Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32715.t1 | AES73524.2 | 97.2 | 318 | 9 | 0 | 1 | 318 | 7 | 324 | 2.50E-171 | 611.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32715.t1 | Q9SK52 | 64.5 | 301 | 106 | 1 | 17 | 316 | 29 | 329 | 2.7e-113 | 409.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32715.t1 | G7J983 | 97.2 | 318 | 9 | 0 | 1 | 318 | 7 | 324 | 1.8e-171 | 611.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050689 | MS.gene32715 | 0.817097 | 3.93E-52 | -1.69E-46 |
MS.gene050807 | MS.gene32715 | 0.808731 | 2.68E-50 | -1.69E-46 |
MS.gene052665 | MS.gene32715 | 0.809484 | 1.85E-50 | -1.69E-46 |
MS.gene053563 | MS.gene32715 | 0.817261 | 3.61E-52 | -1.69E-46 |
MS.gene056760 | MS.gene32715 | 0.802096 | 6.60E-49 | -1.69E-46 |
MS.gene058646 | MS.gene32715 | 0.801298 | 9.62E-49 | -1.69E-46 |
MS.gene059725 | MS.gene32715 | 0.800619 | 1.32E-48 | -1.69E-46 |
MS.gene05978 | MS.gene32715 | 0.813754 | 2.18E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene014836 | MS.gene32715 | PPI |
MS.gene87222 | MS.gene32715 | PPI |
MS.gene32715 | MS.gene35931 | PPI |
MS.gene32715 | MS.gene88144 | PPI |
MS.gene32715 | MS.gene038655 | PPI |
MS.gene48733 | MS.gene32715 | PPI |
MS.gene67066 | MS.gene32715 | PPI |
MS.gene32715 | MS.gene32635 | PPI |
MS.gene32715 | MS.gene48746 | PPI |
MS.gene32715 | MS.gene027436 | PPI |
MS.gene32715 | MS.gene88044 | PPI |
MS.gene32715 | MS.gene35853 | PPI |
MS.gene32715 | MS.gene015231 | PPI |
MS.gene35931 | MS.gene32715 | PPI |
MS.gene32715 | MS.gene067613 | PPI |
MS.gene51331 | MS.gene32715 | PPI |
MS.gene32715 | MS.gene029047 | PPI |
MS.gene043054 | MS.gene32715 | PPI |
MS.gene32715 | MS.gene57204 | PPI |
MS.gene32715 | MS.gene45786 | PPI |
MS.gene32715 | MS.gene20276 | PPI |
MS.gene32715 | MS.gene09575 | PPI |
MS.gene32715 | MS.gene071108 | PPI |
MS.gene32715 | MS.gene043043 | PPI |
MS.gene32715 | MS.gene072888 | PPI |
MS.gene71470 | MS.gene32715 | PPI |
MS.gene029047 | MS.gene32715 | PPI |
MS.gene32715 | MS.gene35795 | PPI |
MS.gene32715 | MS.gene44482 | PPI |
MS.gene69473 | MS.gene32715 | PPI |
MS.gene32715 | MS.gene009198 | PPI |
MS.gene32715 | MS.gene48740 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32715.t1 | MTR_3g105790 | 97.170 | 318 | 9 | 0 | 1 | 318 | 7 | 324 | 0.0 | 638 |
MS.gene32715.t1 | MTR_3g105790 | 97.984 | 248 | 5 | 0 | 71 | 318 | 1 | 248 | 0.0 | 504 |
MS.gene32715.t1 | MTR_7g029030 | 41.875 | 320 | 174 | 3 | 1 | 316 | 9 | 320 | 3.23e-87 | 265 |
MS.gene32715.t1 | MTR_5g022870 | 40.705 | 312 | 173 | 6 | 9 | 316 | 13 | 316 | 1.01e-79 | 245 |
MS.gene32715.t1 | MTR_2g008710 | 42.991 | 321 | 174 | 4 | 1 | 316 | 9 | 325 | 1.07e-78 | 243 |
MS.gene32715.t1 | MTR_8g075100 | 40.850 | 306 | 171 | 4 | 14 | 316 | 21 | 319 | 7.42e-78 | 240 |
MS.gene32715.t1 | MTR_1g025980 | 39.048 | 315 | 182 | 5 | 1 | 312 | 7 | 314 | 1.37e-76 | 237 |
MS.gene32715.t1 | MTR_1g101830 | 40.063 | 317 | 180 | 5 | 3 | 316 | 13 | 322 | 3.16e-76 | 236 |
MS.gene32715.t1 | MTR_1g009750 | 39.692 | 325 | 184 | 5 | 2 | 316 | 6 | 328 | 1.09e-75 | 235 |
MS.gene32715.t1 | MTR_3g092990 | 39.498 | 319 | 186 | 4 | 3 | 316 | 10 | 326 | 4.38e-75 | 234 |
MS.gene32715.t1 | MTR_2g084080 | 39.130 | 322 | 181 | 3 | 1 | 316 | 5 | 317 | 5.76e-74 | 230 |
MS.gene32715.t1 | MTR_5g021060 | 41.667 | 300 | 166 | 4 | 23 | 316 | 34 | 330 | 2.34e-73 | 229 |
MS.gene32715.t1 | MTR_7g107520 | 40.994 | 322 | 178 | 6 | 1 | 316 | 5 | 320 | 9.12e-73 | 228 |
MS.gene32715.t1 | MTR_5g014100 | 40.850 | 306 | 173 | 4 | 19 | 316 | 26 | 331 | 3.84e-72 | 226 |
MS.gene32715.t1 | MTR_4g095450 | 40.132 | 304 | 168 | 5 | 17 | 313 | 25 | 321 | 7.70e-72 | 225 |
MS.gene32715.t1 | MTR_7g086820 | 39.869 | 306 | 167 | 6 | 17 | 316 | 18 | 312 | 1.29e-71 | 224 |
MS.gene32715.t1 | MTR_2g084090 | 38.629 | 321 | 181 | 4 | 3 | 316 | 7 | 318 | 1.64e-71 | 224 |
MS.gene32715.t1 | MTR_5g017860 | 40.373 | 322 | 182 | 6 | 1 | 316 | 9 | 326 | 2.59e-71 | 224 |
MS.gene32715.t1 | MTR_4g046713 | 38.801 | 317 | 172 | 5 | 12 | 316 | 20 | 326 | 3.21e-71 | 224 |
MS.gene32715.t1 | MTR_7g086870 | 39.404 | 302 | 169 | 4 | 18 | 316 | 21 | 311 | 4.52e-71 | 223 |
MS.gene32715.t1 | MTR_5g017850 | 39.875 | 321 | 185 | 5 | 1 | 316 | 9 | 326 | 6.55e-71 | 223 |
MS.gene32715.t1 | MTR_2g099175 | 39.748 | 317 | 181 | 5 | 6 | 316 | 23 | 335 | 1.02e-70 | 223 |
MS.gene32715.t1 | MTR_2g084110 | 38.438 | 320 | 182 | 3 | 3 | 316 | 7 | 317 | 1.29e-70 | 222 |
MS.gene32715.t1 | MTR_2g088770 | 40.260 | 308 | 178 | 4 | 13 | 316 | 20 | 325 | 3.38e-70 | 221 |
MS.gene32715.t1 | MTR_8g076820 | 39.869 | 306 | 175 | 4 | 17 | 316 | 28 | 330 | 5.63e-70 | 221 |
MS.gene32715.t1 | MTR_5g016010 | 37.618 | 319 | 189 | 5 | 2 | 313 | 11 | 326 | 5.96e-70 | 221 |
MS.gene32715.t1 | MTR_4g087965 | 38.390 | 323 | 162 | 6 | 13 | 313 | 36 | 343 | 9.51e-70 | 221 |
MS.gene32715.t1 | MTR_4g125940 | 38.957 | 326 | 182 | 7 | 2 | 316 | 10 | 329 | 1.21e-69 | 220 |
MS.gene32715.t1 | MTR_4g127670 | 40.268 | 298 | 172 | 3 | 23 | 316 | 28 | 323 | 3.16e-69 | 218 |
MS.gene32715.t1 | MTR_2g028980 | 38.957 | 326 | 183 | 6 | 2 | 316 | 10 | 330 | 5.09e-69 | 219 |
