Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04645.t1 | XP_003625292.1 | 98.2 | 841 | 15 | 0 | 1 | 841 | 1 | 841 | 0.00E+00 | 1620.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04645.t1 | Q9FG37 | 70.0 | 848 | 232 | 6 | 3 | 841 | 2 | 836 | 0.0e+00 | 1157.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04645.t1 | G7KWA0 | 98.2 | 841 | 15 | 0 | 1 | 841 | 1 | 841 | 0.0e+00 | 1620.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024821 | MS.gene04645 | PPI |
| MS.gene79799 | MS.gene04645 | PPI |
| MS.gene04645 | MS.gene24697 | PPI |
| MS.gene04645 | MS.gene55626 | PPI |
| MS.gene04645 | MS.gene82109 | PPI |
| MS.gene04645 | MS.gene050299 | PPI |
| MS.gene04645 | MS.gene037044 | PPI |
| MS.gene04645 | MS.gene47284 | PPI |
| MS.gene04645 | MS.gene21793 | PPI |
| MS.gene058069 | MS.gene04645 | PPI |
| MS.gene04645 | MS.gene042871 | PPI |
| MS.gene04645 | MS.gene066960 | PPI |
| MS.gene87898 | MS.gene04645 | PPI |
| MS.gene04645 | MS.gene007196 | PPI |
| MS.gene04645 | MS.gene40494 | PPI |
| MS.gene04645 | MS.gene49838 | PPI |
| MS.gene07741 | MS.gene04645 | PPI |
| MS.gene04645 | MS.gene55120 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04645.t1 | MTR_7g093560 | 98.216 | 841 | 15 | 0 | 1 | 841 | 1 | 841 | 0.0 | 1710 |
| MS.gene04645.t1 | MTR_8g011450 | 26.842 | 570 | 321 | 21 | 181 | 700 | 20 | 543 | 1.73e-42 | 165 |
| MS.gene04645.t1 | MTR_1g088410 | 22.500 | 480 | 267 | 10 | 331 | 708 | 160 | 636 | 1.48e-24 | 110 |
| MS.gene04645.t1 | MTR_5g004880 | 26.493 | 268 | 176 | 7 | 477 | 731 | 851 | 1110 | 9.08e-17 | 85.9 |
| MS.gene04645.t1 | MTR_5g004880 | 26.394 | 269 | 176 | 8 | 477 | 731 | 851 | 1111 | 9.56e-17 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04645.t1 | AT5G06680 | 70.165 | 848 | 231 | 6 | 3 | 841 | 2 | 836 | 0.0 | 1212 |
| MS.gene04645.t1 | AT5G17410 | 26.224 | 572 | 335 | 22 | 178 | 708 | 59 | 584 | 2.20e-34 | 140 |
| MS.gene04645.t1 | AT5G17410 | 26.224 | 572 | 335 | 22 | 178 | 708 | 60 | 585 | 2.58e-34 | 140 |
| MS.gene04645.t1 | AT3G53760 | 23.124 | 493 | 282 | 13 | 331 | 729 | 176 | 665 | 4.46e-24 | 108 |
| MS.gene04645.t1 | AT3G53760 | 23.124 | 493 | 282 | 13 | 331 | 729 | 176 | 665 | 5.03e-24 | 108 |
| MS.gene04645.t1 | AT3G43610 | 25.623 | 281 | 176 | 8 | 477 | 731 | 850 | 1123 | 4.05e-15 | 80.5 |
| MS.gene04645.t1 | AT3G43610 | 25.623 | 281 | 176 | 8 | 477 | 731 | 813 | 1086 | 4.51e-15 | 80.5 |
| MS.gene04645.t1 | AT3G53760 | 28.221 | 163 | 112 | 3 | 570 | 729 | 477 | 637 | 8.72e-15 | 79.0 |
| MS.gene04645.t1 | AT3G43610 | 25.532 | 282 | 176 | 9 | 477 | 731 | 850 | 1124 | 3.03e-14 | 77.8 |
Find 198 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGGGGAGTTAGGGTTTA+TGG | 0.083486 | 7.3:-17160184 | None:intergenic |
| GGTTTATGGGTTGGGAATTT+GGG | 0.124644 | 7.3:-17160170 | None:intergenic |
| ATTCTCCGAAATCGTTAAAT+TGG | 0.126045 | 7.3:-17160481 | None:intergenic |
| GTATGATGACCCTGATATTT+TGG | 0.145189 | 7.3:+17161730 | MS.gene04645:CDS |
| GGGTTTATGGGTTGGGAATT+TGG | 0.145704 | 7.3:-17160171 | None:intergenic |
| GTTTATAAGCTTTGTGAATT+AGG | 0.158306 | 7.3:+17160768 | MS.gene04645:CDS |
| TGAGGCGCTGCCAAGTTCTT+TGG | 0.213912 | 7.3:+17162023 | MS.gene04645:CDS |
| TGGATTCAATTAGGGTTTCT+AGG | 0.220908 | 7.3:+17160730 | MS.gene04645:CDS |
| GCAAACACGGAGAAAATTTA+TGG | 0.243617 | 7.3:-17161372 | None:intergenic |
| AGCATGTTGCAATCTATTAA+AGG | 0.251716 | 7.3:-17161975 | None:intergenic |
| TTTATAAGCTTTGTGAATTA+GGG | 0.258383 | 7.3:+17160769 | MS.gene04645:CDS |
| GAGCGTAACGGAGGGAGTTT+TGG | 0.267332 | 7.3:-17160209 | None:intergenic |
| TCTTCCCAATTTAACGATTT+CGG | 0.269334 | 7.3:+17160476 | MS.gene04645:CDS |
| AGTGGCTTTGGTGGAGAATT+TGG | 0.269782 | 7.3:-17160361 | None:intergenic |
| TCGGCGACGGCGGCGGAGTC+GGG | 0.277688 | 7.3:-17160270 | None:intergenic |
| TGAGGGGAGTTAGGGTTTAT+GGG | 0.283183 | 7.3:-17160183 | None:intergenic |
| CTGAGCCTATCCAAAATATC+AGG | 0.289118 | 7.3:-17161740 | None:intergenic |
| ATAAGCTCTTTCAAACTTGC+AGG | 0.292246 | 7.3:+17161671 | MS.gene04645:CDS |
| TTATATAATGTTTGAAGTCT+TGG | 0.292447 | 7.3:+17162081 | MS.gene04645:CDS |
| ATGGCAAGACGCGGTGGTTT+TGG | 0.294822 | 7.3:+17161443 | MS.gene04645:CDS |
| GTATTAGAAGTTATGCAATT+TGG | 0.298927 | 7.3:-17161953 | None:intergenic |
| CTGTCTGAGGGTGTGAGTTC+GGG | 0.300602 | 7.3:+17160963 | MS.gene04645:CDS |
| TTTCAAACTTGCAGGTTTGC+TGG | 0.301868 | 7.3:+17161679 | MS.gene04645:CDS |
| AGTTATGCAATTTGGTTTCA+TGG | 0.305186 | 7.3:-17161945 | None:intergenic |
| ATTTGGTTTCATGGTCTTCC+AGG | 0.315576 | 7.3:-17161936 | None:intergenic |
| TTCTAGGGCTAGTAGTAGTA+TGG | 0.316780 | 7.3:+17160746 | MS.gene04645:CDS |
| AATGGTGAAGAGGTGGGTTT+TGG | 0.332311 | 7.3:+17161193 | MS.gene04645:CDS |
| CGGCGACGGCGGCGGAGTCG+GGG | 0.337631 | 7.3:-17160269 | None:intergenic |
| TGGGTTTATTGAGATGAGTT+TGG | 0.343645 | 7.3:+17160812 | MS.gene04645:CDS |
| AACTGATACCCTTGAGTCAT+TGG | 0.348158 | 7.3:+17161475 | MS.gene04645:CDS |
| TTTAAGAGGTGGGGCGATGG+CGG | 0.348905 | 7.3:+17161079 | MS.gene04645:CDS |
| ATCGGCGACGGCGGCGGAGT+CGG | 0.351723 | 7.3:-17160271 | None:intergenic |
| CGACGACGCGGTGAAAATAA+TGG | 0.354169 | 7.3:+17160510 | MS.gene04645:CDS |
| GTTTATGGGTTGGGAATTTG+GGG | 0.365980 | 7.3:-17160169 | None:intergenic |
| GAGGCGCTGCCAAGTTCTTT+GGG | 0.368485 | 7.3:+17162024 | MS.gene04645:CDS |
