AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20359


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20359.t1 MTR_5g011250 97.753 356 8 0 1 356 1 356 0.0 714
MS.gene20359.t1 MTR_3g072810 44.706 340 170 6 5 342 3 326 3.44e-95 286
MS.gene20359.t1 MTR_3g072820 41.716 338 185 5 5 342 4 329 4.46e-85 261
MS.gene20359.t1 MTR_5g059130 42.331 326 170 5 27 342 14 331 6.52e-84 258
MS.gene20359.t1 MTR_4g015790 38.416 341 197 4 7 337 13 350 3.16e-83 257
MS.gene20359.t1 MTR_7g068650 37.048 332 205 3 7 337 14 342 1.71e-78 245
MS.gene20359.t1 MTR_5g059140 40.854 328 173 9 5 326 3 315 3.65e-76 238
MS.gene20359.t1 MTR_3g070860 36.446 332 202 5 7 337 14 337 1.67e-72 229
MS.gene20359.t1 MTR_5g082750 37.349 332 199 5 7 337 13 336 3.16e-72 229
MS.gene20359.t1 MTR_3g063180 33.333 339 205 7 7 338 9 333 7.35e-71 225
MS.gene20359.t1 MTR_7g062580 35.484 341 201 7 19 356 31 355 3.52e-70 224
MS.gene20359.t1 MTR_7g062570 34.111 343 207 7 17 356 29 355 4.94e-68 218
MS.gene20359.t1 MTR_7g062550 34.940 332 197 7 19 347 36 351 4.54e-66 213
MS.gene20359.t1 MTR_7g062600 34.808 339 201 8 19 353 27 349 3.76e-65 211
MS.gene20359.t1 MTR_5g055820 35.294 340 203 7 8 345 13 337 1.49e-64 209
MS.gene20359.t1 MTR_5g055900 34.056 323 197 6 8 329 13 320 1.65e-61 201
MS.gene20359.t1 MTR_8g064200 35.692 325 190 7 8 329 18 326 2.21e-61 201
MS.gene20359.t1 MTR_8g064200 35.692 325 190 7 8 329 23 331 3.30e-61 200
MS.gene20359.t1 MTR_7g063730 33.724 341 207 7 19 356 40 364 6.61e-61 200
MS.gene20359.t1 MTR_5g055680 34.018 341 205 7 8 345 13 336 8.02e-61 199
MS.gene20359.t1 MTR_0328s0030 34.694 343 208 6 4 345 7 334 1.04e-59 196
MS.gene20359.t1 MTR_8g074070 35.395 291 172 6 46 331 51 330 1.80e-59 196
MS.gene20359.t1 MTR_5g048550 33.138 341 212 6 8 347 13 338 2.12e-59 195
MS.gene20359.t1 MTR_8g074050 35.540 287 177 5 46 331 51 330 2.88e-59 195
MS.gene20359.t1 MTR_4g116010 32.817 323 200 8 26 344 28 337 4.89e-59 194
MS.gene20359.t1 MTR_3g117420 34.843 287 179 5 46 331 51 330 6.21e-59 194
MS.gene20359.t1 MTR_3g091350 34.824 313 193 4 14 326 30 331 1.61e-58 193
MS.gene20359.t1 MTR_7g102820 33.618 351 201 9 19 352 38 373 3.30e-58 193
MS.gene20359.t1 MTR_5g048850 34.056 323 197 6 8 329 13 320 4.16e-58 192
MS.gene20359.t1 MTR_5g048470 32.865 356 213 8 8 352 18 358 9.14e-58 191
MS.gene20359.t1 MTR_5g032870 35.354 297 179 5 47 338 38 326 1.06e-56 188
MS.gene20359.t1 MTR_5g055690 32.464 345 218 6 4 347 9 339 1.24e-56 188
MS.gene20359.t1 MTR_0009s0050 33.234 337 207 7 8 343 13 332 1.40e-56 188
MS.gene20359.t1 MTR_0009s0050 33.234 337 207 7 8 343 13 332 1.70e-56 188
MS.gene20359.t1 MTR_5g065010 33.918 342 205 9 1 339 1 324 1.96e-56 187
MS.gene20359.t1 MTR_5g055800 32.849 344 214 6 3 345 8 335 2.00e-56 187
MS.gene20359.t1 MTR_5g048740 33.528 343 213 6 4 345 7 335 2.10e-56 187
MS.gene20359.t1 MTR_0009s0480 33.537 328 202 6 3 329 7 319 5.19e-56 187
MS.gene20359.t1 MTR_7g045650 35.636 275 159 6 19 290 36 295 6.66e-56 185
MS.gene20359.t1 MTR_2g437380 31.471 340 219 6 8 345 17 344 9.33e-56 186
MS.gene20359.t1 MTR_3g117485 31.385 325 215 5 6 329 11 328 6.97e-55 184
MS.gene20359.t1 MTR_1g062110 32.424 330 214 5 8 334 27 350 7.97e-55 184
MS.gene20359.t1 MTR_3g026150 31.429 350 218 9 8 352 24 356 8.52e-55 184
MS.gene20359.t1 MTR_3g091360 33.230 322 202 5 7 326 14 324 9.56e-55 183
MS.gene20359.t1 MTR_3g092890 36.218 312 176 10 14 319 8 302 1.08e-54 182
MS.gene20359.t1 MTR_2g072890 31.667 360 215 9 8 353 17 359 1.54e-54 183
MS.gene20359.t1 MTR_5g048570 32.047 337 209 7 8 343 13 330 1.63e-54 182
MS.gene20359.t1 MTR_8g074070 35.052 291 154 8 46 331 51 311 2.28e-54 182
MS.gene20359.t1 MTR_8g024120 33.636 330 203 8 1 329 1 315 2.80e-54 182
MS.gene20359.t1 MTR_1g033810 35.759 316 188 7 16 329 20 322 3.74e-54 182
MS.gene20359.t1 MTR_2g072910 33.333 324 200 7 8 329 17 326 1.58e-52 177
MS.gene20359.t1 MTR_3g117485 34.646 254 161 4 77 329 7 256 3.50e-52 174
MS.gene20359.t1 MTR_5g032880 34.576 295 176 8 47 338 38 318 8.49e-52 182
MS.gene20359.t1 MTR_5g032880 33.333 318 195 6 47 355 376 685 3.58e-51 181
MS.gene20359.t1 MTR_8g075830 34.375 320 190 8 25 342 27 328 5.11e-51 174
MS.gene20359.t1 MTR_8g075890 34.062 320 191 8 25 342 27 328 1.04e-50 173
MS.gene20359.t1 MTR_1g070120 29.674 337 218 9 14 346 10 331 4.05e-49 168
MS.gene20359.t1 MTR_3g088565 32.550 298 182 7 47 338 3 287 5.42e-49 167
MS.gene20359.t1 MTR_1g070135 29.204 339 217 9 14 346 10 331 1.01e-48 167
MS.gene20359.t1 MTR_2g069190 33.234 337 206 9 8 340 33 354 4.84e-48 166
MS.gene20359.t1 MTR_3g058610 32.733 333 193 9 19 346 21 327 1.81e-47 164
MS.gene20359.t1 MTR_3g096500 30.226 354 225 8 2 346 28 368 4.19e-47 164
MS.gene20359.t1 MTR_8g009160 30.357 336 215 7 8 340 28 347 9.32e-47 163
MS.gene20359.t1 MTR_4g093840 29.747 316 207 6 18 329 34 338 1.76e-46 162
MS.gene20359.t1 MTR_5g022020 31.385 325 202 11 23 342 20 328 1.92e-46 162
MS.gene20359.t1 MTR_1g070085 31.232 349 217 9 14 352 9 344 3.12e-46 161
MS.gene20359.t1 MTR_1g070085 31.232 349 217 9 14 352 9 344 3.12e-46 161
MS.gene20359.t1 MTR_2g437380 34.241 257 161 4 102 356 11 261 4.74e-46 158
MS.gene20359.t1 MTR_1g034140 33.555 301 171 7 46 331 26 312 9.33e-46 159
MS.gene20359.t1 MTR_8g008930 32.993 294 186 5 47 337 60 345 1.44e-45 159
MS.gene20359.t1 MTR_1g102070 31.884 345 201 10 17 346 36 361 1.73e-45 160
MS.gene20359.t1 MTR_7g105070 32.070 343 207 10 8 341 24 349 1.97e-45 159
