Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046366.t1 | XP_013444676.1 | 93.2 | 575 | 39 | 0 | 1 | 575 | 8 | 582 | 0.00E+00 | 1088.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046366.t1 | A0A314KSQ4 | 68.2 | 575 | 182 | 1 | 1 | 574 | 5 | 579 | 7.3e-242 | 837.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046366.t1 | A0A072TNA7 | 93.2 | 575 | 39 | 0 | 1 | 575 | 8 | 582 | 0.0e+00 | 1088.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene25516 | MS.gene046366 | PPI |
| MS.gene046366 | MS.gene046033 | PPI |
| MS.gene053964 | MS.gene046366 | PPI |
| MS.gene36841 | MS.gene046366 | PPI |
| MS.gene064168 | MS.gene046366 | PPI |
| MS.gene95748 | MS.gene046366 | PPI |
| MS.gene045936 | MS.gene046366 | PPI |
| MS.gene78774 | MS.gene046366 | PPI |
| MS.gene34650 | MS.gene046366 | PPI |
| MS.gene046366 | MS.gene99230 | PPI |
| MS.gene073214 | MS.gene046366 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046366.t1 | MTR_8g027955 | 93.217 | 575 | 39 | 0 | 1 | 575 | 8 | 582 | 0.0 | 1115 |
| MS.gene046366.t1 | MTR_8g027920 | 88.696 | 575 | 65 | 0 | 1 | 575 | 1 | 575 | 0.0 | 1070 |
| MS.gene046366.t1 | MTR_8g027965 | 89.043 | 575 | 63 | 0 | 1 | 575 | 1 | 575 | 0.0 | 1064 |
| MS.gene046366.t1 | MTR_8g027970 | 79.304 | 575 | 119 | 0 | 1 | 575 | 1 | 575 | 0.0 | 973 |
| MS.gene046366.t1 | MTR_7g117110 | 73.575 | 579 | 149 | 1 | 1 | 575 | 1 | 579 | 0.0 | 913 |
| MS.gene046366.t1 | MTR_7g117110 | 74.378 | 402 | 99 | 1 | 1 | 398 | 1 | 402 | 0.0 | 633 |
| MS.gene046366.t1 | MTR_0102s0060 | 45.548 | 584 | 298 | 8 | 9 | 575 | 17 | 597 | 0.0 | 535 |
| MS.gene046366.t1 | MTR_5g016320 | 39.175 | 582 | 335 | 8 | 5 | 573 | 15 | 590 | 1.65e-144 | 430 |
| MS.gene046366.t1 | MTR_8g037720 | 62.305 | 321 | 95 | 2 | 259 | 575 | 137 | 435 | 2.36e-138 | 409 |
| MS.gene046366.t1 | MTR_8g037720 | 65.957 | 141 | 48 | 0 | 10 | 150 | 1 | 141 | 4.38e-54 | 190 |
| MS.gene046366.t1 | MTR_8g467000 | 36.960 | 579 | 343 | 7 | 11 | 571 | 15 | 589 | 1.95e-135 | 407 |
| MS.gene046366.t1 | MTR_0035s0150 | 38.053 | 565 | 336 | 8 | 12 | 571 | 21 | 576 | 6.65e-135 | 405 |
| MS.gene046366.t1 | MTR_2g081860 | 37.113 | 582 | 341 | 7 | 11 | 571 | 14 | 591 | 2.58e-133 | 402 |
| MS.gene046366.t1 | MTR_4g045903 | 37.043 | 575 | 342 | 7 | 11 | 572 | 30 | 597 | 8.08e-133 | 400 |
| MS.gene046366.t1 | MTR_1g088765 | 37.790 | 561 | 326 | 11 | 11 | 550 | 11 | 569 | 5.56e-123 | 375 |
| MS.gene046366.t1 | MTR_1g047730 | 62.977 | 262 | 82 | 3 | 318 | 575 | 112 | 362 | 5.56e-114 | 343 |
| MS.gene046366.t1 | MTR_1g047730 | 45.806 | 155 | 39 | 3 | 10 | 163 | 1 | 111 | 1.41e-27 | 114 |
| MS.gene046366.t1 | MTR_1g088765 | 38.407 | 427 | 241 | 10 | 142 | 550 | 3 | 425 | 7.26e-93 | 292 |
| MS.gene046366.t1 | MTR_7g094190 | 31.424 | 576 | 358 | 15 | 11 | 561 | 5 | 568 | 2.76e-85 | 276 |
| MS.gene046366.t1 | MTR_7g094190 | 31.364 | 440 | 272 | 12 | 140 | 561 | 41 | 468 | 6.08e-63 | 214 |
| MS.gene046366.t1 | MTR_7g094330 | 32.222 | 270 | 146 | 6 | 140 | 405 | 41 | 277 | 9.22e-37 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046366.t1 | AT2G46370 | 64.818 | 577 | 198 | 4 | 1 | 574 | 12 | 586 | 0.0 | 796 |
| MS.gene046366.t1 | AT2G46370 | 64.818 | 577 | 198 | 4 | 1 | 574 | 1 | 575 | 0.0 | 796 |
| MS.gene046366.t1 | AT2G46370 | 64.818 | 577 | 198 | 4 | 1 | 574 | 1 | 575 | 0.0 | 796 |
| MS.gene046366.t1 | AT2G46370 | 65.863 | 498 | 167 | 2 | 78 | 574 | 1 | 496 | 0.0 | 712 |
| MS.gene046366.t1 | AT4G03400 | 47.350 | 585 | 286 | 8 | 11 | 575 | 9 | 591 | 0.0 | 548 |
| MS.gene046366.t1 | AT4G03400 | 47.350 | 585 | 286 | 8 | 11 | 575 | 9 | 591 | 0.0 | 548 |
| MS.gene046366.t1 | AT4G27260 | 39.262 | 596 | 330 | 9 | 2 | 571 | 7 | 596 | 1.35e-143 | 429 |
| MS.gene046366.t1 | AT2G23170 | 39.649 | 570 | 331 | 7 | 12 | 573 | 21 | 585 | 5.08e-142 | 424 |
| MS.gene046366.t1 | AT4G37390 | 38.957 | 575 | 331 | 9 | 12 | 571 | 22 | 591 | 1.90e-139 | 417 |
| MS.gene046366.t1 | AT1G23160 | 38.947 | 570 | 325 | 9 | 17 | 572 | 18 | 578 | 3.63e-139 | 416 |
| MS.gene046366.t1 | AT2G14960 | 39.298 | 570 | 327 | 9 | 12 | 573 | 21 | 579 | 3.89e-139 | 416 |
| MS.gene046366.t1 | AT1G59500 | 40.035 | 572 | 323 | 10 | 12 | 571 | 22 | 585 | 2.85e-137 | 412 |
