AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80170.t1 MTR_3g105790 97.170 318 8 1 1 317 7 324 0.0 632
MS.gene80170.t1 MTR_3g105790 97.984 248 4 1 71 317 1 248 1.69e-180 498
MS.gene80170.t1 MTR_7g029030 41.250 320 175 4 1 315 9 320 1.35e-84 258
MS.gene80170.t1 MTR_5g022870 41.158 311 172 7 9 315 13 316 9.24e-80 245
MS.gene80170.t1 MTR_8g075100 40.984 305 171 4 14 315 21 319 6.58e-78 241
MS.gene80170.t1 MTR_2g008710 42.679 321 174 5 1 315 9 325 7.51e-77 238
MS.gene80170.t1 MTR_1g025980 39.365 315 180 6 1 311 7 314 3.47e-76 236
MS.gene80170.t1 MTR_1g101830 40.190 316 180 5 3 315 13 322 9.02e-76 235
MS.gene80170.t1 MTR_1g009750 39.385 325 184 6 2 315 6 328 1.44e-73 230
MS.gene80170.t1 MTR_3g092990 39.498 319 185 5 3 315 10 326 3.10e-73 229
MS.gene80170.t1 MTR_2g084080 39.130 322 180 4 1 315 5 317 2.59e-72 226
MS.gene80170.t1 MTR_5g021060 41.667 300 165 5 23 315 34 330 1.58e-71 224
MS.gene80170.t1 MTR_7g107520 40.683 322 178 7 1 315 5 320 1.21e-70 222
MS.gene80170.t1 MTR_4g095450 39.803 304 168 6 17 312 25 321 3.84e-70 221
MS.gene80170.t1 MTR_7g086820 39.869 306 166 7 17 315 18 312 5.87e-70 220
MS.gene80170.t1 MTR_4g046713 39.117 317 170 6 12 315 20 326 6.68e-70 220
MS.gene80170.t1 MTR_2g084090 38.629 321 180 5 3 315 7 318 7.62e-70 220
MS.gene80170.t1 MTR_5g014100 40.523 306 173 5 19 315 26 331 9.45e-70 220
MS.gene80170.t1 MTR_5g017860 40.373 322 181 7 1 315 9 326 1.35e-69 219
MS.gene80170.t1 MTR_5g017850 39.875 321 184 6 1 315 9 326 3.41e-69 218
MS.gene80170.t1 MTR_7g086870 39.404 302 168 5 18 315 21 311 3.55e-69 218
MS.gene80170.t1 MTR_2g088770 40.584 308 176 5 13 315 20 325 4.92e-69 218
MS.gene80170.t1 MTR_2g099175 39.748 317 180 6 6 315 23 335 6.10e-69 218
MS.gene80170.t1 MTR_2g084110 38.438 320 181 4 3 315 7 317 7.23e-69 217
MS.gene80170.t1 MTR_4g087965 38.080 323 162 6 13 312 36 343 1.07e-68 218
MS.gene80170.t1 MTR_8g076820 39.869 306 174 5 17 315 28 330 3.40e-68 216
MS.gene80170.t1 MTR_5g016010 37.304 319 189 6 2 312 11 326 3.52e-68 216
MS.gene80170.t1 MTR_4g125940 38.957 326 181 8 2 315 10 329 4.73e-68 216
MS.gene80170.t1 MTR_4g114210 39.871 311 172 6 14 315 16 320 1.69e-67 214
MS.gene80170.t1 MTR_4g122640 40.000 305 173 4 17 315 36 336 2.24e-67 214
MS.gene80170.t1 MTR_4g127670 40.268 298 171 4 23 315 28 323 2.47e-67 214
MS.gene80170.t1 MTR_2g028980 38.957 326 182 7 2 315 10 330 5.40e-67 214
MS.gene80170.t1 MTR_2g029860 39.441 322 182 6 1 315 15 330 1.18e-66 213
MS.gene80170.t1 MTR_1g086320 38.344 326 181 8 5 315 13 333 3.07e-66 211
MS.gene80170.t1 MTR_2g029820 39.482 309 176 6 16 315 24 330 4.90e-66 211
MS.gene80170.t1 MTR_1g054205 40.397 302 168 6 23 315 28 326 6.30e-66 210
MS.gene80170.t1 MTR_2g029830 39.274 303 173 5 17 311 26 325 1.07e-65 210
MS.gene80170.t1 MTR_2g029815 38.558 319 183 6 7 315 15 330 1.34e-65 210
MS.gene80170.t1 MTR_5g074970 35.692 325 189 6 1 315 12 326 1.75e-65 209
MS.gene80170.t1 MTR_2g029560 39.934 303 171 5 17 311 22 321 1.89e-65 209
MS.gene80170.t1 MTR_3g072190 37.500 320 186 3 1 315 8 318 2.77e-65 208
MS.gene80170.t1 MTR_2g029750 39.032 310 178 5 14 315 24 330 3.00e-65 209
MS.gene80170.t1 MTR_3g094650 38.080 323 178 7 1 315 14 322 8.19e-65 207
MS.gene80170.t1 MTR_1g077000 38.487 304 165 7 19 315 39 327 8.30e-65 207
MS.gene80170.t1 MTR_2g084000 36.646 322 186 5 3 315 7 319 1.23e-64 206
MS.gene80170.t1 MTR_1g038680 39.935 308 162 10 23 315 33 332 1.77e-64 206
MS.gene80170.t1 MTR_2g084010 36.449 321 187 5 3 315 7 318 2.01e-64 206
MS.gene80170.t1 MTR_2g084020 36.760 321 186 5 3 315 7 318 2.63e-64 206
MS.gene80170.t1 MTR_7g093370 38.689 305 177 6 19 315 69 371 6.15e-64 206
MS.gene80170.t1 MTR_2g029800 38.667 300 175 4 23 315 33 330 1.34e-63 205
MS.gene80170.t1 MTR_6g027440 37.500 320 189 7 1 316 3 315 2.41e-63 203
MS.gene80170.t1 MTR_2g029850 39.482 309 176 6 16 315 24 330 2.68e-63 204
MS.gene80170.t1 MTR_5g083860 35.913 323 189 5 1 315 13 325 6.01e-63 202
MS.gene80170.t1 MTR_1g086490 36.446 332 190 8 5 317 13 342 7.31e-63 202
MS.gene80170.t1 MTR_6g043280 35.737 319 190 5 2 315 24 332 8.44e-63 202
MS.gene80170.t1 MTR_2g029740 37.578 322 190 5 3 315 11 330 1.07e-62 202
MS.gene80170.t1 MTR_3g466200 34.365 323 188 6 1 315 14 320 1.67e-62 201
MS.gene80170.t1 MTR_3g092990 37.304 319 181 6 3 315 10 315 1.79e-62 201
MS.gene80170.t1 MTR_1g009750 36.533 323 179 7 2 315 6 311 4.51e-62 199
MS.gene80170.t1 MTR_4g132490 36.393 305 180 6 19 315 29 327 7.47e-62 199
MS.gene80170.t1 MTR_0155s0040 32.710 321 197 6 2 315 7 315 1.26e-61 199
MS.gene80170.t1 MTR_4g029190 36.859 312 180 5 12 315 38 340 1.50e-61 199
MS.gene80170.t1 MTR_6g043460 37.231 325 181 7 4 315 14 328 2.92e-61 199