MS.gene20359.t1 MTR_7g081710 29.394 330 219 8 10 338 16 332 2.42e-45 159
MS.gene20359.t1 MTR_3g026150 33.730 252 160 4 102 352 8 253 4.52e-45 155
MS.gene20359.t1 MTR_5g048850 31.985 272 170 5 8 278 13 270 1.13e-44 155
MS.gene20359.t1 MTR_4g087100 32.110 327 196 9 43 352 22 339 1.47e-44 157
MS.gene20359.t1 MTR_1g081840 29.942 344 208 8 18 347 32 356 2.67e-44 156
MS.gene20359.t1 MTR_8g028435 33.220 295 185 7 47 338 60 345 2.90e-44 156
MS.gene20359.t1 MTR_7g029655 33.036 336 190 10 8 329 28 342 5.38e-44 155
MS.gene20359.t1 MTR_6g464620 32.059 340 205 10 18 346 42 366 1.78e-43 154
MS.gene20359.t1 MTR_8g009110 29.762 336 218 8 8 340 28 348 1.86e-43 154
MS.gene20359.t1 MTR_2g069210 30.539 334 215 7 8 338 29 348 2.13e-43 154
MS.gene20359.t1 MTR_1g034120 28.571 343 211 9 16 338 1 329 2.56e-43 153
MS.gene20359.t1 MTR_0009s0480 31.159 276 175 5 3 277 7 268 4.86e-43 150
MS.gene20359.t1 MTR_3g088745 30.702 342 210 9 17 347 14 339 5.02e-43 153
MS.gene20359.t1 MTR_2g069090 31.454 337 213 9 8 340 33 355 6.57e-43 153
MS.gene20359.t1 MTR_8g009090 32.765 293 183 7 47 335 60 342 1.15e-42 152
MS.gene20359.t1 MTR_3g026150 31.636 275 167 8 8 277 24 282 1.22e-42 150
MS.gene20359.t1 MTR_4g117880 32.313 294 188 7 47 337 60 345 2.77e-42 151
MS.gene20359.t1 MTR_2g068840 32.407 324 189 10 8 321 22 325 3.63e-42 150
MS.gene20359.t1 MTR_3g045230 29.630 351 225 10 5 351 15 347 4.00e-42 150
MS.gene20359.t1 MTR_5g085330 31.864 295 184 6 48 338 6 287 4.90e-42 149
MS.gene20359.t1 MTR_1g034060 28.736 348 204 10 16 338 1 329 5.46e-42 150
MS.gene20359.t1 MTR_2g025120 30.420 286 185 5 48 332 5 277 7.36e-42 149
MS.gene20359.t1 MTR_2g069010 27.697 343 226 8 8 342 33 361 7.98e-42 150
MS.gene20359.t1 MTR_4g087110 31.546 317 185 11 43 338 22 327 9.70e-42 149
MS.gene20359.t1 MTR_4g087120 31.902 326 197 10 43 349 22 341 9.90e-42 149
MS.gene20359.t1 MTR_1g032140 31.707 328 198 7 8 329 30 337 1.02e-41 149
MS.gene20359.t1 MTR_4g087090 32.000 300 175 8 47 329 30 317 1.47e-41 149
MS.gene20359.t1 MTR_2g069020 30.294 340 218 10 8 342 31 356 2.27e-41 149
MS.gene20359.t1 MTR_3g043900 30.199 351 222 10 5 351 15 346 2.34e-41 148
MS.gene20359.t1 MTR_8g033380 30.484 351 201 8 16 347 30 356 2.52e-41 149
MS.gene20359.t1 MTR_1g062110 30.403 273 182 4 8 277 27 294 2.65e-41 147
MS.gene20359.t1 MTR_8g009170 30.000 340 219 8 8 344 28 351 2.68e-41 148
MS.gene20359.t1 MTR_5g055690 30.545 275 177 5 4 277 9 270 3.16e-41 145
MS.gene20359.t1 MTR_7g062560 29.155 343 214 10 8 347 27 343 3.76e-41 148
MS.gene20359.t1 MTR_2g069020 30.294 340 218 10 8 342 31 356 4.85e-41 148
MS.gene20359.t1 MTR_3g083370 30.508 295 190 6 46 339 3 283 5.04e-41 146
MS.gene20359.t1 MTR_8g009080 32.895 304 185 9 47 344 94 384 5.62e-41 148
MS.gene20359.t1 MTR_2g068960 29.070 344 220 9 8 342 27 355 8.70e-41 147
MS.gene20359.t1 MTR_2g068950 28.488 344 222 9 8 342 27 355 9.16e-41 147
MS.gene20359.t1 MTR_1g070080 29.180 305 194 5 14 313 9 296 9.30e-41 146
MS.gene20359.t1 MTR_8g041620 29.969 327 205 9 8 326 33 343 9.52e-41 147
MS.gene20359.t1 MTR_1g093110 28.824 340 223 8 8 340 30 357 9.55e-41 147
MS.gene20359.t1 MTR_4g087140 29.846 325 200 11 47 353 26 340 1.19e-40 146
MS.gene20359.t1 MTR_1g093140 27.826 345 224 10 8 340 30 361 1.54e-40 147
MS.gene20359.t1 MTR_1g093120 29.326 341 217 9 8 340 29 353 2.39e-40 146
MS.gene20359.t1 MTR_0009s0050 34.728 239 147 5 106 343 4 234 2.92e-40 142
MS.gene20359.t1 MTR_0009s0050 34.728 239 147 5 106 343 4 234 3.03e-40 143
MS.gene20359.t1 MTR_4g115990 30.282 284 169 5 47 329 46 301 8.48e-40 143
MS.gene20359.t1 MTR_2g102570 32.323 297 182 7 47 338 52 334 1.49e-39 144
MS.gene20359.t1 MTR_4g087130 33.945 327 188 11 43 349 22 340 1.62e-39 144
MS.gene20359.t1 MTR_1g032250 30.618 356 206 10 8 350 37 364 6.65e-39 142
MS.gene20359.t1 MTR_2g069060 30.405 296 179 6 40 326 42 319 2.10e-38 140
MS.gene20359.t1 MTR_8g093930 28.242 347 220 7 17 355 24 349 3.24e-38 140
MS.gene20359.t1 MTR_1g070135 28.839 267 171 7 14 277 10 260 3.96e-38 138
MS.gene20359.t1 MTR_1g032220 28.453 362 206 10 8 350 37 364 4.04e-38 140
MS.gene20359.t1 MTR_7g102720 31.271 291 185 9 65 351 49 328 4.24e-38 139
MS.gene20359.t1 MTR_2g069300 28.319 339 217 10 8 338 19 339 7.45e-38 139
MS.gene20359.t1 MTR_1g043810 29.204 339 217 10 8 340 20 341 7.93e-38 139
MS.gene20359.t1 MTR_0056s0160 35.407 209 130 3 122 329 1 205 1.07e-37 135
MS.gene20359.t1 MTR_2g072910 30.909 275 175 6 8 280 17 278 2.84e-37 135
MS.gene20359.t1 MTR_6g015950 29.155 343 216 11 6 345 3 321 3.36e-37 137
MS.gene20359.t1 MTR_8g041600 28.485 330 206 10 8 326 33 343 3.39e-37 138
MS.gene20359.t1 MTR_7g016090 28.261 322 211 9 17 336 14 317 3.89e-37 136
MS.gene20359.t1 MTR_1g011580 28.387 310 200 7 11 313 22 316 4.16e-37 137
MS.gene20359.t1 MTR_7g016090 28.261 322 211 9 17 336 16 319 4.32e-37 136
MS.gene20359.t1 MTR_1g048940 27.245 323 216 9 15 334 20 326 5.69e-37 137
MS.gene20359.t1 MTR_5g005570 29.936 314 187 10 46 356 36 319 1.06e-36 135
MS.gene20359.t1 MTR_7g451860 32.222 270 171 6 46 313 40 299 1.67e-36 135
MS.gene20359.t1 MTR_7g047670 32.222 270 171 6 46 313 40 299 1.67e-36 135
MS.gene20359.t1 MTR_0032s0040 32.229 332 201 9 8 329 28 345 2.34e-36 135
MS.gene20359.t1 MTR_1g043775 28.869 336 220 9 8 339 20 340 2.35e-36 135
MS.gene20359.t1 MTR_8g062600 28.529 340 224 8 8 342 33 358 3.81e-36 135
MS.gene20359.t1 MTR_1g043760 28.487 337 216 9 8 338 20 337 1.75e-35 132