MS.gene32715.t1 | MTR_4g114210 | 40.193 | 311 | 172 | 5 | 14 | 316 | 16 | 320 | 6.78e-69 | 218 |
MS.gene32715.t1 | MTR_2g029860 | 39.441 | 322 | 183 | 5 | 1 | 316 | 15 | 330 | 1.70e-68 | 218 |
MS.gene32715.t1 | MTR_1g086320 | 38.650 | 326 | 181 | 7 | 5 | 316 | 13 | 333 | 3.73e-68 | 216 |
MS.gene32715.t1 | MTR_2g029820 | 39.482 | 309 | 177 | 5 | 16 | 316 | 24 | 330 | 4.94e-68 | 216 |
MS.gene32715.t1 | MTR_3g072190 | 37.812 | 320 | 186 | 2 | 1 | 316 | 8 | 318 | 1.00e-67 | 214 |
MS.gene32715.t1 | MTR_4g122640 | 39.672 | 305 | 175 | 3 | 17 | 316 | 36 | 336 | 1.03e-67 | 215 |
MS.gene32715.t1 | MTR_2g029815 | 38.558 | 319 | 184 | 5 | 7 | 316 | 15 | 330 | 1.19e-67 | 215 |
MS.gene32715.t1 | MTR_2g029560 | 39.739 | 307 | 175 | 4 | 17 | 316 | 22 | 325 | 1.52e-67 | 215 |
MS.gene32715.t1 | MTR_2g029830 | 39.088 | 307 | 177 | 4 | 17 | 316 | 26 | 329 | 1.76e-67 | 215 |
MS.gene32715.t1 | MTR_1g054205 | 40.397 | 302 | 169 | 5 | 23 | 316 | 28 | 326 | 2.35e-67 | 214 |
MS.gene32715.t1 | MTR_5g074970 | 36.000 | 325 | 189 | 5 | 1 | 316 | 12 | 326 | 3.49e-67 | 213 |
MS.gene32715.t1 | MTR_2g029750 | 39.032 | 310 | 179 | 4 | 14 | 316 | 24 | 330 | 4.32e-67 | 214 |
MS.gene32715.t1 | MTR_3g094650 | 38.080 | 323 | 179 | 6 | 1 | 316 | 14 | 322 | 1.45e-66 | 211 |
MS.gene32715.t1 | MTR_1g077000 | 38.487 | 304 | 166 | 6 | 19 | 316 | 39 | 327 | 1.75e-66 | 211 |
MS.gene32715.t1 | MTR_2g084000 | 36.646 | 322 | 187 | 4 | 3 | 316 | 7 | 319 | 3.92e-66 | 210 |
MS.gene32715.t1 | MTR_2g084010 | 36.760 | 321 | 187 | 4 | 3 | 316 | 7 | 318 | 4.52e-66 | 210 |
MS.gene32715.t1 | MTR_1g038680 | 39.935 | 308 | 163 | 9 | 23 | 316 | 33 | 332 | 6.01e-66 | 210 |
MS.gene32715.t1 | MTR_2g084020 | 36.760 | 321 | 187 | 4 | 3 | 316 | 7 | 318 | 6.96e-66 | 210 |
MS.gene32715.t1 | MTR_2g029800 | 38.667 | 300 | 176 | 3 | 23 | 316 | 33 | 330 | 1.21e-65 | 210 |
MS.gene32715.t1 | MTR_2g029850 | 39.482 | 309 | 177 | 5 | 16 | 316 | 24 | 330 | 2.29e-65 | 209 |
MS.gene32715.t1 | MTR_7g093370 | 38.689 | 305 | 178 | 5 | 19 | 316 | 69 | 371 | 2.38e-65 | 210 |
MS.gene32715.t1 | MTR_6g027440 | 37.500 | 320 | 190 | 6 | 1 | 317 | 3 | 315 | 2.67e-65 | 208 |
MS.gene32715.t1 | MTR_6g043280 | 36.050 | 319 | 190 | 5 | 2 | 316 | 24 | 332 | 5.97e-65 | 208 |
MS.gene32715.t1 | MTR_5g083860 | 35.913 | 323 | 190 | 4 | 1 | 316 | 13 | 325 | 1.16e-64 | 207 |
MS.gene32715.t1 | MTR_1g086490 | 36.747 | 332 | 190 | 7 | 5 | 318 | 13 | 342 | 1.20e-64 | 207 |
MS.gene32715.t1 | MTR_2g029740 | 37.578 | 322 | 191 | 4 | 3 | 316 | 11 | 330 | 1.30e-64 | 207 |
MS.gene32715.t1 | MTR_3g092990 | 37.304 | 319 | 182 | 5 | 3 | 316 | 10 | 315 | 3.36e-64 | 205 |
MS.gene32715.t1 | MTR_3g466200 | 34.675 | 323 | 188 | 5 | 1 | 316 | 14 | 320 | 3.38e-64 | 206 |
MS.gene32715.t1 | MTR_1g009750 | 36.842 | 323 | 179 | 6 | 2 | 316 | 6 | 311 | 4.15e-64 | 205 |
MS.gene32715.t1 | MTR_4g029190 | 37.179 | 312 | 180 | 4 | 12 | 316 | 38 | 340 | 9.41e-64 | 205 |
MS.gene32715.t1 | MTR_4g132490 | 36.393 | 305 | 181 | 5 | 19 | 316 | 29 | 327 | 9.67e-64 | 204 |
MS.gene32715.t1 | MTR_0155s0040 | 32.710 | 321 | 198 | 5 | 2 | 316 | 7 | 315 | 2.50e-63 | 203 |
MS.gene32715.t1 | MTR_6g043240 | 36.585 | 328 | 185 | 6 | 2 | 316 | 14 | 331 | 3.32e-63 | 204 |
MS.gene32715.t1 | MTR_6g043460 | 37.231 | 325 | 182 | 6 | 4 | 316 | 14 | 328 | 3.61e-63 | 204 |
MS.gene32715.t1 | MTR_4g083710 | 36.810 | 326 | 186 | 5 | 1 | 316 | 9 | 324 | 1.81e-62 | 201 |
MS.gene32715.t1 | MTR_2g029730 | 38.235 | 306 | 181 | 4 | 17 | 316 | 23 | 326 | 2.37e-62 | 201 |
MS.gene32715.t1 | MTR_4g029170 | 36.646 | 322 | 188 | 5 | 2 | 316 | 9 | 321 | 8.17e-62 | 199 |
MS.gene32715.t1 | MTR_1g022970 | 38.487 | 304 | 179 | 4 | 19 | 316 | 46 | 347 | 8.62e-62 | 200 |
MS.gene32715.t1 | MTR_1g090760 | 34.663 | 326 | 200 | 6 | 1 | 318 | 12 | 332 | 9.68e-62 | 199 |
MS.gene32715.t1 | MTR_2g008160 | 39.414 | 307 | 174 | 5 | 17 | 316 | 22 | 323 | 1.05e-61 | 199 |
MS.gene32715.t1 | MTR_2g040000 | 36.842 | 304 | 177 | 6 | 23 | 316 | 33 | 331 | 2.80e-61 | 198 |
MS.gene32715.t1 | MTR_4g029200 | 36.513 | 304 | 180 | 2 | 17 | 316 | 44 | 338 | 4.81e-61 | 198 |
MS.gene32715.t1 | MTR_4g125940 | 40.876 | 274 | 146 | 6 | 53 | 316 | 7 | 274 | 2.11e-60 | 194 |
MS.gene32715.t1 | MTR_4g074995 | 37.461 | 323 | 169 | 7 | 4 | 316 | 9 | 308 | 2.63e-60 | 195 |
MS.gene32715.t1 | MTR_0286s0010 | 35.294 | 323 | 197 | 6 | 1 | 316 | 17 | 334 | 4.39e-60 | 195 |
MS.gene32715.t1 | MTR_6g008075 | 35.294 | 323 | 197 | 6 | 1 | 316 | 17 | 334 | 4.39e-60 | 195 |
MS.gene32715.t1 | MTR_3g094670 | 36.223 | 323 | 185 | 5 | 1 | 316 | 14 | 322 | 4.52e-59 | 192 |
MS.gene32715.t1 | MTR_7g072510 | 34.277 | 318 | 196 | 3 | 3 | 316 | 4 | 312 | 2.32e-58 | 190 |
MS.gene32715.t1 | MTR_2g029910 | 36.842 | 304 | 183 | 4 | 22 | 318 | 33 | 334 | 2.46e-58 | 191 |
MS.gene32715.t1 | MTR_8g062780 | 34.877 | 324 | 197 | 7 | 1 | 316 | 7 | 324 | 4.79e-58 | 190 |
MS.gene32715.t1 | MTR_3g467600 | 36.420 | 324 | 188 | 6 | 2 | 316 | 10 | 324 | 1.42e-57 | 189 |
MS.gene32715.t1 | MTR_4g133800 | 37.710 | 297 | 176 | 6 | 24 | 318 | 46 | 335 | 3.23e-57 | 188 |
MS.gene32715.t1 | MTR_3g466180 | 37.304 | 319 | 185 | 4 | 2 | 316 | 16 | 323 | 4.30e-57 | 187 |