MS.gene80170.t1 MTR_6g043240 36.585 328 184 7 2 315 14 331 6.13e-61 198
MS.gene80170.t1 MTR_4g083710 36.503 326 186 6 1 315 9 324 2.03e-60 196
MS.gene80170.t1 MTR_2g029730 38.235 306 180 5 17 315 23 326 2.56e-60 196
MS.gene80170.t1 MTR_1g090760 34.663 326 199 7 1 317 12 332 4.39e-60 195
MS.gene80170.t1 MTR_1g022970 38.487 304 178 5 19 315 46 347 4.73e-60 196
MS.gene80170.t1 MTR_4g029170 36.646 322 187 6 2 315 9 321 5.13e-60 195
MS.gene80170.t1 MTR_2g008160 39.088 307 174 6 17 315 22 323 6.31e-60 194
MS.gene80170.t1 MTR_2g040000 36.842 304 176 7 23 315 33 331 8.26e-60 194
MS.gene80170.t1 MTR_4g029200 36.184 304 180 3 17 315 44 338 4.66e-59 192
MS.gene80170.t1 MTR_4g125940 40.876 274 145 7 53 315 7 274 8.34e-59 190
MS.gene80170.t1 MTR_4g074995 37.152 323 169 8 4 315 9 308 3.44e-58 189
MS.gene80170.t1 MTR_0286s0010 35.294 323 196 7 1 315 17 334 6.04e-58 190
MS.gene80170.t1 MTR_6g008075 35.294 323 196 7 1 315 17 334 6.04e-58 190
MS.gene80170.t1 MTR_7g072510 33.962 318 196 4 3 315 4 312 5.00e-57 187
MS.gene80170.t1 MTR_4g133800 37.710 297 175 6 24 317 46 335 7.00e-57 187
MS.gene80170.t1 MTR_3g094670 35.913 323 185 6 1 315 14 322 8.61e-57 186
MS.gene80170.t1 MTR_2g029910 36.842 304 182 5 22 317 33 334 2.76e-56 186
MS.gene80170.t1 MTR_3g467600 36.420 324 187 7 2 315 10 324 3.99e-56 185
MS.gene80170.t1 MTR_8g062780 34.259 324 198 7 1 315 7 324 6.93e-56 184
MS.gene80170.t1 MTR_3g466180 37.304 319 184 5 2 315 16 323 1.04e-55 184
MS.gene80170.t1 MTR_2g437770 37.333 300 177 7 19 315 50 341 1.73e-55 184
MS.gene80170.t1 MTR_4g132110 33.739 329 196 7 2 315 7 328 1.51e-54 181
MS.gene80170.t1 MTR_2g008730 36.957 322 167 7 1 315 9 301 3.51e-54 179
MS.gene80170.t1 MTR_4g029180 35.216 301 179 5 22 315 30 321 1.76e-53 178
MS.gene80170.t1 MTR_7g026990 34.694 294 177 4 23 311 35 318 2.32e-53 177
MS.gene80170.t1 MTR_3g094630 34.796 319 190 5 5 315 14 322 2.92e-53 177
MS.gene80170.t1 MTR_7g072480 32.166 314 189 5 12 315 17 316 1.08e-52 176
MS.gene80170.t1 MTR_5g049280 34.740 308 187 7 19 315 33 337 1.81e-52 176
MS.gene80170.t1 MTR_5g033470 35.197 304 183 8 23 315 77 377 1.91e-52 177
MS.gene80170.t1 MTR_4g132110 33.234 334 196 8 2 315 7 333 3.08e-52 175
MS.gene80170.t1 MTR_5g074710 35.185 324 189 8 3 315 8 321 5.20e-52 174
MS.gene80170.t1 MTR_2g029830 39.922 258 140 6 64 311 5 257 7.71e-52 172
MS.gene80170.t1 MTR_4g031140 34.062 320 201 8 1 315 10 324 7.73e-52 174
MS.gene80170.t1 MTR_5g074760 34.365 323 192 7 3 315 9 321 1.13e-51 173
MS.gene80170.t1 MTR_4g030890 33.974 312 192 8 11 315 92 396 1.49e-51 175
MS.gene80170.t1 MTR_4g074990 34.628 309 167 7 17 315 22 305 7.02e-51 171
MS.gene80170.t1 MTR_1g115900 35.077 325 189 9 1 315 9 321 9.37e-51 171
MS.gene80170.t1 MTR_5g074740 34.985 323 190 7 3 315 9 321 2.67e-50 169
MS.gene80170.t1 MTR_1g066710 33.660 306 189 5 17 315 25 323 3.06e-50 169
MS.gene80170.t1 MTR_1g066680 34.304 309 182 6 17 315 25 322 1.19e-49 168
MS.gene80170.t1 MTR_5g074860 34.675 323 189 8 1 311 9 321 1.26e-49 168
MS.gene80170.t1 MTR_1g066640 33.981 309 184 6 17 315 25 323 1.51e-49 167
MS.gene80170.t1 MTR_3g072190 37.597 258 147 3 63 315 3 251 2.69e-49 165
MS.gene80170.t1 MTR_2g067440 33.435 329 184 6 17 312 58 384 4.75e-49 168
MS.gene80170.t1 MTR_1g066380 34.405 311 180 8 17 315 25 323 1.59e-48 165
MS.gene80170.t1 MTR_2g008160 34.314 306 155 5 17 315 22 288 3.71e-47 160
MS.gene80170.t1 MTR_4g074980 38.017 242 135 3 14 248 20 253 1.04e-46 158
MS.gene80170.t1 MTR_4g074980 33.871 310 162 8 14 315 20 294 1.95e-45 156
MS.gene80170.t1 MTR_2g078610 32.132 333 186 8 17 312 74 403 2.71e-45 159
MS.gene80170.t1 MTR_2g077990 32.432 333 185 8 17 312 74 403 2.79e-45 159
MS.gene80170.t1 MTR_2g078280 32.609 322 178 7 17 302 74 392 2.09e-44 156
MS.gene80170.t1 MTR_0147s0010 32.595 316 178 7 19 312 77 379 9.06e-43 151
MS.gene80170.t1 MTR_2g008160 45.455 176 94 2 17 191 22 196 1.36e-42 146
MS.gene80170.t1 MTR_2g067450 37.946 224 129 5 17 234 9 228 9.11e-38 137
MS.gene80170.t1 MTR_1g066380 33.962 265 151 8 63 315 3 255 6.39e-37 133
MS.gene80170.t1 MTR_5g074860 27.864 323 172 8 1 311 9 282 3.16e-28 110
MS.gene80170.t1 MTR_5g074700 33.761 234 125 8 90 317 7 216 5.43e-28 108
MS.gene80170.t1 MTR_3g072210 34.715 193 114 3 126 315 55 238 1.22e-26 105
MS.gene80170.t1 MTR_2g029880 34.500 200 116 5 121 317 3 190 2.45e-26 103
MS.gene80170.t1 MTR_7g086790 33.673 196 104 5 66 258 17 189 4.40e-26 102
MS.gene80170.t1 MTR_3g072260 40.476 126 71 1 1 122 8 133 6.33e-23 92.8
MS.gene80170.t1 MTR_5g058120 37.821 156 83 4 159 313 15 157 8.99e-22 92.8
MS.gene80170.t1 MTR_7g072490 30.638 235 96 8 65 295 2 173 6.93e-20 86.7
MS.gene80170.t1 MTR_4g114220 50.617 81 34 1 44 124 28 102 1.40e-19 84.0