MS.gene20359.t1 MTR_1g043770 29.878 328 204 10 8 329 20 327 3.79e-35 132
MS.gene20359.t1 MTR_1g070185 29.155 343 213 10 8 344 34 352 1.25e-34 130
MS.gene20359.t1 MTR_4g024660 27.273 341 227 8 8 342 33 358 1.45e-34 130
MS.gene20359.t1 MTR_2g083030 30.450 289 181 8 32 313 18 293 2.81e-34 129
MS.gene20359.t1 MTR_2g068800 29.630 297 163 8 8 295 22 281 3.16e-34 127
MS.gene20359.t1 MTR_8g063070 27.273 341 227 9 8 342 33 358 4.36e-34 129
MS.gene20359.t1 MTR_7g016080 29.487 312 195 8 17 326 14 302 5.98e-34 128
MS.gene20359.t1 MTR_7g078010 29.412 340 218 8 8 339 33 358 7.58e-34 129
MS.gene20359.t1 MTR_6g092620 30.142 282 173 9 47 321 3 267 7.78e-34 127
MS.gene20359.t1 MTR_7g056347 27.988 343 223 10 8 341 33 360 3.40e-32 124
MS.gene20359.t1 MTR_1g070100 30.000 260 167 6 103 352 8 262 4.20e-32 121
MS.gene20359.t1 MTR_1g070085 30.000 260 167 6 103 352 12 266 4.91e-32 121
MS.gene20359.t1 MTR_8g469400 28.035 346 205 10 8 342 33 345 5.11e-32 123
MS.gene20359.t1 MTR_4g123020 27.961 304 184 9 47 337 20 301 1.46e-31 121
MS.gene20359.t1 MTR_8g093980 27.950 322 207 8 17 330 36 340 2.75e-31 122
MS.gene20359.t1 MTR_8g006930 29.032 341 217 10 8 340 33 356 3.79e-31 121
MS.gene20359.t1 MTR_2g083000 28.873 284 182 11 33 313 22 288 4.04e-31 120
MS.gene20359.t1 MTR_2g019370 27.815 302 191 8 47 337 28 313 6.31e-31 120
MS.gene20359.t1 MTR_4g074130 28.428 299 190 8 46 340 39 317 5.20e-30 117
MS.gene20359.t1 MTR_8g009080 33.476 233 140 7 47 276 94 314 6.69e-30 117
MS.gene20359.t1 MTR_8g009150 28.523 298 180 8 47 340 60 328 1.19e-29 117
MS.gene20359.t1 MTR_1g027290 28.358 335 212 9 16 338 1 319 1.41e-29 116
MS.gene20359.t1 MTR_8g009080 33.913 230 137 7 47 273 94 311 1.65e-29 116
MS.gene20359.t1 MTR_2g025120 29.185 233 152 4 46 277 3 223 2.82e-29 113
MS.gene20359.t1 MTR_3g083370 30.043 233 150 4 46 277 3 223 4.24e-29 112
MS.gene20359.t1 MTR_8g009120 28.803 309 193 8 37 340 50 336 5.23e-29 115
MS.gene20359.t1 MTR_0009s0050 40.714 140 79 3 205 343 16 152 6.27e-29 110
MS.gene20359.t1 MTR_8g009170 29.259 270 175 6 8 276 28 282 9.22e-29 113
MS.gene20359.t1 MTR_2g069060 28.295 258 158 6 29 277 9 248 1.56e-28 112
MS.gene20359.t1 MTR_3g040410 28.929 280 187 7 45 323 4 272 2.28e-28 112
MS.gene20359.t1 MTR_7g056393 28.528 326 210 9 8 326 33 342 2.93e-28 113
MS.gene20359.t1 MTR_8g041600 27.698 278 174 9 8 277 33 291 5.05e-28 111
MS.gene20359.t1 MTR_2g070870 26.923 286 185 8 46 325 27 294 1.05e-27 111
MS.gene20359.t1 MTR_1g043770 30.515 272 167 9 8 276 20 272 1.44e-27 110
MS.gene20359.t1 MTR_1g086550 28.395 324 193 11 35 337 8 313 1.56e-27 111
MS.gene20359.t1 MTR_1g043810 28.413 271 176 7 8 276 20 274 2.11e-27 110
MS.gene20359.t1 MTR_4g119410 27.434 339 225 9 8 340 33 356 6.35e-27 110
MS.gene20359.t1 MTR_2g033270 27.907 301 197 6 44 337 11 298 9.06e-27 108
MS.gene20359.t1 MTR_8g461330 27.027 296 180 9 46 325 26 301 1.17e-26 108
MS.gene20359.t1 MTR_4g100600 29.221 308 196 11 46 342 8 304 1.46e-26 108
MS.gene20359.t1 MTR_7g056353 28.137 263 175 5 85 342 79 332 2.34e-26 110
MS.gene20359.t1 MTR_1g043775 28.413 271 176 7 8 276 20 274 2.69e-26 107
MS.gene20359.t1 MTR_0009s0400 42.735 117 65 2 214 329 1 116 6.50e-26 101
MS.gene20359.t1 MTR_1g027310 30.584 291 155 10 46 334 48 293 7.21e-26 105
MS.gene20359.t1 MTR_8g009180 31.878 229 137 6 125 338 51 275 3.82e-25 103
MS.gene20359.t1 MTR_4g100590 28.105 306 197 10 46 342 8 299 3.97e-25 103
MS.gene20359.t1 MTR_4g132770 37.984 129 76 3 213 338 28 155 8.54e-24 96.7
MS.gene20359.t1 MTR_7g078010 27.778 270 181 6 8 277 33 288 6.17e-23 97.8
MS.gene20359.t1 MTR_8g102600 26.646 319 209 10 42 342 3 314 1.92e-21 94.0
MS.gene20359.t1 MTR_4g096840 26.042 288 188 8 47 325 29 300 4.04e-21 93.2
MS.gene20359.t1 MTR_1g070110 28.814 236 128 7 92 323 1 200 1.10e-20 90.1
MS.gene20359.t1 MTR_8g030880 26.045 311 210 9 48 351 6 303 3.54e-20 90.1
MS.gene20359.t1 MTR_3g464530 26.950 282 164 10 47 313 34 288 5.05e-20 89.7
MS.gene20359.t1 MTR_4g021380 25.078 319 212 11 46 350 6 311 9.97e-20 89.0
MS.gene20359.t1 MTR_0009s0410 29.448 163 104 3 3 165 7 158 1.11e-19 85.5
MS.gene20359.t1 MTR_6g088665 27.562 283 179 9 70 331 38 315 7.04e-19 86.7
MS.gene20359.t1 MTR_6g088665 27.208 283 179 9 70 331 38 314 9.04e-19 86.7
MS.gene20359.t1 MTR_5g025090 26.117 291 191 8 47 334 5 274 1.58e-18 85.1
MS.gene20359.t1 MTR_7g077670 24.161 298 184 7 72 351 30 303 9.19e-18 83.2
MS.gene20359.t1 MTR_4g100590 28.400 250 162 8 102 342 11 252 3.20e-17 80.9
MS.gene20359.t1 MTR_3g108520 26.316 323 198 14 46 348 6 308 5.40e-17 81.3
MS.gene20359.t1 MTR_2g072930 28.846 156 100 4 8 162 17 162 6.12e-17 78.2
MS.gene20359.t1 MTR_5g027230 25.926 297 196 10 44 337 3 278 1.14e-16 80.1
MS.gene20359.t1 MTR_5g025050 25.256 293 197 8 47 337 5 277 1.79e-16 79.3
MS.gene20359.t1 MTR_4g011690 25.312 320 205 10 45 350 7 306 1.22e-15 77.0
MS.gene20359.t1 MTR_4g011720 26.389 288 198 8 66 350 29 305 1.94e-15 76.6
MS.gene20359.t1 MTR_7g090520 26.129 310 203 13 47 347 10 302 6.52e-15 75.1
MS.gene20359.t1 MTR_1g043840 30.000 150 95 3 162 304 38 184 5.47e-14 72.4
MS.gene20359.t1 MTR_4g100600 30.516 213 131 9 46 251 8 210 6.87e-14 70.9
MS.gene20359.t1 MTR_8g102600 25.769 260 170 8 101 342 10 264 8.27e-14 71.2
MS.gene20359.t1 MTR_4g021360 23.188 276 195 9 84 348 37 306 3.28e-13 70.1
MS.gene20359.t1 MTR_1g032240 34.454 119 55 3 190 307 50 146 1.05e-12 66.2
