Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066960.t1 | XP_013452656.1 | 98.9 | 354 | 4 | 0 | 1 | 354 | 1 | 354 | 7.90E-198 | 699.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066960.t1 | Q8VXX4 | 83.9 | 354 | 57 | 0 | 1 | 354 | 1 | 354 | 2.1e-175 | 616.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066960.t1 | A0A072UA77 | 98.9 | 354 | 4 | 0 | 1 | 354 | 1 | 354 | 5.7e-198 | 699.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066960.t1 | MTR_6g471010 | 98.870 | 354 | 4 | 0 | 1 | 354 | 1 | 354 | 0.0 | 732 |
MS.gene066960.t1 | MTR_6g027590 | 96.610 | 354 | 12 | 0 | 1 | 354 | 1 | 354 | 0.0 | 721 |
MS.gene066960.t1 | MTR_5g020810 | 36.000 | 350 | 205 | 4 | 2 | 346 | 413 | 748 | 2.89e-75 | 247 |
MS.gene066960.t1 | MTR_3g118160 | 30.319 | 376 | 228 | 8 | 2 | 347 | 421 | 792 | 6.16e-46 | 167 |
MS.gene066960.t1 | MTR_3g088120 | 25.072 | 347 | 217 | 6 | 2 | 341 | 33 | 343 | 1.99e-33 | 127 |
MS.gene066960.t1 | MTR_3g088120 | 28.279 | 244 | 146 | 2 | 2 | 245 | 33 | 247 | 3.34e-33 | 125 |
MS.gene066960.t1 | MTR_3g088380 | 32.218 | 239 | 125 | 4 | 3 | 234 | 11 | 219 | 4.47e-33 | 125 |
MS.gene066960.t1 | MTR_4g102860 | 30.556 | 216 | 118 | 4 | 3 | 217 | 17 | 201 | 1.48e-24 | 102 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066960.t1 | AT5G27740 | 83.898 | 354 | 57 | 0 | 1 | 354 | 1 | 354 | 0.0 | 646 |
MS.gene066960.t1 | AT1G21690 | 33.333 | 234 | 119 | 4 | 3 | 229 | 11 | 214 | 8.58e-33 | 125 |
MS.gene066960.t1 | AT1G21690 | 32.636 | 239 | 124 | 4 | 3 | 234 | 11 | 219 | 1.06e-32 | 125 |
MS.gene066960.t1 | AT1G21690 | 32.051 | 234 | 115 | 4 | 3 | 229 | 11 | 207 | 4.11e-30 | 117 |
MS.gene066960.t1 | AT1G77470 | 27.347 | 245 | 148 | 3 | 3 | 247 | 41 | 255 | 2.24e-29 | 116 |
MS.gene066960.t1 | AT1G21690 | 32.636 | 239 | 112 | 6 | 3 | 234 | 11 | 207 | 2.64e-29 | 115 |
MS.gene066960.t1 | AT1G63160 | 27.126 | 247 | 146 | 6 | 3 | 248 | 17 | 230 | 6.99e-23 | 98.2 |
Find 75 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAAGCGATGCAGGCTTTC+AGG | 0.177682 | 6.4:-47971541 | MS.gene066960:CDS |
CATAACACTGTCGAGGGTTT+TGG | 0.212335 | 6.4:+47973076 | None:intergenic |
AGAAATCAAATCGGAATTTA+AGG | 0.217343 | 6.4:-47969724 | MS.gene066960:CDS |
TGTCCTCATTTGCTGTTCTA+TGG | 0.252413 | 6.4:-47972897 | MS.gene066960:CDS |
TGCTCAAAATCTCAAGAAAT+TGG | 0.257130 | 6.4:-47973039 | MS.gene066960:intron |
TTCAGGTGAAGGTGGAAAAT+AGG | 0.275227 | 6.4:-47972511 | MS.gene066960:intron |