MS.gene80170.t1 MTR_6g048160 56.923 65 28 0 58 122 22 86 4.79e-19 80.9
MS.gene80170.t1 MTR_7g086810 35.593 118 54 1 17 134 4 99 5.45e-19 84.7
MS.gene80170.t1 MTR_1g089005 41.026 117 60 3 19 126 15 131 1.66e-16 75.9
MS.gene80170.t1 MTR_3g107060 25.000 256 138 8 53 301 108 316 1.07e-15 76.6
MS.gene80170.t1 MTR_7g086785 34.906 106 51 2 65 167 4 94 6.73e-15 70.9
MS.gene80170.t1 MTR_4g012865 41.791 67 36 1 19 82 77 143 2.49e-13 67.0
MS.gene80170.t1 MTR_2g077980 24.910 277 167 10 74 312 8 281 1.45e-11 64.3
MS.gene80170.t1 MTR_4g031040 29.771 131 67 4 123 250 23 131 2.00e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80170.t1 AT2G24800 64.452 301 105 2 17 315 29 329 3.13e-146 415
MS.gene80170.t1 AT4G31760 60.000 315 125 1 2 315 12 326 5.51e-145 411
MS.gene80170.t1 AT2G24800 69.512 164 50 0 17 180 29 192 6.02e-84 253
MS.gene80170.t1 AT5G14130 42.679 321 175 6 1 315 13 330 1.48e-82 253
MS.gene80170.t1 AT5G14130 42.679 321 175 6 1 315 54 371 4.98e-82 253
MS.gene80170.t1 AT5G64120 45.667 300 158 3 17 315 33 328 1.18e-80 248
MS.gene80170.t1 AT5G51890 43.506 308 162 7 9 308 12 315 1.71e-80 247
MS.gene80170.t1 AT5G39580 44.407 295 158 4 23 315 29 319 3.56e-75 234
MS.gene80170.t1 AT5G42180 41.270 315 175 6 1 311 5 313 5.00e-75 233
MS.gene80170.t1 AT1G77100 40.557 323 173 7 3 315 6 319 3.14e-74 231
MS.gene80170.t1 AT2G18980 41.853 313 172 6 9 315 15 323 5.63e-74 231
MS.gene80170.t1 AT1G05260 42.122 311 169 6 12 315 19 325 2.86e-73 229
MS.gene80170.t1 AT4G37530 41.479 311 166 6 16 315 24 329 2.90e-73 229
MS.gene80170.t1 AT5G66390 42.000 300 164 5 23 315 37 333 2.94e-73 229
MS.gene80170.t1 AT3G21770 41.830 306 171 6 12 312 22 325 1.86e-72 227
MS.gene80170.t1 AT3G49960 40.498 321 180 7 3 315 12 329 5.13e-71 223
MS.gene80170.t1 AT4G25980 42.071 309 163 7 17 315 24 326 7.98e-71 223
MS.gene80170.t1 AT2G18150 39.344 305 175 5 18 315 35 336 2.63e-70 222
MS.gene80170.t1 AT4G37520 41.042 307 171 6 17 315 25 329 4.26e-70 221
MS.gene80170.t1 AT2G18140 40.065 307 170 7 18 315 34 335 7.60e-70 221
MS.gene80170.t1 AT4G11290 41.368 307 169 6 17 315 23 326 8.59e-70 220
MS.gene80170.t1 AT5G64110 41.121 321 177 7 1 315 16 330 6.66e-69 218
MS.gene80170.t1 AT4G36430 39.667 300 171 6 23 315 34 330 1.03e-68 218
MS.gene80170.t1 AT5G64100 43.098 297 159 6 23 315 41 331 2.18e-68 216
MS.gene80170.t1 AT4G17690 38.065 310 178 5 13 315 20 322 6.30e-68 215
MS.gene80170.t1 AT5G67400 39.938 323 179 9 3 315 12 329 1.00e-67 215
MS.gene80170.t1 AT5G24070 40.000 305 171 5 19 315 35 335 1.02e-67 215
MS.gene80170.t1 AT4G37520 40.717 307 169 7 17 315 25 326 1.15e-67 214
MS.gene80170.t1 AT5G15180 38.462 325 183 8 2 315 11 329 1.89e-67 214
MS.gene80170.t1 AT3G50990 40.193 311 177 6 11 315 34 341 2.50e-67 214
MS.gene80170.t1 AT4G30170 38.889 306 179 5 15 315 23 325 2.68e-67 214
MS.gene80170.t1 AT4G33420 39.145 304 163 7 19 315 37 325 3.02e-67 213
MS.gene80170.t1 AT2G41480 39.803 304 164 7 23 315 33 328 8.06e-67 213
MS.gene80170.t1 AT4G33420 39.145 304 163 7 19 315 84 372 1.23e-66 213
MS.gene80170.t1 AT3G03670 37.855 317 189 4 3 315 9 321 2.86e-66 211
MS.gene80170.t1 AT2G34060 37.952 332 183 8 1 311 13 342 5.57e-66 211
MS.gene80170.t1 AT1G14550 38.769 325 177 7 2 315 8 321 1.45e-65 209
MS.gene80170.t1 AT2G43480 36.808 307 180 6 18 315 34 335 1.73e-65 209
MS.gene80170.t1 AT1G14540 36.760 321 185 5 1 315 7 315 1.78e-65 209
MS.gene80170.t1 AT5G17820 37.580 314 185 5 3 315 10 313 6.55e-65 207
MS.gene80170.t1 AT3G01190 40.000 310 165 10 16 315 23 321 8.43e-65 207
MS.gene80170.t1 AT1G71695 37.419 310 179 6 13 315 38 339 8.94e-65 208
MS.gene80170.t1 AT5G19890 37.662 308 183 5 13 315 24 327 2.86e-64 206
MS.gene80170.t1 AT5G17820 37.580 314 185 5 3 315 63 366 4.26e-64 207
MS.gene80170.t1 AT5G47000 37.107 318 187 5 5 315 19 330 5.39e-64 205
MS.gene80170.t1 AT4G26010 38.438 320 174 8 1 315 8 309 5.66e-64 204
MS.gene80170.t1 AT4G26010 38.558 319 173 8 2 315 37 337 1.13e-63 205
MS.gene80170.t1 AT1G34510 37.299 311 176 6 10 315 13 309 1.14e-63 204
MS.gene80170.t1 AT4G16270 38.961 308 168 7 19 315 50 348 1.25e-62 202
MS.gene80170.t1 AT1G30870 39.535 301 172 5 19 315 51 345 1.43e-62 202
MS.gene80170.t1 AT4G08770 38.658 313 181 6 12 315 17 327 1.98e-62 202
MS.gene80170.t1 AT4G37530 41.985 262 137 5 16 267 24 280 2.47e-62 199
MS.gene80170.t1 AT1G44970 40.453 309 175 5 14 315 40 346 2.64e-62 201
MS.gene80170.t1 AT4G08780 38.658 313 181 6 12 315 17 327 6.37e-62 200
MS.gene80170.t1 AT2G35380 37.954 303 179 4 23 316 34 336 7.60e-62 200
MS.gene80170.t1 AT1G49570 38.978 313 167 6 15 312 44 347 1.56e-61 199
MS.gene80170.t1 AT5G05340 36.570 309 178 6 15 315 26 324 2.43e-61 198