| MS.gene046366.t1 | AT5G54510 | 38.112 | 572 | 332 | 8 | 18 | 571 | 29 | 596 | 9.29e-136 | 408 |
| MS.gene046366.t1 | AT5G13320 | 38.169 | 579 | 334 | 10 | 8 | 571 | 5 | 574 | 1.13e-133 | 402 |
| MS.gene046366.t1 | AT5G13320 | 38.169 | 579 | 334 | 10 | 8 | 571 | 5 | 574 | 1.13e-133 | 402 |
| MS.gene046366.t1 | AT5G13320 | 38.169 | 579 | 334 | 10 | 8 | 571 | 20 | 589 | 1.55e-133 | 402 |
| MS.gene046366.t1 | AT1G48660 | 37.018 | 570 | 339 | 9 | 14 | 571 | 7 | 568 | 4.03e-131 | 395 |
| MS.gene046366.t1 | AT5G51470 | 39.054 | 571 | 330 | 8 | 11 | 571 | 9 | 571 | 1.06e-130 | 394 |
| MS.gene046366.t1 | AT1G48660 | 36.684 | 567 | 342 | 8 | 14 | 571 | 7 | 565 | 2.13e-130 | 393 |
| MS.gene046366.t1 | AT2G47750 | 37.586 | 580 | 344 | 10 | 5 | 571 | 3 | 577 | 1.57e-123 | 376 |
| MS.gene046366.t1 | AT5G13350 | 35.763 | 590 | 347 | 16 | 4 | 571 | 1 | 580 | 1.89e-121 | 371 |
| MS.gene046366.t1 | AT5G13350 | 35.763 | 590 | 347 | 16 | 4 | 571 | 1 | 580 | 1.89e-121 | 371 |
| MS.gene046366.t1 | AT5G13360 | 36.897 | 580 | 340 | 13 | 9 | 571 | 9 | 579 | 4.47e-121 | 370 |
| MS.gene046366.t1 | AT5G13360 | 36.897 | 580 | 340 | 13 | 9 | 571 | 9 | 579 | 4.47e-121 | 370 |
| MS.gene046366.t1 | AT5G13360 | 36.897 | 580 | 340 | 13 | 9 | 571 | 87 | 657 | 3.02e-120 | 370 |
| MS.gene046366.t1 | AT5G13370 | 36.780 | 590 | 341 | 15 | 4 | 571 | 1 | 580 | 3.94e-120 | 367 |
| MS.gene046366.t1 | AT1G28130 | 36.060 | 599 | 336 | 12 | 9 | 571 | 9 | 596 | 1.07e-118 | 364 |
| MS.gene046366.t1 | AT5G13380 | 36.411 | 574 | 335 | 13 | 17 | 571 | 47 | 609 | 8.02e-116 | 357 |
| MS.gene046366.t1 | AT5G51470 | 38.302 | 483 | 282 | 6 | 98 | 571 | 6 | 481 | 2.15e-105 | 326 |
| MS.gene046366.t1 | AT1G48670 | 33.510 | 567 | 307 | 11 | 16 | 571 | 10 | 517 | 4.78e-99 | 311 |
| MS.gene046366.t1 | AT1G48670 | 38.250 | 400 | 231 | 8 | 181 | 571 | 14 | 406 | 4.76e-91 | 286 |
| MS.gene046366.t1 | AT1G28130 | 35.982 | 453 | 247 | 9 | 152 | 571 | 11 | 453 | 1.59e-88 | 281 |
| MS.gene046366.t1 | AT1G48690 | 35.106 | 188 | 117 | 3 | 14 | 200 | 7 | 190 | 4.28e-26 | 105 |
Find 110 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACATGCCTTGAAGCTTTC+AGG | 0.188228 | 8.3:-65786434 | None:intergenic |
| TCAGAACATTTGAACAAGTT+TGG | 0.223044 | 8.3:+65787631 | MS.gene046366:CDS |
| CCTAATGCTAAGTATGTTCT+AGG | 0.223934 | 8.3:+65787825 | MS.gene046366:CDS |
| AACATAGTGTCCTGGTTCTT+TGG | 0.254133 | 8.3:-65789051 | None:intergenic |
| CATAATGCTCAAGAATCTTC+TGG | 0.275515 | 8.3:-65789229 | None:intergenic |
| ATTGGTCACTTACAAAGATT+TGG | 0.278435 | 8.3:+65786460 | MS.gene046366:CDS |
| CTTGAGCATTATGTTGGATT+AGG | 0.283059 | 8.3:+65789239 | MS.gene046366:CDS |
| GCTAACTCAGGAGCCTCTTT+AGG | 0.283945 | 8.3:-65787966 | None:intergenic |
| CCTCTGTTGACTTCTGAATA+TGG | 0.289061 | 8.3:+65787909 | MS.gene046366:CDS |
| CCTAGAACATACTTAGCATT+AGG | 0.297424 | 8.3:-65787825 | None:intergenic |
| GTTGTTAGTTGAGGAGAAAA+TGG | 0.315180 | 8.3:+65788995 | MS.gene046366:CDS |
| CAGAACATTTGAACAAGTTT+GGG | 0.318569 | 8.3:+65787632 | MS.gene046366:CDS |
| ATTCCTTTGAATCAACTTGA+TGG | 0.320686 | 8.3:+65788029 | MS.gene046366:CDS |
| CAGGACACTATGTTATCTTC+TGG | 0.331531 | 8.3:+65789060 | MS.gene046366:CDS |
| TGGATCAAGTTAGCTAGTTC+AGG | 0.340099 | 8.3:-65787750 | None:intergenic |
| TCAACTATTCTATTGATATA+AGG | 0.342032 | 8.3:-65786485 | None:intergenic |
| TTGCAGGCTTATACAGATAT+AGG | 0.345650 | 8.3:+65788829 | MS.gene046366:intron |
| AAGTTAGCTAGTTCAGGATT+TGG | 0.373912 | 8.3:-65787744 | None:intergenic |
| CAAAGTGTTGCAAATATTGT+TGG | 0.376494 | 8.3:+65789313 | MS.gene046366:CDS |
| TGATGAATGTTGCACATGTT+TGG | 0.385814 | 8.3:+65789115 | MS.gene046366:CDS |
| TAGAGTGATTGGTGAAAATC+TGG | 0.387996 | 8.3:-65787525 | None:intergenic |
| CTTAAGGAAATATCAGTGAT+TGG | 0.397201 | 8.3:-65786539 | None:intergenic |
| AACTGATCCTGAAAGCTTCA+AGG | 0.401122 | 8.3:+65786427 | MS.gene046366:CDS |
| AATGCATAGGATTGAGCAAT+TGG | 0.406780 | 8.3:+65787778 | MS.gene046366:CDS |
| CTAGAACATACTTAGCATTA+GGG | 0.409837 | 8.3:-65787824 | None:intergenic |
| TCCGAACAAGTCGGAGTTCA+AGG | 0.425031 | 8.3:-65789196 | None:intergenic |
| GGACTGAATATTACATCATC+TGG | 0.427889 | 8.3:-65787504 | None:intergenic |