MS.gene20359.t1 MTR_2g068850 26.797 153 102 3 8 160 22 164 4.09e-12 65.5
MS.gene20359.t1 MTR_4g094900 29.670 182 114 5 69 241 37 213 1.04e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20359.t1 AT4G22880 78.736 348 73 1 3 349 2 349 0.0 571
MS.gene20359.t1 AT4G22880 78.736 348 73 1 3 349 2 349 0.0 571
MS.gene20359.t1 AT4G22880 78.736 348 73 1 3 349 2 349 0.0 571
MS.gene20359.t1 AT5G08640 43.695 341 176 7 5 342 3 330 5.78e-93 281
MS.gene20359.t1 AT5G08640 43.695 341 176 7 5 342 3 330 5.78e-93 281
MS.gene20359.t1 AT3G11180 37.651 332 198 5 7 337 55 378 5.01e-76 240
MS.gene20359.t1 AT3G11180 37.651 332 198 5 7 337 55 378 5.57e-76 240
MS.gene20359.t1 AT5G05600 37.952 332 197 5 7 337 26 349 2.61e-75 237
MS.gene20359.t1 AT2G38240 36.747 332 196 6 8 337 12 331 6.53e-74 233
MS.gene20359.t1 AT5G63590 42.808 292 158 5 47 337 14 297 5.79e-71 224
MS.gene20359.t1 AT4G16330 35.514 321 187 7 35 352 55 358 2.63e-69 221
MS.gene20359.t1 AT3G55970 36.607 336 201 6 7 337 13 341 1.27e-68 219
MS.gene20359.t1 AT1G49390 38.538 301 176 6 47 345 45 338 6.24e-65 209
MS.gene20359.t1 AT4G22870 84.762 105 16 0 245 349 1 105 1.22e-62 196
MS.gene20359.t1 AT5G20400 39.437 284 165 5 47 329 45 322 1.67e-61 201
MS.gene20359.t1 AT1G17020 34.365 323 201 6 16 337 26 338 5.40e-60 197
MS.gene20359.t1 AT5G43935 35.197 304 160 7 46 344 18 289 7.02e-60 195
MS.gene20359.t1 AT4G10500 34.056 323 193 9 8 325 6 313 1.04e-59 196
MS.gene20359.t1 AT1G49390 38.636 264 156 4 83 345 1 259 3.47e-59 192
MS.gene20359.t1 AT5G63600 35.473 296 177 6 47 342 33 314 5.01e-59 194
MS.gene20359.t1 AT3G21420 34.727 311 194 5 46 353 54 358 7.69e-59 194
MS.gene20359.t1 AT5G54000 37.193 285 172 5 46 329 45 323 1.31e-58 193
MS.gene20359.t1 AT5G63600 35.354 297 177 7 47 342 33 315 4.20e-58 191
MS.gene20359.t1 AT5G20550 37.979 287 170 6 47 331 45 325 7.01e-58 191
MS.gene20359.t1 AT4G22870 83.838 99 16 0 251 349 48 146 9.13e-58 184
MS.gene20359.t1 AT1G55290 34.670 349 203 11 8 351 26 354 1.19e-57 191
MS.gene20359.t1 AT3G13610 33.815 346 209 10 8 351 27 354 1.35e-56 188
MS.gene20359.t1 AT5G63595 38.346 266 135 7 48 313 26 262 1.37e-56 186
MS.gene20359.t1 AT4G16330 36.398 261 154 5 95 352 1 252 3.38e-56 184
MS.gene20359.t1 AT4G10490 33.234 337 200 11 11 338 6 326 1.14e-55 186
MS.gene20359.t1 AT5G05600 34.926 272 169 4 7 277 26 290 3.41e-55 182
MS.gene20359.t1 AT1G78550 33.544 316 197 6 15 329 25 328 1.01e-54 183
MS.gene20359.t1 AT3G55970 35.870 276 166 5 7 277 13 282 2.93e-54 181
MS.gene20359.t1 AT4G25300 33.448 290 182 5 16 304 25 304 1.63e-53 180
MS.gene20359.t1 AT5G54000 38.367 245 145 4 83 326 1 240 1.73e-53 177
MS.gene20359.t1 AT3G51240 32.738 336 207 9 13 344 9 329 7.93e-53 179
MS.gene20359.t1 AT2G36690 32.047 337 213 8 8 338 21 347 5.39e-52 176
MS.gene20359.t1 AT2G36690 32.047 337 213 8 8 338 21 347 5.39e-52 176
MS.gene20359.t1 AT1G17010 32.381 315 202 6 16 329 26 330 6.28e-52 176
MS.gene20359.t1 AT4G25310 36.264 273 165 5 68 339 71 335 4.73e-51 174
MS.gene20359.t1 AT5G24530 31.915 329 205 9 17 343 13 324 2.15e-49 169
MS.gene20359.t1 AT2G44800 31.928 332 213 8 10 340 18 337 5.33e-49 168
MS.gene20359.t1 AT5G07200 35.220 318 173 8 19 322 37 335 6.01e-49 169
MS.gene20359.t1 AT1G03410 32.209 326 206 8 8 329 20 334 1.25e-46 162
MS.gene20359.t1 AT1G78550 35.060 251 156 4 80 329 6 250 1.27e-46 160
MS.gene20359.t1 AT3G60290 30.409 342 224 9 11 351 19 347 1.87e-46 162
MS.gene20359.t1 AT3G19000 34.810 316 179 10 25 326 15 317 2.64e-46 161
MS.gene20359.t1 AT1G03410 32.209 326 206 8 8 329 57 371 3.99e-46 162
MS.gene20359.t1 AT4G25420 32.267 344 200 9 17 346 38 362 7.51e-46 160
MS.gene20359.t1 AT5G07480 33.898 295 180 9 47 334 44 330 1.41e-45 159
MS.gene20359.t1 AT1G60980 31.579 342 202 9 19 346 36 359 7.96e-45 158
MS.gene20359.t1 AT5G63580 40.693 231 128 5 47 277 19 240 1.67e-44 153
MS.gene20359.t1 AT5G63580 41.048 229 126 5 47 275 19 238 2.19e-44 153
MS.gene20359.t1 AT1G77330 33.663 303 171 11 47 338 3 286 6.65e-44 154
MS.gene20359.t1 AT1G15550 30.746 335 209 12 13 341 24 341 8.70e-44 155
MS.gene20359.t1 AT1G06640 32.530 332 198 10 8 329 26 341 3.16e-43 154
MS.gene20359.t1 AT1G06620 31.672 341 214 8 8 345 27 351 4.46e-43 153
MS.gene20359.t1 AT5G51810 31.977 344 197 10 17 346 40 360 4.88e-43 153
MS.gene20359.t1 AT3G19010 32.203 295 183 6 46 329 27 315 1.02e-42 152
MS.gene20359.t1 AT3G19010 32.203 295 183 6 46 329 27 315 1.02e-42 152
MS.gene20359.t1 AT3G12900 30.925 346 219 10 8 351 22 349 3.30e-42 150
MS.gene20359.t1 AT1G06650 31.498 327 208 8 8 329 26 341 6.71e-42 150
MS.gene20359.t1 AT2G30840 30.588 340 222 9 8 344 21 349 2.95e-41 148
MS.gene20359.t1 AT1G03400 30.000 330 198 9 8 329 20 324 3.34e-40 145
MS.gene20359.t1 AT1G80330 31.228 285 183 6 70 345 63 343 3.71e-40 145
MS.gene20359.t1 AT1G05010 32.246 276 172 6 48 321 5 267 3.76e-40 144
MS.gene20359.t1 AT1G44090 31.818 330 196 9 18 336 42 353 4.98e-40 145
MS.gene20359.t1 AT5G59530 28.986 345 220 8 1 337 17 344 4.98e-40 145
MS.gene20359.t1 AT3G51240 34.387 253 155 6 95 344 1 245 6.34e-40 142
MS.gene20359.t1 AT1G80340 31.307 329 201 9 18 341 26 334 8.34e-40 144
MS.gene20359.t1 AT5G43440 31.818 286 182 7 47 329 62 337 1.10e-39 144
MS.gene20359.t1 AT1G12010 29.592 294 191 6 46 338 6 284 1.34e-39 143
MS.gene20359.t1 AT3G19000 32.727 275 159 9 25 285 15 277 1.56e-39 141
MS.gene20359.t1 AT1G06645 30.091 329 207 7 8 329 39 351 2.48e-39 144
