 323 | 1 | 281 | 3.50e-22 | 94.7 |
| MS.gene51331.t1 | MTR_7g086810 | 42.975 | 121 | 44 | 1 | 25 | 145 | 4 | 99 | 4.39e-21 | 90.5 |
| MS.gene51331.t1 | MTR_4g114220 | 50.000 | 80 | 31 | 2 | 55 | 134 | 31 | 101 | 1.78e-20 | 86.3 |
| MS.gene51331.t1 | MTR_5g058120 | 34.969 | 163 | 92 | 4 | 161 | 322 | 6 | 155 | 1.84e-20 | 89.4 |
| MS.gene51331.t1 | MTR_2g078560 | 24.503 | 302 | 179 | 6 | 71 | 325 | 20 | 319 | 1.58e-18 | 85.1 |
| MS.gene51331.t1 | MTR_7g107500 | 43.902 | 82 | 45 | 1 | 245 | 326 | 17 | 97 | 1.53e-17 | 77.0 |
| MS.gene51331.t1 | MTR_6g071110 | 45.745 | 94 | 39 | 3 | 93 | 186 | 80 | 161 | 4.79e-15 | 72.0 |
| MS.gene51331.t1 | MTR_7g086785 | 35.897 | 117 | 68 | 2 | 72 | 181 | 3 | 119 | 8.51e-15 | 70.9 |
| MS.gene51331.t1 | MTR_4g012865 | 48.529 | 68 | 35 | 0 | 27 | 94 | 77 | 144 | 1.26e-14 | 70.9 |
| MS.gene51331.t1 | MTR_2g029930 | 33.333 | 108 | 42 | 4 | 13 | 104 | 1 | 94 | 5.70e-12 | 62.0 |
| MS.gene51331.t1 | MTR_4g031040 | 31.746 | 126 | 68 | 3 | 134 | 259 | 23 | 130 | 2.82e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51331.t1 | AT1G05260 | 62.179 | 312 | 116 | 2 | 16 | 326 | 15 | 325 | 7.69e-145 | 411 |
| MS.gene51331.t1 | AT4G11290 | 61.059 | 321 | 117 | 3 | 11 | 326 | 9 | 326 | 1.09e-144 | 411 |
| MS.gene51331.t1 | AT3G21770 | 59.223 | 309 | 124 | 2 | 16 | 323 | 18 | 325 | 8.15e-135 | 386 |
| MS.gene51331.t1 | AT5G15180 | 53.495 | 329 | 147 | 6 | 1 | 326 | 4 | 329 | 1.32e-120 | 350 |
| MS.gene51331.t1 | AT3G01190 | 52.960 | 321 | 142 | 6 | 10 | 326 | 6 | 321 | 1.46e-114 | 334 |
| MS.gene51331.t1 | AT1G05240 | 50.000 | 302 | 139 | 5 | 31 | 326 | 30 | 325 | 8.03e-104 | 307 |
| MS.gene51331.t1 | AT1G05250 | 50.000 | 302 | 139 | 5 | 31 | 326 | 30 | 325 | 8.03e-104 | 307 |
| MS.gene51331.t1 | AT2G18150 | 44.481 | 308 | 168 | 3 | 21 | 326 | 30 | 336 | 6.27e-91 | 275 |
| MS.gene51331.t1 | AT5G51890 | 42.320 | 319 | 173 | 5 | 12 | 326 | 11 | 322 | 1.22e-87 | 266 |
| MS.gene51331.t1 | AT2G39040 | 46.965 | 313 | 157 | 7 | 21 | 326 | 40 | 350 | 2.11e-87 | 266 |
| MS.gene51331.t1 | AT2G18140 | 43.344 | 323 | 179 | 4 | 7 | 326 | 14 | 335 | 1.29e-86 | 264 |
| MS.gene51331.t1 | AT4G36430 | 42.453 | 318 | 177 | 4 | 14 | 326 | 14 | 330 | 1.90e-86 | 263 |
| MS.gene51331.t1 | AT2G41480 | 42.643 | 333 | 179 | 6 | 1 | 326 | 1 | 328 | 2.04e-86 | 263 |
| MS.gene51331.t1 | AT3G03670 | 41.509 | 318 | 184 | 2 | 9 | 326 | 6 | 321 | 2.64e-86 | 263 |
| MS.gene51331.t1 | AT5G19890 | 43.465 | 329 | 172 | 7 | 3 | 326 | 8 | 327 | 7.26e-86 | 261 |
| MS.gene51331.t1 | AT5G17820 | 42.675 | 314 | 170 | 4 | 13 | 326 | 10 | 313 | 8.06e-86 | 261 |
| MS.gene51331.t1 | AT5G42180 | 42.444 | 311 | 174 | 3 | 12 | 322 | 8 | 313 | 3.44e-85 | 259 |
| MS.gene51331.t1 | AT3G32980 | 42.587 | 317 | 176 | 4 | 15 | 326 | 19 | 334 | 4.04e-85 | 260 |
| MS.gene51331.t1 | AT4G33420 | 43.218 | 317 | 167 | 5 | 12 | 326 | 20 | 325 | 4.61e-85 | 259 |
| MS.gene51331.t1 | AT5G17820 | 42.462 | 325 | 176 | 5 | 2 | 326 | 53 | 366 | 7.84e-85 | 260 |
| MS.gene51331.t1 | AT5G14130 | 41.509 | 318 | 179 | 5 | 12 | 326 | 17 | 330 | 1.06e-84 | 259 |
| MS.gene51331.t1 | AT4G33420 | 43.218 | 317 | 167 | 5 | 12 | 326 | 67 | 372 | 2.36e-84 | 259 |