CGGCACCGGGTCCAAACATT+TGG | 0.299333 | 6.4:+47972829 | None:intergenic |
TTTCTTCCCTTTAGTATCAA+TGG | 0.323241 | 6.4:+47971470 | None:intergenic |
AAAGGGAAGAAAGGATTTAA+AGG | 0.324156 | 6.4:-47971459 | MS.gene066960:intron |
GCTCTTCTCCGCCAAATGTT+TGG | 0.325475 | 6.4:-47972840 | MS.gene066960:CDS |
GCTGCAACTTCCTTCTAGTT+TGG | 0.326964 | 6.4:-47969762 | MS.gene066960:CDS |
TTCTTCCCTTTAGTATCAAT+GGG | 0.348124 | 6.4:+47971471 | None:intergenic |
TCAGGTGAAGGTGGAAAATA+GGG | 0.353576 | 6.4:-47972510 | MS.gene066960:intron |
TTATGAGCTATTGAGGAAAC+TGG | 0.357086 | 6.4:-47969108 | MS.gene066960:CDS |
CTATACATTGGCAGCATTTG+TGG | 0.358356 | 6.4:-47968261 | MS.gene066960:intron |
GCAAGTCTCAAATGACAATA+TGG | 0.375769 | 6.4:+47969697 | None:intergenic |
TTGTTCTGCGGAGAGAATGC+TGG | 0.394620 | 6.4:+47971036 | None:intergenic |
TCCTGAAAGCCTGCATCGCT+TGG | 0.402265 | 6.4:+47971540 | None:intergenic |
CTATTTACCTGTTCTTCACT+TGG | 0.411342 | 6.4:+47970909 | None:intergenic |
TATACTCCTCCCAGTCCATT+GGG | 0.413295 | 6.4:+47969519 | None:intergenic |
TGAAGGAACAGAGCCCAAAA+AGG | 0.416911 | 6.4:-47969472 | MS.gene066960:intron |
GACTTCTTTATGAGCTATTG+AGG | 0.419698 | 6.4:-47969115 | MS.gene066960:CDS |
TCAAGAAATAATCAAAGAAA+TGG | 0.433507 | 6.4:-47971505 | MS.gene066960:CDS |
TCCTTCCTCATCGCAACATT+CGG | 0.436381 | 6.4:-47968215 | MS.gene066960:CDS |
CAAAACCCTCGACAGTGTTA+TGG | 0.439317 | 6.4:-47973075 | MS.gene066960:CDS |
TAATGCACCAAGTGAAGAAC+AGG | 0.440498 | 6.4:-47970916 | MS.gene066960:intron |
GTTTGGACCCGGTGCCGAAA+AGG | 0.441219 | 6.4:-47972823 | MS.gene066960:intron |
CAGTTCATTGGTAAGAAAGA+AGG | 0.442426 | 6.4:-47969785 | MS.gene066960:CDS |
TTGCTGTTCTATGGTCCATC+AGG | 0.446874 | 6.4:-47972888 | MS.gene066960:CDS |
GGAAAATAGGGCTTGGAAAG+TGG | 0.454758 | 6.4:-47972498 | MS.gene066960:CDS |
ATGCGAGCAGCCAAACTAGA+AGG | 0.460248 | 6.4:+47969752 | None:intergenic |
AATTCGCACATTAAGACAAC+GGG | 0.461988 | 6.4:+47970938 | None:intergenic |
TTTAGGTTGTTTCAAGTTCG+AGG | 0.467965 | 6.4:-47969282 | MS.gene066960:intron |
AATAGACCCATTGATACTAA+AGG | 0.470695 | 6.4:-47971477 | MS.gene066960:CDS |
ATAGACCCATTGATACTAAA+GGG | 0.485089 | 6.4:-47971476 | MS.gene066960:CDS |
ATTGATACTAAAGGGAAGAA+AGG | 0.491720 | 6.4:-47971468 | MS.gene066960:CDS |
CTCCGCCAAATGTTTGGACC+CGG | 0.492853 | 6.4:-47972834 | MS.gene066960:CDS |
ATATACTCCTCCCAGTCCAT+TGG | 0.499233 | 6.4:+47969518 | None:intergenic |