| AAAGAGCTTATTGTGTTTGC+GGG | 0.370957 | 7.3:-17161659 | None:intergenic |
| TATTGTTTAAGAGGGTTGTT+GGG | 0.372072 | 7.3:+17160793 | MS.gene04645:CDS |
| GATGAGGTTGATGGCAGATT+TGG | 0.372904 | 7.3:+17161040 | MS.gene04645:CDS |
| GGAGTTAGGGTTTATGGGTT+GGG | 0.375325 | 7.3:-17160178 | None:intergenic |
| GAGAGAGGAGGTGGTGGACT+AGG | 0.375344 | 7.3:-17160137 | None:intergenic |
| AAGAATTGATAAGCATCTAT+TGG | 0.375584 | 7.3:+17161514 | MS.gene04645:CDS |
| CGTTGAGGAGATTAGCGGTT+TGG | 0.375829 | 7.3:+17160997 | MS.gene04645:CDS |
| AATTAGGGGTATTGTTTAAG+AGG | 0.376828 | 7.3:+17160784 | MS.gene04645:CDS |
| ATTATCGATATGAGTGGCTT+TGG | 0.379589 | 7.3:-17160373 | None:intergenic |
| AGATCTGGATGCAATATCTA+AGG | 0.386160 | 7.3:+17162563 | MS.gene04645:CDS |
| GGGTTTATTGAGATGAGTTT+GGG | 0.393560 | 7.3:+17160813 | MS.gene04645:CDS |
| GCTGTCTGAGGGTGTGAGTT+CGG | 0.398690 | 7.3:+17160962 | MS.gene04645:CDS |
| TACTATTAGTGACTTGTAAA+GGG | 0.399617 | 7.3:-17162230 | None:intergenic |
| AGAGTGGAACATGCACTTAT+TGG | 0.400373 | 7.3:+17161911 | MS.gene04645:CDS |
| CGCTTTGGAGAGAGGGATAT+AGG | 0.401266 | 7.3:+17161279 | MS.gene04645:CDS |
| GTTTGCTGGAAACAGCAATT+CGG | 0.402370 | 7.3:+17161693 | MS.gene04645:CDS |
| TTTGCTGGAAACAGCAATTC+GGG | 0.411585 | 7.3:+17161694 | MS.gene04645:CDS |
| TTCTCCGAAATCGTTAAATT+GGG | 0.417131 | 7.3:-17160480 | None:intergenic |
| GTAGAGGATGTTGGGACGGT+TGG | 0.418070 | 7.3:+17160846 | MS.gene04645:CDS |
| TAGAGGATGTTGGGACGGTT+GGG | 0.424317 | 7.3:+17160847 | MS.gene04645:CDS |
| TTTGGAATTGAGGGGAGTTA+GGG | 0.426525 | 7.3:-17160191 | None:intergenic |
| GTATTGTTTAAGAGGGTTGT+TGG | 0.427342 | 7.3:+17160792 | MS.gene04645:CDS |
| GTCAGCGAAGGAGAGGGCTT+CGG | 0.432734 | 7.3:-17160331 | None:intergenic |
| TTAAGAGGTGGGGCGATGGC+GGG | 0.433851 | 7.3:+17161080 | MS.gene04645:CDS |
| GCGATTTCTCGTCTATTCTT+CGG | 0.434378 | 7.3:-17160567 | None:intergenic |
| TTACTATTAGTGACTTGTAA+AGG | 0.435584 | 7.3:-17162231 | None:intergenic |
| CGTGCTGCGACTGAAGATAC+AGG | 0.437000 | 7.3:+17161416 | MS.gene04645:CDS |
| GGTGGCGAGACGGCGTTTGA+TGG | 0.437023 | 7.3:-17160295 | None:intergenic |
| ATTAAGCGGTATTTGTTGCT+TGG | 0.439442 | 7.3:+17161581 | MS.gene04645:CDS |
| ATGAAAGCGGTGATAGGGGC+TGG | 0.445222 | 7.3:+17161780 | MS.gene04645:CDS |
| GGATTCAATTAGGGTTTCTA+GGG | 0.447671 | 7.3:+17160731 | MS.gene04645:CDS |
| TGCCACATGAAAGCGGTGAT+AGG | 0.449321 | 7.3:+17161774 | MS.gene04645:CDS |
| GGATGTTGGGACGGTTGGGC+AGG | 0.452257 | 7.3:+17160851 | MS.gene04645:CDS |
| TTTGCGGGCACAGAAAGTTC+AGG | 0.456716 | 7.3:-17161644 | None:intergenic |
| GGGAGTTAGGGTTTATGGGT+TGG | 0.459109 | 7.3:-17160179 | None:intergenic |
| GATGGAATCGGCGACGGCGG+CGG | 0.459167 | 7.3:-17160277 | None:intergenic |
| AATATCTAATGGATATTGTT+GGG | 0.459669 | 7.3:+17161621 | MS.gene04645:CDS |
| TTTGGGTAGGTCTCCGGTAG+AGG | 0.461635 | 7.3:+17160830 | MS.gene04645:CDS |
| GCCACATGAAAGCGGTGATA+GGG | 0.462826 | 7.3:+17161775 | MS.gene04645:CDS |
| CGGTATTTGTTGCTTGGCCA+AGG | 0.464399 | 7.3:+17161587 | MS.gene04645:CDS |
| CAGATTTGGTTGAGAAGTGT+AGG | 0.464625 | 7.3:+17161054 | MS.gene04645:CDS |
| TGGTGGAGAATTTGGTGTAA+AGG | 0.473754 | 7.3:-17160353 | None:intergenic |
| TCCGATTCCGTTGCTGTCTG+AGG | 0.477670 | 7.3:+17160950 | MS.gene04645:CDS |
| GAAAGAGCTTATTGTGTTTG+CGG | 0.479203 | 7.3:-17161660 | None:intergenic |
| TTATGGGTTGGGAATTTGGG+GGG | 0.480643 | 7.3:-17160167 | None:intergenic |
| TTGAAGTCTTGGAAATATCA+TGG | 0.481821 | 7.3:+17162092 | MS.gene04645:CDS |
| CTGTGAAAGCTGAATCGCTT+TGG | 0.486329 | 7.3:+17161264 | MS.gene04645:CDS |
| GGTCTCCGGTAGAGGATGTT+GGG | 0.490035 | 7.3:+17160838 | MS.gene04645:CDS |
| GATGAGTTTGGGTAGGTCTC+CGG | 0.491451 | 7.3:+17160824 | MS.gene04645:CDS |
| CCCTCAGACAGCAACGGAAT+CGG | 0.494521 | 7.3:-17160951 | None:intergenic |
| TAATTTCAACCCAAAGAACT+TGG | 0.495615 | 7.3:-17162033 | None:intergenic |
| AGGTCTCCGGTAGAGGATGT+TGG | 0.497314 | 7.3:+17160837 | MS.gene04645:CDS |
| AGATCAACATGCTGCTGCAC+AGG | 0.498245 | 7.3:-17162624 | None:intergenic |
| TTGCTGTGAGGACCGTGGTT+GGG | 0.500638 | 7.3:+17161391 | MS.gene04645:CDS |
| GGCGACGGCGGCGGAGTCGG+GGG | 0.503666 | 7.3:-17160268 | None:intergenic |
| TTATTGAGATGAGTTTGGGT+AGG | 0.504499 | 7.3:+17160817 | MS.gene04645:CDS |
| GAGTGATTATTATAAGTTGT+TGG | 0.505355 | 7.3:+17160902 | MS.gene04645:CDS |
| TGATATTGAAGAGATGAAGT+AGG | 0.510039 | 7.3:-17160404 | None:intergenic |
| ATCGATATGAGTGGCTTTGG+TGG | 0.511381 | 7.3:-17160370 | None:intergenic |
| AGTCATCGGAAGAAGAATCC+TGG | 0.512777 | 7.3:+17162478 | MS.gene04645:CDS |
| GAAGAATCCTGGATTGCTGA+TGG | 0.517806 | 7.3:+17162489 | MS.gene04645:CDS |
| TTTGCTGTGAGGACCGTGGT+TGG | 0.518184 | 7.3:+17161390 | MS.gene04645:CDS |
| AGAGAGGAGGTGGTGGACTA+GGG | 0.521000 | 7.3:-17160136 | None:intergenic |
| TGCAGCTAGTTTCAGCATTG+AGG | 0.525852 | 7.3:+17162005 | MS.gene04645:CDS |
| GAAAATAATGGATTTAATGA+TGG | 0.529424 | 7.3:+17160522 | MS.gene04645:CDS |
| ATTAGGGGTATTGTTTAAGA+GGG | 0.529812 | 7.3:+17160785 | MS.gene04645:CDS |
| CAATATCTAATGGATATTGT+TGG | 0.533980 | 7.3:+17161620 | MS.gene04645:CDS |
| TTTATGGGTTGGGAATTTGG+GGG | 0.534738 | 7.3:-17160168 | None:intergenic |
| TGAAAGCGGTGATAGGGGCT+GGG | 0.537532 | 7.3:+17161781 | MS.gene04645:CDS |
| TGTAAAGGTCAGCGAAGGAG+AGG | 0.539562 | 7.3:-17160338 | None:intergenic |
