AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35931


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35931.t1 MTR_2g088770 97.255 255 7 0 1 255 72 326 0.0 518
MS.gene35931.t1 MTR_4g046713 70.196 255 74 2 1 254 73 326 1.58e-135 385
MS.gene35931.t1 MTR_7g107520 55.294 255 108 4 1 254 71 320 3.10e-93 277
MS.gene35931.t1 MTR_5g017860 47.656 256 130 4 1 254 73 326 7.91e-77 236
MS.gene35931.t1 MTR_5g017850 46.875 256 132 4 1 254 73 326 2.15e-76 234
MS.gene35931.t1 MTR_2g029820 47.490 259 130 5 1 255 75 331 6.65e-73 226
MS.gene35931.t1 MTR_2g029850 48.062 258 128 5 1 254 75 330 8.00e-73 226
MS.gene35931.t1 MTR_2g040000 47.510 261 128 5 1 255 75 332 2.32e-72 224
MS.gene35931.t1 MTR_4g125940 45.946 259 132 5 1 254 19 274 2.26e-71 220
MS.gene35931.t1 MTR_5g022870 48.062 258 120 8 1 254 69 316 2.67e-71 221
MS.gene35931.t1 MTR_5g021060 48.062 258 129 5 1 255 76 331 5.05e-71 221
MS.gene35931.t1 MTR_3g092990 48.846 260 122 6 1 254 61 315 5.47e-71 220
MS.gene35931.t1 MTR_2g029800 45.946 259 134 5 1 255 75 331 9.22e-71 221
MS.gene35931.t1 MTR_3g092990 48.659 261 123 6 1 255 72 327 1.00e-70 220
MS.gene35931.t1 MTR_4g125940 45.946 259 132 5 1 254 74 329 2.39e-70 219
MS.gene35931.t1 MTR_2g029830 44.961 258 136 5 1 254 6 261 2.97e-70 218
MS.gene35931.t1 MTR_2g029815 46.124 258 133 5 1 254 75 330 4.21e-70 219
MS.gene35931.t1 MTR_8g076820 46.484 256 134 3 1 254 76 330 4.34e-70 219
MS.gene35931.t1 MTR_2g008710 46.304 257 131 4 1 254 73 325 5.96e-70 218
MS.gene35931.t1 MTR_8g075100 45.882 255 130 6 1 254 72 319 6.21e-70 218
MS.gene35931.t1 MTR_2g029830 44.961 258 136 5 1 254 74 329 1.64e-69 218
MS.gene35931.t1 MTR_1g101830 45.882 255 132 5 1 254 73 322 5.79e-69 215
MS.gene35931.t1 MTR_1g025980 44.882 254 133 6 1 253 70 317 4.40e-68 213
MS.gene35931.t1 MTR_2g028980 44.574 258 137 5 1 254 75 330 1.30e-67 213
MS.gene35931.t1 MTR_2g029860 46.512 258 132 5 1 254 75 330 4.81e-67 211
MS.gene35931.t1 MTR_1g054205 42.471 259 142 5 1 254 70 326 1.40e-66 209
MS.gene35931.t1 MTR_3g466200 45.560 259 127 7 1 254 71 320 2.79e-66 208
MS.gene35931.t1 MTR_2g008730 45.868 242 126 3 16 254 62 301 2.93e-65 205
MS.gene35931.t1 MTR_4g029180 44.186 258 131 7 1 254 73 321 3.73e-65 206
MS.gene35931.t1 MTR_2g029730 44.186 258 138 5 1 254 71 326 5.13e-65 206
MS.gene35931.t1 MTR_2g029560 43.411 258 140 5 1 254 70 325 6.06e-65 206
MS.gene35931.t1 MTR_7g029030 42.188 256 140 4 1 254 71 320 7.72e-65 205
MS.gene35931.t1 MTR_4g029170 44.186 258 131 7 1 254 73 321 1.85e-64 204
MS.gene35931.t1 MTR_3g094650 46.429 252 126 6 1 250 74 318 2.28e-64 204
MS.gene35931.t1 MTR_3g072190 42.969 256 135 5 1 254 5 251 8.62e-64 200
MS.gene35931.t1 MTR_6g027440 43.580 257 133 6 1 254 67 314 2.17e-63 201
MS.gene35931.t1 MTR_1g038680 45.594 261 132 7 1 254 75 332 5.42e-63 200
MS.gene35931.t1 MTR_5g074970 45.385 260 127 7 1 254 76 326 9.86e-63 199
MS.gene35931.t1 MTR_5g016010 42.636 258 141 5 1 253 73 328 1.03e-62 199