| MS.gene51331.t1 | AT5G39580 | 42.378 | 328 | 176 | 7 | 3 | 326 | 1 | 319 | 2.72e-84 | 257 |
| MS.gene51331.t1 | AT5G14130 | 41.509 | 318 | 179 | 5 | 12 | 326 | 58 | 371 | 4.62e-84 | 258 |
| MS.gene51331.t1 | AT3G50990 | 45.928 | 307 | 163 | 3 | 22 | 326 | 36 | 341 | 6.30e-84 | 257 |
| MS.gene51331.t1 | AT5G06720 | 40.566 | 318 | 185 | 3 | 12 | 326 | 17 | 333 | 6.91e-84 | 257 |
| MS.gene51331.t1 | AT2G38390 | 40.312 | 320 | 186 | 4 | 11 | 326 | 15 | 333 | 7.83e-84 | 257 |
| MS.gene51331.t1 | AT5G66390 | 43.810 | 315 | 174 | 3 | 14 | 326 | 20 | 333 | 1.22e-83 | 256 |
| MS.gene51331.t1 | AT5G64120 | 40.719 | 334 | 182 | 6 | 3 | 326 | 1 | 328 | 3.19e-83 | 255 |
| MS.gene51331.t1 | AT4G08770 | 43.269 | 312 | 165 | 6 | 23 | 326 | 20 | 327 | 5.08e-83 | 255 |
| MS.gene51331.t1 | AT2G38380 | 40.938 | 320 | 184 | 4 | 11 | 326 | 15 | 333 | 6.13e-83 | 255 |
| MS.gene51331.t1 | AT3G49110 | 41.846 | 325 | 181 | 5 | 9 | 326 | 13 | 336 | 4.03e-82 | 253 |
| MS.gene51331.t1 | AT3G49120 | 41.640 | 317 | 179 | 4 | 15 | 326 | 20 | 335 | 9.01e-82 | 252 |
| MS.gene51331.t1 | AT5G06730 | 39.308 | 318 | 189 | 4 | 12 | 326 | 18 | 334 | 3.12e-81 | 251 |
| MS.gene51331.t1 | AT2G24800 | 41.639 | 305 | 171 | 3 | 25 | 326 | 29 | 329 | 2.19e-80 | 248 |
| MS.gene51331.t1 | AT1G14550 | 41.433 | 321 | 178 | 5 | 9 | 326 | 8 | 321 | 8.43e-80 | 246 |
| MS.gene51331.t1 | AT5G64100 | 43.333 | 300 | 159 | 5 | 30 | 326 | 40 | 331 | 5.50e-79 | 244 |
| MS.gene51331.t1 | AT4G37530 | 41.801 | 311 | 176 | 2 | 20 | 326 | 20 | 329 | 5.25e-78 | 241 |
| MS.gene51331.t1 | AT2G18980 | 43.161 | 329 | 176 | 5 | 3 | 326 | 1 | 323 | 5.32e-78 | 241 |
| MS.gene51331.t1 | AT1G44970 | 42.765 | 311 | 174 | 3 | 19 | 326 | 37 | 346 | 7.37e-78 | 242 |
| MS.gene51331.t1 | AT1G71695 | 42.904 | 303 | 163 | 5 | 27 | 326 | 44 | 339 | 1.49e-77 | 241 |
| MS.gene51331.t1 | AT4G08780 | 41.987 | 312 | 169 | 6 | 23 | 326 | 20 | 327 | 2.45e-77 | 240 |
| MS.gene51331.t1 | AT5G05340 | 40.984 | 305 | 171 | 3 | 24 | 326 | 27 | 324 | 3.70e-76 | 236 |
| MS.gene51331.t1 | AT1G49570 | 41.118 | 304 | 174 | 4 | 25 | 324 | 46 | 348 | 4.83e-76 | 237 |
| MS.gene51331.t1 | AT4G31760 | 39.937 | 318 | 182 | 5 | 12 | 326 | 15 | 326 | 6.74e-76 | 236 |
| MS.gene51331.t1 | AT1G14540 | 39.375 | 320 | 184 | 5 | 9 | 326 | 4 | 315 | 1.40e-75 | 235 |
| MS.gene51331.t1 | AT5G19880 | 38.788 | 330 | 195 | 5 | 3 | 326 | 1 | 329 | 9.27e-75 | 233 |
| MS.gene51331.t1 | AT4G16270 | 41.667 | 300 | 168 | 6 | 30 | 326 | 53 | 348 | 9.16e-74 | 231 |
| MS.gene51331.t1 | AT4G25980 | 39.564 | 321 | 184 | 5 | 12 | 326 | 10 | 326 | 9.76e-74 | 231 |
| MS.gene51331.t1 | AT1G77100 | 41.987 | 312 | 167 | 6 | 20 | 326 | 17 | 319 | 1.19e-73 | 230 |
| MS.gene51331.t1 | AT5G58400 | 41.083 | 314 | 176 | 5 | 12 | 322 | 14 | 321 | 1.21e-73 | 230 |
| MS.gene51331.t1 | AT2G22420 | 37.855 | 317 | 191 | 5 | 11 | 326 | 8 | 319 | 2.23e-73 | 229 |
| MS.gene51331.t1 | AT4G37520 | 40.523 | 306 | 177 | 2 | 25 | 326 | 25 | 329 | 2.85e-73 | 229 |
| MS.gene51331.t1 | AT4G26010 | 39.241 | 316 | 176 | 6 | 12 | 326 | 9 | 309 | 3.02e-73 | 229 |
| MS.gene51331.t1 | AT4G26010 | 39.241 | 316 | 176 | 6 | 12 | 326 | 37 | 337 | 5.99e-73 | 229 |
| MS.gene51331.t1 | AT3G49960 | 41.049 | 324 | 182 | 4 | 11 | 326 | 7 | 329 | 1.49e-72 | 228 |