MS.gene20359.t1 AT4G21690 30.032 313 189 8 7 310 17 308 7.45e-39 141
MS.gene20359.t1 AT5G59540 29.819 332 209 9 6 329 23 338 8.43e-39 142
MS.gene20359.t1 AT2G30830 28.235 340 226 8 8 344 21 345 8.45e-39 142
MS.gene20359.t1 AT3G61400 30.347 346 204 10 8 336 25 350 1.46e-38 141
MS.gene20359.t1 AT5G43450 29.730 333 217 8 8 337 24 342 3.89e-38 140
MS.gene20359.t1 AT1G04350 28.571 329 210 8 8 329 22 332 8.92e-38 139
MS.gene20359.t1 AT1G62380 29.932 294 190 8 46 338 6 284 1.06e-37 138
MS.gene20359.t1 AT2G30840 30.294 340 217 10 8 344 21 343 3.52e-37 137
MS.gene20359.t1 AT1G04380 31.488 289 176 9 47 329 45 317 4.82e-37 137
MS.gene20359.t1 AT4G21200 30.333 300 187 9 46 342 41 321 2.00e-36 135
MS.gene20359.t1 AT2G19590 30.605 281 172 8 46 321 10 272 3.18e-35 131
MS.gene20359.t1 AT4G25310 31.868 273 149 5 68 339 71 307 7.21e-35 130
MS.gene20359.t1 AT5G12270 29.114 316 197 8 16 324 30 325 7.39e-35 131
MS.gene20359.t1 AT1G03400 27.654 358 198 10 8 329 20 352 1.61e-34 130
MS.gene20359.t1 AT1G06620 32.593 270 167 6 8 276 27 282 3.68e-34 127
MS.gene20359.t1 AT1G06640 31.915 282 171 7 8 283 26 292 1.15e-33 127
MS.gene20359.t1 AT1G06640 32.246 276 166 7 8 277 26 286 2.35e-33 125
MS.gene20359.t1 AT2G25450 28.696 345 221 11 8 345 21 347 2.87e-33 127
MS.gene20359.t1 AT3G19010 29.153 295 162 6 46 329 27 285 5.73e-33 125
MS.gene20359.t1 AT1G06650 30.996 271 176 5 8 277 26 286 1.78e-32 124
MS.gene20359.t1 AT3G19010 30.328 244 154 5 46 278 27 265 5.95e-32 122
MS.gene20359.t1 AT1G30040 27.946 297 193 7 47 337 31 312 2.10e-31 121
MS.gene20359.t1 AT4G25420 30.769 273 159 7 17 277 38 292 2.92e-31 120
MS.gene20359.t1 AT2G34555 29.766 299 184 9 47 337 27 307 3.04e-31 121
MS.gene20359.t1 AT5G07480 35.023 217 128 7 125 334 11 221 2.30e-30 116
MS.gene20359.t1 AT5G43440 32.468 231 145 6 47 276 62 282 4.11e-30 117
MS.gene20359.t1 AT3G49620 32.759 290 175 11 69 343 63 347 8.70e-30 117
MS.gene20359.t1 AT3G61400 30.282 284 164 8 8 277 25 288 1.30e-29 115
MS.gene20359.t1 AT2G30840 30.000 270 177 7 8 276 21 279 2.22e-29 115
MS.gene20359.t1 AT2G19590 30.864 243 148 7 84 321 30 257 2.98e-29 114
MS.gene20359.t1 AT5G51810 30.515 272 163 7 17 280 40 293 5.02e-29 114
MS.gene20359.t1 AT5G43450 30.370 270 173 7 8 276 24 279 1.81e-28 112
MS.gene20359.t1 AT5G59540 28.520 277 178 7 6 277 23 284 3.64e-28 111
MS.gene20359.t1 AT1G78440 26.073 303 194 9 47 337 18 302 1.03e-27 111
MS.gene20359.t1 AT3G49630 31.034 290 178 10 69 342 34 317 1.28e-27 111
MS.gene20359.t1 AT3G49630 31.034 290 178 10 69 342 38 321 1.39e-27 111
MS.gene20359.t1 AT1G04380 31.224 237 143 8 47 279 45 265 4.07e-27 108
MS.gene20359.t1 AT1G50960 27.857 280 189 6 28 307 25 291 4.00e-26 107
MS.gene20359.t1 AT1G02400 29.861 288 177 11 63 337 34 309 4.55e-26 107
MS.gene20359.t1 AT3G50210 28.947 304 185 12 47 326 8 304 4.88e-26 106
MS.gene20359.t1 AT3G50210 28.947 304 185 12 47 326 8 304 4.88e-26 106
MS.gene20359.t1 AT3G50210 28.947 304 185 12 47 326 8 304 4.88e-26 106
MS.gene20359.t1 AT4G25300 32.620 187 121 4 165 350 72 254 3.23e-25 103
MS.gene20359.t1 AT3G46500 27.362 307 200 9 40 330 2 301 2.38e-22 96.7
MS.gene20359.t1 AT1G14130 28.866 291 185 8 44 331 6 277 3.01e-22 95.9
MS.gene20359.t1 AT1G47990 25.347 288 182 9 47 321 15 282 1.42e-21 94.4
MS.gene20359.t1 AT4G23340 28.475 295 173 11 73 351 30 302 4.12e-20 90.1
MS.gene20359.t1 AT3G47190 25.817 306 180 10 47 336 32 306 4.32e-20 90.1
MS.gene20359.t1 AT1G30040 26.027 219 151 5 65 277 40 253 7.57e-19 85.5
MS.gene20359.t1 AT1G14120 26.846 298 176 9 47 331 8 276 9.20e-18 83.2
MS.gene20359.t1 AT1G14120 26.846 298 176 9 47 331 8 276 9.20e-18 83.2
MS.gene20359.t1 AT1G14120 26.846 298 176 9 47 331 8 276 9.20e-18 83.2
MS.gene20359.t1 AT3G49630 32.292 192 118 7 158 342 62 248 1.32e-17 82.0
MS.gene20359.t1 AT3G46500 26.224 286 189 8 40 309 2 281 1.70e-17 82.4
MS.gene20359.t1 AT3G50210 33.143 175 107 6 158 326 52 222 6.95e-17 79.7
MS.gene20359.t1 AT4G23340 31.551 187 117 7 171 351 3 184 9.64e-16 75.5
MS.gene20359.t1 AT4G03070 26.452 310 192 10 46 339 13 302 1.01e-15 77.4
MS.gene20359.t1 AT1G80320 25.667 300 187 9 47 331 9 287 5.10e-15 75.5
MS.gene20359.t1 AT1G35190 26.596 282 181 8 70 331 29 304 8.03e-15 75.1
MS.gene20359.t1 AT3G46490 25.430 291 193 9 70 341 34 319 2.45e-14 73.6
MS.gene20359.t1 AT1G52820 25.725 276 177 7 66 331 32 289 3.21e-14 73.2
MS.gene20359.t1 AT1G02400 27.511 229 143 9 63 279 34 251 7.53e-14 71.2
MS.gene20359.t1 AT4G16765 26.882 186 124 5 165 342 59 240 8.25e-13 67.8
MS.gene20359.t1 AT4G16765 26.882 186 124 5 165 342 59 240 8.25e-13 67.8
MS.gene20359.t1 AT4G16765 26.882 186 124 5 165 342 59 240 8.25e-13 67.8
MS.gene20359.t1 AT3G46500 27.232 224 145 7 121 330 8 227 8.27e-13 68.2
MS.gene20359.t1 AT3G46500 27.232 224 145 7 121 330 8 227 8.27e-13 68.2
MS.gene20359.t1 AT5G51310 23.741 278 180 9 70 328 22 286 2.01e-12 67.8
MS.gene20359.t1 AT4G03050 37.273 110 66 3 227 334 274 382 8.22e-12 66.6
MS.gene20359.t1 AT4G03050 37.273 110 66 3 227 334 274 382 8.22e-12 66.6
MS.gene20359.t1 AT3G46490 24.706 255 169 8 70 304 34 285 1.59e-11 65.1
MS.gene20359.t1 AT1G52800 24.742 291 201 9 46 331 9 286 2.08e-11 64.7

Find 62 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGTCTCACATATTCTTT+TGG 0.172725 5.1:-4765303 None:intergenic
AGCTCTGGCTGAGGGCAAAT+TGG 0.266598 5.1:-4766877 None:intergenic
ATGTTTGTTAACTCTTCTTT+TGG 0.313451 5.1:-4765321 None:intergenic