MS.gene35931.t1 MTR_4g114210 43.798 258 137 5 1 254 67 320 1.13e-62 199
MS.gene35931.t1 MTR_3g072190 42.969 256 135 5 1 254 72 318 1.17e-62 199
MS.gene35931.t1 MTR_7g093370 42.857 259 141 5 1 254 115 371 1.41e-62 201
MS.gene35931.t1 MTR_2g084080 43.359 256 134 5 1 254 71 317 1.94e-62 199
MS.gene35931.t1 MTR_2g084110 42.969 256 135 5 1 254 71 317 4.45e-62 197
MS.gene35931.t1 MTR_2g029740 43.411 258 140 5 1 254 75 330 7.71e-62 198
MS.gene35931.t1 MTR_2g084020 43.969 257 132 6 1 254 71 318 1.12e-61 197
MS.gene35931.t1 MTR_2g029750 43.629 259 138 6 1 254 75 330 3.35e-61 196
MS.gene35931.t1 MTR_2g029910 43.629 259 139 6 1 254 76 332 3.88e-61 196
MS.gene35931.t1 MTR_2g084010 43.750 256 134 4 1 254 71 318 5.32e-61 195
MS.gene35931.t1 MTR_2g437770 42.745 255 136 6 1 254 96 341 6.30e-61 196
MS.gene35931.t1 MTR_1g022970 44.574 258 137 5 1 254 92 347 2.06e-60 194
MS.gene35931.t1 MTR_4g029200 42.188 256 137 5 1 254 92 338 2.21e-60 194
MS.gene35931.t1 MTR_4g083710 40.856 257 144 6 1 254 73 324 2.79e-60 193
MS.gene35931.t1 MTR_4g133800 43.137 255 136 6 1 254 87 333 1.26e-59 192
MS.gene35931.t1 MTR_2g008160 43.678 261 133 6 1 254 70 323 1.79e-59 191
MS.gene35931.t1 MTR_7g072510 41.016 256 140 5 1 254 66 312 3.37e-59 190
MS.gene35931.t1 MTR_2g084090 42.802 257 135 6 1 254 71 318 5.05e-59 190
MS.gene35931.t1 MTR_1g086320 42.912 261 139 7 1 254 76 333 5.16e-59 190
MS.gene35931.t1 MTR_1g086490 41.199 267 142 6 1 254 76 340 1.87e-58 189
MS.gene35931.t1 MTR_7g072480 41.406 256 139 5 1 254 70 316 1.99e-58 188
MS.gene35931.t1 MTR_4g087965 40.927 259 144 6 1 252 88 344 3.13e-58 189
MS.gene35931.t1 MTR_1g077000 38.431 255 144 6 1 254 85 327 4.64e-58 187
MS.gene35931.t1 MTR_7g086820 38.911 257 144 6 1 254 66 312 5.86e-58 187
MS.gene35931.t1 MTR_1g009750 40.698 258 147 4 1 254 73 328 6.31e-58 187
MS.gene35931.t1 MTR_5g014100 40.755 265 141 6 1 254 72 331 2.09e-57 186
MS.gene35931.t1 MTR_0155s0040 41.406 256 135 9 1 254 73 315 4.04e-57 185
MS.gene35931.t1 MTR_4g029190 39.689 257 144 5 1 254 92 340 7.44e-57 185
MS.gene35931.t1 MTR_5g083860 41.538 260 135 7 1 254 77 325 1.55e-56 184
MS.gene35931.t1 MTR_3g094670 44.706 255 126 7 1 250 74 318 2.48e-56 183
MS.gene35931.t1 MTR_4g127670 40.310 258 146 5 1 254 70 323 3.03e-56 183
MS.gene35931.t1 MTR_4g122640 41.860 258 141 7 1 254 84 336 4.42e-56 183
MS.gene35931.t1 MTR_2g099175 38.224 259 150 5 1 254 82 335 4.77e-56 182
MS.gene35931.t1 MTR_8g062780 37.066 259 157 5 1 255 69 325 5.53e-56 182
MS.gene35931.t1 MTR_5g049280 38.931 262 149 9 1 254 79 337 6.37e-56 182
MS.gene35931.t1 MTR_4g074995 40.078 257 133 7 1 254 70 308 9.62e-56 181
MS.gene35931.t1 MTR_1g090760 37.452 259 155 5 1 254 74 330 1.44e-55 181
MS.gene35931.t1 MTR_7g086870 38.672 256 145 6 1 255 68 312 4.31e-55 179
MS.gene35931.t1 MTR_1g115900 41.085 258 139 6 1 254 73 321 5.43e-55 180
MS.gene35931.t1 MTR_5g074760 43.678 261 130 10 1 254 71 321 1.20e-54 179