| AACATGCACTTATTGGTGCC+TGG | 0.540811 | 7.3:+17161918 | MS.gene04645:CDS |
| CAAAGCGATTCAGCTTTCAC+AGG | 0.540978 | 7.3:-17161263 | None:intergenic |
| GGGCTGGGATGTATTCTCAC+TGG | 0.541307 | 7.3:+17161796 | MS.gene04645:CDS |
| GAGACGGCGTTTGATGGAAT+CGG | 0.541621 | 7.3:-17160289 | None:intergenic |
| CGGGGAATTATTTATCGTTG+AGG | 0.543145 | 7.3:+17160982 | MS.gene04645:CDS |
| ATTGTAGAGAAATCTCTCCT+TGG | 0.543350 | 7.3:+17162193 | MS.gene04645:CDS |
| AGATTTGGTTGAGAAGTGTA+GGG | 0.543651 | 7.3:+17161055 | MS.gene04645:CDS |
| GCTGAATCGCTTTGGAGAGA+GGG | 0.544757 | 7.3:+17161272 | MS.gene04645:CDS |
| AGCTGAATCGCTTTGGAGAG+AGG | 0.546870 | 7.3:+17161271 | MS.gene04645:CDS |
| TATGCTTGTCAAGGTGTGGA+TGG | 0.547211 | 7.3:+17160663 | MS.gene04645:CDS |
| TCTATGGAAGCTTAAGAGAG+TGG | 0.549168 | 7.3:+17161895 | MS.gene04645:CDS |
| GATATTGAAGAGATGAAGTA+GGG | 0.550167 | 7.3:-17160403 | None:intergenic |
| TTCATAAACTCATGAACCAT+CGG | 0.551343 | 7.3:-17161134 | None:intergenic |
| AGAGAATGCGGTGAGCGTAA+CGG | 0.552079 | 7.3:-17160221 | None:intergenic |
| TTCATTTACATGCTAGACAT+GGG | 0.552742 | 7.3:+17161108 | MS.gene04645:CDS |
| AGAGAAGCCGAAATAAAAGA+AGG | 0.553481 | 7.3:-17161320 | None:intergenic |
| CCGATTCCGTTGCTGTCTGA+GGG | 0.554083 | 7.3:+17160951 | MS.gene04645:CDS |
| CCACTCATATCGATAATAAG+TGG | 0.554560 | 7.3:+17160379 | MS.gene04645:CDS |
| ATCAACCTCATCTTCACCAT+CGG | 0.554617 | 7.3:-17161029 | None:intergenic |
| TAAGTTGTTGGCTGTGCTTG+AGG | 0.555869 | 7.3:+17160914 | MS.gene04645:CDS |
| AAGTGAGATGGAAGTAGCCA+AGG | 0.558851 | 7.3:+17162126 | MS.gene04645:CDS |
| ACCGTCCCAACATCCTCTAC+CGG | 0.558936 | 7.3:-17160843 | None:intergenic |
| CACGGTCCTCACAGCAAACA+CGG | 0.559449 | 7.3:-17161385 | None:intergenic |
| GGAAGGGTCATTCGACTTAG+CGG | 0.560699 | 7.3:-17160448 | None:intergenic |
| TGCTAGACATGGGGATCCGA+TGG | 0.562527 | 7.3:+17161118 | MS.gene04645:CDS |
| CGTTAAATTGGGAAGAAGAA+CGG | 0.564292 | 7.3:-17160469 | None:intergenic |
| AAGTAGATCATCAAGATCCT+TGG | 0.565007 | 7.3:-17162143 | None:intergenic |
| GGCTTCGGAGGAACGACCAT+CGG | 0.566124 | 7.3:-17160316 | None:intergenic |
| TTTATCGTTGAGGAGATTAG+CGG | 0.569383 | 7.3:+17160992 | MS.gene04645:CDS |
| AAACGCCGTCTCGCCACCGA+TGG | 0.571083 | 7.3:+17160300 | MS.gene04645:CDS |
| GCGTTTGATGGAATCGGCGA+CGG | 0.574329 | 7.3:-17160283 | None:intergenic |
| TGAGTATGTGAAATTGATGA+AGG | 0.576385 | 7.3:+17160596 | MS.gene04645:CDS |
| GATGGTGAAGATGAGGTTGA+TGG | 0.578907 | 7.3:+17161031 | MS.gene04645:CDS |
| TCCGGTAGAGGATGTTGGGA+CGG | 0.579004 | 7.3:+17160842 | MS.gene04645:CDS |
| GATATTGCACAAAATCACCT+TGG | 0.583338 | 7.3:-17161604 | None:intergenic |
| AAGAATCCTGGATTGCTGAT+GGG | 0.583389 | 7.3:+17162490 | MS.gene04645:CDS |
| AGCACTGTCTTGCGATTAAG+CGG | 0.583774 | 7.3:+17161567 | MS.gene04645:CDS |
| ATTCATTTACATGCTAGACA+TGG | 0.583889 | 7.3:+17161107 | MS.gene04645:CDS |
| GCATTCATGAGTTGCAAGCA+AGG | 0.587012 | 7.3:+17162305 | MS.gene04645:CDS |
| GACTGAAGATACAGGGGCAA+TGG | 0.587037 | 7.3:+17161424 | MS.gene04645:CDS |
| TTCATCAACCAATGACTCAA+GGG | 0.587392 | 7.3:-17161483 | None:intergenic |
| CTTCATCAACCAATGACTCA+AGG | 0.590356 | 7.3:-17161484 | None:intergenic |
| TGATGTGACTGAGGAAGCTA+TGG | 0.592801 | 7.3:+17160626 | MS.gene04645:CDS |
| GGAGTATTCATCATTGCAAG+AGG | 0.593594 | 7.3:+17162584 | MS.gene04645:CDS |
| AGCGAAGGAGAGGGCTTCGG+AGG | 0.594136 | 7.3:-17160328 | None:intergenic |
| CCACATGAAAGCGGTGATAG+GGG | 0.595304 | 7.3:+17161776 | MS.gene04645:CDS |
| AACGACCATCGGTGGCGAGA+CGG | 0.598780 | 7.3:-17160305 | None:intergenic |
| GGTTTGGCTTGCTGAGCCGA+TGG | 0.602661 | 7.3:+17161013 | MS.gene04645:CDS |
| TTTGATGGAATCGGCGACGG+CGG | 0.604505 | 7.3:-17160280 | None:intergenic |
| CCCCTATCACCGCTTTCATG+TGG | 0.604989 | 7.3:-17161776 | None:intergenic |
| GTGCTGCGACTGAAGATACA+GGG | 0.606272 | 7.3:+17161417 | MS.gene04645:CDS |
| ATGCTTGTCAAGGTGTGGAT+GGG | 0.607920 | 7.3:+17160664 | MS.gene04645:CDS |
| TCTGTGAACACAGTATCTAG+TGG | 0.610337 | 7.3:-17161836 | None:intergenic |
| CCACTTATTATCGATATGAG+TGG | 0.611006 | 7.3:-17160379 | None:intergenic |
| GCGATTGACTGATAAGTCAT+CGG | 0.612217 | 7.3:+17162464 | MS.gene04645:CDS |
| GATTTATGCTTGTCAAGGTG+TGG | 0.612803 | 7.3:+17160659 | MS.gene04645:CDS |
| GGAAGAGAATGATGTGACTG+AGG | 0.613157 | 7.3:+17160617 | MS.gene04645:CDS |
| GATGTGATTTATGCTTGTCA+AGG | 0.615049 | 7.3:+17160654 | MS.gene04645:CDS |
| TTATAAGCTTTGTGAATTAG+GGG | 0.619485 | 7.3:+17160770 | MS.gene04645:CDS |
| CACTCATATCGATAATAAGT+GGG | 0.620520 | 7.3:+17160380 | MS.gene04645:CDS |
| TGGTGTTGTCATTCTTGCGA+GGG | 0.621820 | 7.3:+17160542 | MS.gene04645:CDS |
| AAATTGGGAAGAAGAACGGA+AGG | 0.626685 | 7.3:-17160465 | None:intergenic |
| AAAATTCATTGAAATCGAGA+CGG | 0.627773 | 7.3:-17162662 | None:intergenic |
| GTAAAGGTCAGCGAAGGAGA+GGG | 0.630006 | 7.3:-17160337 | None:intergenic |
| TTTCGGCTTCTCTTGCTCAG+AGG | 0.631708 | 7.3:+17161330 | MS.gene04645:CDS |
| TATTGGATGTAATTTATGAG+AGG | 0.636213 | 7.3:+17161531 | MS.gene04645:CDS |
| TTCGGAGGAACGACCATCGG+TGG | 0.637387 | 7.3:-17160313 | None:intergenic |
| GAATGCGGTGAGCGTAACGG+AGG | 0.637646 | 7.3:-17160218 | None:intergenic |
| GGGACTGAGAGAGTTCTCCA+AGG | 0.638568 | 7.3:-17162210 | None:intergenic |
| TGAGCCTATCCAAAATATCA+GGG | 0.639430 | 7.3:-17161739 | None:intergenic |
| TCATTTACATGCTAGACATG+GGG | 0.643297 | 7.3:+17161109 | MS.gene04645:CDS |