| MS.gene51331.t1 | AT2G35380 | 40.000 | 330 | 176 | 5 | 11 | 326 | 14 | 335 | 3.39e-72 | 227 |
| MS.gene51331.t1 | AT5G64110 | 39.667 | 300 | 172 | 4 | 30 | 326 | 37 | 330 | 7.59e-72 | 226 |
| MS.gene51331.t1 | AT5G67400 | 40.777 | 309 | 178 | 2 | 22 | 326 | 22 | 329 | 1.93e-71 | 224 |
| MS.gene51331.t1 | AT4G33870 | 36.418 | 335 | 177 | 3 | 24 | 323 | 65 | 398 | 2.49e-71 | 227 |
| MS.gene51331.t1 | AT4G37520 | 40.523 | 306 | 174 | 3 | 25 | 326 | 25 | 326 | 4.10e-71 | 224 |
| MS.gene51331.t1 | AT4G17690 | 38.141 | 312 | 184 | 4 | 18 | 326 | 17 | 322 | 4.96e-70 | 221 |
| MS.gene51331.t1 | AT1G68850 | 38.411 | 302 | 180 | 4 | 31 | 326 | 34 | 335 | 9.89e-70 | 221 |
| MS.gene51331.t1 | AT4G30170 | 40.196 | 306 | 174 | 3 | 25 | 326 | 25 | 325 | 2.57e-69 | 219 |
| MS.gene51331.t1 | AT2G34060 | 39.474 | 304 | 179 | 3 | 24 | 322 | 39 | 342 | 4.27e-69 | 219 |
| MS.gene51331.t1 | AT5G22410 | 40.063 | 317 | 178 | 7 | 11 | 322 | 12 | 321 | 7.01e-69 | 218 |
| MS.gene51331.t1 | AT1G34510 | 37.654 | 324 | 184 | 7 | 4 | 326 | 3 | 309 | 1.08e-68 | 217 |
| MS.gene51331.t1 | AT5G58390 | 38.629 | 321 | 180 | 6 | 9 | 322 | 2 | 312 | 1.78e-68 | 217 |
| MS.gene51331.t1 | AT4G37530 | 43.346 | 263 | 144 | 2 | 20 | 278 | 20 | 281 | 1.82e-67 | 213 |
| MS.gene51331.t1 | AT1G30870 | 41.806 | 299 | 163 | 6 | 31 | 326 | 55 | 345 | 2.70e-67 | 214 |
| MS.gene51331.t1 | AT5G47000 | 37.538 | 325 | 186 | 7 | 11 | 326 | 14 | 330 | 9.79e-66 | 210 |
| MS.gene51331.t1 | AT4G21960 | 35.435 | 333 | 200 | 6 | 3 | 326 | 1 | 327 | 2.28e-65 | 209 |
| MS.gene51331.t1 | AT5G40150 | 37.134 | 307 | 186 | 2 | 22 | 326 | 27 | 328 | 2.81e-65 | 209 |
| MS.gene51331.t1 | AT1G24110 | 35.443 | 316 | 194 | 4 | 14 | 322 | 6 | 318 | 1.79e-63 | 204 |
| MS.gene51331.t1 | AT2G43480 | 36.943 | 314 | 187 | 4 | 19 | 326 | 27 | 335 | 2.36e-61 | 199 |
| MS.gene51331.t1 | AT3G28200 | 35.505 | 307 | 190 | 2 | 22 | 326 | 16 | 316 | 3.70e-61 | 198 |
| MS.gene51331.t1 | AT5G24070 | 34.897 | 341 | 199 | 6 | 3 | 326 | 1 | 335 | 5.34e-61 | 198 |
| MS.gene51331.t1 | AT2G37130 | 33.225 | 307 | 195 | 4 | 24 | 326 | 27 | 327 | 1.72e-53 | 178 |
| MS.gene51331.t1 | AT3G17070 | 32.628 | 331 | 199 | 7 | 7 | 322 | 14 | 335 | 7.06e-53 | 177 |
| MS.gene51331.t1 | AT2G37130 | 33.555 | 301 | 190 | 4 | 30 | 326 | 2 | 296 | 7.30e-53 | 176 |
| MS.gene51331.t1 | AT2G35380 | 38.735 | 253 | 133 | 5 | 88 | 326 | 3 | 247 | 1.54e-48 | 163 |
| MS.gene51331.t1 | AT5G39580 | 44.279 | 201 | 102 | 4 | 3 | 200 | 1 | 194 | 1.79e-48 | 162 |
| MS.gene51331.t1 | AT4G25980 | 45.665 | 173 | 91 | 2 | 21 | 193 | 65 | 234 | 3.25e-45 | 155 |
| MS.gene51331.t1 | AT2G24800 | 46.108 | 167 | 87 | 1 | 25 | 191 | 29 | 192 | 1.41e-43 | 150 |
| MS.gene51331.t1 | AT3G17070 | 30.824 | 279 | 172 | 7 | 55 | 322 | 4 | 272 | 5.83e-39 | 139 |
| MS.gene51331.t1 | AT3G42570 | 33.019 | 106 | 70 | 1 | 89 | 193 | 44 | 149 | 1.10e-13 | 68.2 |
Find 59 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGCCAATTACATGAAAA+TGG | 0.170365 | 4.1:+50753278 | None:intergenic |
| ATTTGTCTTATAGCAATAAT+TGG | 0.198586 | 4.1:+50753330 | MS.gene51331:CDS |
| AATGACCTAGTCTTGCTTTC+CGG | 0.250529 | 4.1:+50754532 | MS.gene51331:CDS |