MS.gene35931.t1 MTR_2g084000 39.062 256 146 4 1 254 72 319 1.49e-54 178
MS.gene35931.t1 MTR_5g074740 43.295 261 131 10 1 254 71 321 1.59e-54 178
MS.gene35931.t1 MTR_7g026990 41.797 256 137 6 1 254 77 322 2.87e-54 177
MS.gene35931.t1 MTR_6g043280 39.844 256 142 6 1 254 87 332 2.96e-54 178
MS.gene35931.t1 MTR_4g095450 40.698 258 141 6 1 253 73 323 3.68e-54 177
MS.gene35931.t1 MTR_3g094630 44.186 258 131 6 1 254 74 322 4.03e-54 177
MS.gene35931.t1 MTR_4g031140 39.453 256 148 6 1 254 74 324 5.81e-53 175
MS.gene35931.t1 MTR_4g030890 40.078 257 147 6 1 255 146 397 7.47e-53 176
MS.gene35931.t1 MTR_2g067440 36.879 282 148 3 1 253 106 386 2.22e-52 175
MS.gene35931.t1 MTR_5g074860 42.366 262 130 10 1 253 75 324 3.07e-52 172
MS.gene35931.t1 MTR_5g074710 39.615 260 142 9 1 254 71 321 9.94e-51 169
MS.gene35931.t1 MTR_6g043240 40.698 258 135 8 1 254 88 331 8.86e-50 167
MS.gene35931.t1 MTR_3g467600 39.231 260 144 8 1 254 73 324 4.78e-49 164
MS.gene35931.t1 MTR_2g077990 36.396 283 147 5 1 251 122 403 6.53e-49 166
MS.gene35931.t1 MTR_4g074990 37.066 259 135 7 1 254 70 305 9.78e-49 163
MS.gene35931.t1 MTR_3g466180 39.453 256 144 5 1 254 77 323 1.67e-48 163
MS.gene35931.t1 MTR_2g067450 38.372 258 150 4 1 253 56 309 1.06e-47 160
MS.gene35931.t1 MTR_1g009750 37.402 254 144 4 1 254 73 311 2.39e-47 159
MS.gene35931.t1 MTR_3g105790 39.844 256 148 4 1 254 71 322 1.43e-46 158
MS.gene35931.t1 MTR_2g078610 35.336 283 150 5 1 251 122 403 2.18e-46 159
MS.gene35931.t1 MTR_6g043460 36.047 258 152 7 1 255 82 329 2.31e-46 158
MS.gene35931.t1 MTR_0286s0010 36.680 259 154 7 1 254 81 334 5.53e-46 157
MS.gene35931.t1 MTR_6g008075 36.680 259 154 7 1 254 81 334 5.53e-46 157
MS.gene35931.t1 MTR_2g008160 38.697 261 111 6 1 254 70 288 2.45e-44 151
MS.gene35931.t1 MTR_3g105790 40.496 242 138 4 16 254 8 246 4.27e-44 149
MS.gene35931.t1 MTR_4g132110 36.680 259 149 8 2 254 79 328 8.46e-44 151
MS.gene35931.t1 MTR_0147s0010 34.127 252 143 4 22 253 133 381 9.34e-44 152
MS.gene35931.t1 MTR_2g078280 35.662 272 142 5 1 240 122 392 1.12e-43 152
MS.gene35931.t1 MTR_4g074980 38.672 256 123 8 1 254 71 294 1.94e-43 149
MS.gene35931.t1 MTR_5g074700 40.598 234 114 9 24 254 3 214 1.56e-42 144
MS.gene35931.t1 MTR_4g132110 35.985 264 149 9 2 254 79 333 2.00e-41 145
MS.gene35931.t1 MTR_1g066710 34.630 257 157 5 2 254 74 323 3.88e-40 141
MS.gene35931.t1 MTR_2g029880 42.132 197 100 5 60 254 4 188 4.21e-40 138
MS.gene35931.t1 MTR_4g132490 32.692 260 162 5 1 254 75 327 7.04e-40 140
MS.gene35931.t1 MTR_4g074980 41.176 187 104 4 1 185 71 253 1.73e-39 137
MS.gene35931.t1 MTR_1g066380 32.685 257 162 5 2 254 6 255 9.33e-38 133
MS.gene35931.t1 MTR_2g008160 55.556 126 52 3 1 126 70 191 3.84e-37 130
MS.gene35931.t1 MTR_1g066380 32.685 257 162 5 2 254 74 323 5.99e-37 133
MS.gene35931.t1 MTR_1g066680 32.946 258 162 5 1 254 72 322 6.71e-36 130