MS.gene32715.t1 | MTR_2g437770 | 37.667 | 300 | 177 | 7 | 19 | 316 | 50 | 341 | 6.07e-57 | 187 |
MS.gene32715.t1 | MTR_4g132110 | 34.043 | 329 | 196 | 6 | 2 | 316 | 7 | 328 | 8.66e-57 | 187 |
MS.gene32715.t1 | MTR_2g008730 | 37.267 | 322 | 167 | 6 | 1 | 316 | 9 | 301 | 5.22e-56 | 184 |
MS.gene32715.t1 | MTR_3g094630 | 35.110 | 319 | 190 | 4 | 5 | 316 | 14 | 322 | 1.21e-55 | 183 |
MS.gene32715.t1 | MTR_4g029180 | 35.216 | 301 | 180 | 4 | 22 | 316 | 30 | 321 | 2.13e-55 | 183 |
MS.gene32715.t1 | MTR_7g026990 | 34.564 | 298 | 181 | 3 | 23 | 316 | 35 | 322 | 7.22e-55 | 181 |
MS.gene32715.t1 | MTR_4g132110 | 33.533 | 334 | 196 | 7 | 2 | 316 | 7 | 333 | 1.59e-54 | 181 |
MS.gene32715.t1 | MTR_7g072480 | 32.166 | 314 | 190 | 4 | 12 | 316 | 17 | 316 | 1.96e-54 | 180 |
MS.gene32715.t1 | MTR_5g074710 | 35.185 | 324 | 190 | 7 | 3 | 316 | 8 | 321 | 7.21e-54 | 179 |
MS.gene32715.t1 | MTR_5g033470 | 34.868 | 304 | 185 | 7 | 23 | 316 | 77 | 377 | 9.49e-54 | 180 |
MS.gene32715.t1 | MTR_2g029830 | 39.695 | 262 | 144 | 5 | 64 | 316 | 5 | 261 | 1.16e-53 | 177 |
MS.gene32715.t1 | MTR_4g031140 | 34.268 | 321 | 200 | 8 | 1 | 316 | 10 | 324 | 1.59e-53 | 179 |
MS.gene32715.t1 | MTR_5g074760 | 34.365 | 323 | 193 | 6 | 3 | 316 | 9 | 321 | 2.10e-53 | 177 |
MS.gene32715.t1 | MTR_4g074990 | 34.853 | 307 | 170 | 5 | 17 | 316 | 22 | 305 | 5.62e-53 | 176 |
MS.gene32715.t1 | MTR_5g049280 | 34.839 | 310 | 185 | 7 | 19 | 316 | 33 | 337 | 7.87e-53 | 177 |
MS.gene32715.t1 | MTR_4g030890 | 33.866 | 313 | 192 | 8 | 11 | 316 | 92 | 396 | 2.79e-52 | 177 |
MS.gene32715.t1 | MTR_1g066710 | 33.660 | 306 | 190 | 4 | 17 | 316 | 25 | 323 | 4.09e-52 | 174 |
MS.gene32715.t1 | MTR_5g074740 | 34.985 | 323 | 191 | 6 | 3 | 316 | 9 | 321 | 4.76e-52 | 174 |
MS.gene32715.t1 | MTR_1g115900 | 34.862 | 327 | 188 | 8 | 1 | 316 | 9 | 321 | 6.29e-52 | 174 |
MS.gene32715.t1 | MTR_3g072190 | 37.984 | 258 | 147 | 2 | 63 | 316 | 3 | 251 | 1.29e-51 | 171 |
MS.gene32715.t1 | MTR_5g074860 | 34.675 | 323 | 190 | 7 | 1 | 312 | 9 | 321 | 1.88e-51 | 172 |
MS.gene32715.t1 | MTR_2g067440 | 33.739 | 329 | 184 | 5 | 17 | 313 | 58 | 384 | 3.44e-51 | 174 |
MS.gene32715.t1 | MTR_1g066680 | 33.987 | 306 | 188 | 4 | 17 | 316 | 25 | 322 | 5.75e-51 | 171 |
MS.gene32715.t1 | MTR_1g066640 | 33.660 | 306 | 190 | 4 | 17 | 316 | 25 | 323 | 6.10e-51 | 171 |
MS.gene32715.t1 | MTR_1g066380 | 33.333 | 306 | 191 | 4 | 17 | 316 | 25 | 323 | 7.39e-50 | 169 |
MS.gene32715.t1 | MTR_2g008160 | 34.641 | 306 | 155 | 4 | 17 | 316 | 22 | 288 | 6.20e-49 | 165 |
MS.gene32715.t1 | MTR_4g074980 | 33.550 | 307 | 168 | 5 | 14 | 316 | 20 | 294 | 1.27e-47 | 162 |
MS.gene32715.t1 | MTR_2g078610 | 32.432 | 333 | 186 | 7 | 17 | 313 | 74 | 403 | 1.97e-47 | 164 |
MS.gene32715.t1 | MTR_2g077990 | 32.733 | 333 | 185 | 7 | 17 | 313 | 74 | 403 | 2.19e-47 | 164 |
MS.gene32715.t1 | MTR_4g074980 | 38.017 | 242 | 135 | 3 | 14 | 248 | 20 | 253 | 7.35e-47 | 159 |
MS.gene32715.t1 | MTR_2g078280 | 32.609 | 322 | 178 | 7 | 17 | 302 | 74 | 392 | 1.38e-44 | 156 |
MS.gene32715.t1 | MTR_0147s0010 | 32.911 | 316 | 178 | 6 | 19 | 313 | 77 | 379 | 2.94e-44 | 155 |
MS.gene32715.t1 | MTR_2g008160 | 45.455 | 176 | 94 | 2 | 17 | 191 | 22 | 196 | 1.75e-42 | 145 |
MS.gene32715.t1 | MTR_2g067450 | 32.468 | 308 | 188 | 7 | 17 | 313 | 9 | 307 | 1.70e-39 | 141 |
MS.gene32715.t1 | MTR_1g066380 | 33.588 | 262 | 157 | 6 | 63 | 316 | 3 | 255 | 2.60e-38 | 136 |
MS.gene32715.t1 | MTR_5g074860 | 27.864 | 323 | 173 | 7 | 1 | 312 | 9 | 282 | 5.83e-30 | 115 |
MS.gene32715.t1 | MTR_5g074700 | 33.761 | 234 | 126 | 7 | 90 | 318 | 7 | 216 | 1.13e-29 | 112 |
MS.gene32715.t1 | MTR_3g072210 | 36.269 | 193 | 112 | 3 | 126 | 316 | 55 | 238 | 2.14e-28 | 110 |
MS.gene32715.t1 | MTR_2g029880 | 34.500 | 200 | 117 | 4 | 121 | 318 | 3 | 190 | 3.71e-28 | 108 |
MS.gene32715.t1 | MTR_7g086790 | 33.163 | 196 | 105 | 5 | 66 | 258 | 17 | 189 | 9.59e-26 | 102 |
MS.gene32715.t1 | MTR_5g058120 | 37.821 | 156 | 84 | 3 | 159 | 314 | 15 | 157 | 3.64e-23 | 96.7 |
MS.gene32715.t1 | MTR_3g072260 | 40.476 | 126 | 71 | 1 | 1 | 122 | 8 | 133 | 4.03e-23 | 93.2 |
MS.gene32715.t1 | MTR_7g072490 | 30.213 | 235 | 97 | 8 | 65 | 295 | 2 | 173 | 1.40e-19 | 85.9 |
MS.gene32715.t1 | MTR_4g114220 | 50.617 | 81 | 34 | 1 | 44 | 124 | 28 | 102 | 1.97e-19 | 83.6 |
MS.gene32715.t1 | MTR_6g048160 | 56.923 | 65 | 28 | 0 | 58 | 122 | 22 | 86 | 4.61e-19 | 80.9 |
MS.gene32715.t1 | MTR_7g086810 | 34.746 | 118 | 55 | 1 | 17 | 134 | 4 | 99 | 1.45e-18 | 83.6 |
MS.gene32715.t1 | MTR_1g089005 | 41.026 | 117 | 60 | 3 | 19 | 126 | 15 | 131 | 1.39e-16 | 76.3 |
MS.gene32715.t1 | MTR_3g107060 | 24.806 | 258 | 140 | 8 | 53 | 303 | 108 | 318 | 1.47e-15 | 76.3 |
MS.gene32715.t1 | MTR_7g086785 | 33.962 | 106 | 52 | 2 | 65 | 167 | 4 | 94 | 2.20e-14 | 69.7 |
MS.gene32715.t1 | MTR_2g077980 | 25.271 | 277 | 167 | 9 | 74 | 313 | 8 | 281 | 1.72e-13 | 70.1 |
MS.gene32715.t1 | MTR_4g012865 | 41.791 | 67 | 36 | 1 | 19 | 82 | 77 | 143 | 2.52e-13 | 67.0 |
MS.gene32715.t1 | MTR_1g098320 | 40.541 | 74 | 44 | 0 | 243 | 316 | 51 | 124 | 1.74e-12 | 64.3 |
MS.gene32715.t1 | MTR_7g107500 | 37.363 | 91 | 56 | 1 | 226 | 316 | 8 | 97 | 7.16e-12 | 61.2 |