| AGCAAATTATCACAAACAAA+AGG | 0.430347 | 8.3:+65787390 | MS.gene046366:CDS |
| GCAAATTATCACAAACAAAA+GGG | 0.434836 | 8.3:+65787391 | MS.gene046366:CDS |
| CTGCAAAGAAACTTGATCTC+TGG | 0.436174 | 8.3:-65788894 | None:intergenic |
| CAATCACTGATATTTCCTTA+AGG | 0.436796 | 8.3:+65786540 | MS.gene046366:CDS |
| CAACAATATTTGCAACACTT+TGG | 0.436954 | 8.3:-65789312 | None:intergenic |
| TGCAACACTTTGGTGTTTGT+AGG | 0.437781 | 8.3:-65789302 | None:intergenic |
| AAGATTCTTGAGCATTATGT+TGG | 0.450012 | 8.3:+65789233 | MS.gene046366:CDS |
| CTTGTTCCTAAAGACAAAAG+AGG | 0.450622 | 8.3:-65786736 | None:intergenic |
| GAATCAACTTGATGGAACTA+AGG | 0.452348 | 8.3:+65788037 | MS.gene046366:CDS |
| ATTTACAGTACCTGCAGGAT+TGG | 0.452654 | 8.3:-65788123 | None:intergenic |
| TATATCAATAGAATAGTTGA+TGG | 0.455629 | 8.3:+65786488 | MS.gene046366:CDS |
| CAATGTTGATTGTGAGCATA+AGG | 0.455989 | 8.3:-65788923 | None:intergenic |
| TTCAAGACACCTAGGTGTAT+TGG | 0.458890 | 8.3:+65789278 | MS.gene046366:CDS |
| AATTCAAAGTAAGCAATTTG+AGG | 0.463474 | 8.3:-65788005 | None:intergenic |
| AATATGGTGCTTCTGAGGGT+TGG | 0.467338 | 8.3:+65787925 | MS.gene046366:CDS |
| TGCAGCTCTGGTACTAGTCA+AGG | 0.468076 | 8.3:+65786651 | MS.gene046366:intron |
| TTTCTCCTCAACTAACAACT+TGG | 0.471374 | 8.3:-65788991 | None:intergenic |
| TGATCTCTGGAGCTGAGTTA+TGG | 0.471692 | 8.3:-65788881 | None:intergenic |
| GTTCCATCAAGTTGATTCAA+AGG | 0.473335 | 8.3:-65788032 | None:intergenic |
| TTCTGAATATGGTGCTTCTG+AGG | 0.477242 | 8.3:+65787920 | MS.gene046366:CDS |
| CCCTTGAACTCCGACTTGTT+CGG | 0.477568 | 8.3:+65789195 | MS.gene046366:CDS |
| GGATGCTGAGAATGTTCAAA+AGG | 0.482627 | 8.3:+65786334 | MS.gene046366:CDS |
| TTGCAAAGTCTAGGACTCAA+TGG | 0.484048 | 8.3:+65786401 | MS.gene046366:CDS |
| AGGGATCATGACAGGTTCAA+TGG | 0.486740 | 8.3:+65787845 | MS.gene046366:CDS |
| TGAAAAGTAGTCCACATAAG+AGG | 0.487540 | 8.3:-65787554 | None:intergenic |
| AGAGGTGACAGTAGAGTGAT+TGG | 0.487873 | 8.3:-65787536 | None:intergenic |
| AAGCAGAACTAAAATAGCTC+TGG | 0.487883 | 8.3:-65789346 | None:intergenic |
| GACATAGCAATTCTAATGGA+TGG | 0.489863 | 8.3:-65787708 | None:intergenic |
| GGAGATGCGGTAAAGGTCAC+GGG | 0.492799 | 8.3:+65788855 | MS.gene046366:CDS |
| GCTGCTGTAGATGAAGCTTA+AGG | 0.493940 | 8.3:-65787370 | None:intergenic |
| ACAAATGTGTTCAGAAATCC+AGG | 0.498059 | 8.3:+65787438 | MS.gene046366:CDS |
| TTCATCGCATGTCTGTATCC+TGG | 0.504627 | 8.3:-65787456 | None:intergenic |
| AGGACACTATGTTATCTTCT+GGG | 0.504762 | 8.3:+65789061 | MS.gene046366:CDS |
| TTTCTAGAACTAACATAGCC+AGG | 0.508065 | 8.3:-65789155 | None:intergenic |
| TTCAAATGTGAATCCTAAAG+AGG | 0.508857 | 8.3:+65787953 | MS.gene046366:CDS |
| AGGAGATGCGGTAAAGGTCA+CGG | 0.511505 | 8.3:+65788854 | MS.gene046366:CDS |
| CTTCAAGGCATGTGTTCCAT+TGG | 0.511917 | 8.3:+65786442 | MS.gene046366:CDS |
| CTCTACTGTCACCTCTTATG+TGG | 0.514303 | 8.3:+65787543 | MS.gene046366:CDS |
| GGTTTAACTGATGTGAAGAT+TGG | 0.514334 | 8.3:+65788077 | MS.gene046366:CDS |
| TCAATCCTATGCATTTCTTG+TGG | 0.525426 | 8.3:-65787770 | None:intergenic |
| TCTGAATATGGTGCTTCTGA+GGG | 0.529824 | 8.3:+65787921 | MS.gene046366:CDS |
| CTTGTTACTGATATCAAAGA+AGG | 0.530181 | 8.3:+65787660 | MS.gene046366:CDS |
| TCAAACAATTCAGCATTCCA+TGG | 0.540156 | 8.3:-65786690 | None:intergenic |
| TAGGCTAGGAGATGCGGTAA+AGG | 0.545407 | 8.3:+65788848 | MS.gene046366:CDS |
| CCGAACAAGTCGGAGTTCAA+GGG | 0.559483 | 8.3:-65789195 | None:intergenic |
| GCTGAATATTTGCAAAGTCT+AGG | 0.560377 | 8.3:+65786392 | MS.gene046366:CDS |
| CAATTGGTATGGATTGATAC+CGG | 0.565341 | 8.3:+65787794 | MS.gene046366:CDS |
| ATTGTTCTCACCAATCCTGC+AGG | 0.569627 | 8.3:+65788113 | MS.gene046366:CDS |
| AAATCTTTGTAAGTGACCAA+TGG | 0.572733 | 8.3:-65786458 | None:intergenic |
| ATCATCTGGACTGACACTAT+CGG | 0.577706 | 8.3:-65787490 | None:intergenic |
| GCAGCTCTGGTACTAGTCAA+GGG | 0.578389 | 8.3:+65786652 | MS.gene046366:intron |
| TAAGGTAGAGCTTGAGCCAG+TGG | 0.580352 | 8.3:+65788055 | MS.gene046366:CDS |
| TTCACATCAGTTAAACCCAC+TGG | 0.584475 | 8.3:-65788071 | None:intergenic |
| TTGATCCACAAGAAATGCAT+AGG | 0.591375 | 8.3:+65787765 | MS.gene046366:CDS |
| CAGAAGATAACATAGTGTCC+TGG | 0.592657 | 8.3:-65789059 | None:intergenic |