MS.gene35931.t1 MTR_5g033470 32.567 261 167 6 1 254 119 377 8.95e-36 131
MS.gene35931.t1 MTR_1g066640 32.685 257 162 5 2 254 74 323 2.25e-35 129
MS.gene35931.t1 MTR_3g072210 38.342 193 108 5 64 254 55 238 1.70e-34 124
MS.gene35931.t1 MTR_7g072490 33.475 236 92 6 1 234 2 174 2.23e-32 118
MS.gene35931.t1 MTR_5g074860 33.716 261 115 9 1 253 75 285 8.94e-29 110
MS.gene35931.t1 MTR_7g086790 34.518 197 102 6 2 195 17 189 1.34e-27 105
MS.gene35931.t1 MTR_2g078560 28.028 289 160 5 10 251 30 317 1.19e-26 105
MS.gene35931.t1 MTR_2g077980 29.758 289 161 8 6 255 1 286 1.39e-26 104
MS.gene35931.t1 MTR_5g058120 31.548 168 102 4 83 250 1 155 1.60e-17 79.7
MS.gene35931.t1 MTR_7g107500 43.373 83 45 1 172 254 17 97 1.80e-17 75.9
MS.gene35931.t1 MTR_7g086785 47.945 73 37 1 1 72 4 76 8.28e-16 72.4
MS.gene35931.t1 MTR_6g048160 55.000 60 25 1 1 60 29 86 4.19e-15 69.3
MS.gene35931.t1 MTR_1g089005 58.065 62 25 1 5 65 71 132 5.59e-14 68.2
MS.gene35931.t1 MTR_4g114220 41.346 104 47 5 1 100 49 142 2.18e-13 66.2
MS.gene35931.t1 MTR_3g072260 56.452 62 25 2 1 60 72 133 4.14e-13 65.5
MS.gene35931.t1 MTR_4g031040 49.180 61 31 0 63 123 25 85 2.64e-12 62.8
MS.gene35931.t1 MTR_1g098320 43.750 80 42 2 176 254 47 124 1.66e-11 60.8
MS.gene35931.t1 MTR_6g071110 35.577 104 55 2 10 113 70 161 2.94e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35931.t1 AT1G05260 69.804 255 77 0 1 255 72 326 5.93e-134 381
MS.gene35931.t1 AT4G11290 70.312 256 74 1 1 254 71 326 1.11e-132 377
MS.gene35931.t1 AT3G21770 67.460 252 82 0 1 252 75 326 1.43e-126 362
MS.gene35931.t1 AT5G15180 55.512 254 111 2 1 254 78 329 8.65e-98 289
MS.gene35931.t1 AT3G01190 57.480 254 104 3 1 254 72 321 1.20e-95 283
MS.gene35931.t1 AT1G05240 51.172 256 121 4 1 254 72 325 3.30e-85 257
MS.gene35931.t1 AT1G05250 51.172 256 121 4 1 254 72 325 3.30e-85 257
MS.gene35931.t1 AT2G18150 46.512 258 133 5 1 255 82 337 5.43e-74 229
MS.gene35931.t1 AT4G36430 45.736 258 135 5 1 255 76 331 9.00e-73 226
MS.gene35931.t1 AT2G39040 50.382 262 119 9 1 254 92 350 1.13e-71 223
MS.gene35931.t1 AT5G14130 45.703 256 134 4 1 254 78 330 3.88e-71 221
MS.gene35931.t1 AT5G14130 45.703 256 134 4 1 254 119 371 1.28e-70 221
MS.gene35931.t1 AT5G64120 45.276 254 133 5 1 254 81 328 1.49e-69 217
MS.gene35931.t1 AT2G18140 43.798 258 140 5 1 255 81 336 3.46e-69 216
MS.gene35931.t1 AT1G49570 45.136 257 134 6 1 252 94 348 3.28e-68 214
MS.gene35931.t1 AT5G66390 46.124 258 134 5 1 255 79 334 4.22e-68 214
MS.gene35931.t1 AT5G06730 43.023 258 141 5 1 254 79 334 1.96e-66 210
MS.gene35931.t1 AT3G50990 44.358 257 140 3 1 255 87 342 4.96e-66 209
MS.gene35931.t1 AT5G39580 43.922 255 136 6 1 254 71 319 1.49e-65 207
MS.gene35931.t1 AT2G38390 44.015 259 138 6 1 254 77 333 4.30e-65 206
MS.gene35931.t1 AT5G51890 46.124 258 128 8 1 254 72 322 1.57e-64 204
MS.gene35931.t1 AT3G03670 41.569 255 146 3 1 254 69 321 2.02e-64 204
MS.gene35931.t1 AT5G06720 43.023 258 141 5 1 254 78 333 3.10e-64 204