ATTGTTTGCTTGTCGGTGAA+AGG | 0.508946 | 6.4:+47969545 | None:intergenic |
TAAAGAGAGCAAAGATGTTG+TGG | 0.510082 | 6.4:-47973115 | None:intergenic |
AAAGAGAGCAAAGATGTTGT+GGG | 0.510264 | 6.4:-47973114 | None:intergenic |
GCTGACCAATTGCATTCCTC+CGG | 0.512269 | 6.4:-47969244 | MS.gene066960:CDS |
TGAAGGTGGAAAATAGGGCT+TGG | 0.512888 | 6.4:-47972505 | MS.gene066960:CDS |
AGGCAAGAAAACACTAATCA+TGG | 0.515883 | 6.4:-47972862 | MS.gene066960:CDS |
GATCTCCGGAGGAATGCAAT+TGG | 0.520414 | 6.4:+47969239 | None:intergenic |
TTTACCTTCAAAATGATCTC+CGG | 0.522303 | 6.4:+47969225 | None:intergenic |
TGAAGCATGAAATCTGCCAT+TGG | 0.524375 | 6.4:-47969076 | MS.gene066960:CDS |
AGTTCATTGGTAAGAAAGAA+GGG | 0.531136 | 6.4:-47969784 | MS.gene066960:CDS |
TGTTCTGCGGAGAGAATGCT+GGG | 0.531450 | 6.4:+47971037 | None:intergenic |
GAAGCATGAAATCTGCCATT+GGG | 0.532158 | 6.4:-47969075 | MS.gene066960:CDS |
GCACATTAAGACAACGGGAG+CGG | 0.533938 | 6.4:+47970943 | None:intergenic |
CACCGGGTCCAAACATTTGG+CGG | 0.535929 | 6.4:+47972832 | None:intergenic |
CAGGAGCATAGGATGCGCCT+TGG | 0.541208 | 6.4:-47968802 | MS.gene066960:CDS |
CCTCATTTAACCAGGAGCAT+AGG | 0.541849 | 6.4:-47968813 | MS.gene066960:intron |
GAAATGACTCCAAGCGATGC+AGG | 0.543849 | 6.4:-47971549 | MS.gene066960:CDS |
TTCTATGGTCCATCAGGCGC+AGG | 0.544328 | 6.4:-47972882 | MS.gene066960:CDS |
AATTGCATCTGACATAATGA+AGG | 0.551340 | 6.4:-47969489 | MS.gene066960:CDS |
GCATTCTCTCCGCAGAACAA+TGG | 0.564370 | 6.4:-47971033 | MS.gene066960:CDS |
CGCTTGGAGTCATTTCGATG+TGG | 0.565712 | 6.4:+47971556 | None:intergenic |
GGACCATAGAACAGCAAATG+AGG | 0.571639 | 6.4:+47972894 | None:intergenic |
GCATAGCAGAGAAATCAAAT+CGG | 0.583422 | 6.4:-47969733 | MS.gene066960:CDS |
AATCAAATCGGAATTTAAGG+AGG | 0.587176 | 6.4:-47969721 | MS.gene066960:CDS |
TGTATTTCTCCATTGTTCTG+CGG | 0.594797 | 6.4:+47971024 | None:intergenic |
GTTGATGTTTCAGGTGAAGG+TGG | 0.620590 | 6.4:-47972519 | MS.gene066960:intron |
GTGAACCATAACACTGTCGA+GGG | 0.625900 | 6.4:+47973070 | None:intergenic |
ACCTTCAAAATGATCTCCGG+AGG | 0.628271 | 6.4:+47969228 | None:intergenic |
ATCAAATCGGAATTTAAGGA+GGG | 0.630327 | 6.4:-47969720 | MS.gene066960:CDS |
GCCGAATGTTGCGATGAGGA+AGG | 0.630554 | 6.4:+47968214 | None:intergenic |
TTACATAATATGCTGCCCAA+TGG | 0.630713 | 6.4:+47969060 | None:intergenic |
TACTCCTCCCAGTCCATTGG+GGG | 0.645004 | 6.4:+47969521 | None:intergenic |