MS.gene80170.t1 AT1G05240 37.013 308 175 7 19 315 26 325 4.56e-61 197
MS.gene80170.t1 AT1G05250 37.013 308 175 7 19 315 26 325 4.56e-61 197
MS.gene80170.t1 AT2G39040 39.677 310 171 8 18 315 45 350 9.34e-61 197
MS.gene80170.t1 AT5G19880 35.077 325 196 6 2 315 9 329 1.28e-60 196
MS.gene80170.t1 AT3G49110 39.073 302 173 6 23 315 37 336 2.16e-60 197
MS.gene80170.t1 AT1G24110 37.152 323 185 8 3 315 8 322 2.25e-60 196
MS.gene80170.t1 AT5G06730 36.957 322 190 7 2 315 18 334 3.24e-60 196
MS.gene80170.t1 AT5G40150 38.387 310 169 6 17 315 30 328 1.24e-59 194
MS.gene80170.t1 AT3G28200 36.422 313 176 6 14 315 16 316 2.64e-59 193
MS.gene80170.t1 AT5G06720 36.957 322 190 6 2 315 17 333 2.69e-59 193
MS.gene80170.t1 AT3G32980 36.741 313 186 6 13 315 24 334 6.59e-59 193
MS.gene80170.t1 AT5G58400 36.013 311 182 5 13 315 24 325 5.01e-58 190
MS.gene80170.t1 AT5G58390 36.218 312 182 5 12 315 14 316 7.86e-58 189
MS.gene80170.t1 AT3G49120 37.748 302 177 6 23 315 36 335 8.45e-57 187
MS.gene80170.t1 AT3G17070 35.974 303 179 5 19 311 38 335 1.41e-56 186
MS.gene80170.t1 AT4G21960 34.615 312 190 5 11 315 23 327 2.75e-56 185
MS.gene80170.t1 AT2G38390 35.202 321 198 6 3 315 15 333 1.16e-54 182
MS.gene80170.t1 AT5G22410 37.417 302 178 6 19 314 28 324 2.91e-54 180
MS.gene80170.t1 AT1G68850 33.025 324 204 5 3 315 14 335 8.23e-54 179
MS.gene80170.t1 AT4G33870 33.433 335 182 6 17 312 66 398 1.11e-53 181
MS.gene80170.t1 AT2G38380 34.891 321 199 6 3 315 15 333 1.92e-53 179
MS.gene80170.t1 AT2G22420 33.956 321 196 9 3 315 7 319 7.96e-52 174
MS.gene80170.t1 AT2G37130 35.331 317 186 7 8 315 21 327 1.98e-51 172
MS.gene80170.t1 AT2G37130 35.526 304 179 6 21 315 1 296 1.25e-50 170
MS.gene80170.t1 AT5G39580 49.689 161 80 1 23 183 29 188 3.62e-46 156
MS.gene80170.t1 AT4G25980 47.647 170 81 4 17 182 69 234 3.89e-45 155
MS.gene80170.t1 AT2G35380 36.885 244 149 3 78 316 5 248 6.29e-43 148
MS.gene80170.t1 AT3G17070 34.545 275 164 6 47 311 4 272 7.38e-41 144
MS.gene80170.t1 AT4G08390 28.000 200 116 8 108 301 185 362 1.48e-14 73.9
MS.gene80170.t1 AT4G08390 28.000 200 116 8 108 301 186 363 1.62e-14 73.9
MS.gene80170.t1 AT4G08390 28.000 200 116 8 108 301 186 363 1.62e-14 73.9
MS.gene80170.t1 AT4G08390 28.000 200 116 8 108 301 186 363 1.62e-14 73.9

Find 63 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGATCTTGTGGTTCTTTC+AGG 0.062320 3.4:-92379500 MS.gene80170:intron
CAGCTCATTGCAACACATTC+AGG 0.242894 3.4:-92378870 MS.gene80170:CDS
ACGGATGGTTGTGCATTTAT+TGG 0.252981 3.4:+92378757 None:intergenic
TCAAATAGCATAGACGTTTC+AGG 0.291753 3.4:+92378718 None:intergenic
GACTTCCATTTCTGTCTTGT+TGG 0.319000 3.4:+92378839 None:intergenic
ACCATGCGAAGGAGCTTTCC+AGG 0.352693 3.4:+92381113 None:intergenic
AAGTAAGGACAATCCTTTAC+TGG 0.356162 3.4:+92379520 None:intergenic
TCAAACGATCCTTCCATTCC+TGG 0.360199 3.4:-92381131 MS.gene80170:CDS
CAAGAAGATTTCTGTAGTAT+TGG 0.379224 3.4:+92378692 None:intergenic
CTCAGTCTTTACCCCGATAC+TGG 0.391758 3.4:+92378540 None:intergenic
TCTGCACAAGAAACAGTTCC+TGG 0.392995 3.4:+92379796 None:intergenic
CATAATTAGTATCAATGGTT+TGG 0.404838 3.4:+92378803 None:intergenic
ATCAGCATAATTAGTATCAA+TGG 0.413882 3.4:+92378798 None:intergenic
GTTCTTGAGGTGTTCTGCCC+AGG 0.436046 3.4:-92379814 MS.gene80170:CDS
AAACTAGTGTCCACAATGTT+GGG 0.456366 3.4:+92379572 None:intergenic
TTCGTAAAGCTAACCAGTAT+CGG 0.459764 3.4:-92378553 MS.gene80170:CDS
TCGTAAAGCTAACCAGTATC+GGG 0.462963 3.4:-92378552 MS.gene80170:CDS
CGTTTCCAACAAGACAGAAA+TGG 0.463042 3.4:-92378844 MS.gene80170:CDS
TTTGCAGGGGCTCATACAAT+AGG 0.464251 3.4:-92378895 MS.gene80170:intron
ATCCAGGAAATAGATCTGTT+GGG 0.465371 3.4:-92379867 MS.gene80170:CDS
TAACCTCTACAAAGCAATCA+TGG 0.472084 3.4:+92381087 None:intergenic
CTTATGATTAACTCTGCTGT+TGG 0.485784 3.4:+92381176 None:intergenic
TCCTGGAAAGCTCCTTCGCA+TGG 0.487831 3.4:-92381114 MS.gene80170:CDS
CCTGTAGGAATCTGAACCCT+TGG 0.487984 3.4:+92379635 None:intergenic
AAAACTAGTGTCCACAATGT+TGG 0.491591 3.4:+92379571 None:intergenic
GCGAAGGAGCTTTCCAGGAA+TGG 0.495018 3.4:+92381118 None:intergenic
CCAAGGGTTCAGATTCCTAC+AGG 0.501809 3.4:-92379635 MS.gene80170:CDS
TTTCCATGATTGCTTTGTAG+AGG 0.503451 3.4:-92381090 MS.gene80170:intron
AATACAGAACAAAGTGATCC+AGG 0.505659 3.4:-92379883 MS.gene80170:CDS
GATCCAGGAAATAGATCTGT+TGG 0.507049 3.4:-92379868 MS.gene80170:CDS
ATTGTCCTTACTTGATCTTG+TGG 0.511927 3.4:-92379510 MS.gene80170:CDS
AAGAACCACAAGATCAAGTA+AGG 0.515531 3.4:+92379505 None:intergenic
AGCTCATTGCAACACATTCA+GGG 0.538111 3.4:-92378869 MS.gene80170:CDS
ATTCCTACAGGTAGGAGAGA+TGG 0.545064 3.4:-92379623 MS.gene80170:CDS
CGCTTTGTGAAGCAGGCTGG+TGG 0.545142 3.4:-92379659 MS.gene80170:intron
TGAAGCAGGCTGGTGGACCA+AGG 0.551386 3.4:-92379652 MS.gene80170:intron