| TGGTTCATGAGTTTATGAAG+AGG | 0.645000 | 7.3:+17161138 | MS.gene04645:CDS |
| AAAGCCTTAACAAAACGCGC+TGG | 0.650198 | 7.3:+17162516 | MS.gene04645:CDS |
| ATGGTGTTGTCATTCTTGCG+AGG | 0.651353 | 7.3:+17160541 | MS.gene04645:CDS |
| GGGGCAATGGCAAGACGCGG+TGG | 0.651719 | 7.3:+17161437 | MS.gene04645:CDS |
| AAATTTGATGAAGAGAGTGA+TGG | 0.655630 | 7.3:+17160696 | MS.gene04645:CDS |
| CTGAGCCGATGGTGAAGATG+AGG | 0.659393 | 7.3:+17161024 | MS.gene04645:CDS |
| AATGCGGTGAGCGTAACGGA+GGG | 0.662551 | 7.3:-17160217 | None:intergenic |
| TTAAATGGGAAGAGAGAATG+CGG | 0.665172 | 7.3:-17160233 | None:intergenic |
| TGTCTGAGGGTGTGAGTTCG+GGG | 0.665593 | 7.3:+17160964 | MS.gene04645:CDS |
| TTTGGTGTAAAGGTCAGCGA+AGG | 0.667117 | 7.3:-17160343 | None:intergenic |
| TCGCAGCACGAGCCCAACCA+CGG | 0.667283 | 7.3:-17161403 | None:intergenic |
| AGGGTCATTCGACTTAGCGG+CGG | 0.668047 | 7.3:-17160445 | None:intergenic |
| AAAATGATGCCACATGAAAG+CGG | 0.670653 | 7.3:+17161767 | MS.gene04645:CDS |
| GAGAATAACGTTCGACGACG+CGG | 0.671355 | 7.3:+17160498 | MS.gene04645:CDS |
| CTCACACCCTCAGACAGCAA+CGG | 0.671898 | 7.3:-17160957 | None:intergenic |
| CGTGTTTGCTGTGAGGACCG+TGG | 0.673375 | 7.3:+17161386 | MS.gene04645:CDS |
| CTTCGTATAAAATATCCGCA+TGG | 0.678523 | 7.3:-17162282 | None:intergenic |
| ACAGGGGCAATGGCAAGACG+CGG | 0.679094 | 7.3:+17161434 | MS.gene04645:CDS |
| CTGGTCTCGAGAGGACAGTG+AGG | 0.696188 | 7.3:-17162427 | None:intergenic |
| TGCTGCGACTGAAGATACAG+GGG | 0.704839 | 7.3:+17161418 | MS.gene04645:CDS |
| TCACAGAGTCTGTGATGACG+AGG | 0.709275 | 7.3:+17161852 | MS.gene04645:CDS |
| AATTGGGAAGAAGAACGGAA+GGG | 0.734226 | 7.3:-17160464 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGAATTTTTAATTTTCTA+TGG | + | chr7.3:17161879-17161898 | MS.gene04645:CDS | 10.0% |
| !!! | AATATCTAATGGATATTGTT+GGG | + | chr7.3:17161621-17161640 | MS.gene04645:CDS | 20.0% |
| !!! | ATGTTTTATTGGATTCAATT+AGG | + | chr7.3:17160721-17160740 | MS.gene04645:CDS | 20.0% |
| !!! | ATTTCAATGAATTTTATAGG+CGG | + | chr7.3:17162670-17162689 | MS.gene04645:CDS | 20.0% |
| !!! | GAAAATAATGGATTTAATGA+TGG | + | chr7.3:17160522-17160541 | MS.gene04645:CDS | 20.0% |
| !!! | TCGATTTCAATGAATTTTAT+AGG | + | chr7.3:17162667-17162686 | MS.gene04645:CDS | 20.0% |
| !!! | TGTTTTATTGGATTCAATTA+GGG | + | chr7.3:17160722-17160741 | MS.gene04645:CDS | 20.0% |
| !!! | TTATATAATGTTTGAAGTCT+TGG | + | chr7.3:17162081-17162100 | MS.gene04645:CDS | 20.0% |
| !!! | TTGATCTTATATTACGTTTT+CGG | + | chr7.3:17162257-17162276 | MS.gene04645:CDS | 20.0% |
| !!! | TTTATAAGCTTTGTGAATTA+GGG | + | chr7.3:17160769-17160788 | MS.gene04645:CDS | 20.0% |
| ! | AAAATTCATTGAAATCGAGA+CGG | - | chr7.3:17162665-17162684 | None:intergenic | 25.0% |
| ! | AAGAATTGATAAGCATCTAT+TGG | + | chr7.3:17161514-17161533 | MS.gene04645:CDS | 25.0% |
| ! | GAGTGATTATTATAAGTTGT+TGG | + | chr7.3:17160902-17160921 | MS.gene04645:CDS | 25.0% |
| ! | GTATTAGAAGTTATGCAATT+TGG | - | chr7.3:17161956-17161975 | None:intergenic | 25.0% |
| ! | TATTGGATGTAATTTATGAG+AGG | + | chr7.3:17161531-17161550 | MS.gene04645:CDS | 25.0% |
| !! | CAATATCTAATGGATATTGT+TGG | + | chr7.3:17161620-17161639 | MS.gene04645:CDS | 25.0% |
| !! | GTTTATAAGCTTTGTGAATT+AGG | + | chr7.3:17160768-17160787 | MS.gene04645:CDS | 25.0% |
| !! | TACTATTAGTGACTTGTAAA+GGG | - | chr7.3:17162233-17162252 | None:intergenic | 25.0% |
| !! | TGATTTTGTGCAATATCTAA+TGG | + | chr7.3:17161610-17161629 | MS.gene04645:CDS | 25.0% |
| !! | TTACTATTAGTGACTTGTAA+AGG | - | chr7.3:17162234-17162253 | None:intergenic | 25.0% |
| !! | TTATAAGCTTTGTGAATTAG+GGG | + | chr7.3:17160770-17160789 | MS.gene04645:CDS | 25.0% |
| !! | TTGTTGAGTTTTTCATTGTT+GGG | + | chr7.3:17161237-17161256 | MS.gene04645:CDS | 25.0% |
| !! | TTTCAATGAATTTTATAGGC+GGG | + | chr7.3:17162671-17162690 | MS.gene04645:CDS | 25.0% |
| !! | TTTGTTGAGTTTTTCATTGT+TGG | + | chr7.3:17161236-17161255 | MS.gene04645:CDS | 25.0% |
| !!! | TATGCTTCCTTCTTTTATTT+CGG | + | chr7.3:17161313-17161332 | MS.gene04645:CDS | 25.0% |
| AAATGTCAAACATGGCAATA+TGG | - | chr7.3:17162377-17162396 | None:intergenic | 30.0% | |
| AAATTTGATGAAGAGAGTGA+TGG | + | chr7.3:17160696-17160715 | MS.gene04645:CDS | 30.0% | |
| AATGTCAAACATGGCAATAT+GGG | - | chr7.3:17162376-17162395 | None:intergenic | 30.0% | |
| AGATGATCAAATGTCAAACA+TGG | - | chr7.3:17162385-17162404 | None:intergenic | 30.0% | |
| AGCATGTTGCAATCTATTAA+AGG | - | chr7.3:17161978-17161997 | None:intergenic | 30.0% | |
| ATTCATTTACATGCTAGACA+TGG | + | chr7.3:17161107-17161126 | MS.gene04645:CDS | 30.0% | |
| ATTCTCCGAAATCGTTAAAT+TGG | - | chr7.3:17160484-17160503 | None:intergenic | 30.0% | |
| CACTCATATCGATAATAAGT+GGG | + | chr7.3:17160380-17160399 | MS.gene04645:CDS | 30.0% | |
| GATATTGAAGAGATGAAGTA+GGG | - | chr7.3:17160406-17160425 | None:intergenic | 30.0% | |
| TAATTTCAACCCAAAGAACT+TGG | - | chr7.3:17162036-17162055 | None:intergenic | 30.0% | |
| TATTGTTTAAGAGGGTTGTT+GGG | + | chr7.3:17160793-17160812 | MS.gene04645:CDS | 30.0% | |
| TCTTCCCAATTTAACGATTT+CGG | + | chr7.3:17160476-17160495 | MS.gene04645:CDS | 30.0% | |
| TGAGTATGTGAAATTGATGA+AGG | + | chr7.3:17160596-17160615 | MS.gene04645:CDS | 30.0% | |
| TGATATTGAAGAGATGAAGT+AGG | - | chr7.3:17160407-17160426 | None:intergenic | 30.0% | |