TATGCAAATGATCAAAGTTC+AGG 0.328389 5.1:+4765582 MS.gene20359:CDS
TCATCGTGGATTGGTGAATA+AGG 0.330905 5.1:+4767086 MS.gene20359:CDS
GCAAACCTGGGACCATATTA+TGG 0.336556 5.1:-4766951 None:intergenic
GATTCAATTCTCATGCATAT+TGG 0.346090 5.1:+4767018 MS.gene20359:CDS
TCAGGGAAGATTCAAGGTTA+TGG 0.360224 5.1:+4765600 MS.gene20359:CDS
ATAAACGTGATTTGTCTATA+TGG 0.368270 5.1:+4765697 MS.gene20359:CDS
TCTTCAGATGAAATAGTTAG+AGG 0.369970 5.1:+4765414 MS.gene20359:CDS
TAAGTGAACTTACATCTGTA+TGG 0.386015 5.1:-4766918 None:intergenic
TACATTCCTCCTCCATAATA+TGG 0.386987 5.1:+4766939 MS.gene20359:CDS
AGTCCTAGCTAGCAAGATAA+TGG 0.387543 5.1:+4766756 MS.gene20359:CDS
TAAGAAAGCTGCAGAGGAAT+GGG 0.406966 5.1:+4765455 MS.gene20359:CDS
ATGCTAGTGGTCAACTTGAA+TGG 0.413046 5.1:+4765640 MS.gene20359:CDS
CTTCCATTATCTTGCTAGCT+AGG 0.422131 5.1:-4766759 None:intergenic
GTATAATCAGCAGGTGTCTT+AGG 0.424548 5.1:-4765720 None:intergenic
GTTATCTCTTGAACTAGGAT+TGG 0.435827 5.1:+4766783 MS.gene20359:CDS
ATTAATCGTTTGAAGAAAGC+TGG 0.437968 5.1:+4765519 MS.gene20359:CDS
GCTCTGGCTGAGGGCAAATT+GGG 0.441246 5.1:-4766876 None:intergenic
GTGCGAGGTGGAAACCTTGT+TGG 0.452072 5.1:-4767201 None:intergenic
TGCTAGTGGTCAACTTGAAT+GGG 0.464985 5.1:+4765641 MS.gene20359:CDS
AGGTCTATTGTTGGAACTTG+AGG 0.468565 5.1:-4765378 None:intergenic
CAAAGTTCAGGGAAGATTCA+AGG 0.478666 5.1:+4765594 MS.gene20359:CDS
GACAAATCACGTTTATCCTC+TGG 0.481341 5.1:-4765690 None:intergenic
CTCCTCCATAATATGGTCCC+AGG 0.491984 5.1:+4766946 MS.gene20359:CDS
TCATAGAAAAGTTGCAAACC+TGG 0.502750 5.1:-4766964 None:intergenic
AAACATAGGTAACATCTTTG+AGG 0.506272 5.1:+4765338 MS.gene20359:CDS
ATGCAAATGATCAAAGTTCA+GGG 0.522708 5.1:+4765583 MS.gene20359:CDS
TCAACTCCAAGTGCTAGCTC+TGG 0.523457 5.1:-4766892 None:intergenic
ATATGCATGAGAATTGAATC+AGG 0.524018 5.1:-4767015 None:intergenic
TTAAGAAAGCTGCAGAGGAA+TGG 0.526405 5.1:+4765454 MS.gene20359:CDS
TCACTTACAAGTTCAGGAAG+TGG 0.529612 5.1:-4767171 None:intergenic
TCTCTTGAACTAGGATTGGA+AGG 0.540412 5.1:+4766787 MS.gene20359:CDS
CCAAGTGCTAGCTCTGGCTG+AGG 0.541831 5.1:-4766886 None:intergenic
GAAGTGTTATCTCTTGAACT+AGG 0.543050 5.1:+4766778 MS.gene20359:CDS
TATTCACCAATCCACGATGA+AGG 0.544265 5.1:-4767083 None:intergenic
ATTACTAACGTATAATCAGC+AGG 0.548828 5.1:-4765729 None:intergenic
TTATTATACAAACATGGAAA+CGG 0.548890 5.1:+4765233 None:intergenic
AACTAGGATTGGAAGGAGGA+AGG 0.567524 5.1:+4766794 MS.gene20359:CDS
CCTCAGCCAGAGCTAGCACT+TGG 0.570476 5.1:+4766886 MS.gene20359:CDS
AAAGAAGAGTTAACAAACAT+AGG 0.572842 5.1:+4765324 MS.gene20359:CDS
CTGGGACCATATTATGGAGG+AGG 0.581004 5.1:-4766945 None:intergenic
AAGTATCCTTCATCGTGGAT+TGG 0.581851 5.1:+4767077 MS.gene20359:CDS
AAGTGAACTTACATCTGTAT+GGG 0.583824 5.1:-4766917 None:intergenic
CATAGAAAAGTTGCAAACCT+GGG 0.593454 5.1:-4766963 None:intergenic
GTTGAAAGCTTAGCCTTGAG+TGG 0.594566 5.1:+4765267 MS.gene20359:CDS
GAAGCTTAAGAAAGCTGCAG+AGG 0.604993 5.1:+4765449 MS.gene20359:CDS
GATTGATGCTATACCACTCA+AGG 0.616412 5.1:-4765280 None:intergenic
ACAATTGAGATACTTAGCAA+TGG 0.617144 5.1:+4767045 MS.gene20359:CDS
CAAGTGCTAGCTCTGGCTGA+GGG 0.640524 5.1:-4766885 None:intergenic
AAATTAGCTAACAATGCTAG+TGG 0.642740 5.1:+4765627 MS.gene20359:CDS
GGTTACAAGTGAATATGCAA+AGG 0.645291 5.1:+4766726 MS.gene20359:CDS
TGCTGAGCAAAAGTGCGAGG+TGG 0.649651 5.1:-4767213 None:intergenic
TAAGATCATCAGATATACCA+TGG 0.652279 5.1:-4765497 None:intergenic
AAGAAAGCTGCAGAGGAATG+GGG 0.653446 5.1:+4765456 MS.gene20359:CDS
TACAAAAGTATCCTTCATCG+TGG 0.668677 5.1:+4767072 MS.gene20359:CDS
CTTGAACTAGGATTGGAAGG+AGG 0.674989 5.1:+4766790 MS.gene20359:CDS
TTATACAAACATGGAAACGG+TGG 0.679669 5.1:+4765236 None:intergenic
AACCTGGGACCATATTATGG+AGG 0.688079 5.1:-4766948 None:intergenic
GTGATGCATCTAGTGAACCA+TGG 0.722158 5.1:+4765480 MS.gene20359:CDS
ATATGCTGAGCAAAAGTGCG+AGG 0.769261 5.1:-4767216 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTATTGATATTACAAT+TGG + chr5.1:4766621-4766640 MS.gene20359:intron 10.0%
!!! ATATTTCCTTATTTATAATT+TGG + chr5.1:4765934-4765953 MS.gene20359:intron 10.0%
!! AAAACATGCAAAAAATAATA+AGG - chr5.1:4766671-4766690 None:intergenic 15.0%
!! GAAAGAAAAAAATAATGAAA+TGG - chr5.1:4766474-4766493 None:intergenic 15.0%
!! TTAAATTGATAAGAGAAAAA+AGG - chr5.1:4766332-4766351 None:intergenic 15.0%
!!! ACAAAAAACTTATTTTTACA+TGG - chr5.1:4766523-4766542 None:intergenic 15.0%
!!! TTCTATTTTAATATTGAGTT+TGG + chr5.1:4766206-4766225 MS.gene20359:intron 15.0%
!!! TTCTTTTATTAGATTCTAAA+GGG + chr5.1:4766287-4766306 MS.gene20359:intron 15.0%
!!! TTTCTTTTATTAGATTCTAA+AGG + chr5.1:4766286-4766305 MS.gene20359:intron 15.0%
!! AAAAAAACCAAAGAATGAAT+TGG - chr5.1:4765789-4765808 None:intergenic 20.0%
!! AGACTACCAAATTATAAATA+AGG - chr5.1:4765943-4765962 None:intergenic 20.0%
!! CAAAAAATGGAATATTTAGA+AGG - chr5.1:4766567-4766586 None:intergenic 20.0%
!! CACAAAGAAGAAAAATATAA+GGG + chr5.1:4766088-4766107 MS.gene20359:intron 20.0%
!! TCACAAAGAAGAAAAATATA+AGG + chr5.1:4766087-4766106 MS.gene20359:intron 20.0%
!!! ACAATTATGATTTTTGACTT+GGG - chr5.1:4765871-4765890 None:intergenic 20.0%
!!! ATATTCATCACAAACTTTTT+AGG + chr5.1:4767235-4767254 MS.gene20359:CDS 20.0%
!!! TAATTTTCCAATTCATTCTT+TGG + chr5.1:4765779-4765798 MS.gene20359:intron 20.0%
!!! TACAATTATGATTTTTGACT+TGG - chr5.1:4765872-4765891 None:intergenic 20.0%
! AAAGAAGAGTTAACAAACAT+AGG + chr5.1:4765324-4765343 MS.gene20359:CDS 25.0%
! AGGAAAAAGTTAGAATATCT+TGG + chr5.1:4767106-4767125 MS.gene20359:CDS 25.0%