| CTAATGCTAAGTATGTTCTA+GGG | 0.593411 | 8.3:+65787826 | MS.gene046366:CDS |
| ATCGTCCAAGTTGTTAGTTG+AGG | 0.596707 | 8.3:+65788986 | MS.gene046366:CDS |
| AAGGTAGAGCTTGAGCCAGT+GGG | 0.598049 | 8.3:+65788056 | MS.gene046366:CDS |
| ACAACATAAGTAGCTAACTC+AGG | 0.606822 | 8.3:-65787978 | None:intergenic |
| TGTTGGATTAGGTGCATCCG+CGG | 0.607062 | 8.3:+65789250 | MS.gene046366:CDS |
| TATGTTCTAGGGATCATGAC+AGG | 0.608440 | 8.3:+65787837 | MS.gene046366:CDS |
| CAGATATAGGCTAGGAGATG+CGG | 0.610483 | 8.3:+65788842 | MS.gene046366:CDS |
| GTTAGTTCTAGAAAAGTCAA+AGG | 0.611504 | 8.3:+65789164 | MS.gene046366:CDS |
| TTAGCATTAGGGAAAAGCTC+CGG | 0.616345 | 8.3:-65787813 | None:intergenic |
| GGCTTATACAGATATAGGCT+AGG | 0.619603 | 8.3:+65788834 | MS.gene046366:intron |
| ATAGGATTGAGCAATTGGTA+TGG | 0.622644 | 8.3:+65787783 | MS.gene046366:CDS |
| TAGAAAAGTCAAAGGTATTG+CGG | 0.623191 | 8.3:+65789172 | MS.gene046366:CDS |
| GAACTCCGACTTGTTCGGAA+AGG | 0.630222 | 8.3:+65789200 | MS.gene046366:CDS |
| CAAATTATCACAAACAAAAG+GGG | 0.631674 | 8.3:+65787392 | MS.gene046366:CDS |
| CGGCTCAATTCAAGACACCT+AGG | 0.633848 | 8.3:+65789270 | MS.gene046366:CDS |
| ATTTCTGAACACATTTGTTG+TGG | 0.633999 | 8.3:-65787433 | None:intergenic |
| AGAATTTGAGAGTCTAACAA+AGG | 0.634885 | 8.3:+65786313 | MS.gene046366:CDS |
| GTTATCTTCTGGGAAATCAG+TGG | 0.640384 | 8.3:+65789071 | MS.gene046366:CDS |
| ATGTTCCTTTCCGAACAAGT+CGG | 0.642426 | 8.3:-65789205 | None:intergenic |
| GTTGAGACACTATGCAGGAG+AGG | 0.647395 | 8.3:+65787884 | MS.gene046366:CDS |
| ATTGATTTATCCAAAGAACC+AGG | 0.665402 | 8.3:+65789041 | MS.gene046366:CDS |
| AGGTGTCTTGAATTGAGCCG+CGG | 0.680345 | 8.3:-65789267 | None:intergenic |
| ATGTTCTGAAAGCATACACA+AGG | 0.681370 | 8.3:-65787617 | None:intergenic |
| AAATTATCACAAACAAAAGG+GGG | 0.682053 | 8.3:+65787393 | MS.gene046366:CDS |
| TTTGTAGGACCAATACACCT+AGG | 0.702315 | 8.3:-65789287 | None:intergenic |
| GGTTTGATATATCTTCACTG+TGG | 0.723029 | 8.3:-65786715 | None:intergenic |
| CCATATTCAGAAGTCAACAG+AGG | 0.745189 | 8.3:-65787909 | None:intergenic |
| GAGATGCGGTAAAGGTCACG+GGG | 0.752976 | 8.3:+65788856 | MS.gene046366:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAAAAACAAATGTTAA+GGG | + | chr8.3:65788516-65788535 | MS.gene046366:intron | 10.0% |
| !!! | TTAGTTTTTCAAATTATTAT+CGG | - | chr8.3:65787172-65787191 | None:intergenic | 10.0% |
| !!! | TTCATTTTTTAAATTACTAT+CGG | + | chr8.3:65786902-65786921 | MS.gene046366:intron | 10.0% |
| !! | AAAAATAAATTCATATAGCA+TGG | - | chr8.3:65787103-65787122 | None:intergenic | 15.0% |
| !! | AATAATTGAAAAATTTGACT+TGG | + | chr8.3:65786277-65786296 | MS.gene046366:CDS | 15.0% |
| !! | GTTATAAAAAACAAATGTTA+AGG | + | chr8.3:65788515-65788534 | MS.gene046366:intron | 15.0% |
| !! | TATAAAAAACAAATGTTAAG+GGG | + | chr8.3:65788517-65788536 | MS.gene046366:intron | 15.0% |
| !!! | TAGTTTTTCAAATTATTATC+GGG | - | chr8.3:65787171-65787190 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTTATAACCATTT+AGG | - | chr8.3:65788510-65788529 | None:intergenic | 15.0% |
| !! | ATGTTTGTGATAATTAATCT+TGG | + | chr8.3:65788801-65788820 | MS.gene046366:intron | 20.0% |
| !! | CAATACTATATTATGTTGTA+AGG | + | chr8.3:65788430-65788449 | MS.gene046366:intron | 20.0% |
| !! | CTTACAACATAATATAGTAT+TGG | - | chr8.3:65788432-65788451 | None:intergenic | 20.0% |
| !! | GTTACATATTTAATGTGATT+AGG | - | chr8.3:65788631-65788650 | None:intergenic | 20.0% |
| !! | TACTAATTGCATGTAAAAAT+GGG | - | chr8.3:65788712-65788731 | None:intergenic | 20.0% |
| !! | TATATCAATAGAATAGTTGA+TGG | + | chr8.3:65786488-65786507 | MS.gene046366:CDS | 20.0% |
| !! | TCAACTATTCTATTGATATA+AGG | - | chr8.3:65786488-65786507 | None:intergenic | 20.0% |
| !! | TTCATTTCTCAAATTATCAT+TGG | - | chr8.3:65787010-65787029 | None:intergenic | 20.0% |
| !!! | AGTTTTTCAAATTATTATCG+GGG | - | chr8.3:65787170-65787189 | None:intergenic | 20.0% |
| !!! | ATTACTGGTTAGTTTATATT+GGG | + | chr8.3:65788398-65788417 | MS.gene046366:intron | 20.0% |
| ! | AAAAATATCACCAGGTAAAA+TGG | - | chr8.3:65788759-65788778 | None:intergenic | 25.0% |
| ! | AAATCTGTAAAAATATCACC+AGG | - | chr8.3:65788767-65788786 | None:intergenic | 25.0% |