| TGGTGAATTTCTCCAAAAAA+TGG | + | chr7.3:17162536-17162555 | MS.gene04645:CDS | 30.0% | |
| TTCATAAACTCATGAACCAT+CGG | - | chr7.3:17161137-17161156 | None:intergenic | 30.0% | |
| TTCATTTACATGCTAGACAT+GGG | + | chr7.3:17161108-17161127 | MS.gene04645:CDS | 30.0% | |
| TTCTCCGAAATCGTTAAATT+GGG | - | chr7.3:17160483-17160502 | None:intergenic | 30.0% | |
| TTGAAGTCTTGGAAATATCA+TGG | + | chr7.3:17162092-17162111 | MS.gene04645:CDS | 30.0% | |
| ! | AGTTATGCAATTTGGTTTCA+TGG | - | chr7.3:17161948-17161967 | None:intergenic | 30.0% |
| ! | GAGTGATGGTTATGTTTTAT+TGG | + | chr7.3:17160710-17160729 | MS.gene04645:CDS | 30.0% |
| !! | AATTAGGGGTATTGTTTAAG+AGG | + | chr7.3:17160784-17160803 | MS.gene04645:CDS | 30.0% |
| !! | ATTAGGGGTATTGTTTAAGA+GGG | + | chr7.3:17160785-17160804 | MS.gene04645:CDS | 30.0% |
| !!! | GTCAAACTTTTTAAGTGAGA+TGG | + | chr7.3:17162114-17162133 | MS.gene04645:CDS | 30.0% |
| AAAATGATGCCACATGAAAG+CGG | + | chr7.3:17161767-17161786 | MS.gene04645:CDS | 35.0% | |
| AAAGAGCTTATTGTGTTTGC+GGG | - | chr7.3:17161662-17161681 | None:intergenic | 35.0% | |
| AAGTAGATCATCAAGATCCT+TGG | - | chr7.3:17162146-17162165 | None:intergenic | 35.0% | |
| AATATGGGGAGAAGAAATTG+AGG | - | chr7.3:17162361-17162380 | None:intergenic | 35.0% | |
| AGAGAAGCCGAAATAAAAGA+AGG | - | chr7.3:17161323-17161342 | None:intergenic | 35.0% | |
| AGATCTGGATGCAATATCTA+AGG | + | chr7.3:17162563-17162582 | MS.gene04645:CDS | 35.0% | |
| ATAAGCTCTTTCAAACTTGC+AGG | + | chr7.3:17161671-17161690 | MS.gene04645:CDS | 35.0% | |
| ATGTCAAACATGGCAATATG+GGG | - | chr7.3:17162375-17162394 | None:intergenic | 35.0% | |
| ATTATCGATATGAGTGGCTT+TGG | - | chr7.3:17160376-17160395 | None:intergenic | 35.0% | |
| ATTGTAGAGAAATCTCTCCT+TGG | + | chr7.3:17162193-17162212 | MS.gene04645:CDS | 35.0% | |
| CCAAAAAATGGAACAAGATC+TGG | + | chr7.3:17162548-17162567 | MS.gene04645:CDS | 35.0% | |
| CCACTCATATCGATAATAAG+TGG | + | chr7.3:17160379-17160398 | MS.gene04645:CDS | 35.0% | |
| CCACTTATTATCGATATGAG+TGG | - | chr7.3:17160382-17160401 | None:intergenic | 35.0% | |
| CGTTAAATTGGGAAGAAGAA+CGG | - | chr7.3:17160472-17160491 | None:intergenic | 35.0% | |
| CTCTTCACCATTTCAAAAAG+CGG | - | chr7.3:17161185-17161204 | None:intergenic | 35.0% | |
| CTTCGTATAAAATATCCGCA+TGG | - | chr7.3:17162285-17162304 | None:intergenic | 35.0% | |
| GAAAGAGCTTATTGTGTTTG+CGG | - | chr7.3:17161663-17161682 | None:intergenic | 35.0% | |
| GATATTGCACAAAATCACCT+TGG | - | chr7.3:17161607-17161626 | None:intergenic | 35.0% | |
| GATGTGATTTATGCTTGTCA+AGG | + | chr7.3:17160654-17160673 | MS.gene04645:CDS | 35.0% | |
| GCAAACACGGAGAAAATTTA+TGG | - | chr7.3:17161375-17161394 | None:intergenic | 35.0% | |
| GGATTCAATTAGGGTTTCTA+GGG | + | chr7.3:17160731-17160750 | MS.gene04645:CDS | 35.0% | |
| GGGTTTATTGAGATGAGTTT+GGG | + | chr7.3:17160813-17160832 | MS.gene04645:CDS | 35.0% | |
| GTATTGTTTAAGAGGGTTGT+TGG | + | chr7.3:17160792-17160811 | MS.gene04645:CDS | 35.0% | |
| TCATTTACATGCTAGACATG+GGG | + | chr7.3:17161109-17161128 | MS.gene04645:CDS | 35.0% | |
| TGAGCCTATCCAAAATATCA+GGG | - | chr7.3:17161742-17161761 | None:intergenic | 35.0% | |
| TGGATTCAATTAGGGTTTCT+AGG | + | chr7.3:17160730-17160749 | MS.gene04645:CDS | 35.0% | |
| TGGGTTTATTGAGATGAGTT+TGG | + | chr7.3:17160812-17160831 | MS.gene04645:CDS | 35.0% | |
| TGGTTCATGAGTTTATGAAG+AGG | + | chr7.3:17161138-17161157 | MS.gene04645:CDS | 35.0% | |
| TTAAATGGGAAGAGAGAATG+CGG | - | chr7.3:17160236-17160255 | None:intergenic | 35.0% | |
| TTATTGAGATGAGTTTGGGT+AGG | + | chr7.3:17160817-17160836 | MS.gene04645:CDS | 35.0% | |
| TTCATCAACCAATGACTCAA+GGG | - | chr7.3:17161486-17161505 | None:intergenic | 35.0% | |
| TTTATCGTTGAGGAGATTAG+CGG | + | chr7.3:17160992-17161011 | MS.gene04645:CDS | 35.0% | |
| ! | AGATTTGGTTGAGAAGTGTA+GGG | + | chr7.3:17161055-17161074 | MS.gene04645:CDS | 35.0% |
| ! | ATTAAGCGGTATTTGTTGCT+TGG | + | chr7.3:17161581-17161600 | MS.gene04645:CDS | 35.0% |
| ! | CATGCGGATATTTTATACGA+AGG | + | chr7.3:17162283-17162302 | MS.gene04645:CDS | 35.0% |
| ! | GTATGATGACCCTGATATTT+TGG | + | chr7.3:17161730-17161749 | MS.gene04645:CDS | 35.0% |
| !! | ATGACCCTGATATTTTGGAT+AGG | + | chr7.3:17161735-17161754 | MS.gene04645:CDS | 35.0% |
| !! | TGATATTTTGGATAGGCTCA+GGG | + | chr7.3:17161742-17161761 | MS.gene04645:CDS | 35.0% |
| !!! | CCAGATCTTGTTCCATTTTT+TGG | - | chr7.3:17162551-17162570 | None:intergenic | 35.0% |
| !!! | TTTTGAAATGGTGAAGAGGT+GGG | + | chr7.3:17161187-17161206 | MS.gene04645:CDS | 35.0% |
| !!! | TTTTTGAAATGGTGAAGAGG+TGG | + | chr7.3:17161186-17161205 | MS.gene04645:CDS | 35.0% |
| AAATTGGGAAGAAGAACGGA+AGG | - | chr7.3:17160468-17160487 | None:intergenic | 40.0% | |
| AACTGATACCCTTGAGTCAT+TGG | + | chr7.3:17161475-17161494 | MS.gene04645:CDS | 40.0% | |
| AAGAATCCTGGATTGCTGAT+GGG | + | chr7.3:17162490-17162509 | MS.gene04645:CDS | 40.0% | |
| AATTGGGAAGAAGAACGGAA+GGG | - | chr7.3:17160467-17160486 | None:intergenic | 40.0% | |
| AGAGTGGAACATGCACTTAT+TGG | + | chr7.3:17161911-17161930 | MS.gene04645:CDS | 40.0% | |
| ATCAACCTCATCTTCACCAT+CGG | - | chr7.3:17161032-17161051 | None:intergenic | 40.0% | |
| CGGGGAATTATTTATCGTTG+AGG | + | chr7.3:17160982-17161001 | MS.gene04645:CDS | 40.0% | |
| CTGAGCCTATCCAAAATATC+AGG | - | chr7.3:17161743-17161762 | None:intergenic | 40.0% | |