ATACTCCTCCCAGTCCATTG+GGG | 0.647707 | 6.4:+47969520 | None:intergenic |
TAATTCGCACATTAAGACAA+CGG | 0.648193 | 6.4:+47970937 | None:intergenic |
TGTGAACCATAACACTGTCG+AGG | 0.649165 | 6.4:+47973069 | None:intergenic |
TTCAGCCGAATGTTGCGATG+AGG | 0.657182 | 6.4:+47968210 | None:intergenic |
GTGGAGATTACTGTTGGACA+CGG | 0.686923 | 6.4:+47969675 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTTTATTTTCTATACAT+TGG | - | chr6.4:47973039-47973058 | MS.gene066960:intron | 10.0% |
!!! | TATTTTAAGATAATAAAAGA+AGG | - | chr6.4:47969914-47969933 | MS.gene066960:intron | 10.0% |
!! | ATAATATGCTATTATACTTT+AGG | - | chr6.4:47972013-47972032 | MS.gene066960:intron | 15.0% |
!! | TGAAAAATAAGAAGTAAAAA+TGG | + | chr6.4:47972451-47972470 | None:intergenic | 15.0% |
!!! | AAAAGTTTCAAATTTTTGTT+TGG | - | chr6.4:47968358-47968377 | MS.gene066960:intron | 15.0% |
!! | ATATATTGATATGTAAGTCT+TGG | - | chr6.4:47972990-47973009 | MS.gene066960:intron | 20.0% |
!! | GATCATCTTTATTGAATATT+TGG | - | chr6.4:47971474-47971493 | MS.gene066960:CDS | 20.0% |
!! | TATATTGATATGTAAGTCTT+GGG | - | chr6.4:47972991-47973010 | MS.gene066960:intron | 20.0% |
!! | TCAAGAAATAATCAAAGAAA+TGG | - | chr6.4:47969807-47969826 | MS.gene066960:intron | 20.0% |
!! | TGGTTTCAGAATAATTATAA+AGG | + | chr6.4:47969369-47969388 | None:intergenic | 20.0% |
!! | TGTAAGAATAAATAGGAAAA+AGG | - | chr6.4:47969223-47969242 | MS.gene066960:intron | 20.0% |
!! | TTCAAAACATGAAAACTATA+AGG | - | chr6.4:47970780-47970799 | MS.gene066960:intron | 20.0% |
!! | TTGATAGATTAAACATGTTA+GGG | - | chr6.4:47972787-47972806 | MS.gene066960:intron | 20.0% |
!! | TTGTTGCAAAGTTTATTTAA+CGG | - | chr6.4:47968880-47968899 | MS.gene066960:intron | 20.0% |
!! | TTTGATAGATTAAACATGTT+AGG | - | chr6.4:47972786-47972805 | MS.gene066960:intron | 20.0% |
!! | TTTGTAAGTAAATCATAGTA+TGG | + | chr6.4:47972752-47972771 | None:intergenic | 20.0% |
!!! | ACTTCTTATTTTTCAAAGTA+AGG | - | chr6.4:47972456-47972475 | MS.gene066960:intron | 20.0% |
!!! | CATCTAACTAAAATTACTTT+TGG | + | chr6.4:47968634-47968653 | None:intergenic | 20.0% |
!!! | CTACTTATTTTCATTTACTT+TGG | + | chr6.4:47972696-47972715 | None:intergenic | 20.0% |
!!! | CTAGAAAAGCATTTTATAAT+CGG | + | chr6.4:47971266-47971285 | None:intergenic | 20.0% |
!!! | GTATTCTTTATAATTTGCAA+TGG | + | chr6.4:47972627-47972646 | None:intergenic | 20.0% |
!!! | GTTCTTAAATTTTGATGTTT+TGG | + | chr6.4:47970830-47970849 | None:intergenic | 20.0% |