TACAGGTAGGAGAGATGGAA+TGG 0.551892 3.4:-92379618 MS.gene80170:CDS
TCATCAAAACTGAATCAGAC+TGG 0.560337 3.4:+92378653 None:intergenic
AGGATCGATGTTCACTGCCA+CGG 0.580331 3.4:+92378738 None:intergenic
TCCAGGAAATAGATCTGTTG+GGG 0.586806 3.4:-92379866 MS.gene80170:CDS
TCGATGTTCACTGCCACGGA+TGG 0.590989 3.4:+92378742 None:intergenic
ATTCCATCTCTCCTACCTGT+AGG 0.594277 3.4:+92379620 None:intergenic
AGGAGCTTTCCAGGAATGGA+AGG 0.600921 3.4:+92381122 None:intergenic
GATGCATCTTTGATGCTACA+AGG 0.603118 3.4:-92379910 MS.gene80170:CDS
GAAGCAGGCTGGTGGACCAA+GGG 0.604686 3.4:-92379651 MS.gene80170:intron
AGCAAGATTAGAAGTTACAG+AGG 0.604742 3.4:+92381223 None:intergenic
AACAGCTAAAAGAGTTCTTG+AGG 0.607173 3.4:-92379827 MS.gene80170:CDS
CTGCACAAGAAACAGTTCCT+GGG 0.613867 3.4:+92379797 None:intergenic
TGATAGCACGAGGAAGCTAG+TGG 0.616101 3.4:-92378626 MS.gene80170:CDS
AATAAATGCACAACCATCCG+TGG 0.629289 3.4:-92378755 MS.gene80170:CDS
AATGGAAGGATCGTTTGAAG+AGG 0.631778 3.4:+92381136 None:intergenic
AAATGTTAGACCCAACATTG+TGG 0.635934 3.4:-92379582 MS.gene80170:CDS
ATCGGGGTAAAGACTGAGGA+GGG 0.637032 3.4:-92378535 MS.gene80170:CDS
AATCATGGAAAACCATGCGA+AGG 0.639071 3.4:+92381102 None:intergenic
TATCGGGGTAAAGACTGAGG+AGG 0.659570 3.4:-92378536 MS.gene80170:CDS
CGTAAAGCTAACCAGTATCG+GGG 0.667609 3.4:-92378551 MS.gene80170:CDS
GCTCATTGCAACACATTCAG+GGG 0.678269 3.4:-92378868 MS.gene80170:CDS
GGGTTCAGATTCCTACAGGT+AGG 0.678330 3.4:-92379631 MS.gene80170:CDS
ATGCATCTTTGATGCTACAA+GGG 0.681664 3.4:-92379909 MS.gene80170:CDS
CAGTATCGGGGTAAAGACTG+AGG 0.702027 3.4:-92378539 MS.gene80170:CDS
TAGCACGAGGAAGCTAGTGG+AGG 0.707430 3.4:-92378623 MS.gene80170:CDS
TGATGAACGATGATAGCACG+AGG 0.718494 3.4:-92378636 MS.gene80170:CDS
CCAGGAAATAGATCTGTTGG+GGG 0.740691 3.4:-92379865 MS.gene80170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTCTAAAATTATTCATATTA+CGG - chr3.4:92379284-92379303 MS.gene80170:intron 15.0%
!! AATAATCTTATTGCATCAAA+AGG + chr3.4:92379806-92379825 None:intergenic 20.0%
!! AATTAGATGTGAAATCAAAT+CGG + chr3.4:92379397-92379416 None:intergenic 20.0%
!! CAAAATTTAGAAAGAGAAAT+AGG + chr3.4:92380719-92380738 None:intergenic 20.0%
!! TATAAACTACTAGATATATG+TGG + chr3.4:92380593-92380612 None:intergenic 20.0%
!!! AAGATTATTATTTGAAATGC+AGG - chr3.4:92379817-92379836 MS.gene80170:CDS 20.0%
!!! AGATTATTATTTGAAATGCA+GGG - chr3.4:92379818-92379837 MS.gene80170:CDS 20.0%
!!! ATATTTTTGTCTAATACACT+TGG + chr3.4:92380752-92380771 None:intergenic 20.0%
!!! CCAACTAATGTTTTAAAAAT+TGG + chr3.4:92380696-92380715 None:intergenic 20.0%
!!! CCAATTTTTAAAACATTAGT+TGG - chr3.4:92380693-92380712 MS.gene80170:intron 20.0%
!!! CGTAATATGAATAATTTTAG+AGG + chr3.4:92379286-92379305 None:intergenic 20.0%
!!! CTATTTCTCTTTCTAAATTT+TGG - chr3.4:92380717-92380736 MS.gene80170:intron 20.0%
!!! TAATGTTTTAAAAATTGGAC+CGG + chr3.4:92380691-92380710 None:intergenic 20.0%
!!! TGTATAAATAGTTGACATTT+TGG + chr3.4:92379498-92379517 None:intergenic 20.0%
! ACTTGATGTGAAATTCAAAT+TGG - chr3.4:92378917-92378936 MS.gene80170:intron 25.0%
! ATCAGCATAATTAGTATCAA+TGG + chr3.4:92380960-92380979 None:intergenic 25.0%
! ATTAGATGTGAAATCAAATC+GGG + chr3.4:92379396-92379415 None:intergenic 25.0%
! CATAATTAGTATCAATGGTT+TGG + chr3.4:92380955-92380974 None:intergenic 25.0%
! TTTACCATATCAGATATATG+TGG + chr3.4:92380547-92380566 None:intergenic 25.0%
!! AAGAACTTTTCTTTGACAAT+TGG - chr3.4:92381170-92381189 MS.gene80170:CDS 25.0%
!! AGAACTTTTCTTTGACAATT+GGG - chr3.4:92381171-92381190 MS.gene80170:CDS 25.0%
!! ATCACAAATTATTTCTCTCT+TGG + chr3.4:92379458-92379477 None:intergenic 25.0%
!!! ACCAAAATGTGTTACTTTAT+GGG + chr3.4:92380378-92380397 None:intergenic 25.0%
!!! ATAAAGTAACACATTTTGGT+CGG - chr3.4:92380378-92380397 MS.gene80170:intron 25.0%
!!! TTTTCTGAATATTTTGAGTC+CGG - chr3.4:92380669-92380688 MS.gene80170:intron 25.0%
AACTACTAGATATATGTGGA+TGG + chr3.4:92380589-92380608 None:intergenic 30.0%
ACATGTTTATGTCTGATTGA+AGG + chr3.4:92380052-92380071 None:intergenic 30.0%
ACTAATAGTTAAGCTTTGCA+GGG - chr3.4:92380846-92380865 MS.gene80170:intron 30.0%
AGATATATGACGATAAGTGT+GGG - chr3.4:92379432-92379451 MS.gene80170:intron 30.0%
CAAGAAGATTTCTGTAGTAT+TGG + chr3.4:92381066-92381085 None:intergenic 30.0%
CATAAGCTCTCTTATGAAAA+CGG - chr3.4:92378787-92378806 MS.gene80170:CDS 30.0%
CTAAAAATAGCTTATGCACA+TGG + chr3.4:92378759-92378778 None:intergenic 30.0%
TACTAATAGTTAAGCTTTGC+AGG - chr3.4:92380845-92380864 MS.gene80170:intron 30.0%
TGAACGATGATTATAGTTGA+AGG - chr3.4:92380510-92380529 MS.gene80170:intron 30.0%
TTAGATGTGAAATCAAATCG+GGG + chr3.4:92379395-92379414 None:intergenic 30.0%
! AGATAGTGAGGTATCATAAT+CGG - chr3.4:92379736-92379755 MS.gene80170:intron 30.0%