| ! | AAATTATCACAAACAAAAGG+GGG | + | chr8.3:65787393-65787412 | MS.gene046366:CDS | 25.0% |
| ! | AATTCAAAGTAAGCAATTTG+AGG | - | chr8.3:65788008-65788027 | None:intergenic | 25.0% |
| ! | AGCAAATTATCACAAACAAA+AGG | + | chr8.3:65787390-65787409 | MS.gene046366:CDS | 25.0% |
| ! | AGTAAAGAATGAATGATTAC+TGG | + | chr8.3:65788383-65788402 | MS.gene046366:intron | 25.0% |
| ! | CAAATTATCACAAACAAAAG+GGG | + | chr8.3:65787392-65787411 | MS.gene046366:CDS | 25.0% |
| ! | GCAAATTATCACAAACAAAA+GGG | + | chr8.3:65787391-65787410 | MS.gene046366:CDS | 25.0% |
| ! | GTACTAATTGCATGTAAAAA+TGG | - | chr8.3:65788713-65788732 | None:intergenic | 25.0% |
| ! | TACTATATTATGTTGTAAGG+TGG | + | chr8.3:65788433-65788452 | MS.gene046366:intron | 25.0% |
| ! | TGTCAAATATAGACATGTAT+TGG | - | chr8.3:65786843-65786862 | None:intergenic | 25.0% |
| !! | ATTAATCTTGGATAATTTGC+AGG | + | chr8.3:65788813-65788832 | MS.gene046366:intron | 25.0% |
| !! | TTTTACACATTCAAATGAGA+AGG | - | chr8.3:65786593-65786612 | None:intergenic | 25.0% |
| !! | TTTTGACATAGCAATTCTAA+TGG | - | chr8.3:65787715-65787734 | None:intergenic | 25.0% |
| !!! | CAATTTAGTCCTTGTTATTA+AGG | + | chr8.3:65788278-65788297 | MS.gene046366:intron | 25.0% |
| !!! | GATTACTGGTTAGTTTATAT+TGG | + | chr8.3:65788397-65788416 | MS.gene046366:intron | 25.0% |
| !!! | TGAAAAATTTGACTTGGAAA+AGG | + | chr8.3:65786283-65786302 | MS.gene046366:CDS | 25.0% |
| AAAAAATTTACAGTACCTGC+AGG | - | chr8.3:65788131-65788150 | None:intergenic | 30.0% | |
| AAATCTTTGTAAGTGACCAA+TGG | - | chr8.3:65786461-65786480 | None:intergenic | 30.0% | |
| AAGATTCTTGAGCATTATGT+TGG | + | chr8.3:65789233-65789252 | MS.gene046366:CDS | 30.0% | |
| ACTTCAATTATGTGCTACAT+AGG | - | chr8.3:65786808-65786827 | None:intergenic | 30.0% | |
| AGAATTTGAGAGTCTAACAA+AGG | + | chr8.3:65786313-65786332 | MS.gene046366:CDS | 30.0% | |
| AGAGAGTTTCCTATCAAAAA+TGG | + | chr8.3:65787342-65787361 | MS.gene046366:intron | 30.0% | |
| AGTACTATGTTCCTTATGTA+GGG | - | chr8.3:65788607-65788626 | None:intergenic | 30.0% | |
| ATAATTGTGGAGGATTTGAT+TGG | + | chr8.3:65788456-65788475 | MS.gene046366:intron | 30.0% | |
| ATAGGAAACTCTCTACATAA+TGG | - | chr8.3:65787336-65787355 | None:intergenic | 30.0% | |
| ATTCCTTTGAATCAACTTGA+TGG | + | chr8.3:65788029-65788048 | MS.gene046366:CDS | 30.0% | |
| ATTGGTCACTTACAAAGATT+TGG | + | chr8.3:65786460-65786479 | MS.gene046366:CDS | 30.0% | |
| CAACAATATTTGCAACACTT+TGG | - | chr8.3:65789315-65789334 | None:intergenic | 30.0% | |
| CAATCACTGATATTTCCTTA+AGG | + | chr8.3:65786540-65786559 | MS.gene046366:CDS | 30.0% | |
| CAGAACATTTGAACAAGTTT+GGG | + | chr8.3:65787632-65787651 | MS.gene046366:CDS | 30.0% | |
| CGTATCATCAAGCATATAAA+AGG | - | chr8.3:65788551-65788570 | None:intergenic | 30.0% | |
| CTAATGCTAAGTATGTTCTA+GGG | + | chr8.3:65787826-65787845 | MS.gene046366:CDS | 30.0% | |
| CTAGAACATACTTAGCATTA+GGG | - | chr8.3:65787827-65787846 | None:intergenic | 30.0% | |
| CTTAAGGAAATATCAGTGAT+TGG | - | chr8.3:65786542-65786561 | None:intergenic | 30.0% | |
| CTTCAGATTAAAGATGTGTT+TGG | - | chr8.3:65787077-65787096 | None:intergenic | 30.0% | |
| CTTGTTACTGATATCAAAGA+AGG | + | chr8.3:65787660-65787679 | MS.gene046366:CDS | 30.0% | |
| GGAAGCAAAAATATATACCA+TGG | + | chr8.3:65786673-65786692 | MS.gene046366:CDS | 30.0% | |
| GGATACAAATCACCTAAATT+TGG | - | chr8.3:65788586-65788605 | None:intergenic | 30.0% | |
| GTGTAAAAGTTAGAAGTTTC+TGG | + | chr8.3:65786605-65786624 | MS.gene046366:intron | 30.0% | |
| TAGTACTATGTTCCTTATGT+AGG | - | chr8.3:65788608-65788627 | None:intergenic | 30.0% | |
| TCAGAACATTTGAACAAGTT+TGG | + | chr8.3:65787631-65787650 | MS.gene046366:CDS | 30.0% | |
| TCCATAACACCTTAATAACA+AGG | - | chr8.3:65788290-65788309 | None:intergenic | 30.0% | |
| TGAAGAGACTAATACTCTAA+AGG | - | chr8.3:65788201-65788220 | None:intergenic | 30.0% | |
| TTACATGCAATTAGTACTAG+TGG | + | chr8.3:65788716-65788735 | MS.gene046366:intron | 30.0% | |
| TTCAAATGTGAATCCTAAAG+AGG | + | chr8.3:65787953-65787972 | MS.gene046366:CDS | 30.0% | |
| ! | ATCAAACCTCTTTTGTCTTT+AGG | + | chr8.3:65786730-65786749 | MS.gene046366:CDS | 30.0% |
| ! | ATTGATTTATCCAAAGAACC+AGG | + | chr8.3:65789041-65789060 | MS.gene046366:CDS | 30.0% |