!!! | TCTAGAGTAAAAAAAATAGA+GGG | + | chr6.4:47972934-47972953 | None:intergenic | 20.0% |
!!! | TCTGAATTTTGAAAGAATTT+TGG | - | chr6.4:47968574-47968593 | MS.gene066960:intron | 20.0% |
!!! | TGTTGTTTGTAAGAATAAAT+AGG | - | chr6.4:47969216-47969235 | MS.gene066960:intron | 20.0% |
!!! | TTCTAAAAAAAAGACCTTTT+CGG | + | chr6.4:47968506-47968525 | None:intergenic | 20.0% |
!!! | TTCTAGAGTAAAAAAAATAG+AGG | + | chr6.4:47972935-47972954 | None:intergenic | 20.0% |
!!! | TTGATTGATTCAAATACAAA+AGG | + | chr6.4:47968318-47968337 | None:intergenic | 20.0% |
!!! | TTTTGTAAAAAACAAATCAG+TGG | + | chr6.4:47969068-47969087 | None:intergenic | 20.0% |
! | AAAACTATAAGGAAACCATA+CGG | - | chr6.4:47970706-47970725 | MS.gene066960:intron | 25.0% |
! | AAAATGCAGATTAAGAAACT+TGG | - | chr6.4:47971223-47971242 | MS.gene066960:intron | 25.0% |
! | AAACATCAAAATTCAAGAAC+TGG | - | chr6.4:47970745-47970764 | MS.gene066960:intron | 25.0% |
! | AATAAAAGAAGGAATCTTCA+TGG | - | chr6.4:47969925-47969944 | MS.gene066960:intron | 25.0% |
! | ACATAATATTGGAATTTCCA+AGG | + | chr6.4:47969600-47969619 | None:intergenic | 25.0% |
! | ACTCTTCTCTATCAATATAT+TGG | + | chr6.4:47969010-47969029 | None:intergenic | 25.0% |
! | AGAAATCAAATCGGAATTTA+AGG | - | chr6.4:47971588-47971607 | MS.gene066960:CDS | 25.0% |
! | AGTGGTCAATAATAATATTC+AGG | + | chr6.4:47968972-47968991 | None:intergenic | 25.0% |
! | ATACTTATGAAATGTGGAAT+TGG | - | chr6.4:47969464-47969483 | MS.gene066960:intron | 25.0% |
! | ATTTCAGTAAACATTGCTAT+AGG | - | chr6.4:47969101-47969120 | MS.gene066960:CDS | 25.0% |
! | CGTATTATACTTATGAAATG+TGG | - | chr6.4:47969458-47969477 | MS.gene066960:intron | 25.0% |
! | CTCAAATCATGAAAACTATA+AGG | - | chr6.4:47970695-47970714 | MS.gene066960:intron | 25.0% |
! | GGAAAAAAATTCCAAAACAT+AGG | + | chr6.4:47970474-47970493 | None:intergenic | 25.0% |
! | GGACAAATATTACAAATGTT+GGG | - | chr6.4:47972817-47972836 | MS.gene066960:intron | 25.0% |
! | GTAAGTGCATTATCAAATTA+TGG | - | chr6.4:47972271-47972290 | MS.gene066960:intron | 25.0% |
! | TACTTATGAAATGTGGAATT+GGG | - | chr6.4:47969465-47969484 | MS.gene066960:intron | 25.0% |
! | TCAACAAAGACAATTTAGAA+TGG | + | chr6.4:47968778-47968797 | None:intergenic | 25.0% |
! | TGAAATGAGTGACAAAAAAA+GGG | + | chr6.4:47968529-47968548 | None:intergenic | 25.0% |
! | TGGACAAATATTACAAATGT+TGG | - | chr6.4:47972816-47972835 | MS.gene066960:intron | 25.0% |