! ATCCAGGATTTTTGAATAGT+GGG - chr3.4:92379223-92379242 MS.gene80170:intron 30.0%
! CAGACATAAACATGTCTTTT+TGG - chr3.4:92380057-92380076 MS.gene80170:intron 30.0%
! GAACTTTTCTTTGACAATTG+GGG - chr3.4:92381172-92381191 MS.gene80170:CDS 30.0%
! GGATAATATAAGAAGTGCAA+TGG + chr3.4:92380031-92380050 None:intergenic 30.0%
! TCCCATAAAGTAACACATTT+TGG - chr3.4:92380374-92380393 MS.gene80170:intron 30.0%
! TGTTTCTAAAAACTCTGTGT+GGG - chr3.4:92379536-92379555 MS.gene80170:CDS 30.0%
!! GACCAAAATGTGTTACTTTA+TGG + chr3.4:92380379-92380398 None:intergenic 30.0%
!! TTGTTTCTAAAAACTCTGTG+TGG - chr3.4:92379535-92379554 MS.gene80170:CDS 30.0%
!!! ATATGTTTTGGTTCTAAGTG+TGG - chr3.4:92378989-92379008 MS.gene80170:intron 30.0%
!!! TATGTTTTGGTTCTAAGTGT+GGG - chr3.4:92378990-92379009 MS.gene80170:intron 30.0%
AAAACTAGTGTCCACAATGT+TGG + chr3.4:92380187-92380206 None:intergenic 35.0%
AAACTAGTGTCCACAATGTT+GGG + chr3.4:92380186-92380205 None:intergenic 35.0%
AAATGTTAGACCCAACATTG+TGG - chr3.4:92380173-92380192 MS.gene80170:intron 35.0%
AACAGCTAAAAGAGTTCTTG+AGG - chr3.4:92379928-92379947 MS.gene80170:intron 35.0%
AAGAACCACAAGATCAAGTA+AGG + chr3.4:92380253-92380272 None:intergenic 35.0%
AAGTAAGGACAATCCTTTAC+TGG + chr3.4:92380238-92380257 None:intergenic 35.0%
AATACAGAACAAAGTGATCC+AGG - chr3.4:92379872-92379891 MS.gene80170:CDS 35.0%
AGCAAGATTAGAAGTTACAG+AGG + chr3.4:92378535-92378554 None:intergenic 35.0%
ATCCAGGAAATAGATCTGTT+GGG - chr3.4:92379888-92379907 MS.gene80170:CDS 35.0%
ATGCATCTTTGATGCTACAA+GGG - chr3.4:92379846-92379865 MS.gene80170:CDS 35.0%
ATGCATGCTATAGAGTTTGT+GGG + chr3.4:92379568-92379587 None:intergenic 35.0%
ATTGTCCTTACTTGATCTTG+TGG - chr3.4:92380245-92380264 MS.gene80170:intron 35.0%
CAGTCCACATATATCTGATA+TGG - chr3.4:92380540-92380559 MS.gene80170:intron 35.0%
CTAATAGTTAAGCTTTGCAG+GGG - chr3.4:92380847-92380866 MS.gene80170:intron 35.0%
CTTATGATTAACTCTGCTGT+TGG + chr3.4:92378582-92378601 None:intergenic 35.0%
GAACCAAAACATATGATGCA+TGG + chr3.4:92378983-92379002 None:intergenic 35.0%
GAGATATATGACGATAAGTG+TGG - chr3.4:92379431-92379450 MS.gene80170:intron 35.0%
TAACCTCTACAAAGCAATCA+TGG + chr3.4:92378671-92378690 None:intergenic 35.0%
TCAAATAGCATAGACGTTTC+AGG + chr3.4:92381040-92381059 None:intergenic 35.0%
TCATCAAAACTGAATCAGAC+TGG + chr3.4:92381105-92381124 None:intergenic 35.0%
TGACTTAGATAGTGCTTGTA+AGG - chr3.4:92379053-92379072 MS.gene80170:intron 35.0%
TGTCAAATACCGACAAGTAT+TGG + chr3.4:92379611-92379630 None:intergenic 35.0%
TTAGTGCTTCATAGATAGTG+AGG - chr3.4:92379724-92379743 MS.gene80170:intron 35.0%
TTCGTAAAGCTAACCAGTAT+CGG - chr3.4:92381202-92381221 MS.gene80170:CDS 35.0%
TTTCCATGATTGCTTTGTAG+AGG - chr3.4:92378665-92378684 MS.gene80170:CDS 35.0%
! ACAAAATGACTTGCAAGATC+CGG + chr3.4:92379089-92379108 None:intergenic 35.0%
! AGTCCATGCATCATATGTTT+TGG - chr3.4:92378977-92378996 MS.gene80170:intron 35.0%
! ATATGATGCATGGACTAACT+CGG + chr3.4:92378973-92378992 None:intergenic 35.0%
! ATCAGATATATGTGGACTGA+GGG + chr3.4:92380539-92380558 None:intergenic 35.0%
! CGTTTTCATAAGAGAGCTTA+TGG + chr3.4:92378789-92378808 None:intergenic 35.0%
! CTTAAGCTCTTTTCCAGTAA+AGG - chr3.4:92380222-92380241 MS.gene80170:intron 35.0%
! GATCCAGGATTTTTGAATAG+TGG - chr3.4:92379222-92379241 MS.gene80170:intron 35.0%
! TATCAGATATATGTGGACTG+AGG + chr3.4:92380540-92380559 None:intergenic 35.0%
! TCCAGGATTTTTGAATAGTG+GGG - chr3.4:92379224-92379243 MS.gene80170:intron 35.0%
!! GATCTTGCAAGTCATTTTGT+AGG - chr3.4:92379089-92379108 MS.gene80170:intron 35.0%
!! TATTCAGAAAACCGACTTGA+AGG + chr3.4:92380660-92380679 None:intergenic 35.0%
!! TCACATCAAGTAGTCTTGTT+TGG + chr3.4:92378908-92378927 None:intergenic 35.0%
!! TGAAGTTTTGATGACCTTAG+AGG - chr3.4:92379146-92379165 MS.gene80170:intron 35.0%
!!! ATGTTTTGGTTCTAAGTGTG+GGG - chr3.4:92378991-92379010 MS.gene80170:intron 35.0%
!!! CACTGCACTTTTTTTTACAC+TGG - chr3.4:92379760-92379779 MS.gene80170:CDS 35.0%
!!! TGTGGACACTAGTTTTACTA+TGG - chr3.4:92380191-92380210 MS.gene80170:intron 35.0%
AATAAATGCACAACCATCCG+TGG - chr3.4:92381000-92381019 MS.gene80170:intron 40.0%
AATCATGGAAAACCATGCGA+AGG + chr3.4:92378656-92378675 None:intergenic 40.0%
AATGGAAGGATCGTTTGAAG+AGG + chr3.4:92378622-92378641 None:intergenic 40.0%
ACCAAGCAAATGACATTCTG+TGG - chr3.4:92378711-92378730 MS.gene80170:CDS 40.0%
ACGGATGGTTGTGCATTTAT+TGG + chr3.4:92381001-92381020 None:intergenic 40.0%
ACTATTGCATGCAACCTCTA+AGG + chr3.4:92379163-92379182 None:intergenic 40.0%
AGCTCATTGCAACACATTCA+GGG - chr3.4:92380886-92380905 MS.gene80170:intron 40.0%
ATATATGTGGATGGCGCAAT+AGG + chr3.4:92380580-92380599 None:intergenic 40.0%
CATGACACTGAAGTTGACAT+TGG + chr3.4:92379689-92379708 None:intergenic 40.0%