MS.gene32715.t1 | MTR_4g031040 | 29.771 | 131 | 67 | 4 | 123 | 250 | 23 | 131 | 1.82e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32715.t1 | AT2G24800 | 64.452 | 301 | 106 | 1 | 17 | 316 | 29 | 329 | 1.16e-147 | 418 |
MS.gene32715.t1 | AT4G31760 | 60.000 | 315 | 126 | 0 | 2 | 316 | 12 | 326 | 9.27e-147 | 416 |
MS.gene32715.t1 | AT5G14130 | 42.991 | 321 | 175 | 5 | 1 | 316 | 13 | 330 | 1.41e-84 | 258 |
MS.gene32715.t1 | AT5G14130 | 42.991 | 321 | 175 | 5 | 1 | 316 | 54 | 371 | 3.75e-84 | 258 |
MS.gene32715.t1 | AT2G24800 | 69.512 | 164 | 50 | 0 | 17 | 180 | 29 | 192 | 7.10e-84 | 253 |
MS.gene32715.t1 | AT5G64120 | 46.000 | 300 | 158 | 2 | 17 | 316 | 33 | 328 | 1.33e-82 | 253 |
MS.gene32715.t1 | AT5G51890 | 43.366 | 309 | 162 | 7 | 9 | 309 | 12 | 315 | 1.71e-80 | 247 |
MS.gene32715.t1 | AT5G39580 | 44.746 | 295 | 158 | 3 | 23 | 316 | 29 | 319 | 3.46e-77 | 239 |
MS.gene32715.t1 | AT1G77100 | 40.867 | 323 | 173 | 6 | 3 | 316 | 6 | 319 | 4.14e-76 | 236 |
MS.gene32715.t1 | AT2G18980 | 42.173 | 313 | 172 | 5 | 9 | 316 | 15 | 323 | 4.67e-76 | 236 |
MS.gene32715.t1 | AT1G05260 | 42.444 | 311 | 169 | 5 | 12 | 316 | 19 | 325 | 2.18e-75 | 234 |
MS.gene32715.t1 | AT5G42180 | 41.456 | 316 | 174 | 7 | 1 | 312 | 5 | 313 | 2.95e-75 | 234 |
MS.gene32715.t1 | AT5G66390 | 42.000 | 300 | 165 | 4 | 23 | 316 | 37 | 333 | 3.57e-75 | 234 |
MS.gene32715.t1 | AT4G37530 | 41.479 | 311 | 167 | 5 | 16 | 316 | 24 | 329 | 1.12e-74 | 233 |
MS.gene32715.t1 | AT3G21770 | 42.157 | 306 | 171 | 5 | 12 | 313 | 22 | 325 | 1.14e-74 | 233 |
MS.gene32715.t1 | AT4G25980 | 42.395 | 309 | 163 | 6 | 17 | 316 | 24 | 326 | 1.05e-72 | 228 |
MS.gene32715.t1 | AT3G49960 | 40.498 | 321 | 181 | 6 | 3 | 316 | 12 | 329 | 1.76e-72 | 227 |
MS.gene32715.t1 | AT2G18150 | 39.344 | 305 | 176 | 4 | 18 | 316 | 35 | 336 | 4.49e-72 | 226 |
MS.gene32715.t1 | AT2G18140 | 40.065 | 307 | 171 | 6 | 18 | 316 | 34 | 335 | 1.33e-71 | 225 |
MS.gene32715.t1 | AT4G37520 | 41.042 | 307 | 172 | 5 | 17 | 316 | 25 | 329 | 1.42e-71 | 225 |
MS.gene32715.t1 | AT4G11290 | 41.042 | 307 | 171 | 5 | 17 | 316 | 23 | 326 | 5.59e-71 | 223 |
MS.gene32715.t1 | AT5G64110 | 41.433 | 321 | 177 | 6 | 1 | 316 | 16 | 330 | 8.23e-71 | 223 |
MS.gene32715.t1 | AT5G64100 | 43.434 | 297 | 159 | 5 | 23 | 316 | 41 | 331 | 9.45e-71 | 223 |
MS.gene32715.t1 | AT4G36430 | 39.667 | 300 | 172 | 5 | 23 | 316 | 34 | 330 | 1.52e-70 | 222 |
MS.gene32715.t1 | AT4G17690 | 37.742 | 310 | 180 | 4 | 13 | 316 | 20 | 322 | 1.13e-69 | 220 |
MS.gene32715.t1 | AT5G24070 | 40.000 | 305 | 172 | 4 | 19 | 316 | 35 | 335 | 2.19e-69 | 219 |
MS.gene32715.t1 | AT4G30170 | 39.216 | 306 | 179 | 4 | 15 | 316 | 23 | 325 | 2.48e-69 | 219 |
MS.gene32715.t1 | AT5G15180 | 38.462 | 325 | 184 | 7 | 2 | 316 | 11 | 329 | 2.61e-69 | 219 |
MS.gene32715.t1 | AT2G41480 | 40.461 | 304 | 163 | 6 | 23 | 316 | 33 | 328 | 2.71e-69 | 219 |
MS.gene32715.t1 | AT3G50990 | 40.193 | 311 | 178 | 5 | 11 | 316 | 34 | 341 | 4.16e-69 | 219 |
MS.gene32715.t1 | AT4G33420 | 39.145 | 304 | 164 | 6 | 19 | 316 | 37 | 325 | 5.17e-69 | 218 |
MS.gene32715.t1 | AT5G67400 | 39.938 | 323 | 180 | 8 | 3 | 316 | 12 | 329 | 5.33e-69 | 218 |
MS.gene32715.t1 | AT4G37520 | 40.717 | 307 | 170 | 6 | 17 | 316 | 25 | 326 | 6.82e-69 | 218 |
MS.gene32715.t1 | AT4G33420 | 39.145 | 304 | 164 | 6 | 19 | 316 | 84 | 372 | 2.31e-68 | 218 |
MS.gene32715.t1 | AT3G03670 | 37.855 | 317 | 190 | 3 | 3 | 316 | 9 | 321 | 5.33e-68 | 215 |
MS.gene32715.t1 | AT1G14550 | 39.077 | 325 | 177 | 6 | 2 | 316 | 8 | 321 | 9.76e-68 | 214 |
MS.gene32715.t1 | AT1G14540 | 37.072 | 321 | 185 | 4 | 1 | 316 | 7 | 315 | 1.69e-67 | 214 |
MS.gene32715.t1 | AT5G47000 | 37.421 | 318 | 187 | 4 | 5 | 316 | 19 | 330 | 3.06e-67 | 214 |
MS.gene32715.t1 | AT2G43480 | 36.808 | 307 | 181 | 5 | 18 | 316 | 34 | 335 | 3.35e-67 | 214 |
MS.gene32715.t1 | AT1G71695 | 37.742 | 310 | 179 | 5 | 13 | 316 | 38 | 339 | 5.52e-67 | 214 |
MS.gene32715.t1 | AT3G01190 | 40.000 | 310 | 166 | 9 | 16 | 316 | 23 | 321 | 1.23e-66 | 212 |
MS.gene32715.t1 | AT5G17820 | 37.580 | 314 | 186 | 4 | 3 | 316 | 10 | 313 | 1.67e-66 | 211 |
MS.gene32715.t1 | AT2G34060 | 37.952 | 332 | 184 | 8 | 1 | 312 | 13 | 342 | 3.95e-66 | 211 |
MS.gene32715.t1 | AT5G17820 | 37.580 | 314 | 186 | 4 | 3 | 316 | 63 | 366 | 1.09e-65 | 211 |
MS.gene32715.t1 | AT1G34510 | 37.299 | 311 | 177 | 5 | 10 | 316 | 13 | 309 | 1.33e-65 | 209 |
MS.gene32715.t1 | AT4G26010 | 38.438 | 320 | 175 | 7 | 1 | 316 | 8 | 309 | 1.61e-65 | 209 |
MS.gene32715.t1 | AT4G26010 | 38.558 | 319 | 174 | 7 | 2 | 316 | 37 | 337 | 2.57e-65 | 209 |
MS.gene32715.t1 | AT5G19890 | 37.540 | 309 | 183 | 5 | 13 | 316 | 24 | 327 | 1.73e-64 | 206 |
MS.gene32715.t1 | AT4G08770 | 38.658 | 313 | 182 | 5 | 12 | 316 | 17 | 327 | 2.89e-64 | 206 |
MS.gene32715.t1 | AT1G44970 | 40.453 | 309 | 176 | 4 | 14 | 316 | 40 | 346 | 5.17e-64 | 206 |
MS.gene32715.t1 | AT4G08780 | 38.658 | 313 | 182 | 5 | 12 | 316 | 17 | 327 | 7.69e-64 | 205 |
MS.gene32715.t1 | AT1G30870 | 39.867 | 301 | 172 | 5 | 19 | 316 | 51 | 345 | 1.46e-63 | 205 |
MS.gene32715.t1 | AT2G35380 | 37.954 | 303 | 180 | 3 | 23 | 317 | 34 | 336 | 1.74e-63 | 204 |