!! | ATCTGAATGTTTGAAATAGT+TGG | - | chr6.4:47972567-47972586 | MS.gene066960:intron | 25.0% |
!! | CATTAACTAGTCTAATATCA+AGG | + | chr6.4:47972410-47972429 | None:intergenic | 25.0% |
!! | CTTGATATTAGACTAGTTAA+TGG | - | chr6.4:47972408-47972427 | MS.gene066960:intron | 25.0% |
!! | TATAGCTATTGCTTTATTCA+AGG | - | chr6.4:47972960-47972979 | MS.gene066960:intron | 25.0% |
!! | TATCAAAAGCAAACCTTTTT+GGG | + | chr6.4:47971856-47971875 | None:intergenic | 25.0% |
!! | TCTGAATGTTTGAAATAGTT+GGG | - | chr6.4:47972568-47972587 | MS.gene066960:intron | 25.0% |
!!! | GTTCTTGAATTTTGATGTTT+TGG | + | chr6.4:47970745-47970764 | None:intergenic | 25.0% |
!!! | GTTTATTTTTTCTGAGTAGA+AGG | + | chr6.4:47969535-47969554 | None:intergenic | 25.0% |
!!! | TGTATCTTTGAGTTTTTGAT+TGG | - | chr6.4:47968688-47968707 | MS.gene066960:intron | 25.0% |
AAACTATAAGGAAACCATAC+GGG | - | chr6.4:47970707-47970726 | MS.gene066960:intron | 30.0% | |
AAAGGGAAGAAAGGATTTAA+AGG | - | chr6.4:47969853-47969872 | MS.gene066960:intron | 30.0% | |
AAATGCAGTGCACATAATAT+TGG | + | chr6.4:47969611-47969630 | None:intergenic | 30.0% | |
AACAGATTCCATTATTTCCT+TGG | + | chr6.4:47970450-47970469 | None:intergenic | 30.0% | |
AAGCACTCTAACATTTGTAT+AGG | - | chr6.4:47968903-47968922 | MS.gene066960:intron | 30.0% | |
AAGGAATCTTACATAGGATT+GGG | + | chr6.4:47970971-47970990 | None:intergenic | 30.0% | |
AATAGACCCATTGATACTAA+AGG | - | chr6.4:47969835-47969854 | MS.gene066960:intron | 30.0% | |
AATATCATTGTCTTGATCCT+TGG | - | chr6.4:47969580-47969599 | MS.gene066960:intron | 30.0% | |
AATCAAATCGGAATTTAAGG+AGG | - | chr6.4:47971591-47971610 | MS.gene066960:CDS | 30.0% | |
AATTGCATCTGACATAATGA+AGG | - | chr6.4:47971823-47971842 | MS.gene066960:intron | 30.0% | |
ACACAAGGATTGTATTCTTA+GGG | + | chr6.4:47968606-47968625 | None:intergenic | 30.0% | |
ACATGCTTCCAATTTAATCT+GGG | - | chr6.4:47971658-47971677 | MS.gene066960:intron | 30.0% | |
AGAAAGGATTTAAAGGTAAC+CGG | - | chr6.4:47969860-47969879 | MS.gene066960:intron | 30.0% | |
AGCATAGAAAATGCAAATTC+AGG | - | chr6.4:47972871-47972890 | MS.gene066960:CDS | 30.0% | |
AGTTCATTGGTAAGAAAGAA+GGG | - | chr6.4:47971528-47971547 | MS.gene066960:CDS | 30.0% | |
AGTTGACAAAACAATCAAGT+AGG | + | chr6.4:47971949-47971968 | None:intergenic | 30.0% | |
AGTTTAACAACAAAAACAGC+CGG | + | chr6.4:47969882-47969901 | None:intergenic | 30.0% | |
ATAGAACAACATTCATCTAC+TGG | + | chr6.4:47970605-47970624 | None:intergenic | 30.0% | |