| ! | ATTTCTGAACACATTTGTTG+TGG | - | chr8.3:65787436-65787455 | None:intergenic | 30.0% |
| ! | GGAAACACTGAAAAAGATTT+TGG | + | chr8.3:65786355-65786374 | MS.gene046366:CDS | 30.0% |
| ! | TATGCTTATTCCATTTTACC+TGG | + | chr8.3:65788746-65788765 | MS.gene046366:intron | 30.0% |
| !! | CAAAGTGTTGCAAATATTGT+TGG | + | chr8.3:65789313-65789332 | MS.gene046366:CDS | 30.0% |
| !! | GTTAGTTCTAGAAAAGTCAA+AGG | + | chr8.3:65789164-65789183 | MS.gene046366:CDS | 30.0% |
| !! | TAGAAAAGTCAAAGGTATTG+CGG | + | chr8.3:65789172-65789191 | MS.gene046366:CDS | 30.0% |
| !! | TCCTTGTTATTAAGGTGTTA+TGG | + | chr8.3:65788286-65788305 | MS.gene046366:intron | 30.0% |
| AAAAAGTTGAGACACTATGC+AGG | + | chr8.3:65787879-65787898 | MS.gene046366:CDS | 35.0% | |
| AAGCAGAACTAAAATAGCTC+TGG | - | chr8.3:65789349-65789368 | None:intergenic | 35.0% | |
| AAGTTAGCTAGTTCAGGATT+TGG | - | chr8.3:65787747-65787766 | None:intergenic | 35.0% | |
| AATGCATAGGATTGAGCAAT+TGG | + | chr8.3:65787778-65787797 | MS.gene046366:CDS | 35.0% | |
| ACAAATGTGTTCAGAAATCC+AGG | + | chr8.3:65787438-65787457 | MS.gene046366:CDS | 35.0% | |
| ACAACATAAGTAGCTAACTC+AGG | - | chr8.3:65787981-65788000 | None:intergenic | 35.0% | |
| AGGACACTATGTTATCTTCT+GGG | + | chr8.3:65789061-65789080 | MS.gene046366:CDS | 35.0% | |
| ATAGGATTGAGCAATTGGTA+TGG | + | chr8.3:65787783-65787802 | MS.gene046366:CDS | 35.0% | |
| CAGACATTTCTTCAATGTGT+CGG | + | chr8.3:65787258-65787277 | MS.gene046366:intron | 35.0% | |
| CATAATGCTCAAGAATCTTC+TGG | - | chr8.3:65789232-65789251 | None:intergenic | 35.0% | |
| CCTAATGCTAAGTATGTTCT+AGG | + | chr8.3:65787825-65787844 | MS.gene046366:CDS | 35.0% | |
| CCTAGAACATACTTAGCATT+AGG | - | chr8.3:65787828-65787847 | None:intergenic | 35.0% | |
| CGACGTATCAGTATCATATT+CGG | - | chr8.3:65787146-65787165 | None:intergenic | 35.0% | |
| CTTGAGCATTATGTTGGATT+AGG | + | chr8.3:65789239-65789258 | MS.gene046366:CDS | 35.0% | |
| CTTGTTCCTAAAGACAAAAG+AGG | - | chr8.3:65786739-65786758 | None:intergenic | 35.0% | |
| GAATCAACTTGATGGAACTA+AGG | + | chr8.3:65788037-65788056 | MS.gene046366:CDS | 35.0% | |
| GACATAGCAATTCTAATGGA+TGG | - | chr8.3:65787711-65787730 | None:intergenic | 35.0% | |
| GCTGAATATTTGCAAAGTCT+AGG | + | chr8.3:65786392-65786411 | MS.gene046366:CDS | 35.0% | |
| GGACTGAATATTACATCATC+TGG | - | chr8.3:65787507-65787526 | None:intergenic | 35.0% | |
| GGTTTAACTGATGTGAAGAT+TGG | + | chr8.3:65788077-65788096 | MS.gene046366:CDS | 35.0% | |
| GGTTTGATATATCTTCACTG+TGG | - | chr8.3:65786718-65786737 | None:intergenic | 35.0% | |
| GTTGTTAGTTGAGGAGAAAA+TGG | + | chr8.3:65788995-65789014 | MS.gene046366:CDS | 35.0% | |
| GTTTCCTATCAAAAATGGCA+AGG | + | chr8.3:65787347-65787366 | MS.gene046366:CDS | 35.0% | |
| TAGAGTGATTGGTGAAAATC+TGG | - | chr8.3:65787528-65787547 | None:intergenic | 35.0% | |
| TATTTCCTGCCTATGAAGTA+CGG | + | chr8.3:65786962-65786981 | MS.gene046366:intron | 35.0% | |
| TCAAACAATTCAGCATTCCA+TGG | - | chr8.3:65786693-65786712 | None:intergenic | 35.0% | |
| TCAATCCTATGCATTTCTTG+TGG | - | chr8.3:65787773-65787792 | None:intergenic | 35.0% | |
| TGAAAAGTAGTCCACATAAG+AGG | - | chr8.3:65787557-65787576 | None:intergenic | 35.0% | |
| TGATACGATGTTGACATATG+TGG | + | chr8.3:65786864-65786883 | MS.gene046366:intron | 35.0% | |
| TGATGAATGTTGCACATGTT+TGG | + | chr8.3:65789115-65789134 | MS.gene046366:CDS | 35.0% | |
| TGTCTCATAGTCATACCTTA+AGG | - | chr8.3:65786558-65786577 | None:intergenic | 35.0% | |
| TGTTGTAAGGTGGATAATTG+TGG | + | chr8.3:65788443-65788462 | MS.gene046366:intron | 35.0% | |
| TTGATCCACAAGAAATGCAT+AGG | + | chr8.3:65787765-65787784 | MS.gene046366:CDS | 35.0% | |
| TTGCAGGCTTATACAGATAT+AGG | + | chr8.3:65788829-65788848 | MS.gene046366:intron | 35.0% | |
| TTTCTCCTCAACTAACAACT+TGG | - | chr8.3:65788994-65789013 | None:intergenic | 35.0% | |
| TTTCTGCTAGTTAGCTAGAA+TGG | + | chr8.3:65787292-65787311 | MS.gene046366:intron | 35.0% | |
| ! | CAATGTTGATTGTGAGCATA+AGG | - | chr8.3:65788926-65788945 | None:intergenic | 35.0% |
| ! | CAATTGGTATGGATTGATAC+CGG | + | chr8.3:65787794-65787813 | MS.gene046366:CDS | 35.0% |
| ! | GACAAAGCTTTTAGCCTAAA+TGG | + | chr8.3:65788493-65788512 | MS.gene046366:intron | 35.0% |