| CTTCATCAACCAATGACTCA+AGG | - | chr7.3:17161487-17161506 | None:intergenic | 40.0% | |
| GATTTATGCTTGTCAAGGTG+TGG | + | chr7.3:17160659-17160678 | MS.gene04645:CDS | 40.0% | |
| GCGATTGACTGATAAGTCAT+CGG | + | chr7.3:17162464-17162483 | MS.gene04645:CDS | 40.0% | |
| GCGATTTCTCGTCTATTCTT+CGG | - | chr7.3:17160570-17160589 | None:intergenic | 40.0% | |
| TCTATGGAAGCTTAAGAGAG+TGG | + | chr7.3:17161895-17161914 | MS.gene04645:CDS | 40.0% | |
| TCTGTGAACACAGTATCTAG+TGG | - | chr7.3:17161839-17161858 | None:intergenic | 40.0% | |
| TTTCAAACTTGCAGGTTTGC+TGG | + | chr7.3:17161679-17161698 | MS.gene04645:CDS | 40.0% | |
| TTTGCTGGAAACAGCAATTC+GGG | + | chr7.3:17161694-17161713 | MS.gene04645:CDS | 40.0% | |
| ! | ACTAGGGCTTTTACTAGATC+TGG | - | chr7.3:17160123-17160142 | None:intergenic | 40.0% |
| ! | ATCGCTTCTGTGTTTTCTTC+TGG | - | chr7.3:17162449-17162468 | None:intergenic | 40.0% |
| ! | ATTTGGTTTCATGGTCTTCC+AGG | - | chr7.3:17161939-17161958 | None:intergenic | 40.0% |
| ! | CAGATTTGGTTGAGAAGTGT+AGG | + | chr7.3:17161054-17161073 | MS.gene04645:CDS | 40.0% |
| ! | CTAGGGCTTTTACTAGATCT+GGG | - | chr7.3:17160122-17160141 | None:intergenic | 40.0% |
| ! | GGAGTATTCATCATTGCAAG+AGG | + | chr7.3:17162584-17162603 | MS.gene04645:CDS | 40.0% |
| ! | GTTTGCTGGAAACAGCAATT+CGG | + | chr7.3:17161693-17161712 | MS.gene04645:CDS | 40.0% |
| ! | TTTGGAATTGAGGGGAGTTA+GGG | - | chr7.3:17160194-17160213 | None:intergenic | 40.0% |
| !! | CTGATATTTTGGATAGGCTC+AGG | + | chr7.3:17161741-17161760 | MS.gene04645:CDS | 40.0% |
| !! | GGTTTATGGGTTGGGAATTT+GGG | - | chr7.3:17160173-17160192 | None:intergenic | 40.0% |
| !! | GTTTATGGGTTGGGAATTTG+GGG | - | chr7.3:17160172-17160191 | None:intergenic | 40.0% |
| !! | TGGTGGAGAATTTGGTGTAA+AGG | - | chr7.3:17160356-17160375 | None:intergenic | 40.0% |
| !! | TTCTAGGGCTAGTAGTAGTA+TGG | + | chr7.3:17160746-17160765 | MS.gene04645:CDS | 40.0% |
| !! | TTTATGGGTTGGGAATTTGG+GGG | - | chr7.3:17160171-17160190 | None:intergenic | 40.0% |
| !!! | AAGTGTAGGGTTTTAAGAGG+TGG | + | chr7.3:17161068-17161087 | MS.gene04645:CDS | 40.0% |
| !!! | AGTGTAGGGTTTTAAGAGGT+GGG | + | chr7.3:17161069-17161088 | MS.gene04645:CDS | 40.0% |
| !!! | CGCTTTTTGAAATGGTGAAG+AGG | + | chr7.3:17161183-17161202 | MS.gene04645:CDS | 40.0% |
| !!! | GAGAAGTGTAGGGTTTTAAG+AGG | + | chr7.3:17161065-17161084 | MS.gene04645:CDS | 40.0% |
| !!! | GTGTTCTCCGCTTTTTGAAA+TGG | + | chr7.3:17161175-17161194 | MS.gene04645:CDS | 40.0% |
| !!! | TTTTGGAATTGAGGGGAGTT+AGG | - | chr7.3:17160195-17160214 | None:intergenic | 40.0% |
| AAAGCCTTAACAAAACGCGC+TGG | + | chr7.3:17162516-17162535 | MS.gene04645:CDS | 45.0% | |
| AAGTGAGATGGAAGTAGCCA+AGG | + | chr7.3:17162126-17162145 | MS.gene04645:CDS | 45.0% | |
| AGCACTGTCTTGCGATTAAG+CGG | + | chr7.3:17161567-17161586 | MS.gene04645:CDS | 45.0% | |
| AGTCATCGGAAGAAGAATCC+TGG | + | chr7.3:17162478-17162497 | MS.gene04645:CDS | 45.0% | |
| ATGCTTGTCAAGGTGTGGAT+GGG | + | chr7.3:17160664-17160683 | MS.gene04645:CDS | 45.0% | |
| CAAAGCGATTCAGCTTTCAC+AGG | - | chr7.3:17161266-17161285 | None:intergenic | 45.0% | |
| CTGTGAAAGCTGAATCGCTT+TGG | + | chr7.3:17161264-17161283 | MS.gene04645:CDS | 45.0% | |
| GAAGAATCCTGGATTGCTGA+TGG | + | chr7.3:17162489-17162508 | MS.gene04645:CDS | 45.0% | |
| GATGGTGAAGATGAGGTTGA+TGG | + | chr7.3:17161031-17161050 | MS.gene04645:CDS | 45.0% | |
| GCATTCATGAGTTGCAAGCA+AGG | + | chr7.3:17162305-17162324 | MS.gene04645:CDS | 45.0% | |
| GGAAGAGAATGATGTGACTG+AGG | + | chr7.3:17160617-17160636 | MS.gene04645:CDS | 45.0% | |
| GGAGTTAGGGTTTATGGGTT+GGG | - | chr7.3:17160181-17160200 | None:intergenic | 45.0% | |
| TATGCTTGTCAAGGTGTGGA+TGG | + | chr7.3:17160663-17160682 | MS.gene04645:CDS | 45.0% | |
| TGAGGGGAGTTAGGGTTTAT+GGG | - | chr7.3:17160186-17160205 | None:intergenic | 45.0% | |
| TGATGTGACTGAGGAAGCTA+TGG | + | chr7.3:17160626-17160645 | MS.gene04645:CDS | 45.0% | |
| TTGAGGGGAGTTAGGGTTTA+TGG | - | chr7.3:17160187-17160206 | None:intergenic | 45.0% | |
| ! | AACATGCACTTATTGGTGCC+TGG | + | chr7.3:17161918-17161937 | MS.gene04645:CDS | 45.0% |
| ! | ATTACGTTTTCGGAGCCATG+CGG | + | chr7.3:17162267-17162286 | MS.gene04645:CDS | 45.0% |
| ! | CTCTTGCTCAGAGGATTTTG+AGG | + | chr7.3:17161339-17161358 | MS.gene04645:CDS | 45.0% |
| ! | TAAGTTGTTGGCTGTGCTTG+AGG | + | chr7.3:17160914-17160933 | MS.gene04645:CDS | 45.0% |
| ! | TGCAGCTAGTTTCAGCATTG+AGG | + | chr7.3:17162005-17162024 | MS.gene04645:CDS | 45.0% |
| ! | TGTTTTCTTCTGGTCTCGAG+AGG | - | chr7.3:17162439-17162458 | None:intergenic | 45.0% |
| ! | TTTGGTGTAAAGGTCAGCGA+AGG | - | chr7.3:17160346-17160365 | None:intergenic | 45.0% |
| ! | TTTTCTCCCATCAGCAATCC+AGG | - | chr7.3:17162499-17162518 | None:intergenic | 45.0% |
| !! | AATGGTGAAGAGGTGGGTTT+TGG | + | chr7.3:17161193-17161212 | MS.gene04645:CDS | 45.0% |
| !! | AGTGGCTTTGGTGGAGAATT+TGG | - | chr7.3:17160364-17160383 | None:intergenic | 45.0% |
| !! | ATCGATATGAGTGGCTTTGG+TGG | - | chr7.3:17160373-17160392 | None:intergenic | 45.0% |
| !! | ATGGTGTTGTCATTCTTGCG+AGG | + | chr7.3:17160541-17160560 | MS.gene04645:CDS | 45.0% |
| !! | GATGAGGTTGATGGCAGATT+TGG | + | chr7.3:17161040-17161059 | MS.gene04645:CDS | 45.0% |
| !! | GGGTTTATGGGTTGGGAATT+TGG | - | chr7.3:17160174-17160193 | None:intergenic | 45.0% |