| ATTTGCAGGGTGGGCCTTAT+TGG | 0.254925 | 4.1:+50754383 | MS.gene51331:intron |
| AAAACAATTTGTTCAGCTTT+GGG | 0.265521 | 4.1:-50753399 | None:intergenic |
| CAAAACAATTTGTTCAGCTT+TGG | 0.265636 | 4.1:-50753400 | None:intergenic |
| GCATATTCACCGTCTAGATC+TGG | 0.345112 | 4.1:-50755000 | None:intergenic |
| TAGCCTCGAAGTGTAAGATT+TGG | 0.347680 | 4.1:-50753827 | None:intergenic |
| GGAAGGTTCCAACAGGTAGA+AGG | 0.383934 | 4.1:+50754404 | MS.gene51331:CDS |
| GGGAGAATTAATGTCAAGAT+TGG | 0.389587 | 4.1:+50755264 | MS.gene51331:CDS |
| TCAAATGTATTACGACTTCC+AGG | 0.390217 | 4.1:-50755087 | None:intergenic |
| TCAAACCACACTTATTGAAA+TGG | 0.390578 | 4.1:+50755062 | MS.gene51331:CDS |
| AGTCGTAATACATTTGATCT+TGG | 0.396009 | 4.1:+50755093 | MS.gene51331:CDS |
| ACTGTCCTCCTAACACTCTT+TGG | 0.396163 | 4.1:+50754490 | MS.gene51331:CDS |
| CAACATTGCCAAAGAGTGTT+AGG | 0.396433 | 4.1:-50754498 | None:intergenic |
| TAAGCAATGCAGCATCTGAT+TGG | 0.403489 | 4.1:-50755152 | None:intergenic |
| ATTTCAGGTGCACACACAAT+TGG | 0.433140 | 4.1:+50754913 | MS.gene51331:intron |
| CTAACACTCTTTGGCAATGT+TGG | 0.442479 | 4.1:+50754499 | MS.gene51331:CDS |
| ACAAACCAATCAAGCTGAAA+AGG | 0.448336 | 4.1:+50753796 | MS.gene51331:CDS |
| TTAAAACCTTGAAGTAACTC+TGG | 0.458221 | 4.1:-50753305 | None:intergenic |
| CCTGTTGGAACCTTCCAATA+AGG | 0.463341 | 4.1:-50754397 | None:intergenic |
| GGGAATCCAGAGTTACTTCA+AGG | 0.464095 | 4.1:+50753299 | MS.gene51331:CDS |
| ATTCCAAATCTTACACTTCG+AGG | 0.467504 | 4.1:+50753824 | MS.gene51331:CDS |
| TCTGCCAATTACATGAAAAT+GGG | 0.474216 | 4.1:+50753279 | None:intergenic |
| GCAGGGTGGGCCTTATTGGA+AGG | 0.485522 | 4.1:+50754387 | MS.gene51331:intron |
| CAAGCAAGTAGTTAAGAGAA+GGG | 0.488778 | 4.1:+50755122 | MS.gene51331:CDS |
| TCAAGCAAGTAGTTAAGAGA+AGG | 0.493471 | 4.1:+50755121 | MS.gene51331:CDS |
| CATATTCACCGTCTAGATCT+GGG | 0.504303 | 4.1:-50754999 | None:intergenic |
| CCTTATTGGAAGGTTCCAAC+AGG | 0.506222 | 4.1:+50754397 | MS.gene51331:CDS |
| AGGACAGTGAGGTTGTGAAA+TGG | 0.507765 | 4.1:-50754475 | None:intergenic |
| TGTTGAAATTGATGAGCAAT+GGG | 0.507805 | 4.1:-50754941 | None:intergenic |
| TAATGAATTTGGCAAGTCCA+TGG | 0.508920 | 4.1:+50755233 | MS.gene51331:CDS |
| GGAGAATTAATGTCAAGATT+GGG | 0.509355 | 4.1:+50755265 | MS.gene51331:CDS |
| ATACCTTGACAAAACAATCA+TGG | 0.512809 | 4.1:-50753488 | None:intergenic |
| AGCTGCTAGTGATGGTACAC+TGG | 0.519920 | 4.1:-50753445 | None:intergenic |
| ACTCCATCCCTTCTACCTGT+TGG | 0.547709 | 4.1:-50754412 | None:intergenic |
| GTGAGGTTGTGAAATGGAGC+AGG | 0.547960 | 4.1:-50754469 | None:intergenic |
| GAAGGTTCCAACAGGTAGAA+GGG | 0.566125 | 4.1:+50754405 | MS.gene51331:CDS |
| ACTCATGCTCAATTGCAGCC+AGG | 0.571279 | 4.1:+50753357 | MS.gene51331:CDS |
| TTGTTGAAATTGATGAGCAA+TGG | 0.572249 | 4.1:-50754942 | None:intergenic |
| GTTCCAACAGGTAGAAGGGA+TGG | 0.572964 | 4.1:+50754409 | MS.gene51331:CDS |
| AGGGTCCATTTCAATAAGTG+TGG | 0.580715 | 4.1:-50755067 | None:intergenic |
| AATGTCAAGATTGGGACTGA+GGG | 0.584429 | 4.1:+50755273 | MS.gene51331:CDS |
| ACACTTATTGAAATGGACCC+TGG | 0.584876 | 4.1:+50755069 | MS.gene51331:CDS |
| AAGCAAGTAGTTAAGAGAAG+GGG | 0.586770 | 4.1:+50755123 | MS.gene51331:CDS |
| TCAGCACAAGAGACAACACC+AGG | 0.593653 | 4.1:-50753893 | None:intergenic |