MS.gene32715.t1 | AT4G16270 | 38.835 | 309 | 168 | 7 | 19 | 316 | 50 | 348 | 1.78e-63 | 204 |
MS.gene32715.t1 | AT1G49570 | 39.103 | 312 | 167 | 5 | 15 | 312 | 44 | 346 | 3.40e-63 | 204 |
MS.gene32715.t1 | AT5G05340 | 36.570 | 309 | 179 | 5 | 15 | 316 | 26 | 324 | 5.44e-63 | 202 |
MS.gene32715.t1 | AT5G19880 | 35.077 | 325 | 197 | 5 | 2 | 316 | 9 | 329 | 1.76e-62 | 201 |
MS.gene32715.t1 | AT1G05240 | 36.688 | 308 | 177 | 6 | 19 | 316 | 26 | 325 | 2.08e-62 | 201 |
MS.gene32715.t1 | AT1G05250 | 36.688 | 308 | 177 | 6 | 19 | 316 | 26 | 325 | 2.08e-62 | 201 |
MS.gene32715.t1 | AT3G49110 | 39.073 | 302 | 174 | 5 | 23 | 316 | 37 | 336 | 2.14e-62 | 202 |
MS.gene32715.t1 | AT1G24110 | 37.152 | 323 | 186 | 7 | 3 | 316 | 8 | 322 | 3.70e-62 | 201 |
MS.gene32715.t1 | AT4G37530 | 41.985 | 262 | 137 | 5 | 16 | 267 | 24 | 280 | 4.14e-62 | 199 |
MS.gene32715.t1 | AT2G39040 | 40.000 | 310 | 171 | 8 | 18 | 316 | 45 | 350 | 4.62e-62 | 201 |
MS.gene32715.t1 | AT5G06730 | 36.957 | 322 | 191 | 6 | 2 | 316 | 18 | 334 | 6.74e-62 | 201 |
MS.gene32715.t1 | AT5G40150 | 38.387 | 310 | 170 | 5 | 17 | 316 | 30 | 328 | 1.03e-61 | 199 |
MS.gene32715.t1 | AT3G28200 | 36.422 | 313 | 177 | 5 | 14 | 316 | 16 | 316 | 1.58e-61 | 198 |
MS.gene32715.t1 | AT5G06720 | 36.957 | 322 | 191 | 5 | 2 | 316 | 17 | 333 | 6.47e-61 | 197 |
MS.gene32715.t1 | AT3G32980 | 36.741 | 313 | 187 | 5 | 13 | 316 | 24 | 334 | 1.32e-60 | 197 |
MS.gene32715.t1 | AT5G58400 | 36.013 | 311 | 183 | 4 | 13 | 316 | 24 | 325 | 5.28e-60 | 195 |
MS.gene32715.t1 | AT5G58390 | 36.218 | 312 | 183 | 4 | 12 | 316 | 14 | 316 | 1.12e-59 | 194 |
MS.gene32715.t1 | AT3G49120 | 37.748 | 302 | 178 | 5 | 23 | 316 | 36 | 335 | 6.54e-59 | 193 |
MS.gene32715.t1 | AT3G17070 | 36.304 | 303 | 179 | 4 | 19 | 312 | 38 | 335 | 7.06e-59 | 192 |
MS.gene32715.t1 | AT4G21960 | 34.615 | 312 | 191 | 4 | 11 | 316 | 23 | 327 | 2.00e-58 | 191 |
MS.gene32715.t1 | AT2G38390 | 35.202 | 321 | 199 | 5 | 3 | 316 | 15 | 333 | 1.49e-56 | 187 |
MS.gene32715.t1 | AT4G33870 | 33.134 | 335 | 184 | 4 | 17 | 313 | 66 | 398 | 1.57e-55 | 186 |
MS.gene32715.t1 | AT2G38380 | 34.891 | 321 | 200 | 5 | 3 | 316 | 15 | 333 | 2.35e-55 | 184 |
MS.gene32715.t1 | AT1G68850 | 33.025 | 324 | 205 | 5 | 3 | 316 | 14 | 335 | 3.85e-54 | 180 |
MS.gene32715.t1 | AT5G22410 | 37.086 | 302 | 180 | 6 | 19 | 315 | 28 | 324 | 1.22e-53 | 179 |
MS.gene32715.t1 | AT2G22420 | 33.851 | 322 | 196 | 9 | 3 | 316 | 7 | 319 | 1.44e-52 | 176 |
MS.gene32715.t1 | AT2G37130 | 34.810 | 316 | 190 | 5 | 8 | 316 | 21 | 327 | 1.90e-52 | 175 |
MS.gene32715.t1 | AT2G37130 | 34.983 | 303 | 183 | 4 | 21 | 316 | 1 | 296 | 1.02e-51 | 172 |
MS.gene32715.t1 | AT5G39580 | 49.689 | 161 | 80 | 1 | 23 | 183 | 29 | 188 | 5.90e-46 | 156 |
MS.gene32715.t1 | AT4G25980 | 47.647 | 170 | 81 | 4 | 17 | 182 | 69 | 234 | 5.81e-45 | 155 |
MS.gene32715.t1 | AT2G35380 | 36.885 | 244 | 150 | 2 | 78 | 317 | 5 | 248 | 1.53e-44 | 152 |
MS.gene32715.t1 | AT3G17070 | 34.909 | 275 | 164 | 5 | 47 | 312 | 4 | 272 | 3.06e-43 | 150 |
Find 62 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGATCTTGTGGTTCTTTC+AGG | 0.062320 | 3.3:-87062991 | MS.gene32715:intron |
CAGCTCATTGCAACACATTC+AGG | 0.242894 | 3.3:-87062362 | MS.gene32715:CDS |
ACGGATGGTTGTGCATTTAT+TGG | 0.252981 | 3.3:+87062249 | None:intergenic |
GACTTCCATTTCTGTCTTGT+TGG | 0.319000 | 3.3:+87062331 | None:intergenic |
TCGTAAAGCTAACCAGTATT+GGG | 0.325002 | 3.3:-87062044 | MS.gene32715:CDS |
CCACCAACAGATCTGTTTCC+TGG | 0.329081 | 3.3:+87063356 | None:intergenic |
ACCATGCGAAGGAGCTTTCC+AGG | 0.352693 | 3.3:+87064213 | None:intergenic |
AAGTAAGGACAATCCTTTAC+TGG | 0.356162 | 3.3:+87063011 | None:intergenic |
TCAAACGATCCTTCCATTCC+TGG | 0.360199 | 3.3:-87064231 | MS.gene32715:CDS |
GTCAGTCTTTACCCCAATAC+TGG | 0.369132 | 3.3:+87062032 | None:intergenic |
TCTGCACAAGAAACAGTTCC+TGG | 0.392995 | 3.3:+87063287 | None:intergenic |
CATAATTAGTATCAATGGTT+TGG | 0.404838 | 3.3:+87062295 | None:intergenic |
ATCAGCATAATTAGTATCAA+TGG | 0.413882 | 3.3:+87062290 | None:intergenic |
TTCGTAAAGCTAACCAGTAT+TGG | 0.435505 | 3.3:-87062045 | MS.gene32715:CDS |
AGTTCTGTTCCAGTCTGATT+CGG | 0.449329 | 3.3:-87062154 | MS.gene32715:CDS |
AAACTAGTGTCCACAATGTT+GGG | 0.461068 | 3.3:+87063063 | None:intergenic |
CGTTTCCAACAAGACAGAAA+TGG | 0.463042 | 3.3:-87062336 | MS.gene32715:CDS |
TTTGCAGGGGCTCATACAAT+AGG | 0.464251 | 3.3:-87062387 | MS.gene32715:intron |
TAACCTCTACAAAGCAATCA+TGG | 0.472084 | 3.3:+87064187 | None:intergenic |
CTTATGATTAACTCTGCTGT+TGG | 0.485784 | 3.3:+87064276 | None:intergenic |
TCCTGGAAAGCTCCTTCGCA+TGG | 0.487831 | 3.3:-87064214 | MS.gene32715:CDS |
CCTGTAGGAATCTGAACCCT+TGG | 0.487984 | 3.3:+87063126 | None:intergenic |
TCAAATAGCATAGACGTTTG+AGG | 0.488038 | 3.3:+87062210 | None:intergenic |
GCGAAGGAGCTTTCCAGGAA+TGG | 0.495018 | 3.3:+87064218 | None:intergenic |
AAAACTAGTGTCCACAATGT+TGG | 0.496293 | 3.3:+87063062 | None:intergenic |
CCAAGGGTTCAGATTCCTAC+AGG | 0.501809 | 3.3:-87063126 | MS.gene32715:CDS |
TTTCCATGATTGCTTTGTAG+AGG | 0.503451 | 3.3:-87064190 | MS.gene32715:intron |
AATACAGAACAAAGTGATCC+AGG | 0.505659 | 3.3:-87063374 | MS.gene32715:CDS |