| !! | TGGTGTTGTCATTCTTGCGA+GGG | + | chr7.3:17160542-17160561 | MS.gene04645:CDS | 45.0% |
| !! | TTATGGGTTGGGAATTTGGG+GGG | - | chr7.3:17160170-17160189 | None:intergenic | 45.0% |
| !! | TTCACCAGCGCGTTTTGTTA+AGG | - | chr7.3:17162523-17162542 | None:intergenic | 45.0% |
| !!! | GAGGGAGTTTTGGAATTGAG+GGG | - | chr7.3:17160202-17160221 | None:intergenic | 45.0% |
| !!! | GGAGGGAGTTTTGGAATTGA+GGG | - | chr7.3:17160203-17160222 | None:intergenic | 45.0% |
| !!! | GTGTAGGGTTTTAAGAGGTG+GGG | + | chr7.3:17161070-17161089 | MS.gene04645:CDS | 45.0% |
| !!! | TGAAGAGGTGGGTTTTGGAA+GGG | + | chr7.3:17161198-17161217 | MS.gene04645:CDS | 45.0% |
| !!! | TTTTCTCCGTGTTTGCTGTG+AGG | + | chr7.3:17161379-17161398 | MS.gene04645:CDS | 45.0% |
| AGAGAATGCGGTGAGCGTAA+CGG | - | chr7.3:17160224-17160243 | None:intergenic | 50.0% | |
| AGATCAACATGCTGCTGCAC+AGG | - | chr7.3:17162627-17162646 | None:intergenic | 50.0% | |
| CCACATGAAAGCGGTGATAG+GGG | + | chr7.3:17161776-17161795 | MS.gene04645:CDS | 50.0% | |
| CGACGACGCGGTGAAAATAA+TGG | + | chr7.3:17160510-17160529 | MS.gene04645:CDS | 50.0% | |
| CGTTGAGGAGATTAGCGGTT+TGG | + | chr7.3:17160997-17161016 | MS.gene04645:CDS | 50.0% | |
| GACTGAAGATACAGGGGCAA+TGG | + | chr7.3:17161424-17161443 | MS.gene04645:CDS | 50.0% | |
| GAGAATAACGTTCGACGACG+CGG | + | chr7.3:17160498-17160517 | MS.gene04645:CDS | 50.0% | |
| GAGACGGCGTTTGATGGAAT+CGG | - | chr7.3:17160292-17160311 | None:intergenic | 50.0% | |
| GATGAGTTTGGGTAGGTCTC+CGG | + | chr7.3:17160824-17160843 | MS.gene04645:CDS | 50.0% | |
| GCCACATGAAAGCGGTGATA+GGG | + | chr7.3:17161775-17161794 | MS.gene04645:CDS | 50.0% | |
| GGAAGGGTCATTCGACTTAG+CGG | - | chr7.3:17160451-17160470 | None:intergenic | 50.0% | |
| GGGAGTTAGGGTTTATGGGT+TGG | - | chr7.3:17160182-17160201 | None:intergenic | 50.0% | |
| GTAAAGGTCAGCGAAGGAGA+GGG | - | chr7.3:17160340-17160359 | None:intergenic | 50.0% | |
| GTGCTGCGACTGAAGATACA+GGG | + | chr7.3:17161417-17161436 | MS.gene04645:CDS | 50.0% | |
| TAGAGGATGTTGGGACGGTT+GGG | + | chr7.3:17160847-17160866 | MS.gene04645:CDS | 50.0% | |
| TGCCACATGAAAGCGGTGAT+AGG | + | chr7.3:17161774-17161793 | MS.gene04645:CDS | 50.0% | |
| TGCTGCGACTGAAGATACAG+GGG | + | chr7.3:17161418-17161437 | MS.gene04645:CDS | 50.0% | |
| TGTAAAGGTCAGCGAAGGAG+AGG | - | chr7.3:17160341-17160360 | None:intergenic | 50.0% | |
| TTTCGGCTTCTCTTGCTCAG+AGG | + | chr7.3:17161330-17161349 | MS.gene04645:CDS | 50.0% | |
| TTTGCGGGCACAGAAAGTTC+AGG | - | chr7.3:17161647-17161666 | None:intergenic | 50.0% | |
| ! | CGGTATTTGTTGCTTGGCCA+AGG | + | chr7.3:17161587-17161606 | MS.gene04645:CDS | 50.0% |
| ! | GGCTTTTTGTGCTGCATTGC+AGG | + | chr7.3:17160872-17160891 | MS.gene04645:CDS | 50.0% |
| ! | TCACAGAGTCTGTGATGACG+AGG | + | chr7.3:17161852-17161871 | MS.gene04645:CDS | 50.0% |
| !! | AGCTGAATCGCTTTGGAGAG+AGG | + | chr7.3:17161271-17161290 | MS.gene04645:CDS | 50.0% |
| !! | CGCTTTGGAGAGAGGGATAT+AGG | + | chr7.3:17161279-17161298 | MS.gene04645:CDS | 50.0% |
| !! | GATTTTGAGAGAGGAGGTGG+TGG | - | chr7.3:17160146-17160165 | None:intergenic | 50.0% |
| !! | GCTCAGAGGATTTTGAGGAC+TGG | + | chr7.3:17161344-17161363 | MS.gene04645:CDS | 50.0% |
| !! | GCTGAATCGCTTTGGAGAGA+GGG | + | chr7.3:17161272-17161291 | MS.gene04645:CDS | 50.0% |
| !! | GGAGATTTTGAGAGAGGAGG+TGG | - | chr7.3:17160149-17160168 | None:intergenic | 50.0% |
| !! | GGTGATGGAGGGGGTTAAAT+GGG | - | chr7.3:17160250-17160269 | None:intergenic | 50.0% |
| !! | TTGGGGGGAGATTTTGAGAG+AGG | - | chr7.3:17160155-17160174 | None:intergenic | 50.0% |
| !!! | AGACGCGGTGGTTTTGGTTA+CGG | + | chr7.3:17161449-17161468 | MS.gene04645:CDS | 50.0% |
| !!! | CGGAGGGAGTTTTGGAATTG+AGG | - | chr7.3:17160204-17160223 | None:intergenic | 50.0% |
| !!! | GAAGAGGTGGGTTTTGGAAG+GGG | + | chr7.3:17161199-17161218 | MS.gene04645:CDS | 50.0% |
| !!! | GTGAAGAGGTGGGTTTTGGA+AGG | + | chr7.3:17161197-17161216 | MS.gene04645:CDS | 50.0% |
| ACCGTCCCAACATCCTCTAC+CGG | - | chr7.3:17160846-17160865 | None:intergenic | 55.0% | |
| AGGGTCATTCGACTTAGCGG+CGG | - | chr7.3:17160448-17160467 | None:intergenic | 55.0% | |
| AGGTCTCCGGTAGAGGATGT+TGG | + | chr7.3:17160837-17160856 | MS.gene04645:CDS | 55.0% | |
| ATGAAAGCGGTGATAGGGGC+TGG | + | chr7.3:17161780-17161799 | MS.gene04645:CDS | 55.0% | |
| CACGGTCCTCACAGCAAACA+CGG | - | chr7.3:17161388-17161407 | None:intergenic | 55.0% | |
| CCCCTATCACCGCTTTCATG+TGG | - | chr7.3:17161779-17161798 | None:intergenic | 55.0% | |
| CCCTCAGACAGCAACGGAAT+CGG | - | chr7.3:17160954-17160973 | None:intergenic | 55.0% | |
| CCGATTCCGTTGCTGTCTGA+GGG | + | chr7.3:17160951-17160970 | MS.gene04645:CDS | 55.0% | |
| CGTGCTGCGACTGAAGATAC+AGG | + | chr7.3:17161416-17161435 | MS.gene04645:CDS | 55.0% | |
| CTCACACCCTCAGACAGCAA+CGG | - | chr7.3:17160960-17160979 | None:intergenic | 55.0% | |
| CTGAGCCGATGGTGAAGATG+AGG | + | chr7.3:17161024-17161043 | MS.gene04645:CDS | 55.0% | |
| GCGTTTGATGGAATCGGCGA+CGG | - | chr7.3:17160286-17160305 | None:intergenic | 55.0% | |
| GGGACTGAGAGAGTTCTCCA+AGG | - | chr7.3:17162213-17162232 | None:intergenic | 55.0% | |
| GGGCTGGGATGTATTCTCAC+TGG | + | chr7.3:17161796-17161815 | MS.gene04645:CDS | 55.0% | |
| GGTCTCCGGTAGAGGATGTT+GGG | + | chr7.3:17160838-17160857 | MS.gene04645:CDS | 55.0% | |