MS.gene35931.t1 AT2G41480 43.798 258 137 5 1 254 75 328 3.12e-64 203
MS.gene35931.t1 AT5G17820 42.520 254 136 4 1 254 70 313 5.40e-63 200
MS.gene35931.t1 AT5G42180 41.732 254 141 5 1 253 69 316 1.23e-62 199
MS.gene35931.t1 AT3G32980 40.996 261 146 6 1 255 77 335 5.81e-62 198
MS.gene35931.t1 AT5G17820 42.520 254 136 4 1 254 123 366 9.93e-62 198
MS.gene35931.t1 AT2G38380 42.471 259 142 6 1 254 77 333 1.10e-61 197
MS.gene35931.t1 AT1G44970 44.574 258 137 5 1 254 91 346 4.18e-61 196
MS.gene35931.t1 AT5G64110 40.625 256 145 4 1 254 80 330 2.41e-60 194
MS.gene35931.t1 AT4G08770 41.762 261 144 6 1 255 70 328 2.55e-60 194
MS.gene35931.t1 AT3G49110 41.762 261 144 6 1 255 79 337 4.31e-60 194
MS.gene35931.t1 AT2G24800 40.467 257 146 4 1 254 77 329 5.27e-60 192
MS.gene35931.t1 AT5G19890 41.538 260 140 7 1 255 76 328 8.78e-60 192
MS.gene35931.t1 AT3G49120 41.379 261 145 6 1 255 78 336 9.12e-60 193
MS.gene35931.t1 AT5G58390 42.969 256 130 8 1 250 67 312 1.31e-59 191
MS.gene35931.t1 AT5G05340 41.634 257 139 5 1 254 76 324 1.52e-59 191
MS.gene35931.t1 AT1G77100 42.248 258 137 5 1 254 70 319 1.01e-58 189
MS.gene35931.t1 AT4G33420 40.392 255 139 6 1 254 83 325 1.51e-57 186
MS.gene35931.t1 AT4G25980 40.154 259 146 5 1 254 72 326 4.08e-57 185
MS.gene35931.t1 AT4G33420 40.392 255 139 6 1 254 130 372 5.31e-57 186
MS.gene35931.t1 AT4G08780 40.613 261 147 6 1 255 70 328 3.19e-56 183
MS.gene35931.t1 AT5G19880 41.762 261 143 6 1 254 71 329 3.57e-56 183
MS.gene35931.t1 AT2G18980 40.310 258 145 5 1 254 71 323 3.85e-56 182
MS.gene35931.t1 AT5G64100 40.856 257 141 6 1 254 83 331 4.02e-56 183
MS.gene35931.t1 AT1G71695 42.248 258 137 7 1 254 90 339 4.49e-56 183
MS.gene35931.t1 AT4G31760 41.762 261 136 8 1 254 75 326 5.64e-56 182
MS.gene35931.t1 AT1G14550 39.922 258 143 7 1 254 72 321 1.42e-55 181
MS.gene35931.t1 AT2G35380 38.258 264 149 5 1 254 76 335 3.01e-55 181
MS.gene35931.t1 AT4G37530 40.769 260 145 6 1 254 73 329 1.28e-54 179
MS.gene35931.t1 AT5G24070 38.077 260 148 6 1 254 83 335 2.38e-54 178
MS.gene35931.t1 AT1G14540 38.521 257 147 6 1 254 67 315 4.54e-54 177
MS.gene35931.t1 AT4G16270 39.300 257 149 6 1 254 96 348 3.06e-53 176
MS.gene35931.t1 AT2G22420 38.672 256 150 6 1 254 69 319 3.25e-53 175
MS.gene35931.t1 AT5G58400 41.016 256 135 8 1 250 76 321 3.44e-53 175
MS.gene35931.t1 AT5G22410 38.824 255 144 7 1 250 74 321 4.11e-53 175
MS.gene35931.t1 AT2G43480 37.209 258 153 4 1 254 83 335 4.27e-53 175
MS.gene35931.t1 AT1G68850 35.632 261 160 6 1 254 76 335 5.04e-53 175
MS.gene35931.t1 AT4G33870 35.540 287 147 5 1 251 114 398 8.40e-53 176
MS.gene35931.t1 AT1G30870 39.300 257 147 5 1 255 97 346 1.04e-52 174
MS.gene35931.t1 AT5G67400 38.224 259 153 5 1 254 73 329 1.27e-52 174
MS.gene35931.t1 AT2G35380 37.751 249 142 4 15 254 3 247 3.29e-52 170
MS.gene35931.t1 AT4G37520 39.231 260 149 6 1 254 73 329 8.05e-52 172
MS.gene35931.t1 AT2G34060 38.281 256 151 4 1 250 88 342 1.16e-51 172