! ATTGATAAGAGAAAAAAGGT+TGG - chr5.1:4766328-4766347 None:intergenic 25.0%
! GGAAAAAGTTAGAATATCTT+GGG + chr5.1:4767107-4767126 MS.gene20359:CDS 25.0%
! TAATGGTCAAACACAAAAAA+TGG - chr5.1:4766580-4766599 None:intergenic 25.0%
! TCAAGTCAAAAAGTTACTAA+TGG + chr5.1:4766180-4766199 MS.gene20359:intron 25.0%
! TTTGAGGAAGAAAAAAAAGA+AGG + chr5.1:4765354-4765373 MS.gene20359:CDS 25.0%
!! AATCGTAAAATTGCGATTTT+TGG - chr5.1:4765843-4765862 None:intergenic 25.0%
!! ATAAACGTGATTTGTCTATA+TGG + chr5.1:4765697-4765716 MS.gene20359:CDS 25.0%
!! ATCGTAAAATTGCGATTTTT+GGG - chr5.1:4765842-4765861 None:intergenic 25.0%
!! TATTTCTCTTTTTCTTCAAC+AGG - chr5.1:4765564-4765583 None:intergenic 25.0%
!! TTCAGAATAATTTTCTCCTT+AGG - chr5.1:4767150-4767169 None:intergenic 25.0%
!! TTTTAATATTGAGTTTGGCT+TGG + chr5.1:4766211-4766230 MS.gene20359:intron 25.0%
!! TTTTCTTCTTTGTGATGATT+TGG - chr5.1:4766082-4766101 None:intergenic 25.0%
!!! AATGTCATTTGTGTTTTACT+TGG - chr5.1:4766434-4766453 None:intergenic 25.0%
!!! ATACATGTGTTTTTGAAATC+TGG - chr5.1:4766373-4766392 None:intergenic 25.0%
!!! ATGTTTGTTAACTCTTCTTT+TGG - chr5.1:4765324-4765343 None:intergenic 25.0%
!!! ATTTCTTTTAGGTCTATTGT+TGG - chr5.1:4765390-4765409 None:intergenic 25.0%
!!! TACATGTGTTTTTGAAATCT+GGG - chr5.1:4766372-4766391 None:intergenic 25.0%
AAACATAGGTAACATCTTTG+AGG + chr5.1:4765338-4765357 MS.gene20359:CDS 30.0%
AAACCACTCAAAAAAAGATG+AGG - chr5.1:4765905-4765924 None:intergenic 30.0%
AAATTAGCTAACAATGCTAG+TGG + chr5.1:4765627-4765646 MS.gene20359:CDS 30.0%
AACCACTCAAAAAAAGATGA+GGG - chr5.1:4765904-4765923 None:intergenic 30.0%
AAGTGAACTTACATCTGTAT+GGG - chr5.1:4766920-4766939 None:intergenic 30.0%
ACAATTGAGATACTTAGCAA+TGG + chr5.1:4767045-4767064 MS.gene20359:CDS 30.0%
ATATGCATGAGAATTGAATC+AGG - chr5.1:4767018-4767037 None:intergenic 30.0%
ATGCAAATGATCAAAGTTCA+GGG + chr5.1:4765583-4765602 MS.gene20359:CDS 30.0%
ATTAATCGTTTGAAGAAAGC+TGG + chr5.1:4765519-4765538 MS.gene20359:CDS 30.0%
ATTACTAACGTATAATCAGC+AGG - chr5.1:4765732-4765751 None:intergenic 30.0%
GATTCAATTCTCATGCATAT+TGG + chr5.1:4767018-4767037 MS.gene20359:CDS 30.0%
TAAGATCATCAGATATACCA+TGG - chr5.1:4765500-4765519 None:intergenic 30.0%
TAAGTGAAAAAGAACCAACA+AGG + chr5.1:4767187-4767206 MS.gene20359:CDS 30.0%
TAAGTGAACTTACATCTGTA+TGG - chr5.1:4766921-4766940 None:intergenic 30.0%
TATGCAAATGATCAAAGTTC+AGG + chr5.1:4765582-4765601 MS.gene20359:CDS 30.0%
TCTTCAGATGAAATAGTTAG+AGG + chr5.1:4765414-4765433 MS.gene20359:CDS 30.0%
! AGAATAATTTTCTCCTTAGG+TGG - chr5.1:4767147-4767166 None:intergenic 30.0%
! TTGGTCTCACATATTCTTTT+GGG - chr5.1:4765305-4765324 None:intergenic 30.0%
! TTTGGTCTCACATATTCTTT+TGG - chr5.1:4765306-4765325 None:intergenic 30.0%
!! CTGAAGAGCTTATTTCTTTT+AGG - chr5.1:4765401-4765420 None:intergenic 30.0%
!! TCATCACAAACTTTTTAGGA+AGG + chr5.1:4767239-4767258 MS.gene20359:CDS 30.0%
!! TCTTTTTCACTTACAAGTTC+AGG - chr5.1:4767180-4767199 None:intergenic 30.0%
AAAGCTATGCAAAACGCTAA+TGG - chr5.1:4766597-4766616 None:intergenic 35.0%
CAATATATGACGCTACATGA+AGG + chr5.1:4766036-4766055 MS.gene20359:intron 35.0%
CATAGAAAAGTTGCAAACCT+GGG - chr5.1:4766966-4766985 None:intergenic 35.0%
GGTTACAAGTGAATATGCAA+AGG + chr5.1:4766726-4766745 MS.gene20359:CDS 35.0%
GTTATCTCTTGAACTAGGAT+TGG + chr5.1:4766783-4766802 MS.gene20359:CDS 35.0%
TACATTCCTCCTCCATAATA+TGG + chr5.1:4766939-4766958 MS.gene20359:CDS 35.0%
TCATAGAAAAGTTGCAAACC+TGG - chr5.1:4766967-4766986 None:intergenic 35.0%
TTATTGACATAGTACCCAGT+TGG + chr5.1:4766001-4766020 MS.gene20359:intron 35.0%
! AACTTTTCTATGAGGGCAAA+TGG + chr5.1:4766974-4766993 MS.gene20359:CDS 35.0%
! ACTTTTCTATGAGGGCAAAT+GGG + chr5.1:4766975-4766994 MS.gene20359:CDS 35.0%
! AGGTTTGCAACTTTTCTATG+AGG + chr5.1:4766966-4766985 MS.gene20359:CDS 35.0%
! CTTTCATTGCATTTTTCCAG+AGG + chr5.1:4765674-4765693 MS.gene20359:CDS 35.0%
! GAAGTGTTATCTCTTGAACT+AGG + chr5.1:4766778-4766797 MS.gene20359:CDS 35.0%
! GGTTTGCAACTTTTCTATGA+GGG + chr5.1:4766967-4766986 MS.gene20359:CDS 35.0%
!! CAAACTTTTTAGGAAGGATG+AGG + chr5.1:4767245-4767264 MS.gene20359:CDS 35.0%
!! TACAAAAGTATCCTTCATCG+TGG + chr5.1:4767072-4767091 MS.gene20359:CDS 35.0%
AAGTATCCTTCATCGTGGAT+TGG + chr5.1:4767077-4767096 MS.gene20359:CDS 40.0%
AGAAAAAGAAGCTGGTGGAA+TGG + chr5.1:4766819-4766838 MS.gene20359:CDS 40.0%
AGGTCTATTGTTGGAACTTG+AGG - chr5.1:4765381-4765400 None:intergenic 40.0%
AGGTTAGAAAAAGAAGCTGG+TGG + chr5.1:4766814-4766833 MS.gene20359:CDS 40.0%
AGTCCTAGCTAGCAAGATAA+TGG + chr5.1:4766756-4766775 MS.gene20359:CDS 40.0%
ATGCTAGTGGTCAACTTGAA+TGG + chr5.1:4765640-4765659 MS.gene20359:CDS 40.0%
CAAAGTTCAGGGAAGATTCA+AGG + chr5.1:4765594-4765613 MS.gene20359:CDS 40.0%
CTTCCATTATCTTGCTAGCT+AGG - chr5.1:4766762-4766781 None:intergenic 40.0%
GACAAATCACGTTTATCCTC+TGG - chr5.1:4765693-4765712 None:intergenic 40.0%
GATTGATGCTATACCACTCA+AGG - chr5.1:4765283-4765302 None:intergenic 40.0%
GGAAGGTTAGAAAAAGAAGC+TGG + chr5.1:4766811-4766830 MS.gene20359:CDS 40.0%
GTATAATCAGCAGGTGTCTT+AGG - chr5.1:4765723-4765742 None:intergenic 40.0%
TAAGAAAGCTGCAGAGGAAT+GGG + chr5.1:4765455-4765474 MS.gene20359:CDS 40.0%
TATTCACCAATCCACGATGA+AGG - chr5.1:4767086-4767105 None:intergenic 40.0%
TCACTTACAAGTTCAGGAAG+TGG - chr5.1:4767174-4767193 None:intergenic 40.0%
TCAGGGAAGATTCAAGGTTA+TGG + chr5.1:4765600-4765619 MS.gene20359:CDS 40.0%