ATTGTCCTTACTTGATCTTG+TGG | 0.511927 | 3.3:-87063001 | MS.gene32715:CDS |
AAGAACCACAAGATCAAGTA+AGG | 0.515531 | 3.3:+87062996 | None:intergenic |
AGCTCATTGCAACACATTCA+GGG | 0.538111 | 3.3:-87062361 | MS.gene32715:CDS |
ATTCCTACAGGTAGGAGAGA+TGG | 0.545064 | 3.3:-87063114 | MS.gene32715:CDS |
TCATCAAAACCGAATCAGAC+TGG | 0.549240 | 3.3:+87062145 | None:intergenic |
TACAGGTAGGAGAGATGGAA+TGG | 0.551892 | 3.3:-87063109 | MS.gene32715:CDS |
GAGCTTAAGCATCTCGTCCA+TGG | 0.554422 | 3.3:+87063038 | None:intergenic |
TGAAACAGGCTGGTGGACCA+AGG | 0.560284 | 3.3:-87063143 | MS.gene32715:intron |
GTTCTTGAGATGTTCTGCCC+AGG | 0.563271 | 3.3:-87063305 | MS.gene32715:CDS |
GATCCAGGAAACAGATCTGT+TGG | 0.572722 | 3.3:-87063359 | MS.gene32715:CDS |
AGGATCGATGTTCACTGCCA+CGG | 0.580331 | 3.3:+87062230 | None:intergenic |
GATGCATCTTTAATGCTACA+AGG | 0.586931 | 3.3:-87063401 | MS.gene32715:CDS |
TCGATGTTCACTGCCACGGA+TGG | 0.590989 | 3.3:+87062234 | None:intergenic |
ATTCCATCTCTCCTACCTGT+AGG | 0.594277 | 3.3:+87063111 | None:intergenic |
AGGAGCTTTCCAGGAATGGA+AGG | 0.600921 | 3.3:+87064222 | None:intergenic |
AGCAAGATTAGAAGTTACAG+AGG | 0.604742 | 3.3:+87064323 | None:intergenic |
CCAGGAAACAGATCTGTTGG+TGG | 0.604813 | 3.3:-87063356 | MS.gene32715:CDS |
GAAACAGGCTGGTGGACCAA+GGG | 0.608211 | 3.3:-87063142 | MS.gene32715:intron |
CGCTTTGTGAAACAGGCTGG+TGG | 0.609729 | 3.3:-87063150 | MS.gene32715:intron |
CTGCACAAGAAACAGTTCCT+GGG | 0.613867 | 3.3:+87063288 | None:intergenic |
CGTAAAGCTAACCAGTATTG+GGG | 0.617888 | 3.3:-87062043 | MS.gene32715:CDS |
AATAAATGCACAACCATCCG+TGG | 0.629289 | 3.3:-87062247 | MS.gene32715:CDS |
GGGGTAAAGACTGACGAGGA+GGG | 0.631267 | 3.3:-87062024 | MS.gene32715:CDS |
TGATAGCACGAGGAAACTAG+TGG | 0.631626 | 3.3:-87062118 | MS.gene32715:CDS |
AATGGAAGGATCGTTTGAAG+AGG | 0.631778 | 3.3:+87064236 | None:intergenic |
ATGCATCTTTAATGCTACAA+GGG | 0.633421 | 3.3:-87063400 | MS.gene32715:CDS |
AAATGTTAGACCCAACATTG+TGG | 0.635934 | 3.3:-87063073 | MS.gene32715:CDS |
AATCATGGAAAACCATGCGA+AGG | 0.639071 | 3.3:+87064202 | None:intergenic |
TGGGGTAAAGACTGACGAGG+AGG | 0.660389 | 3.3:-87062025 | MS.gene32715:CDS |
GCTCATTGCAACACATTCAG+GGG | 0.678269 | 3.3:-87062360 | MS.gene32715:CDS |
GGGTTCAGATTCCTACAGGT+AGG | 0.678330 | 3.3:-87063122 | MS.gene32715:CDS |
TGATGAACGATGATAGCACG+AGG | 0.718494 | 3.3:-87062128 | MS.gene32715:CDS |
TAGCACGAGGAAACTAGTGG+AGG | 0.726315 | 3.3:-87062115 | MS.gene32715:CDS |
TATTGGGGTAAAGACTGACG+AGG | 0.747530 | 3.3:-87062028 | MS.gene32715:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTAAAGTAAATATAGTG+AGG | + | chr3.3:87063918-87063937 | None:intergenic | 15.0% |
!! | ACTCAAAATATTCAAAAAAC+CGG | + | chr3.3:87063783-87063802 | None:intergenic | 20.0% |
!! | AGAGAATTATAATTCTGATA+TGG | - | chr3.3:87063678-87063697 | MS.gene32715:intron | 20.0% |
!! | ATAATAATCTTATTGCATCA+AGG | + | chr3.3:87062906-87062925 | None:intergenic | 20.0% |
!!! | AAGATTATTATTTGAAATGC+AGG | - | chr3.3:87062915-87062934 | MS.gene32715:intron | 20.0% |
!!! | AGATTATTATTTGAAATGCA+GGG | - | chr3.3:87062916-87062935 | MS.gene32715:intron | 20.0% |
!!! | ATATTTTTGTCTAATACACT+TGG | + | chr3.3:87063867-87063886 | None:intergenic | 20.0% |
!!! | CCAACTAATGTTTTAAAAAT+TGG | + | chr3.3:87063811-87063830 | None:intergenic | 20.0% |
!!! | CCAATTTTTAAAACATTAGT+TGG | - | chr3.3:87063808-87063827 | MS.gene32715:intron | 20.0% |
!!! | CTGCATTTTTTTTTTTACAT+TGG | - | chr3.3:87062860-87062879 | MS.gene32715:intron | 20.0% |
!!! | TAATGTTTTAAAAATTGGAC+CGG | + | chr3.3:87063806-87063825 | None:intergenic | 20.0% |
!!! | TTTTTTGAATATTTTGAGTC+CGG | - | chr3.3:87063784-87063803 | MS.gene32715:intron | 20.0% |
! | ACTTGATGTGAAATTCAAAT+TGG | - | chr3.3:87062406-87062425 | MS.gene32715:intron | 25.0% |
! | AGATAGTGAGGTATAATAAT+TGG | - | chr3.3:87062832-87062851 | MS.gene32715:intron | 25.0% |
! | ATCAGCATAATTAGTATCAA+TGG | + | chr3.3:87064057-87064076 | None:intergenic | 25.0% |
! | CAAAAGTTAGAAAGAGAAAT+AGG | + | chr3.3:87063834-87063853 | None:intergenic | 25.0% |
! | CATAATTAGTATCAATGGTT+TGG | + | chr3.3:87064052-87064071 | None:intergenic | 25.0% |
! | GATAGTGAGGTATAATAATT+GGG | - | chr3.3:87062833-87062852 | MS.gene32715:intron | 25.0% |
!! | AAGAACTTTTCTTTGACAAT+TGG | - | chr3.3:87064267-87064286 | MS.gene32715:CDS | 25.0% |
!! | AGAACTTTTCTTTGACAATT+GGG | - | chr3.3:87064268-87064287 | MS.gene32715:CDS | 25.0% |
!!! | ACCAAAATGTGTTACTTTAT+GGG | + | chr3.3:87063476-87063495 | None:intergenic | 25.0% |
!!! | ATAAAGTAACACATTTTGGT+CGG | - | chr3.3:87063476-87063495 | MS.gene32715:intron | 25.0% |
!!! | CTATTTCTCTTTCTAACTTT+TGG | - | chr3.3:87063832-87063851 | MS.gene32715:intron | 25.0% |
AAAAACTACTACATGGAATG+AGG | + | chr3.3:87063648-87063667 | None:intergenic | 30.0% | |
AAAACTACTACATGGAATGA+GGG | + | chr3.3:87063647-87063666 | None:intergenic | 30.0% | |
ATGCATCTTTAATGCTACAA+GGG | - | chr3.3:87062944-87062963 | MS.gene32715:intron | 30.0% | |
CATAAGCTCTCTTATGAAAA+CGG | - | chr3.3:87062276-87062295 | MS.gene32715:CDS | 30.0% | |
CTAAAAATAGCTTATGCACA+TGG | + | chr3.3:87062248-87062267 | None:intergenic | 30.0% | |