MS.gene35931.t1 AT4G17690 38.224 259 147 7 1 254 72 322 2.02e-51 171
MS.gene35931.t1 AT4G26010 38.132 257 143 7 1 255 68 310 4.59e-51 169
MS.gene35931.t1 AT4G26010 38.132 257 143 7 1 255 96 338 6.96e-51 169
MS.gene35931.t1 AT4G30170 36.822 258 154 5 1 254 73 325 5.59e-50 167
MS.gene35931.t1 AT4G37520 39.231 260 146 7 1 254 73 326 5.92e-50 167
MS.gene35931.t1 AT5G47000 38.403 263 144 8 1 255 79 331 2.28e-49 166
MS.gene35931.t1 AT3G49960 36.680 259 157 5 1 254 73 329 4.88e-49 164
MS.gene35931.t1 AT1G34510 36.187 257 148 7 1 255 68 310 1.07e-46 158
MS.gene35931.t1 AT1G24110 35.000 260 160 5 1 255 68 323 3.44e-45 154
MS.gene35931.t1 AT5G40150 35.409 257 157 4 1 254 78 328 9.03e-45 153
MS.gene35931.t1 AT4G37530 40.000 210 120 4 1 205 73 281 1.37e-44 152
MS.gene35931.t1 AT4G21960 34.630 257 157 6 2 254 78 327 5.32e-44 151
MS.gene35931.t1 AT3G28200 35.271 258 155 6 1 254 67 316 5.72e-43 148
MS.gene35931.t1 AT3G17070 32.946 258 167 5 1 254 21 276 2.42e-39 138
MS.gene35931.t1 AT3G17070 32.946 258 167 5 1 254 84 339 1.04e-38 138
MS.gene35931.t1 AT2G37130 32.946 258 161 6 2 254 46 296 3.27e-36 130
MS.gene35931.t1 AT2G37130 32.946 258 161 6 2 254 77 327 6.52e-36 130
MS.gene35931.t1 AT4G25980 41.212 165 88 4 1 159 117 278 7.78e-32 119
MS.gene35931.t1 AT5G39580 50.413 121 57 2 1 121 71 188 1.62e-30 114
MS.gene35931.t1 AT2G24800 44.068 118 64 1 1 118 77 192 4.97e-26 102
MS.gene35931.t1 AT3G42570 37.168 113 69 2 10 120 37 149 4.48e-16 73.6

Find 0 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACCTGAAAAAATTTAAATCA+TGG + 15123:17444-17463 MS.gene35931:intergenic 20.0%
!! TTCCAGTAAAATTGTATAAA+CGG + 15123:17508-17527 MS.gene35931:intergenic 20.0%
!!! ACCATGATTTAAATTTTTTC+AGG - 15123:17440-17459 MS.gene35931:CDS 20.0%
!!! TTATACAATTTTACTGGAAA+GGG - 15123:17509-17528 MS.gene35931:CDS 20.0%
!!! TTTATACAATTTTACTGGAA+AGG - 15123:17508-17527 MS.gene35931:CDS 20.0%
! ATTCTATCTTTAACAGACTA+AGG - 15123:17007-17026 MS.gene35931:CDS 25.0%
!! AACCGTTTATACAATTTTAC+TGG - 15123:17503-17522 MS.gene35931:CDS 25.0%
!! TTTTAAATCAAGTCCTTGAT+TGG + 15123:17260-17279 MS.gene35931:intergenic 25.0%
AGCTTATCTACTGATACATT+TGG - 15123:17097-17116 MS.gene35931:CDS 30.0%
ATAGAATTGAGTACTTACTG+TGG + 15123:16994-17013 MS.gene35931:intergenic 30.0%
CAATACTACAATAGTCGAAA+TGG - 15123:17604-17623 MS.gene35931:intron 30.0%
GACAAGTTAAAGTTAAGACA+GGG - 15123:17810-17829 MS.gene35931:CDS 30.0%
GCAAAATCAATGGAGAAAAT+GGG - 15123:17788-17807 MS.gene35931:CDS 30.0%
GTTTGAAAATGATGTGCAAA+GGG + 15123:17486-17505 MS.gene35931:intergenic 30.0%
TGCAAAATCAATGGAGAAAA+TGG - 15123:17787-17806 MS.gene35931:CDS 30.0%
TGCTGAATTTGCAAAATCAA+TGG - 15123:17778-17797 MS.gene35931:CDS 30.0%
TGTGCACTTGTAAATAACTA+AGG - 15123:17857-17876 MS.gene35931:CDS 30.0%
TTAAATAAGCCAATCCAAAC+AGG + 15123:17033-17052 MS.gene35931:intergenic 30.0%
! ATTTGGTGATTTGTGATTTC+AGG - 15123:17114-17133 MS.gene35931:CDS 30.0%