| AAACAATTTGTTCAGCTTTG+GGG | 0.596812 | 4.1:-50753398 | None:intergenic |
| TAATGTCAAGATTGGGACTG+AGG | 0.599035 | 4.1:+50755272 | MS.gene51331:CDS |
| ATTTCAGGGATGTGATGCAT+CGG | 0.627600 | 4.1:+50753757 | MS.gene51331:intron |
| GCATACCGGAAAGCAAGACT+AGG | 0.630686 | 4.1:-50754537 | None:intergenic |
| ATGAGTGCAGCTGCTAGTGA+TGG | 0.632678 | 4.1:-50753453 | None:intergenic |
| GATCAAGACCCAGATCTAGA+CGG | 0.657297 | 4.1:+50754991 | MS.gene51331:CDS |
| GGTTGTGAAATGGAGCAGGA+AGG | 0.663275 | 4.1:-50754465 | None:intergenic |
| CATTGCCAAAGAGTGTTAGG+AGG | 0.665435 | 4.1:-50754495 | None:intergenic |
| GCTGCTAGTGATGGTACACT+GGG | 0.680818 | 4.1:-50753444 | None:intergenic |
| AGAGTGTTAGGAGGACAGTG+AGG | 0.689613 | 4.1:-50754486 | None:intergenic |
| CAAATGTATTACGACTTCCA+GGG | 0.691933 | 4.1:-50755086 | None:intergenic |
| ATTGCTCATCAATTTCAACA+AGG | 0.726588 | 4.1:+50754944 | MS.gene51331:CDS |
| CAGCACAAGAGACAACACCA+GGG | 0.782900 | 4.1:-50753892 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAGATAAATAATGTTATT+TGG | + | chr4.1:50754195-50754214 | MS.gene51331:intron | 10.0% |
| !! | TAATTTAAGAAAATAAAAGT+AGG | + | chr4.1:50754730-50754749 | MS.gene51331:intron | 10.0% |
| !!! | TTACTTTTTTTTAAAAAACT+CGG | - | chr4.1:50754777-50754796 | None:intergenic | 10.0% |
| !! | GAAAAATTCTTTAATGAATT+TGG | + | chr4.1:50755222-50755241 | MS.gene51331:CDS | 15.0% |
| !! | GTTTAGTATGTATAATTATT+TGG | + | chr4.1:50754306-50754325 | MS.gene51331:intron | 15.0% |
| !!! | CAAAACACTTTAAAATATTT+TGG | + | chr4.1:50754044-50754063 | MS.gene51331:intron | 15.0% |
| !!! | CAAAATATTTTAAAGTGTTT+TGG | - | chr4.1:50754046-50754065 | None:intergenic | 15.0% |
| !!! | GTATAATTATTTGGTTTTAT+AGG | + | chr4.1:50754315-50754334 | MS.gene51331:intron | 15.0% |
| !! | ATTTGTCTTATAGCAATAAT+TGG | + | chr4.1:50753330-50753349 | MS.gene51331:CDS | 20.0% |
| !! | CTGATATGCTATATATATTT+GGG | + | chr4.1:50754134-50754153 | MS.gene51331:intron | 20.0% |
| !! | TCTGATATGCTATATATATT+TGG | + | chr4.1:50754133-50754152 | MS.gene51331:intron | 20.0% |
| !!! | AATATTTTAAAGTGTTTTGG+AGG | - | chr4.1:50754043-50754062 | None:intergenic | 20.0% |
| !!! | ATATTTTGGATTTTTGAATC+TGG | + | chr4.1:50754058-50754077 | MS.gene51331:intron | 20.0% |
| !!! | TATTTTGGATTTTTGAATCT+GGG | + | chr4.1:50754059-50754078 | MS.gene51331:intron | 20.0% |
| ! | AATAAAAAAAGCAGTCAGAT+GGG | - | chr4.1:50754623-50754642 | None:intergenic | 25.0% |
| ! | ACCAAAACTATCATTATTTC+AGG | + | chr4.1:50754898-50754917 | MS.gene51331:intron | 25.0% |
| ! | TTGCACTAACATATGTATTT+CGG | + | chr4.1:50754641-50754660 | MS.gene51331:intron | 25.0% |
| !! | AAAACAATTTGTTCAGCTTT+GGG | - | chr4.1:50753402-50753421 | None:intergenic | 25.0% |
| !! | ACAAGGCTATATAATTTTAC+TGG | + | chr4.1:50754961-50754980 | MS.gene51331:CDS | 25.0% |
| !! | ACCTGAAATAATGATAGTTT+TGG | - | chr4.1:50754902-50754921 | None:intergenic | 25.0% |
| !! | CTATATAATTTTACTGGCAA+GGG | + | chr4.1:50754967-50754986 | MS.gene51331:CDS | 25.0% |
| !! | TAATGTTATTTGGTTATGCA+TGG | + | chr4.1:50754205-50754224 | MS.gene51331:intron | 25.0% |
| !!! | TTTAGTTTGTGTGTAGAATT+TGG | - | chr4.1:50754562-50754581 | None:intergenic | 25.0% |