| ! | GACAAGTCTTTTATTGATCC+TGG | + | chr8.3:65789137-65789156 | MS.gene046366:CDS | 35.0% |
| ! | GATTTTTCTCCTATTCTCAC+TGG | + | chr8.3:65786512-65786531 | MS.gene046366:CDS | 35.0% |
| ! | GTGATTTGTATCCCTACATA+AGG | + | chr8.3:65788593-65788612 | MS.gene046366:intron | 35.0% |
| ! | TACTCTAAAGGCTGAATTGA+AGG | - | chr8.3:65788189-65788208 | None:intergenic | 35.0% |
| !! | ATGTTCTGAAAGCATACACA+AGG | - | chr8.3:65787620-65787639 | None:intergenic | 35.0% |
| !! | GTTCCATCAAGTTGATTCAA+AGG | - | chr8.3:65788035-65788054 | None:intergenic | 35.0% |
| !! | TTTCTAGAACTAACATAGCC+AGG | - | chr8.3:65789158-65789177 | None:intergenic | 35.0% |
| !!! | ATTGGTTTTCCAGTGAGAAT+AGG | - | chr8.3:65786524-65786543 | None:intergenic | 35.0% |
| AACTGATCCTGAAAGCTTCA+AGG | + | chr8.3:65786427-65786446 | MS.gene046366:CDS | 40.0% | |
| ACCAACATGGGACCAAATTT+AGG | + | chr8.3:65788571-65788590 | MS.gene046366:intron | 40.0% | |
| ACCTAAATTTGGTCCCATGT+TGG | - | chr8.3:65788575-65788594 | None:intergenic | 40.0% | |
| ACTGACATGGTGTGATTTGA+AGG | - | chr8.3:65788681-65788700 | None:intergenic | 40.0% | |
| ATCATCTGGACTGACACTAT+CGG | - | chr8.3:65787493-65787512 | None:intergenic | 40.0% | |
| ATCGTCCAAGTTGTTAGTTG+AGG | + | chr8.3:65788986-65789005 | MS.gene046366:CDS | 40.0% | |
| ATGTTCCTTTCCGAACAAGT+CGG | - | chr8.3:65789208-65789227 | None:intergenic | 40.0% | |
| ATTTACAGTACCTGCAGGAT+TGG | - | chr8.3:65788126-65788145 | None:intergenic | 40.0% | |
| CAGAAGATAACATAGTGTCC+TGG | - | chr8.3:65789062-65789081 | None:intergenic | 40.0% | |
| CAGGACACTATGTTATCTTC+TGG | + | chr8.3:65789060-65789079 | MS.gene046366:CDS | 40.0% | |
| CCATATTCAGAAGTCAACAG+AGG | - | chr8.3:65787912-65787931 | None:intergenic | 40.0% | |
| CTGCAAAGAAACTTGATCTC+TGG | - | chr8.3:65788897-65788916 | None:intergenic | 40.0% | |
| GGATGCTGAGAATGTTCAAA+AGG | + | chr8.3:65786334-65786353 | MS.gene046366:CDS | 40.0% | |
| GGCTTATACAGATATAGGCT+AGG | + | chr8.3:65788834-65788853 | MS.gene046366:intron | 40.0% | |
| TACTATCGGTGTATACATGC+CGG | + | chr8.3:65786916-65786935 | MS.gene046366:intron | 40.0% | |
| TCTGAATATGGTGCTTCTGA+GGG | + | chr8.3:65787921-65787940 | MS.gene046366:CDS | 40.0% | |
| TGGATCAAGTTAGCTAGTTC+AGG | - | chr8.3:65787753-65787772 | None:intergenic | 40.0% | |
| TGTAAGGTGGATAATTGTGG+AGG | + | chr8.3:65788446-65788465 | MS.gene046366:intron | 40.0% | |
| TGTCTGACACCAATACACAT+GGG | + | chr8.3:65787231-65787250 | MS.gene046366:intron | 40.0% | |
| TTAGCATTAGGGAAAAGCTC+CGG | - | chr8.3:65787816-65787835 | None:intergenic | 40.0% | |
| TTCAAGACACCTAGGTGTAT+TGG | + | chr8.3:65789278-65789297 | MS.gene046366:CDS | 40.0% | |
| TTCACATCAGTTAAACCCAC+TGG | - | chr8.3:65788074-65788093 | None:intergenic | 40.0% | |
| TTCTGAATATGGTGCTTCTG+AGG | + | chr8.3:65787920-65787939 | MS.gene046366:CDS | 40.0% | |
| TTGTCTGACACCAATACACA+TGG | + | chr8.3:65787230-65787249 | MS.gene046366:intron | 40.0% | |
| TTTGTAGGACCAATACACCT+AGG | - | chr8.3:65789290-65789309 | None:intergenic | 40.0% | |
| ! | AACATAGTGTCCTGGTTCTT+TGG | - | chr8.3:65789054-65789073 | None:intergenic | 40.0% |
| ! | CTTGATGATACGACCAACAT+GGG | + | chr8.3:65788559-65788578 | MS.gene046366:intron | 40.0% |
| ! | GTCTGTTTTCCCATGTGTAT+TGG | - | chr8.3:65787243-65787262 | None:intergenic | 40.0% |
| ! | GTTATCTTCTGGGAAATCAG+TGG | + | chr8.3:65789071-65789090 | MS.gene046366:CDS | 40.0% |
| ! | TTGCAAAGTCTAGGACTCAA+TGG | + | chr8.3:65786401-65786420 | MS.gene046366:CDS | 40.0% |
| !! | CCTCTGTTGACTTCTGAATA+TGG | + | chr8.3:65787909-65787928 | MS.gene046366:CDS | 40.0% |
| !! | TATGTTCTAGGGATCATGAC+AGG | + | chr8.3:65787837-65787856 | MS.gene046366:CDS | 40.0% |
| !! | TGCAACACTTTGGTGTTTGT+AGG | - | chr8.3:65789305-65789324 | None:intergenic | 40.0% |
| !!! | AAGGCCTTGCCATTTTTGAT+AGG | - | chr8.3:65787354-65787373 | None:intergenic | 40.0% |
| ACACATGCCTTGAAGCTTTC+AGG | - | chr8.3:65786437-65786456 | None:intergenic | 45.0% | |
| AGAGGTGACAGTAGAGTGAT+TGG | - | chr8.3:65787539-65787558 | None:intergenic | 45.0% | |
| AGGGATCATGACAGGTTCAA+TGG | + | chr8.3:65787845-65787864 | MS.gene046366:CDS | 45.0% | |
| ATACATGCCGGCGTCTATTT+AGG | + | chr8.3:65786928-65786947 | MS.gene046366:intron | 45.0% | |