! TTTGGTGATTTGTGATTTCA+GGG - 15123:17115-17134 MS.gene35931:CDS 30.0%
! TTTTCCGTCTCTAATTATGT+CGG + 15123:17378-17397 MS.gene35931:intergenic 30.0%
AAGCCTCTAACAGTAAGATT+TGG + 15123:16870-16889 MS.gene35931:intergenic 35.0%
AGTCGAAACACATTTGATCT+TGG - 15123:17635-17654 MS.gene35931:intron 35.0%
ATCAAATGTGTTTCGACTTC+CGG + 15123:17633-17652 MS.gene35931:intergenic 35.0%
GCATATTCACTATCAAGTGA+TGG + 15123:17545-17564 MS.gene35931:intergenic 35.0%
GGACAAGTTAAAGTTAAGAC+AGG - 15123:17809-17828 MS.gene35931:CDS 35.0%
GGTTTGAAAATGATGTGCAA+AGG + 15123:17487-17506 MS.gene35931:intergenic 35.0%
GTTACCGACATAATTAGAGA+CGG - 15123:17371-17390 MS.gene35931:intron 35.0%
TGAATGTAGTATTACCAGAG+AGG + 15123:17294-17313 MS.gene35931:intergenic 35.0%
!! GTTGGTTTGTTGAGTTCAAA+AGG + 15123:16827-16846 MS.gene35931:intergenic 35.0%
!!! AATTTTCAAGTGAGCCTTGA+AGG + 15123:17754-17773 MS.gene35931:intergenic 35.0%
!!! GAGCATTTTTTTCAGCTTGT+TGG + 15123:16845-16864 MS.gene35931:intergenic 35.0%
AAAGTTAAGACAGGGTCACA+AGG - 15123:17818-17837 MS.gene35931:CDS 40.0%
ATGTAGTATTACCAGAGAGG+AGG + 15123:17291-17310 MS.gene35931:intergenic 40.0%
ATTGGCAAAGAGAGTTTGGA+GGG + 15123:17242-17261 MS.gene35931:intergenic 40.0%
CAAACTCTCTTTGCCAATCA+AGG - 15123:17244-17263 MS.gene35931:intron 40.0%
CCATATTGGAAAGTTCCAAC+AGG - 15123:17142-17161 MS.gene35931:CDS 40.0%
CCTCCAAATCTTACTGTTAG+AGG - 15123:16864-16883 MS.gene35931:CDS 40.0%
CCTCTAACAGTAAGATTTGG+AGG + 15123:16867-16886 MS.gene35931:intergenic 40.0%
CCTGTTGGAACTTTCCAATA+TGG + 15123:17145-17164 MS.gene35931:intergenic 40.0%
CTTGATTGGCAAAGAGAGTT+TGG + 15123:17246-17265 MS.gene35931:intergenic 40.0%
CTTGTGACTCAATTCCTTCA+AGG - 15123:17737-17756 MS.gene35931:CDS 40.0%
GAAAGTTCCAACAGGTAGAA+GGG - 15123:17150-17169 MS.gene35931:CDS 40.0%
TCAAATGTGTTTCGACTTCC+GGG + 15123:17632-17651 MS.gene35931:intergenic 40.0%
TGGAGTCGTATCGAATTTGT+TGG - 15123:17174-17193 MS.gene35931:CDS 40.0%
TTAACAGACTAAGGCCTGTT+TGG - 15123:17016-17035 MS.gene35931:CDS 40.0%
! AGTCAAGTTGTCAAGAGAAG+AGG - 15123:17665-17684 MS.gene35931:intron 40.0%
! GACGACGGTGCATAATTTTA+AGG + 15123:17324-17343 MS.gene35931:intergenic 40.0%
!!! TTTTCAGGTGCTCACACAAT+TGG - 15123:17455-17474 MS.gene35931:CDS 40.0%
AAAGACTTAGTCCTCCTCTC+TGG - 15123:17277-17296 MS.gene35931:intron 45.0%
ACAATAGTCGAAATGGACCC+CGG - 15123:17611-17630 MS.gene35931:intron 45.0%
AGACTAAGGCCTGTTTGGAT+TGG - 15123:17021-17040 MS.gene35931:CDS 45.0%
AGGGTGGTGAAGTTGGAAAA+TGG + 15123:17223-17242 MS.gene35931:intergenic 45.0%
CAAATGTGTTTCGACTTCCG+GGG + 15123:17631-17650 MS.gene35931:intergenic 45.0%
CAGCACAAGAAACAACACCA+GGG + 15123:16935-16954 MS.gene35931:intergenic 45.0%
GATTGGCAAAGAGAGTTTGG+AGG + 15123:17243-17262 MS.gene35931:intergenic 45.0%
GATTTCAGGGTGGTCCATAT+TGG - 15123:17128-17147 MS.gene35931:CDS 45.0%
GGAAAGTTCCAACAGGTAGA+AGG - 15123:17149-17168 MS.gene35931:CDS 45.0%