| AAATGACCATTTGTTTGTTC+TGG | + | chr4.1:50754346-50754365 | MS.gene51331:intron | 30.0% | |
| AGTCGTAATACATTTGATCT+TGG | + | chr4.1:50755093-50755112 | MS.gene51331:CDS | 30.0% | |
| ATACCTTGACAAAACAATCA+TGG | - | chr4.1:50753491-50753510 | None:intergenic | 30.0% | |
| ATTGCTCATCAATTTCAACA+AGG | + | chr4.1:50754944-50754963 | MS.gene51331:CDS | 30.0% | |
| CAATAAAAAAAGCAGTCAGA+TGG | - | chr4.1:50754624-50754643 | None:intergenic | 30.0% | |
| GGAGAATTAATGTCAAGATT+GGG | + | chr4.1:50755265-50755284 | MS.gene51331:CDS | 30.0% | |
| TCAAACCACACTTATTGAAA+TGG | + | chr4.1:50755062-50755081 | MS.gene51331:CDS | 30.0% | |
| TGTTGAAATTGATGAGCAAT+GGG | - | chr4.1:50754944-50754963 | None:intergenic | 30.0% | |
| TTAAAACCTTGAAGTAACTC+TGG | - | chr4.1:50753308-50753327 | None:intergenic | 30.0% | |
| TTGTTGAAATTGATGAGCAA+TGG | - | chr4.1:50754945-50754964 | None:intergenic | 30.0% | |
| ! | AAACAATTTGTTCAGCTTTG+GGG | - | chr4.1:50753401-50753420 | None:intergenic | 30.0% |
| ! | CAAAACAATTTGTTCAGCTT+TGG | - | chr4.1:50753403-50753422 | None:intergenic | 30.0% |
| ! | GCTATATAATTTTACTGGCA+AGG | + | chr4.1:50754966-50754985 | MS.gene51331:CDS | 30.0% |
| ! | GTCAATATTTAAAACTGACG+TGG | + | chr4.1:50754813-50754832 | MS.gene51331:intron | 30.0% |
| !! | CTAGCATCGACATATTAATA+CGG | - | chr4.1:50753580-50753599 | None:intergenic | 30.0% |
| !! | TAGCATCGACATATTAATAC+GGG | - | chr4.1:50753579-50753598 | None:intergenic | 30.0% |
| !! | TTTAAAAAAAAGCACCGTCA+CGG | + | chr4.1:50754665-50754684 | MS.gene51331:intron | 30.0% |
| !! | TTTCCATGATTGTTTTGTCA+AGG | + | chr4.1:50753485-50753504 | MS.gene51331:CDS | 30.0% |
| !!! | AGTGTTTTGGAGGTTTTTAT+AGG | - | chr4.1:50754033-50754052 | None:intergenic | 30.0% |
| !!! | GTGTTTTGGAGGTTTTTATA+GGG | - | chr4.1:50754032-50754051 | None:intergenic | 30.0% |
| AACTAACATCTGGCATTTCA+GGG | + | chr4.1:50753743-50753762 | MS.gene51331:intron | 35.0% | |
| AAGCAAGTAGTTAAGAGAAG+GGG | + | chr4.1:50755123-50755142 | MS.gene51331:CDS | 35.0% | |
| ACAAACCAATCAAGCTGAAA+AGG | + | chr4.1:50753796-50753815 | MS.gene51331:CDS | 35.0% | |
| ATCATGCCAGAACAAACAAA+TGG | - | chr4.1:50754355-50754374 | None:intergenic | 35.0% | |
| ATGATTGACATGGATTTGCA+GGG | + | chr4.1:50754370-50754389 | MS.gene51331:intron | 35.0% | |
| ATTCCAAATCTTACACTTCG+AGG | + | chr4.1:50753824-50753843 | MS.gene51331:CDS | 35.0% | |
| CAAATGTATTACGACTTCCA+GGG | - | chr4.1:50755089-50755108 | None:intergenic | 35.0% | |
| CAAGCAAGTAGTTAAGAGAA+GGG | + | chr4.1:50755122-50755141 | MS.gene51331:CDS | 35.0% | |
| CTGTACGCTAGTAATGATAA+TGG | - | chr4.1:50754587-50754606 | None:intergenic | 35.0% | |
| GGGAGAATTAATGTCAAGAT+TGG | + | chr4.1:50755264-50755283 | MS.gene51331:CDS | 35.0% | |
| TAATGAATTTGGCAAGTCCA+TGG | + | chr4.1:50755233-50755252 | MS.gene51331:CDS | 35.0% | |
| TCAAATGTATTACGACTTCC+AGG | - | chr4.1:50755090-50755109 | None:intergenic | 35.0% | |
| TCAAGCAAGTAGTTAAGAGA+AGG | + | chr4.1:50755121-50755140 | MS.gene51331:CDS | 35.0% | |
| TTGAATGAAATCACGTGTGT+TGG | + | chr4.1:50753622-50753641 | MS.gene51331:intron | 35.0% | |
| ! | ATGTCTTCTATCTGAAGTGT+CGG | + | chr4.1:50754846-50754865 | MS.gene51331:intron | 35.0% |