TCTCTTGAACTAGGATTGGA+AGG + chr5.1:4766787-4766806 MS.gene20359:CDS 40.0%
TGCTAGTGGTCAACTTGAAT+GGG + chr5.1:4765641-4765660 MS.gene20359:CDS 40.0%
TTAAGAAAGCTGCAGAGGAA+TGG + chr5.1:4765454-4765473 MS.gene20359:CDS 40.0%
! AGTGTTTTGTGAACCACCTA+AGG + chr5.1:4767131-4767150 MS.gene20359:CDS 40.0%
!! ACTTTTTAGGAAGGATGAGG+AGG + chr5.1:4767248-4767267 MS.gene20359:CDS 40.0%
!! TCATCGTGGATTGGTGAATA+AGG + chr5.1:4767086-4767105 MS.gene20359:CDS 40.0%
!!! GACCCTCATCTTTTTTTGAG+TGG + chr5.1:4765899-4765918 MS.gene20359:intron 40.0%
AACCTGGGACCATATTATGG+AGG - chr5.1:4766951-4766970 None:intergenic 45.0%
AACTAGGATTGGAAGGAGGA+AGG + chr5.1:4766794-4766813 MS.gene20359:CDS 45.0%
AAGAAAGCTGCAGAGGAATG+GGG + chr5.1:4765456-4765475 MS.gene20359:CDS 45.0%
CGTCATATATTGACCGACAC+TGG - chr5.1:4766028-4766047 None:intergenic 45.0%
CTTGAACTAGGATTGGAAGG+AGG + chr5.1:4766790-4766809 MS.gene20359:CDS 45.0%
GAAGCTTAAGAAAGCTGCAG+AGG + chr5.1:4765449-4765468 MS.gene20359:CDS 45.0%
GCAAACCTGGGACCATATTA+TGG - chr5.1:4766954-4766973 None:intergenic 45.0%
GTGATGCATCTAGTGAACCA+TGG + chr5.1:4765480-4765499 MS.gene20359:CDS 45.0%
! ATATGCTGAGCAAAAGTGCG+AGG - chr5.1:4767219-4767238 None:intergenic 45.0%
! TTTGGTGTATGCATGCAGTG+AGG + chr5.1:4766705-4766724 MS.gene20359:intron 45.0%
!! GTTGAAAGCTTAGCCTTGAG+TGG + chr5.1:4765267-4765286 MS.gene20359:CDS 45.0%
!!! TTTTATCAAAATAATTTTTT+TGG + chr5.1:4766687-4766706 MS.gene20359:intron 5.0%
CTCCTCCATAATATGGTCCC+AGG + chr5.1:4766946-4766965 MS.gene20359:CDS 50.0%
CTGGGACCATATTATGGAGG+AGG - chr5.1:4766948-4766967 None:intergenic 50.0%
TCAACTCCAAGTGCTAGCTC+TGG - chr5.1:4766895-4766914 None:intergenic 50.0%
GCTCTGGCTGAGGGCAAATT+GGG - chr5.1:4766879-4766898 None:intergenic 55.0%
GTACCCAGTTGGACCAGTGT+CGG + chr5.1:4766012-4766031 MS.gene20359:intron 55.0%
GTGCGAGGTGGAAACCTTGT+TGG - chr5.1:4767204-4767223 None:intergenic 55.0%
TGACCGACACTGGTCCAACT+GGG - chr5.1:4766018-4766037 None:intergenic 55.0%
TTGACCGACACTGGTCCAAC+TGG - chr5.1:4766019-4766038 None:intergenic 55.0%
! AGCTCTGGCTGAGGGCAAAT+TGG - chr5.1:4766880-4766899 None:intergenic 55.0%
! TGCTGAGCAAAAGTGCGAGG+TGG - chr5.1:4767216-4767235 None:intergenic 55.0%
!! CAAGTGCTAGCTCTGGCTGA+GGG - chr5.1:4766888-4766907 None:intergenic 55.0%
CCTCAGCCAGAGCTAGCACT+TGG + chr5.1:4766886-4766905 MS.gene20359:CDS 60.0%
!! CCAAGTGCTAGCTCTGGCTG+AGG - chr5.1:4766889-4766908 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 4765246 4767296 4765246 ID=MS.gene20359
chr5.1 mRNA 4765246 4767296 4765246 ID=MS.gene20359.t1;Parent=MS.gene20359
chr5.1 exon 4765246 4765742 4765246 ID=MS.gene20359.t1.exon1;Parent=MS.gene20359.t1
chr5.1 CDS 4765246 4765742 4765246 ID=cds.MS.gene20359.t1;Parent=MS.gene20359.t1
chr5.1 exon 4766723 4767296 4766723 ID=MS.gene20359.t1.exon2;Parent=MS.gene20359.t1
chr5.1 CDS 4766723 4767296 4766723 ID=cds.MS.gene20359.t1;Parent=MS.gene20359.t1
Gene Sequence

>MS.gene20359

ATGGAAACGGTGGCTCAAAGAGTTGAAAGCTTAGCCTTGAGTGGTATAGCATCAATCCCAAAAGAATATGTGAGACCAAAAGAAGAGTTAACAAACATAGGTAACATCTTTGAGGAAGAAAAAAAAGAAGGTCCTCAAGTTCCAACAATAGACCTAAAAGAAATAAGCTCTTCAGATGAAATAGTTAGAGGAAAATGTAGAGAGAAGCTTAAGAAAGCTGCAGAGGAATGGGGTGTGATGCATCTAGTGAACCATGGTATATCTGATGATCTTATTAATCGTTTGAAGAAAGCTGGTGAAACATTTTTTGAGCTTCCTGTTGAAGAAAAAGAGAAATATGCAAATGATCAAAGTTCAGGGAAGATTCAAGGTTATGGAAGTAAATTAGCTAACAATGCTAGTGGTCAACTTGAATGGGAAGATTATTTCTTTCATTGCATTTTTCCAGAGGATAAACGTGATTTGTCTATATGGCCTAAGACACCTGCTGATTATACGTTAGTAATTTCTTCTGTGTATACTTTCTCTTCTCATAATTTTCCAATTCATTCTTTGGTTTTTTTTATTTTAAAAAAACTTAATTGTAGTTTTGACCCAAAAATCGCAATTTTACGATTTTTGACCCAAGTCAAAAATCATAATTGTATGATTTTGACCCTCATCTTTTTTTGAGTGGTTTTGATCTCTTATATTTCCTTATTTATAATTTGGTAGTCTCTCAATTTTCATCGAAATTAATGTTGCTGTAGCATCAATTATTGACATAGTACCCAGTTGGACCAGTGTCGGTCAATATATGACGCTACATGAAGGTAAGTTTGAGAGAGAGACTACCAAATCATCACAAAGAAGAAAAATATAAGGGACTACAATCGCTCAAAAAATAGTAGAGTGTCACAATCGCACAATTGTAATCAGAGCGCAAAAATCACAATCAAGTCAAAAAGTTACTAATGGTGTTTCTATTTTAATATTGAGTTTGGCTTGGTAAAAAAATTTATTGTACAAGTTATGTTTAAAATATGAAATTAATATATTGATTTCTTTTATTAGATTCTAAAGGGAAAAATAAAATAGAACCAACCTTTTTTCTCTTATCAATTTAAATTAGTGAGATATATAACCCAGATTTCAAAAACACATGTATGTCTGTTTCTTTTCTTAATTCTCACTTAGTTATTGTATCCAAGTAAAACACAAATGACATTGATTATATTTTGATTAACCATTTCATTATTTTTTTCTTTCTAGAAATGCTTAAATATGTCTTTACTCCATGTAAAAATAAGTTTTTTGTTTTTTTGTTTTTGTTTTTAGACCTTCTAAATATTCCATTTTTTGTGTTTGACCATTAGCGTTTTGCATAGCTTTCATAAAATTTATTGATATTACAATTGGTATATATGTAATTTTCATTTTAATCCTTATTATTTTTTGCATGTTTTATCAAAATAATTTTTTTGGTGTATGCATGCAGTGAGGTTACAAGTGAATATGCAAAGGAATTAAGAGTCCTAGCTAGCAAGATAATGGAAGTGTTATCTCTTGAACTAGGATTGGAAGGAGGAAGGTTAGAAAAAGAAGCTGGTGGAATGGAAGAGCTTTTACTTCAAATGAAAATTAATTACTACCCAATTTGCCCTCAGCCAGAGCTAGCACTTGGAGTTGAAGCCCATACAGATGTAAGTTCACTTACATTCCTCCTCCATAATATGGTCCCAGGTTTGCAACTTTTCTATGAGGGCAAATGGGTCACTGCAAAATGTGTACCTGATTCAATTCTCATGCATATTGGTGACACAATTGAGATACTTAGCAATGGAAAGTACAAAAGTATCCTTCATCGTGGATTGGTGAATAAGGAAAAAGTTAGAATATCTTGGGCAGTGTTTTGTGAACCACCTAAGGAGAAAATTATTCTGAAGCCACTTCCTGAACTTGTAAGTGAAAAAGAACCAACAAGGTTTCCACCTCGCACTTTTGCTCAGCATATTCATCACAAACTTTTTAGGAAGGATGAGGAGGAGAAGAAAGATGATCCCAAAAAATGA

Protein sequence

>MS.gene20359.t1

METVAQRVESLALSGIASIPKEYVRPKEELTNIGNIFEEEKKEGPQVPTIDLKEISSSDEIVRGKCREKLKKAAEEWGVMHLVNHGISDDLINRLKKAGETFFELPVEEKEKYANDQSSGKIQGYGSKLANNASGQLEWEDYFFHCIFPEDKRDLSIWPKTPADYTEVTSEYAKELRVLASKIMEVLSLELGLEGGRLEKEAGGMEELLLQMKINYYPICPQPELALGVEAHTDVSSLTFLLHNMVPGLQLFYEGKWVTAKCVPDSILMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVSEKEPTRFPPRTFAQHIHHKLFRKDEEEKKDDPKK