ATAGACCCATTGATACTAAA+GGG | - | chr6.4:47969836-47969855 | MS.gene066960:intron | 30.0% | |
ATCAAATCGGAATTTAAGGA+GGG | - | chr6.4:47971592-47971611 | MS.gene066960:CDS | 30.0% | |
ATCAACATTCTTAGGAGAAA+TGG | + | chr6.4:47971033-47971052 | None:intergenic | 30.0% | |
ATCAGCAAGCAAATATTGTA+TGG | + | chr6.4:47973018-47973037 | None:intergenic | 30.0% | |
ATTAAGAAACTTGGAAAGGA+AGG | - | chr6.4:47971232-47971251 | MS.gene066960:intron | 30.0% | |
ATTGATACTAAAGGGAAGAA+AGG | - | chr6.4:47969844-47969863 | MS.gene066960:intron | 30.0% | |
ATTGTCTTTGTTGATGTTTC+AGG | - | chr6.4:47968784-47968803 | MS.gene066960:CDS | 30.0% | |
CAAATTAAGGATGCAATTGA+TGG | + | chr6.4:47972651-47972670 | None:intergenic | 30.0% | |
CAATATTAAGCATGTTCTCT+GGG | + | chr6.4:47970945-47970964 | None:intergenic | 30.0% | |
CTCTAACATTTGTATAGGTT+AGG | - | chr6.4:47968908-47968927 | MS.gene066960:intron | 30.0% | |
GCAACAAAACAGAAAGAAAA+GGG | + | chr6.4:47968867-47968886 | None:intergenic | 30.0% | |
GCATAGAAAATGCAAATTCA+GGG | - | chr6.4:47972872-47972891 | MS.gene066960:CDS | 30.0% | |
GTGAAATGAGTGACAAAAAA+AGG | + | chr6.4:47968530-47968549 | None:intergenic | 30.0% | |
TAAGGAATCTTACATAGGAT+TGG | + | chr6.4:47970972-47970991 | None:intergenic | 30.0% | |
TAATTCGCACATTAAGACAA+CGG | + | chr6.4:47970378-47970397 | None:intergenic | 30.0% | |
TAGATGAATGTTGTTCTATG+AGG | - | chr6.4:47970606-47970625 | MS.gene066960:intron | 30.0% | |
TATAAGTCCATGCTTCATAA+GGG | - | chr6.4:47970662-47970681 | MS.gene066960:intron | 30.0% | |
TCAATATTAAGCATGTTCTC+TGG | + | chr6.4:47970946-47970965 | None:intergenic | 30.0% | |
TGAAATAATTCCGAAATGCA+TGG | - | chr6.4:47971150-47971169 | MS.gene066960:intron | 30.0% | |
TGAATATTTGGAAATCCATG+TGG | - | chr6.4:47971486-47971505 | MS.gene066960:CDS | 30.0% | |
TGACTGTGTATAATGATGTT+TGG | - | chr6.4:47970023-47970042 | MS.gene066960:intron | 30.0% | |
TGATATTACTTTCTGCGATT+TGG | - | chr6.4:47971302-47971321 | MS.gene066960:intron | 30.0% | |
TGCAACAAAACAGAAAGAAA+AGG | + | chr6.4:47968868-47968887 | None:intergenic | 30.0% | |
TGCTCAAAATCTCAAGAAAT+TGG | - | chr6.4:47968273-47968292 | MS.gene066960:intron | 30.0% | |
TTAACATCCAACTTATAGAG+TGG | + | chr6.4:47971401-47971420 | None:intergenic | 30.0% | |
TTATGCATCCCAGATTAAAT+TGG | + | chr6.4:47971669-47971688 | None:intergenic | 30.0% | |
TTCTTCCCTTTAGTATCAAT+GGG | + | chr6.4:47969844-47969863 | None:intergenic | 30.0% | |