| ! | GGTTTTTATAGGGTGAGAAA+AGG | - | chr4.1:50754022-50754041 | None:intergenic | 35.0% |
| ! | TGGATTTTTGAATCTGGGTT+GGG | + | chr4.1:50754064-50754083 | MS.gene51331:intron | 35.0% |
| ! | TTGGATTTTTGAATCTGGGT+TGG | + | chr4.1:50754063-50754082 | MS.gene51331:intron | 35.0% |
| !!! | AATTCTCCCCATTTTTTCCA+TGG | - | chr4.1:50755253-50755272 | None:intergenic | 35.0% |
| AATGTCAAGATTGGGACTGA+GGG | + | chr4.1:50755273-50755292 | MS.gene51331:CDS | 40.0% | |
| ACACTTATTGAAATGGACCC+TGG | + | chr4.1:50755069-50755088 | MS.gene51331:CDS | 40.0% | |
| AGGGTCCATTTCAATAAGTG+TGG | - | chr4.1:50755070-50755089 | None:intergenic | 40.0% | |
| ATTTCAGGGATGTGATGCAT+CGG | + | chr4.1:50753757-50753776 | MS.gene51331:intron | 40.0% | |
| CATATTCACCGTCTAGATCT+GGG | - | chr4.1:50755002-50755021 | None:intergenic | 40.0% | |
| CATGATTGACATGGATTTGC+AGG | + | chr4.1:50754369-50754388 | MS.gene51331:intron | 40.0% | |
| CTAACACTCTTTGGCAATGT+TGG | + | chr4.1:50754499-50754518 | MS.gene51331:CDS | 40.0% | |
| CTTGTTGAAAAAGAATGCCC+TGG | + | chr4.1:50753875-50753894 | MS.gene51331:CDS | 40.0% | |
| GAACTAACATCTGGCATTTC+AGG | + | chr4.1:50753742-50753761 | MS.gene51331:intron | 40.0% | |
| GCAAGTCCATGGAAAAAATG+GGG | + | chr4.1:50755244-50755263 | MS.gene51331:CDS | 40.0% | |
| GGCAAGTCCATGGAAAAAAT+GGG | + | chr4.1:50755243-50755262 | MS.gene51331:CDS | 40.0% | |
| GTGAATGTCGAACTAACATC+TGG | + | chr4.1:50753733-50753752 | MS.gene51331:intron | 40.0% | |
| GTGTGTAGAATTTGGCATAC+CGG | - | chr4.1:50754554-50754573 | None:intergenic | 40.0% | |
| TAAGCAATGCAGCATCTGAT+TGG | - | chr4.1:50755155-50755174 | None:intergenic | 40.0% | |
| TAATGTCAAGATTGGGACTG+AGG | + | chr4.1:50755272-50755291 | MS.gene51331:CDS | 40.0% | |
| TAGCCTCGAAGTGTAAGATT+TGG | - | chr4.1:50753830-50753849 | None:intergenic | 40.0% | |
| TGGCAAGTCCATGGAAAAAA+TGG | + | chr4.1:50755242-50755261 | MS.gene51331:CDS | 40.0% | |
| TTGTTCTGGCATGATTGACA+TGG | + | chr4.1:50754360-50754379 | MS.gene51331:intron | 40.0% | |
| ! | AGCATCCTTTTCAGCTTGAT+TGG | - | chr4.1:50753804-50753823 | None:intergenic | 40.0% |
| ! | ATTTCAGGTGCACACACAAT+TGG | + | chr4.1:50754913-50754932 | MS.gene51331:intron | 40.0% |
| ! | CAGCTTTTAGCATAGAAACC+TGG | - | chr4.1:50753378-50753397 | None:intergenic | 40.0% |
| ! | GTTGTATTTGATGACCGTGA+CGG | - | chr4.1:50754682-50754701 | None:intergenic | 40.0% |
| !! | AATGACCTAGTCTTGCTTTC+CGG | + | chr4.1:50754532-50754551 | MS.gene51331:CDS | 40.0% |
| !! | CAACATTGCCAAAGAGTGTT+AGG | - | chr4.1:50754501-50754520 | None:intergenic | 40.0% |
| !!! | CAGGGCATTCTTTTTCAACA+AGG | - | chr4.1:50753877-50753896 | None:intergenic | 40.0% |
| ACTGTCCTCCTAACACTCTT+TGG | + | chr4.1:50754490-50754509 | MS.gene51331:CDS | 45.0% | |
| AGGACAGTGAGGTTGTGAAA+TGG | - | chr4.1:50754478-50754497 | None:intergenic | 45.0% | |
| ATTGACATGGATTTGCAGGG+TGG | + | chr4.1:50754373-50754392 | MS.gene51331:intron | 45.0% | |
| CCTGTTGGAACCTTCCAATA+AGG | - | chr4.1:50754400-50754419 | None:intergenic | 45.0% | |
| CCTTATTGGAAGGTTCCAAC+AGG | + | chr4.1:50754397-50754416 | MS.gene51331:CDS | 45.0% | |
| CTTCTGATGAAAGACGTGTC+TGG | - | chr4.1:50753669-50753688 | None:intergenic | 45.0% | |
| GAAGGTTCCAACAGGTAGAA+GGG | + | chr4.1:50754405-50754424 | MS.gene51331:CDS | 45.0% | |