| GTAGAGGATGTTGGGACGGT+TGG | + | chr7.3:17160846-17160865 | MS.gene04645:CDS | 55.0% | |
| TCCGATTCCGTTGCTGTCTG+AGG | + | chr7.3:17160950-17160969 | MS.gene04645:CDS | 55.0% | |
| TCCGGTAGAGGATGTTGGGA+CGG | + | chr7.3:17160842-17160861 | MS.gene04645:CDS | 55.0% | |
| TGAAAGCGGTGATAGGGGCT+GGG | + | chr7.3:17161781-17161800 | MS.gene04645:CDS | 55.0% | |
| TGCTAGACATGGGGATCCGA+TGG | + | chr7.3:17161118-17161137 | MS.gene04645:CDS | 55.0% | |
| TTGCTGTGAGGACCGTGGTT+GGG | + | chr7.3:17161391-17161410 | MS.gene04645:CDS | 55.0% | |
| TTTAAGAGGTGGGGCGATGG+CGG | + | chr7.3:17161079-17161098 | MS.gene04645:CDS | 55.0% | |
| TTTGATGGAATCGGCGACGG+CGG | - | chr7.3:17160283-17160302 | None:intergenic | 55.0% | |
| TTTGGGTAGGTCTCCGGTAG+AGG | + | chr7.3:17160830-17160849 | MS.gene04645:CDS | 55.0% | |
| ! | AATGCGGTGAGCGTAACGGA+GGG | - | chr7.3:17160220-17160239 | None:intergenic | 55.0% |
| ! | ATGGCAAGACGCGGTGGTTT+TGG | + | chr7.3:17161443-17161462 | MS.gene04645:CDS | 55.0% |
| ! | CTGTCTGAGGGTGTGAGTTC+GGG | + | chr7.3:17160963-17160982 | MS.gene04645:CDS | 55.0% |
| ! | GCTGTCTGAGGGTGTGAGTT+CGG | + | chr7.3:17160962-17160981 | MS.gene04645:CDS | 55.0% |
| ! | TGTCTGAGGGTGTGAGTTCG+GGG | + | chr7.3:17160964-17160983 | MS.gene04645:CDS | 55.0% |
| ! | TTTGCTGTGAGGACCGTGGT+TGG | + | chr7.3:17161390-17161409 | MS.gene04645:CDS | 55.0% |
| !! | AGAGAGGAGGTGGTGGACTA+GGG | - | chr7.3:17160139-17160158 | None:intergenic | 55.0% |
| !! | GAGCGTAACGGAGGGAGTTT+TGG | - | chr7.3:17160212-17160231 | None:intergenic | 55.0% |
| !! | GAGGCGCTGCCAAGTTCTTT+GGG | + | chr7.3:17162024-17162043 | MS.gene04645:CDS | 55.0% |
| !! | GGGGGAGATTTTGAGAGAGG+AGG | - | chr7.3:17160152-17160171 | None:intergenic | 55.0% |
| !! | GGGTGATGGAGGGGGTTAAA+TGG | - | chr7.3:17160251-17160270 | None:intergenic | 55.0% |
| !! | TGAGGCGCTGCCAAGTTCTT+TGG | + | chr7.3:17162023-17162042 | MS.gene04645:CDS | 55.0% |
| !!! | ACGCGGTGGTTTTGGTTACG+GGG | + | chr7.3:17161451-17161470 | MS.gene04645:CDS | 55.0% |
| !!! | GACGCGGTGGTTTTGGTTAC+GGG | + | chr7.3:17161450-17161469 | MS.gene04645:CDS | 55.0% |
| !!! | GGTTTTAAGAGGTGGGGCGA+TGG | + | chr7.3:17161076-17161095 | MS.gene04645:CDS | 55.0% |
| !!! | GTGGGTTTTGGAAGGGGAGT+TGG | + | chr7.3:17161205-17161224 | MS.gene04645:CDS | 55.0% |
| AACGACCATCGGTGGCGAGA+CGG | - | chr7.3:17160308-17160327 | None:intergenic | 60.0% | |
| ACAGGGGCAATGGCAAGACG+CGG | + | chr7.3:17161434-17161453 | MS.gene04645:CDS | 60.0% | |
| CTGGTCTCGAGAGGACAGTG+AGG | - | chr7.3:17162430-17162449 | None:intergenic | 60.0% | |
| GAATGCGGTGAGCGTAACGG+AGG | - | chr7.3:17160221-17160240 | None:intergenic | 60.0% | |
| GGCTTCGGAGGAACGACCAT+CGG | - | chr7.3:17160319-17160338 | None:intergenic | 60.0% | |
| GTCAGCGAAGGAGAGGGCTT+CGG | - | chr7.3:17160334-17160353 | None:intergenic | 60.0% | |
| TTAAGAGGTGGGGCGATGGC+GGG | + | chr7.3:17161080-17161099 | MS.gene04645:CDS | 60.0% | |
| TTCGGAGGAACGACCATCGG+TGG | - | chr7.3:17160316-17160335 | None:intergenic | 60.0% | |
| !! | CGTGTTTGCTGTGAGGACCG+TGG | + | chr7.3:17161386-17161405 | MS.gene04645:CDS | 60.0% |
| !! | GAGAGAGGAGGTGGTGGACT+AGG | - | chr7.3:17160140-17160159 | None:intergenic | 60.0% |
| !! | GGTTTGGCTTGCTGAGCCGA+TGG | + | chr7.3:17161013-17161032 | MS.gene04645:CDS | 60.0% |
| AAACGCCGTCTCGCCACCGA+TGG | + | chr7.3:17160300-17160319 | MS.gene04645:CDS | 65.0% | |
| AGCGAAGGAGAGGGCTTCGG+AGG | - | chr7.3:17160331-17160350 | None:intergenic | 65.0% | |
| GGATGTTGGGACGGTTGGGC+AGG | + | chr7.3:17160851-17160870 | MS.gene04645:CDS | 65.0% | |
| GGTGGCGAGACGGCGTTTGA+TGG | - | chr7.3:17160298-17160317 | None:intergenic | 65.0% | |
| TCGCAGCACGAGCCCAACCA+CGG | - | chr7.3:17161406-17161425 | None:intergenic | 65.0% | |
| GATGGAATCGGCGACGGCGG+CGG | - | chr7.3:17160280-17160299 | None:intergenic | 70.0% | |
| GGGGCAATGGCAAGACGCGG+TGG | + | chr7.3:17161437-17161456 | MS.gene04645:CDS | 70.0% | |
| !! | CGGAGTCGGGGGTGATGGAG+GGG | - | chr7.3:17160260-17160279 | None:intergenic | 70.0% |
| !! | GCGGAGTCGGGGGTGATGGA+GGG | - | chr7.3:17160261-17160280 | None:intergenic | 70.0% |
| !! | GGAGTCGGGGGTGATGGAGG+GGG | - | chr7.3:17160259-17160278 | None:intergenic | 70.0% |
| ATCGGCGACGGCGGCGGAGT+CGG | - | chr7.3:17160274-17160293 | None:intergenic | 75.0% | |
| ! | GGCGGAGTCGGGGGTGATGG+AGG | - | chr7.3:17160262-17160281 | None:intergenic | 75.0% |
| ! | GGCGGCGGAGTCGGGGGTGA+TGG | - | chr7.3:17160265-17160284 | None:intergenic | 80.0% |
| ! | TCGGCGACGGCGGCGGAGTC+GGG | - | chr7.3:17160273-17160292 | None:intergenic | 80.0% |
| ! | CGGCGACGGCGGCGGAGTCG+GGG | - | chr7.3:17160272-17160291 | None:intergenic | 85.0% |
| ! | GGCGACGGCGGCGGAGTCGG+GGG | - | chr7.3:17160271-17160290 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 17160090 | 17162704 | 17160090 | ID=MS.gene04645 |
| chr7.3 | mRNA | 17160090 | 17162704 | 17160090 | ID=MS.gene04645.t1;Parent=MS.gene04645 |
| chr7.3 | exon | 17160090 | 17162326 | 17160090 | ID=MS.gene04645.t1.exon1;Parent=MS.gene04645.t1 |
| chr7.3 | CDS | 17160090 | 17162326 | 17160090 | ID=cds.MS.gene04645.t1;Parent=MS.gene04645.t1 |
| chr7.3 | exon | 17162416 | 17162704 | 17162416 | ID=MS.gene04645.t1.exon2;Parent=MS.gene04645.t1 |
| chr7.3 | CDS | 17162416 | 17162704 | 17162416 | ID=cds.MS.gene04645.t1;Parent=MS.gene04645.t1 |
| Gene Sequence |
| Protein sequence |