CCAAGCAAATGACATTCTGT+GGG - chr3.4:92378712-92378731 MS.gene80170:CDS 40.0%
CGTTTCCAACAAGACAGAAA+TGG - chr3.4:92380911-92380930 MS.gene80170:intron 40.0%
CTAGTGCTATGTTCAAGTCT+TGG + chr3.4:92380333-92380352 None:intergenic 40.0%
CTTGATCTTGTGGTTCTTTC+AGG - chr3.4:92380255-92380274 MS.gene80170:intron 40.0%
GACTTCCATTTCTGTCTTGT+TGG + chr3.4:92380919-92380938 None:intergenic 40.0%
GATCCAGGAAATAGATCTGT+TGG - chr3.4:92379887-92379906 MS.gene80170:CDS 40.0%
GATGCATCTTTGATGCTACA+AGG - chr3.4:92379845-92379864 MS.gene80170:CDS 40.0%
GATGCATGCTATAGAGTTTG+TGG + chr3.4:92379569-92379588 None:intergenic 40.0%
GTACTCTCAACATGTCAAGA+TGG + chr3.4:92380468-92380487 None:intergenic 40.0%
GTTGAGTGTCCAATACTTGT+CGG - chr3.4:92379599-92379618 MS.gene80170:CDS 40.0%
TCCAGGAAATAGATCTGTTG+GGG - chr3.4:92379889-92379908 MS.gene80170:CDS 40.0%
TCGTAAAGCTAACCAGTATC+GGG - chr3.4:92381203-92381222 MS.gene80170:CDS 40.0%
! CCAGGATTTTTGAATAGTGG+GGG - chr3.4:92379225-92379244 MS.gene80170:intron 40.0%
!! ACATGTTGAGAGTACTACGT+TGG - chr3.4:92380473-92380492 MS.gene80170:intron 40.0%
ATTCCATCTCTCCTACCTGT+AGG + chr3.4:92380138-92380157 None:intergenic 45.0%
ATTCCTACAGGTAGGAGAGA+TGG - chr3.4:92380132-92380151 MS.gene80170:intron 45.0%
CACTGCTCAACACATCGTAT+TGG + chr3.4:92379199-92379218 None:intergenic 45.0%
CAGCTCATTGCAACACATTC+AGG - chr3.4:92380885-92380904 MS.gene80170:intron 45.0%
CCAGGAAATAGATCTGTTGG+GGG - chr3.4:92379890-92379909 MS.gene80170:CDS 45.0%
CCCCCACTATTCAAAAATCC+TGG + chr3.4:92379228-92379247 None:intergenic 45.0%
CGTAAAGCTAACCAGTATCG+GGG - chr3.4:92381204-92381223 MS.gene80170:CDS 45.0%
CTGCACAAGAAACAGTTCCT+GGG + chr3.4:92379961-92379980 None:intergenic 45.0%
CTTGTAAGGTTTGAGCAGTC+CGG - chr3.4:92379067-92379086 MS.gene80170:intron 45.0%
GAAATCAAATCGGGGATGAC+TGG + chr3.4:92379387-92379406 None:intergenic 45.0%
GCTCATTGCAACACATTCAG+GGG - chr3.4:92380887-92380906 MS.gene80170:intron 45.0%
GTATTGGACACTCAACACCA+GGG + chr3.4:92379595-92379614 None:intergenic 45.0%
TACAGGTAGGAGAGATGGAA+TGG - chr3.4:92380137-92380156 MS.gene80170:intron 45.0%
TACGATGTGTTGAGCAGTGA+CGG - chr3.4:92379200-92379219 MS.gene80170:intron 45.0%
TCAAACGATCCTTCCATTCC+TGG - chr3.4:92378624-92378643 MS.gene80170:CDS 45.0%
TCTGCACAAGAAACAGTTCC+TGG + chr3.4:92379962-92379981 None:intergenic 45.0%
TGAAAGACGCTTTGTGAAGC+AGG - chr3.4:92380089-92380108 MS.gene80170:intron 45.0%
TGATGAACGATGATAGCACG+AGG - chr3.4:92381119-92381138 MS.gene80170:CDS 45.0%
TGCTCAACACATCGTATTGG+TGG + chr3.4:92379196-92379215 None:intergenic 45.0%
TTTGCAGGGGCTCATACAAT+AGG - chr3.4:92380860-92380879 MS.gene80170:intron 45.0%
! AGTATTGGACACTCAACACC+AGG + chr3.4:92379596-92379615 None:intergenic 45.0%
! CCCACAGAATGTCATTTGCT+TGG + chr3.4:92378715-92378734 None:intergenic 45.0%
! TCTGGCTTGAGGAATGTGTT+GGG - chr3.4:92380631-92380650 MS.gene80170:intron 45.0%
ACACTGACACGACATGCATG+TGG - chr3.4:92379628-92379647 MS.gene80170:CDS 50.0%
AGGAGCTTTCCAGGAATGGA+AGG + chr3.4:92378636-92378655 None:intergenic 50.0%
AGGATCGATGTTCACTGCCA+CGG + chr3.4:92381020-92381039 None:intergenic 50.0%
ATCGGGGTAAAGACTGAGGA+GGG - chr3.4:92381220-92381239 MS.gene80170:CDS 50.0%
CAAGCCAGAGACTAGACATC+TGG + chr3.4:92380620-92380639 None:intergenic 50.0%
CACTCCAGATGTCTAGTCTC+TGG - chr3.4:92380613-92380632 MS.gene80170:intron 50.0%
CCAAGGGTTCAGATTCCTAC+AGG - chr3.4:92380120-92380139 MS.gene80170:intron 50.0%
CCCCCAACAGATCTATTTCC+TGG + chr3.4:92379893-92379912 None:intergenic 50.0%
CCTGTAGGAATCTGAACCCT+TGG + chr3.4:92380123-92380142 None:intergenic 50.0%
CTCAGTCTTTACCCCGATAC+TGG + chr3.4:92381218-92381237 None:intergenic 50.0%
GGGTTCAGATTCCTACAGGT+AGG - chr3.4:92380124-92380143 MS.gene80170:intron 50.0%
GTGTTGGGAGTCCTTCAAGT+CGG - chr3.4:92380646-92380665 MS.gene80170:intron 50.0%
TATCGGGGTAAAGACTGAGG+AGG - chr3.4:92381219-92381238 MS.gene80170:CDS 50.0%
TGATAGCACGAGGAAGCTAG+TGG - chr3.4:92381129-92381148 MS.gene80170:CDS 50.0%
! CAGTATCGGGGTAAAGACTG+AGG - chr3.4:92381216-92381235 MS.gene80170:CDS 50.0%
! CTCTGGCTTGAGGAATGTGT+TGG - chr3.4:92380630-92380649 MS.gene80170:intron 50.0%
! GATGTCTAGTCTCTGGCTTG+AGG - chr3.4:92380620-92380639 MS.gene80170:intron 50.0%
! TGATGCATGGACTAACTCGG+AGG + chr3.4:92378970-92378989 None:intergenic 50.0%
ACCATGCGAAGGAGCTTTCC+AGG + chr3.4:92378645-92378664 None:intergenic 55.0%
AGACGCTTTGTGAAGCAGGC+TGG - chr3.4:92380093-92380112 MS.gene80170:intron 55.0%
CTATAGCATGCATCCGTCCC+TGG - chr3.4:92379575-92379594 MS.gene80170:CDS 55.0%
GCGAAGGAGCTTTCCAGGAA+TGG + chr3.4:92378640-92378659 None:intergenic 55.0%
TAGCACGAGGAAGCTAGTGG+AGG - chr3.4:92381132-92381151 MS.gene80170:CDS 55.0%