| ATGGGATAGTGACACTGACA+TGG | - | chr8.3:65788694-65788713 | None:intergenic | 45.0% | |
| ATTGTTCTCACCAATCCTGC+AGG | + | chr8.3:65788113-65788132 | MS.gene046366:CDS | 45.0% | |
| CAAGTATGCAACGTCGTTGT+TGG | + | chr8.3:65787048-65787067 | MS.gene046366:intron | 45.0% | |
| CAGATATAGGCTAGGAGATG+CGG | + | chr8.3:65788842-65788861 | MS.gene046366:CDS | 45.0% | |
| CTCTACTGTCACCTCTTATG+TGG | + | chr8.3:65787543-65787562 | MS.gene046366:CDS | 45.0% | |
| CTGCCTATGAAGTACGGATA+CGG | + | chr8.3:65786968-65786987 | MS.gene046366:intron | 45.0% | |
| CTTCAAGGCATGTGTTCCAT+TGG | + | chr8.3:65786442-65786461 | MS.gene046366:CDS | 45.0% | |
| GCTGCTGTAGATGAAGCTTA+AGG | - | chr8.3:65787373-65787392 | None:intergenic | 45.0% | |
| TTCATCGCATGTCTGTATCC+TGG | - | chr8.3:65787459-65787478 | None:intergenic | 45.0% | |
| ! | AATATGGTGCTTCTGAGGGT+TGG | + | chr8.3:65787925-65787944 | MS.gene046366:CDS | 45.0% |
| ! | GCTTGATGATACGACCAACA+TGG | + | chr8.3:65788558-65788577 | MS.gene046366:intron | 45.0% |
| !! | GTGTTGTGTTTTTGCAGCTC+TGG | + | chr8.3:65786639-65786658 | MS.gene046366:intron | 45.0% |
| !! | TGATCTCTGGAGCTGAGTTA+TGG | - | chr8.3:65788884-65788903 | None:intergenic | 45.0% |
| AAGGTAGAGCTTGAGCCAGT+GGG | + | chr8.3:65788056-65788075 | MS.gene046366:CDS | 50.0% | |
| AGGAGATGCGGTAAAGGTCA+CGG | + | chr8.3:65788854-65788873 | MS.gene046366:CDS | 50.0% | |
| AGGTGTCTTGAATTGAGCCG+CGG | - | chr8.3:65789270-65789289 | None:intergenic | 50.0% | |
| CCGAACAAGTCGGAGTTCAA+GGG | - | chr8.3:65789198-65789217 | None:intergenic | 50.0% | |
| CGGCTCAATTCAAGACACCT+AGG | + | chr8.3:65789270-65789289 | MS.gene046366:CDS | 50.0% | |
| CGTATCCGTACTTCATAGGC+AGG | - | chr8.3:65786970-65786989 | None:intergenic | 50.0% | |
| GCTAACTCAGGAGCCTCTTT+AGG | - | chr8.3:65787969-65787988 | None:intergenic | 50.0% | |
| GTGCCGTATCCGTACTTCAT+AGG | - | chr8.3:65786974-65786993 | None:intergenic | 50.0% | |
| GTTGAGACACTATGCAGGAG+AGG | + | chr8.3:65787884-65787903 | MS.gene046366:CDS | 50.0% | |
| TAAGGTAGAGCTTGAGCCAG+TGG | + | chr8.3:65788055-65788074 | MS.gene046366:CDS | 50.0% | |
| TAGGCTAGGAGATGCGGTAA+AGG | + | chr8.3:65788848-65788867 | MS.gene046366:CDS | 50.0% | |
| TCCGAACAAGTCGGAGTTCA+AGG | - | chr8.3:65789199-65789218 | None:intergenic | 50.0% | |
| ! | CCCTTGAACTCCGACTTGTT+CGG | + | chr8.3:65789195-65789214 | MS.gene046366:CDS | 50.0% |
| ! | CGAAGCACCTAAATAGACGC+CGG | - | chr8.3:65786938-65786957 | None:intergenic | 50.0% |
| ! | GAACTCCGACTTGTTCGGAA+AGG | + | chr8.3:65789200-65789219 | MS.gene046366:CDS | 50.0% |
| ! | GCAGCTCTGGTACTAGTCAA+GGG | + | chr8.3:65786652-65786671 | MS.gene046366:intron | 50.0% |
| ! | TGCAGCTCTGGTACTAGTCA+AGG | + | chr8.3:65786651-65786670 | MS.gene046366:intron | 50.0% |
| ! | TGTTGGATTAGGTGCATCCG+CGG | + | chr8.3:65789250-65789269 | MS.gene046366:CDS | 50.0% |
| GAGATGCGGTAAAGGTCACG+GGG | + | chr8.3:65788856-65788875 | MS.gene046366:CDS | 55.0% | |
| GGAGATGCGGTAAAGGTCAC+GGG | + | chr8.3:65788855-65788874 | MS.gene046366:CDS | 55.0% | |
| ! | ACAAAAGGGGGTGTGACAGC+AGG | + | chr8.3:65787405-65787424 | MS.gene046366:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 65786269 | 65789376 | 65786269 | ID=MS.gene046366 |
| chr8.3 | mRNA | 65786269 | 65789376 | 65786269 | ID=MS.gene046366.t1;Parent=MS.gene046366 |
| chr8.3 | exon | 65786269 | 65786561 | 65786269 | ID=MS.gene046366.t1.exon1;Parent=MS.gene046366.t1 |
| chr8.3 | CDS | 65786269 | 65786561 | 65786269 | ID=cds.MS.gene046366.t1;Parent=MS.gene046366.t1 |
| chr8.3 | exon | 65786656 | 65786757 | 65786656 | ID=MS.gene046366.t1.exon2;Parent=MS.gene046366.t1 |
| chr8.3 | CDS | 65786656 | 65786757 | 65786656 | ID=cds.MS.gene046366.t1;Parent=MS.gene046366.t1 |
| chr8.3 | exon | 65787344 | 65788134 | 65787344 | ID=MS.gene046366.t1.exon3;Parent=MS.gene046366.t1 |
| chr8.3 | CDS | 65787344 | 65788134 | 65787344 | ID=cds.MS.gene046366.t1;Parent=MS.gene046366.t1 |
| chr8.3 | exon | 65788835 | 65789376 | 65788835 | ID=MS.gene046366.t1.exon4;Parent=MS.gene046366.t1 |
| chr8.3 | CDS | 65788835 | 65789376 | 65788835 | ID=cds.MS.gene046366.t1;Parent=MS.gene046366.t1 |
| Gene Sequence |
| Protein sequence |