GTGAAGTTGGAAAATGGAGC+AGG + 15123:17217-17236 MS.gene35931:intergenic 45.0%
TCAGCACAAGAAACAACACC+AGG + 15123:16936-16955 MS.gene35931:intergenic 45.0%
! GGTGATTTGTGATTTCAGGG+TGG - 15123:17118-17137 MS.gene35931:CDS 45.0%
ACTCCATCCCTTCTACCTGT+TGG + 15123:17160-17179 MS.gene35931:intergenic 50.0%
AGTTTGGAGGGTGGTGAAGT+TGG + 15123:17230-17249 MS.gene35931:intergenic 50.0%
CAGGGTCACAAGGTGTGATT+AGG - 15123:17828-17847 MS.gene35931:CDS 50.0%
CTTGTTGAAGCTGAATGCCC+TGG - 15123:16915-16934 MS.gene35931:CDS 50.0%
GTTCCAACAGGTAGAAGGGA+TGG - 15123:17154-17173 MS.gene35931:CDS 50.0%
TGAATTAGCGTGCACGACGA+CGG + 15123:17339-17358 MS.gene35931:intergenic 50.0%
TGTGGCTGCAATAGAGTCTC+TGG + 15123:16976-16995 MS.gene35931:intergenic 50.0%
! CAGGGCATTCAGCTTCAACA+AGG + 15123:16917-16936 MS.gene35931:intergenic 50.0%
GGCAAAGAGAGTTTGGAGGG+TGG + 15123:17239-17258 MS.gene35931:intergenic 55.0%


Chromosome Type Strat End Strand Name
15123 gene 16807 17877 16807 ID=MS.gene35931
15123 mRNA 16807 17877 16807 ID=MS.gene35931.t1;Parent=MS.gene35931
15123 exon 17689 17877 17689 ID=MS.gene35931.t1.exon1;Parent=MS.gene35931.t1
15123 CDS 17689 17877 17689 ID=cds.MS.gene35931.t1;Parent=MS.gene35931.t1
15123 exon 17386 17548 17386 ID=MS.gene35931.t1.exon2;Parent=MS.gene35931.t1
15123 CDS 17386 17548 17386 ID=cds.MS.gene35931.t1;Parent=MS.gene35931.t1
15123 exon 16807 17222 16807 ID=MS.gene35931.t1.exon3;Parent=MS.gene35931.t1
15123 CDS 16807 17222 16807 ID=cds.MS.gene35931.t1;Parent=MS.gene35931.t1
Gene Sequence

>MS.gene35931

GGATGTGATGGATCAGTCCTTTTGAACTCAACAAACCAACAAGCTGAAAAAAATGCTCCTCCAAATCTTACTGTTAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGTGTTGTTTCTTGTGCTGATATCATAGCTTTATCTGCCAGAGACTCTATTGCAGCCACAGTAAGTACTCAATTCTATCTTTAACAGACTAAGGCCTGTTTGGATTGGCTTATTTAAGCTTATCTACTGTTTATAAGCTCTTTAAGTAGCTTAAGATTGCAAGCTTATCTACTGATACATTTGGTGATTTGTGATTTCAGGGTGGTCCATATTGGAAAGTTCCAACAGGTAGAAGGGATGGAGTCGTATCGAATTTGTTGGAAGCAAATCAAAACATTCCTGCTCCATTTTCCAACTTCACCACCCTCCAAACTCTCTTTGCCAATCAAGGACTTGATTTAAAAGACTTAGTCCTCCTCTCTGGTAATACTACATTCAACAATTTCCTTAAAATTATGCACCGTCGTCGTGCACGCTAATTCATTACTAGAAAATGTTACCGACATAATTAGAGACGGAAAAAATGAAATAATTAGTGACACATTTTTATTTCAATTTTTGATGACCATGATTTAAATTTTTTCAGGTGCTCACACAATTGGTATCTCCCTTTGCACATCATTTTCAAACCGTTTATACAATTTTACTGGAAAGGGTGATCAAGATCCATCACTTGATAGTGAATATGCACAAAATCTAAAGACTTTCAAGTGCAAGAACATCAATGACAATACTACAATAGTCGAAATGGACCCCGGAAGTCGAAACACATTTGATCTTGGTTACTATAGTCAAGTTGTCAAGAGAAGAGGTTTGTTTCAGTCTGATTCTGCATTGTTGACAAATTCAGTTACAAAAGCTCTTGTGACTCAATTCCTTCAAGGCTCACTTGAAAATTTCTATGCTGAATTTGCAAAATCAATGGAGAAAATGGGACAAGTTAAAGTTAAGACAGGGTCACAAGGTGTGATTAGGAAGCATTGTGCACTTGTAAATAACTAA

Protein sequence

>MS.gene35931.t1

GCDGSVLLNSTNQQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADIIALSARDSIAATGGPYWKVPTGRRDGVVSNLLEANQNIPAPFSNFTTLQTLFANQGLDLKDLVLLSGAHTIGISLCTSFSNRLYNFTGKGDQDPSLDSEYAQNLKTFKCKNINDNTTIVEMDPGSRNTFDLGYYSQVVKRRGLFQSDSALLTNSVTKALVTQFLQGSLENFYAEFAKSMEKMGQVKVKTGSQGVIRKHCALVNN