TCCTGGAAAGCTCCTTCGCA+TGG - chr3.4:92378641-92378660 MS.gene80170:CDS 55.0%
TCGATGTTCACTGCCACGGA+TGG + chr3.4:92381016-92381035 None:intergenic 55.0%
TGGACACTCAACACCAGGGA+CGG + chr3.4:92379591-92379610 None:intergenic 55.0%
! GTTCTTGAGGTGTTCTGCCC+AGG - chr3.4:92379941-92379960 MS.gene80170:intron 55.0%
!! TGTTGAGCAGTGACGGATCC+AGG - chr3.4:92379207-92379226 MS.gene80170:intron 55.0%
CGCTTTGTGAAGCAGGCTGG+TGG - chr3.4:92380096-92380115 MS.gene80170:intron 60.0%
! GAAGCAGGCTGGTGGACCAA+GGG - chr3.4:92380104-92380123 MS.gene80170:intron 60.0%
! TGAAGCAGGCTGGTGGACCA+AGG - chr3.4:92380103-92380122 MS.gene80170:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 92378495 92381282 92378495 ID=MS.gene80170
chr3.4 mRNA 92378495 92381282 92378495 ID=MS.gene80170.t1;Parent=MS.gene80170
chr3.4 exon 92381091 92381282 92381091 ID=MS.gene80170.t1.exon1;Parent=MS.gene80170.t1
chr3.4 CDS 92381091 92381282 92381091 ID=cds.MS.gene80170.t1;Parent=MS.gene80170.t1
chr3.4 exon 92379759 92379938 92379759 ID=MS.gene80170.t1.exon2;Parent=MS.gene80170.t1
chr3.4 CDS 92379759 92379938 92379759 ID=cds.MS.gene80170.t1;Parent=MS.gene80170.t1
chr3.4 exon 92379501 92379666 92379501 ID=MS.gene80170.t1.exon3;Parent=MS.gene80170.t1
chr3.4 CDS 92379501 92379666 92379501 ID=cds.MS.gene80170.t1;Parent=MS.gene80170.t1
chr3.4 exon 92378495 92378910 92378495 ID=MS.gene80170.t1.exon4;Parent=MS.gene80170.t1
chr3.4 CDS 92378495 92378910 92378495 ID=cds.MS.gene80170.t1;Parent=MS.gene80170.t1
Gene Sequence

>MS.gene80170

ATGTTTCTTTTCATAGCAGTTTCTATCTTTTCTGTTTCCTCTGTAACTTCTAATCTTGCTTTCGACTTCTATGCTGCTTCATGTCCAACAGCAGAGTTAATCATAAGAAATGCAGTTAGTACATCCTCTTCAAACGATCCTTCCATTCCTGGAAAGCTCCTTCGCATGGTTTTCCATGATTGCTTTGTAGAGGTTAGTCTTCAAATGTTGCTCTTCACCAAGCAAATGACATTCTGTGGGAGTTTATAGAAACAAGTTATGCCATGTGCATAAGCTATTTTTAGCTTATTTCCATAAGCTCTCTTATGAAAACGGTTTGACTTTATTTATCTTTTGTTATAAAGATAGCTTATACAAATGCACTTATATGATAAGTGTTTGTGATATAAGCGCTTAATTAAATTGTTTATCCAAACAAGACTACTTGATGTGAAATTCAAATTGGTTTTATCTTGATAGATCTTTGTTATTTCCTCCGAGTTAGTCCATGCATCATATGTTTTGGTTCTAAGTGTGGGGTTGTTTTGACTTTTGAGAGTTTCATATTGACTAGAGATATGACTTAGATAGTGCTTGTAAGGTTTGAGCAGTCCGGATCTTGCAAGTCATTTTGTAGGATTTAGTCAGACTCAATGTCAGAATTCTAAGATTTGAAGTTTTGATGACCTTAGAGGTTGCATGCAATAGTGAGCTATGTACCACCAATACGATGTGTTGAGCAGTGACGGATCCAGGATTTTTGAATAGTGGGGGCACTTTATATAAAAATTTGTAGCATTAATAATTGTCCTCTAAAATTATTCATATTACGGAAATTTTGAATGATTTTCTCGTTTTCAATATCAATAAAAAATAATACTCTCTATAAATAAACTAAACAATCATTTAACCAGTCATCCCCGATTTGATTTCACATCTAATTCTTAATAATAGTTTGAGATATATGACGATAAGTGTGGGCCAAGAGAGAAATAATTTGTGATAAGTGTAGTCAATGTGACCAAAATGTCAACTATTTATACATTATACTGCTAAAAAAATTGTTTCTAAAAACTCTGTGTGGGCACAAGCCCACAAACTCTATAGCATGCATCCGTCCCTGGTGTTGAGTGTCCAATACTTGTCGGTATTTGACACTGACACGACATGCATGTGGATACACTCAATCACTTCAATTTTCTCAAATTATCACCAATGTCAACTTCAGTGTCATGTTTGTTGCATTTATGTTAGTGCTTCATAGATAGTGAGGTATCATAATCGGACACTGCACTTTTTTTTACACTGGTTTATGAATTATGATGTTCTCCTTTTGATGCAATAAGATTATTATTTGAAATGCAGGGATGTGATGCATCTTTGATGCTACAAGGGAATAATACAGAACAAAGTGATCCAGGAAATAGATCTGTTGGGGGATTTTCTGTTATAGAAACAGCTAAAAGAGTTCTTGAGGTGTTCTGCCCAGGAACTGTTTCTTGTGCAGACATAATTGCTCTAGCAGCTAGAGATGCAGTTGAAATTGTAAGTTCTCCATTGCACTTCTTATATTATCCTTCAATCAGACATAAACATGTCTTTTTGGTACTGTTGTTGAAAGACGCTTTGTGAAGCAGGCTGGTGGACCAAGGGTTCAGATTCCTACAGGTAGGAGAGATGGAATGGTTTCAATTGCTTCAAATGTTAGACCCAACATTGTGGACACTAGTTTTACTATGGATGAGATGCTTAAGCTCTTTTCCAGTAAAGGATTGTCCTTACTTGATCTTGTGGTTCTTTCAGGTTCATAATATAAACTCAAATCTATATCGATATTATTTACATTTTATAATTTACCAAGACTTGAACATAGCACTAGTATTTTTTATTTCAAGTAAAATCCCATAAAGTAACACATTTTGGTCGGTAGAAATAATTAAACTATAGATGCTTTGTAGATGATATTCATCTAATCAAATTTGTTATAATTACCATCTTGACATGTTGAGAGTACTACGTTGGATAGTAATATGATCTGAACGATGATTATAGTTGAAGGCAACCCTCAGTCCACATATATCTGATATGGTAAACAATGTATAGCCTATTGCGCCATCCACATATATCTAGTAGTTTATACACTCCAGATGTCTAGTCTCTGGCTTGAGGAATGTGTTGGGAGTCCTTCAAGTCGGTTTTCTGAATATTTTGAGTCCGGTCCAATTTTTAAAACATTAGTTGGCCTATTTCTCTTTCTAAATTTTGGATATTCAAACCAAGTGTATTAGACAAAAATATCTCATACTTTATTTGATTGTCAGCTTCTTCTCACTATATTTACTTTAATATCTAACTAGTGTTACATATTCAGTACTAATAGTTAAGCTTTGCAGGGGCTCATACAATAGGAACAGCTCATTGCAACACATTCAGGGGTCGTTTCCAACAAGACAGAAATGGAAGTCTTAAGCTCATTGACCAAACCATTGATACTAATTATGCTGATCAGCTAATAAAACAGTGTCCAATAAATGCACAACCATCCGTGGCAGTGAACATCGATCCTGAAACGTCTATGCTATTTGACAACCAATACTACAGAAATCTTCTTGATCGCAAAGTTCTGTTCCAGTCTGATTCAGTTTTGATGAACGATGATAGCACGAGGAAGCTAGTGGAGGATTTTGCAAATGATCAAGAACTTTTCTTTGACAATTGGGGTGTGTCATTCGTAAAGCTAACCAGTATCGGGGTAAAGACTGAGGAGGGTGAAATTCGACGTTCTTGTGCTGCAACTAATATTGTATAA
Protein sequence

>MS.gene80170.t1

MFLFIAVSIFSVSSVTSNLAFDFYAASCPTAELIIRNAVSTSSSNDPSIPGKLLRMVFHDCFVEGCDASLMLQGNNTEQSDPGNRSVGGFSVIETAKRVLEVFCPGTVSCADIIALAARDAVEIAGGPRVQIPTGRRDGMVSIASNVRPNIVDTSFTMDEMLKLFSSKGLSLLDLVVLSGAHTIGTAHCNTFRGRFQQDRNGSLKLIDQTIDTNYADQLIKQCPINAQPSVAVNIDPETSMLFDNQYYRNLLDRKVLFQSDSVLMNDDSTRKLVEDFANDQELFFDNWGVSFVKLTSIGVKTEEGEIRRSCAATNIV