TGAACGATGATTATAGTTGA+AGG | - | chr3.3:87063618-87063637 | MS.gene32715:intron | 30.0% | |
! | ATTCCATGTAGTAGTTTTTG+AGG | - | chr3.3:87063649-87063668 | MS.gene32715:intron | 30.0% |
! | GAACTTTTCTTTGACAATTG+GGG | - | chr3.3:87064269-87064288 | MS.gene32715:CDS | 30.0% |
! | TATTCAAAAAACCGGCTTAA+AGG | + | chr3.3:87063775-87063794 | None:intergenic | 30.0% |
! | TCCCATAAAGTAACACATTT+TGG | - | chr3.3:87063472-87063491 | MS.gene32715:intron | 30.0% |
!! | CATTGGCTTATGAATTATGA+TGG | - | chr3.3:87062877-87062896 | MS.gene32715:intron | 30.0% |
!! | GACCAAAATGTGTTACTTTA+TGG | + | chr3.3:87063477-87063496 | None:intergenic | 30.0% |
!! | GATCTTACAAGTCATTTTGT+AGG | - | chr3.3:87062578-87062597 | MS.gene32715:intron | 30.0% |
AAAACTAGTGTCCACAATGT+TGG | + | chr3.3:87063285-87063304 | None:intergenic | 35.0% | |
AAACTAGTGTCCACAATGTT+GGG | + | chr3.3:87063284-87063303 | None:intergenic | 35.0% | |
AAATGTTAGACCCAACATTG+TGG | - | chr3.3:87063271-87063290 | MS.gene32715:CDS | 35.0% | |
AAGAACCACAAGATCAAGTA+AGG | + | chr3.3:87063351-87063370 | None:intergenic | 35.0% | |
AAGTAAGGACAATCCTTTAC+TGG | + | chr3.3:87063336-87063355 | None:intergenic | 35.0% | |
AATACAGAACAAAGTGATCC+AGG | - | chr3.3:87062970-87062989 | MS.gene32715:intron | 35.0% | |
ACATGTCTATGTCTGATTGA+AGG | + | chr3.3:87063150-87063169 | None:intergenic | 35.0% | |
AGCAAGATTAGAAGTTACAG+AGG | + | chr3.3:87062024-87062043 | None:intergenic | 35.0% | |
ATTGTCCTTACTTGATCTTG+TGG | - | chr3.3:87063343-87063362 | MS.gene32715:CDS | 35.0% | |
CAACCTCAAAAACTACTACA+TGG | + | chr3.3:87063655-87063674 | None:intergenic | 35.0% | |
CTAATAGTTAAGCTTTGCAG+GGG | - | chr3.3:87063944-87063963 | MS.gene32715:intron | 35.0% | |
CTTATGATTAACTCTGCTGT+TGG | + | chr3.3:87062071-87062090 | None:intergenic | 35.0% | |
GATGCATCTTTAATGCTACA+AGG | - | chr3.3:87062943-87062962 | MS.gene32715:intron | 35.0% | |
GCTAATAGTTAAGCTTTGCA+GGG | - | chr3.3:87063943-87063962 | MS.gene32715:intron | 35.0% | |
TAAAGTTGTGATGACCTTAG+AGG | - | chr3.3:87062633-87062652 | MS.gene32715:intron | 35.0% | |
TAACCAAAACATGTGATGCA+TGG | + | chr3.3:87062472-87062491 | None:intergenic | 35.0% | |
TAACCTCTACAAAGCAATCA+TGG | + | chr3.3:87062160-87062179 | None:intergenic | 35.0% | |
TCAAATAGCATAGACGTTTG+AGG | + | chr3.3:87064137-87064156 | None:intergenic | 35.0% | |
TCGTAAAGCTAACCAGTATT+GGG | - | chr3.3:87064300-87064319 | MS.gene32715:CDS | 35.0% | |
TGACTTAGATAGTGCTTGTA+AGG | - | chr3.3:87062542-87062561 | MS.gene32715:intron | 35.0% | |
TGCTAATAGTTAAGCTTTGC+AGG | - | chr3.3:87063942-87063961 | MS.gene32715:intron | 35.0% | |
TGTCAAAGATCGACAAGTAT+CGG | + | chr3.3:87062707-87062726 | None:intergenic | 35.0% | |
TTAGTGCTTCATAGATAGTG+AGG | - | chr3.3:87062820-87062839 | MS.gene32715:intron | 35.0% | |
TTCGTAAAGCTAACCAGTAT+TGG | - | chr3.3:87064299-87064318 | MS.gene32715:CDS | 35.0% | |
TTTCCATGATTGCTTTGTAG+AGG | - | chr3.3:87062154-87062173 | MS.gene32715:CDS | 35.0% | |
! | ATGTGATGCATGGACTAATT+CGG | + | chr3.3:87062462-87062481 | None:intergenic | 35.0% |
! | CAGACATAGACATGTCTTTT+TGG | - | chr3.3:87063155-87063174 | MS.gene32715:intron | 35.0% |
! | CGTTTTCATAAGAGAGCTTA+TGG | + | chr3.3:87062278-87062297 | None:intergenic | 35.0% |
! | CTTAAGCTCTTTTCCAGTAA+AGG | - | chr3.3:87063320-87063339 | MS.gene32715:CDS | 35.0% |
! | GGATAGTATAAGAAGTGCAA+TGG | + | chr3.3:87063129-87063148 | None:intergenic | 35.0% |
!! | TCACATCAAGTAGTCTTGTT+TGG | + | chr3.3:87062397-87062416 | None:intergenic | 35.0% |
AATAAATGCACAACCATCCG+TGG | - | chr3.3:87064097-87064116 | MS.gene32715:intron | 40.0% | |
AATCATGGAAAACCATGCGA+AGG | + | chr3.3:87062145-87062164 | None:intergenic | 40.0% | |
AATGGAAGGATCGTTTGAAG+AGG | + | chr3.3:87062111-87062130 | None:intergenic | 40.0% | |
ACCAAGCAAATGACATTCTG+TGG | - | chr3.3:87062200-87062219 | MS.gene32715:CDS | 40.0% | |
ACGGATGGTTGTGCATTTAT+TGG | + | chr3.3:87064098-87064117 | None:intergenic | 40.0% | |
ACTATTGCATGCAACCTCTA+AGG | + | chr3.3:87062650-87062669 | None:intergenic | 40.0% | |
AGCTCATTGCAACACATTCA+GGG | - | chr3.3:87063983-87064002 | MS.gene32715:intron | 40.0% | |
AGTTCTGTTCCAGTCTGATT+CGG | - | chr3.3:87064190-87064209 | MS.gene32715:intron | 40.0% | |
CAAGTCTCAACATGTCAAGA+TGG | + | chr3.3:87063570-87063589 | None:intergenic | 40.0% | |
CATGACACTGAAGTTGACAT+CGG | + | chr3.3:87062785-87062804 | None:intergenic | 40.0% | |
CCAAGCAAATGACATTCTGT+GGG | - | chr3.3:87062201-87062220 | MS.gene32715:CDS | 40.0% | |
CGTAAAGCTAACCAGTATTG+GGG | - | chr3.3:87064301-87064320 | MS.gene32715:CDS | 40.0% | |
CGTTTCCAACAAGACAGAAA+TGG | - | chr3.3:87064008-87064027 | MS.gene32715:intron | 40.0% | |
CTTGATCTTGTGGTTCTTTC+AGG | - | chr3.3:87063353-87063372 | MS.gene32715:CDS | 40.0% | |
GACTTCCATTTCTGTCTTGT+TGG | + | chr3.3:87064016-87064035 | None:intergenic | 40.0% | |
TCATCAAAACCGAATCAGAC+TGG | + | chr3.3:87064202-87064221 | None:intergenic | 40.0% | |
TGAAAGACGCTTTGTGAAAC+AGG | - | chr3.3:87063187-87063206 | MS.gene32715:intron | 40.0% | |
! | AGTCCATGCATCACATGTTT+TGG | - | chr3.3:87062466-87062485 | MS.gene32715:intron | 40.0% |
!! | AAGTAACACATTTTGGTCGG+TGG | - | chr3.3:87063479-87063498 | MS.gene32715:intron | 40.0% |