| GATCAAGACCCAGATCTAGA+CGG | + | chr4.1:50754991-50755010 | MS.gene51331:CDS | 45.0% | |
| GCATATTCACCGTCTAGATC+TGG | - | chr4.1:50755003-50755022 | None:intergenic | 45.0% | |
| GGGAATCCAGAGTTACTTCA+AGG | + | chr4.1:50753299-50753318 | MS.gene51331:CDS | 45.0% | |
| TTGACATGGATTTGCAGGGT+GGG | + | chr4.1:50754374-50754393 | MS.gene51331:intron | 45.0% | |
| !! | CATTGCCAAAGAGTGTTAGG+AGG | - | chr4.1:50754498-50754517 | None:intergenic | 45.0% |
| !!! | TTATTTTCTTAAATTAATAT+TGG | - | chr4.1:50754726-50754745 | None:intergenic | 5.0% |
| ACTCATGCTCAATTGCAGCC+AGG | + | chr4.1:50753357-50753376 | MS.gene51331:CDS | 50.0% | |
| ACTCCATCCCTTCTACCTGT+TGG | - | chr4.1:50754415-50754434 | None:intergenic | 50.0% | |
| AGCTGCTAGTGATGGTACAC+TGG | - | chr4.1:50753448-50753467 | None:intergenic | 50.0% | |
| ATGAGTGCAGCTGCTAGTGA+TGG | - | chr4.1:50753456-50753475 | None:intergenic | 50.0% | |
| CAGCACAAGAGACAACACCA+GGG | - | chr4.1:50753895-50753914 | None:intergenic | 50.0% | |
| GACGTGTCTGGTGTCTAACA+TGG | - | chr4.1:50753657-50753676 | None:intergenic | 50.0% | |
| GCATACCGGAAAGCAAGACT+AGG | - | chr4.1:50754540-50754559 | None:intergenic | 50.0% | |
| GCTGCTAGTGATGGTACACT+GGG | - | chr4.1:50753447-50753466 | None:intergenic | 50.0% | |
| GGAAGGTTCCAACAGGTAGA+AGG | + | chr4.1:50754404-50754423 | MS.gene51331:CDS | 50.0% | |
| GGGCGTGCGAGAAATTCATA+GGG | + | chr4.1:50754084-50754103 | MS.gene51331:intron | 50.0% | |
| GGTTGTGAAATGGAGCAGGA+AGG | - | chr4.1:50754468-50754487 | None:intergenic | 50.0% | |
| GTGAGGTTGTGAAATGGAGC+AGG | - | chr4.1:50754472-50754491 | None:intergenic | 50.0% | |
| GTTCCAACAGGTAGAAGGGA+TGG | + | chr4.1:50754409-50754428 | MS.gene51331:CDS | 50.0% | |
| TCAGCACAAGAGACAACACC+AGG | - | chr4.1:50753896-50753915 | None:intergenic | 50.0% | |
| TGGGCGTGCGAGAAATTCAT+AGG | + | chr4.1:50754083-50754102 | MS.gene51331:intron | 50.0% | |
| ! | AGAGTGTTAGGAGGACAGTG+AGG | - | chr4.1:50754489-50754508 | None:intergenic | 50.0% |
| ! | ATTTGCAGGGTGGGCCTTAT+TGG | + | chr4.1:50754383-50754402 | MS.gene51331:intron | 50.0% |
| !! | GCAGGGTGGGCCTTATTGGA+AGG | + | chr4.1:50754387-50754406 | MS.gene51331:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 50753291 | 50755329 | 50753291 | ID=MS.gene51331 |
| chr4.1 | mRNA | 50753291 | 50755329 | 50753291 | ID=MS.gene51331.t1;Parent=MS.gene51331 |
| chr4.1 | exon | 50753291 | 50753506 | 50753291 | ID=MS.gene51331.t1.exon1;Parent=MS.gene51331.t1 |
| chr4.1 | CDS | 50753291 | 50753506 | 50753291 | ID=cds.MS.gene51331.t1;Parent=MS.gene51331.t1 |
| chr4.1 | exon | 50753764 | 50753955 | 50753764 | ID=MS.gene51331.t1.exon2;Parent=MS.gene51331.t1 |
| chr4.1 | CDS | 50753764 | 50753955 | 50753764 | ID=cds.MS.gene51331.t1;Parent=MS.gene51331.t1 |
| chr4.1 | exon | 50754391 | 50754553 | 50754391 | ID=MS.gene51331.t1.exon3;Parent=MS.gene51331.t1 |
| chr4.1 | CDS | 50754391 | 50754553 | 50754391 | ID=cds.MS.gene51331.t1;Parent=MS.gene51331.t1 |
| chr4.1 | exon | 50754920 | 50755329 | 50754920 | ID=MS.gene51331.t1.exon4;Parent=MS.gene51331.t1 |
| chr4.1 | CDS | 50754920 | 50755329 | 50754920 | ID=cds.MS.gene51331.t1;Parent=MS.gene51331.t1 |
| Gene Sequence |
| Protein sequence |