!!! | TGTGGACACTAGTTTTACCA+TGG | - | chr3.3:87063289-87063308 | MS.gene32715:CDS | 40.0% |
ATTCCATCTCTCCTACCTGT+AGG | + | chr3.3:87063236-87063255 | None:intergenic | 45.0% | |
ATTCCTACAGGTAGGAGAGA+TGG | - | chr3.3:87063230-87063249 | MS.gene32715:intron | 45.0% | |
CACTCAACACATCGTATTGG+TGG | + | chr3.3:87062683-87062702 | None:intergenic | 45.0% | |
CAGCTCATTGCAACACATTC+AGG | - | chr3.3:87063982-87064001 | MS.gene32715:intron | 45.0% | |
CTGCACAAGAAACAGTTCCT+GGG | + | chr3.3:87063059-87063078 | None:intergenic | 45.0% | |
CTTGTAAGGTTTGAGCAGTC+TGG | - | chr3.3:87062556-87062575 | MS.gene32715:intron | 45.0% | |
GATCCAGGAAACAGATCTGT+TGG | - | chr3.3:87062985-87063004 | MS.gene32715:intron | 45.0% | |
GCTCATTGCAACACATTCAG+GGG | - | chr3.3:87063984-87064003 | MS.gene32715:intron | 45.0% | |
GGACACTCAACACATCGTAT+TGG | + | chr3.3:87062686-87062705 | None:intergenic | 45.0% | |
GTCAGTCTTTACCCCAATAC+TGG | + | chr3.3:87064315-87064334 | None:intergenic | 45.0% | |
TACAGGTAGGAGAGATGGAA+TGG | - | chr3.3:87063235-87063254 | MS.gene32715:intron | 45.0% | |
TACTCCAGATGTCTAGTCTC+TGG | - | chr3.3:87063728-87063747 | MS.gene32715:intron | 45.0% | |
TATTGGGGTAAAGACTGACG+AGG | - | chr3.3:87064316-87064335 | MS.gene32715:CDS | 45.0% | |
TCAAACGATCCTTCCATTCC+TGG | - | chr3.3:87062113-87062132 | MS.gene32715:CDS | 45.0% | |
TCTGCACAAGAAACAGTTCC+TGG | + | chr3.3:87063060-87063079 | None:intergenic | 45.0% | |
TGATAGCACGAGGAAACTAG+TGG | - | chr3.3:87064226-87064245 | MS.gene32715:CDS | 45.0% | |
TGATGAACGATGATAGCACG+AGG | - | chr3.3:87064216-87064235 | MS.gene32715:CDS | 45.0% | |
TTTGCAGGGGCTCATACAAT+AGG | - | chr3.3:87063957-87063976 | MS.gene32715:intron | 45.0% | |
! | CCCACAGAATGTCATTTGCT+TGG | + | chr3.3:87062204-87062223 | None:intergenic | 45.0% |
! | GTGTTGACAGTCCTTTAAGC+CGG | - | chr3.3:87063761-87063780 | MS.gene32715:intron | 45.0% |
! | TGATGCATGGACTAATTCGG+AGG | + | chr3.3:87062459-87062478 | None:intergenic | 45.0% |
!! | GAGACTTGAGAGTACTACGT+TGG | - | chr3.3:87063582-87063601 | MS.gene32715:intron | 45.0% |
ACACTGACACGACATGCATG+TGG | - | chr3.3:87062724-87062743 | MS.gene32715:intron | 50.0% | |
AGACGCTTTGTGAAACAGGC+TGG | - | chr3.3:87063191-87063210 | MS.gene32715:intron | 50.0% | |
AGGAGCTTTCCAGGAATGGA+AGG | + | chr3.3:87062125-87062144 | None:intergenic | 50.0% | |
AGGATCGATGTTCACTGCCA+CGG | + | chr3.3:87064117-87064136 | None:intergenic | 50.0% | |
CAAGCCAGAGACTAGACATC+TGG | + | chr3.3:87063735-87063754 | None:intergenic | 50.0% | |
CCAAGGGTTCAGATTCCTAC+AGG | - | chr3.3:87063218-87063237 | MS.gene32715:intron | 50.0% | |
CCACCAACAGATCTGTTTCC+TGG | + | chr3.3:87062991-87063010 | None:intergenic | 50.0% | |
CCAGGAAACAGATCTGTTGG+TGG | - | chr3.3:87062988-87063007 | MS.gene32715:intron | 50.0% | |
CCTGTAGGAATCTGAACCCT+TGG | + | chr3.3:87063221-87063240 | None:intergenic | 50.0% | |
GAGCTTAAGCATCTCGTCCA+TGG | + | chr3.3:87063309-87063328 | None:intergenic | 50.0% | |
GGGTTCAGATTCCTACAGGT+AGG | - | chr3.3:87063222-87063241 | MS.gene32715:intron | 50.0% | |
GTTCTTGAGATGTTCTGCCC+AGG | - | chr3.3:87063039-87063058 | MS.gene32715:CDS | 50.0% | |
TAGCACGAGGAAACTAGTGG+AGG | - | chr3.3:87064229-87064248 | MS.gene32715:CDS | 50.0% | |
! | GATGTCTAGTCTCTGGCTTG+AGG | - | chr3.3:87063735-87063754 | MS.gene32715:intron | 50.0% |
ACCATGCGAAGGAGCTTTCC+AGG | + | chr3.3:87062134-87062153 | None:intergenic | 55.0% | |
CGCTTTGTGAAACAGGCTGG+TGG | - | chr3.3:87063194-87063213 | MS.gene32715:intron | 55.0% | |
GCGAAGGAGCTTTCCAGGAA+TGG | + | chr3.3:87062129-87062148 | None:intergenic | 55.0% | |
GGGGTAAAGACTGACGAGGA+GGG | - | chr3.3:87064320-87064339 | MS.gene32715:CDS | 55.0% | |
TCCTGGAAAGCTCCTTCGCA+TGG | - | chr3.3:87062130-87062149 | MS.gene32715:CDS | 55.0% | |
TCGATGTTCACTGCCACGGA+TGG | + | chr3.3:87064113-87064132 | None:intergenic | 55.0% | |
TGGGGTAAAGACTGACGAGG+AGG | - | chr3.3:87064319-87064338 | MS.gene32715:CDS | 55.0% | |
! | GAAACAGGCTGGTGGACCAA+GGG | - | chr3.3:87063202-87063221 | MS.gene32715:intron | 55.0% |
! | TGAAACAGGCTGGTGGACCA+AGG | - | chr3.3:87063201-87063220 | MS.gene32715:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 87061984 | 87064382 | 87061984 | ID=MS.gene32715 |
chr3.3 | mRNA | 87061984 | 87064382 | 87061984 | ID=MS.gene32715.t1;Parent=MS.gene32715 |
chr3.3 | exon | 87064191 | 87064382 | 87064191 | ID=MS.gene32715.t1.exon1;Parent=MS.gene32715.t1 |
chr3.3 | CDS | 87064191 | 87064382 | 87064191 | ID=cds.MS.gene32715.t1;Parent=MS.gene32715.t1 |
chr3.3 | exon | 87063250 | 87063429 | 87063250 | ID=MS.gene32715.t1.exon2;Parent=MS.gene32715.t1 |
chr3.3 | CDS | 87063250 | 87063429 | 87063250 | ID=cds.MS.gene32715.t1;Parent=MS.gene32715.t1 |
chr3.3 | exon | 87062992 | 87063157 | 87062992 | ID=MS.gene32715.t1.exon3;Parent=MS.gene32715.t1 |
chr3.3 | CDS | 87062992 | 87063157 | 87062992 | ID=cds.MS.gene32715.t1;Parent=MS.gene32715.t1 |
chr3.3 | exon | 87061984 | 87062402 | 87061984 | ID=MS.gene32715.t1.exon4;Parent=MS.gene32715.t1 |
chr3.3 | CDS | 87061984 | 87062402 | 87061984 | ID=cds.MS.gene32715.t1;Parent=MS.gene32715.t1 |
Gene Sequence |
Protein sequence |