TTGGGTAAAACATATACAGA+AGG | + | chr6.4:47972352-47972371 | None:intergenic | 30.0% | |
TTTACCTGTGTAATGCTTTA+AGG | - | chr6.4:47970061-47970080 | MS.gene066960:intron | 30.0% | |
TTTACCTTCAAAATGATCTC+CGG | + | chr6.4:47972090-47972109 | None:intergenic | 30.0% | |
TTTCTTCCCTTTAGTATCAA+TGG | + | chr6.4:47969845-47969864 | None:intergenic | 30.0% | |
! | AAAGCAATTTTTCACATCGA+AGG | - | chr6.4:47972537-47972556 | MS.gene066960:intron | 30.0% |
! | AAGAAAAGGGAAGTATGAAA+AGG | + | chr6.4:47968854-47968873 | None:intergenic | 30.0% |
! | AGTAGAATGTCTTGTTAACT+TGG | + | chr6.4:47970909-47970928 | None:intergenic | 30.0% |
! | AGTTTTCATGATTTGAGCTT+AGG | + | chr6.4:47970692-47970711 | None:intergenic | 30.0% |
! | ATTTACTTTGGAGACAAACT+AGG | + | chr6.4:47972684-47972703 | None:intergenic | 30.0% |
! | CCTAAGAATGTTGATTATGA+CGG | - | chr6.4:47971038-47971057 | MS.gene066960:CDS | 30.0% |
! | CTTCTCAAAGCTTTTCTTTA+AGG | - | chr6.4:47971705-47971724 | MS.gene066960:intron | 30.0% |
! | GTAGAATGTCTTGTTAACTT+GGG | + | chr6.4:47970908-47970927 | None:intergenic | 30.0% |
! | GTATCAAAAGCAAACCTTTT+TGG | + | chr6.4:47971857-47971876 | None:intergenic | 30.0% |
! | GTTGAAGTTTTACAGTTCAT+TGG | - | chr6.4:47971515-47971534 | MS.gene066960:CDS | 30.0% |
! | TGAATCATTGGTGTCTTATT+TGG | - | chr6.4:47969642-47969661 | MS.gene066960:intron | 30.0% |
! | TGCTTTTCTAGATATACTGA+AGG | - | chr6.4:47971275-47971294 | MS.gene066960:intron | 30.0% |
! | TTCTAAGGATTATATCTGCT+TGG | - | chr6.4:47971335-47971354 | MS.gene066960:intron | 30.0% |
!! | AAGACATTCTACTGACTTAT+TGG | - | chr6.4:47970916-47970935 | MS.gene066960:intron | 30.0% |
!! | AAGCTTTTCTTTAAGGAAGA+AGG | - | chr6.4:47971712-47971731 | MS.gene066960:intron | 30.0% |
AAACATTGCTATAGGATGAG+AGG | - | chr6.4:47969109-47969128 | MS.gene066960:CDS | 35.0% | |
AAACTGATACCAAACAGTTC+TGG | + | chr6.4:47969434-47969453 | None:intergenic | 35.0% | |
AAATTCAGGGACAAAAATGG+TGG | - | chr6.4:47972885-47972904 | MS.gene066960:CDS | 35.0% | |
AAGATGTAGAACAAAGACAC+AGG | + | chr6.4:47969342-47969361 | None:intergenic | 35.0% | |
AATTCGCACATTAAGACAAC+GGG | + | chr6.4:47970377-47970396 | None:intergenic | 35.0% | |
ACAACCACTCAATAACTTCT+AGG | + | chr6.4:47969266-47969285 | None:intergenic | 35.0% | |
AGAAGTTATTGAGTGGTTGT+TGG | - | chr6.4:47969266-47969285 | MS.gene066960:CDS | 35.0% | |
AGACATTGCTCACTAACTAA+GGG | + | chr6.4:47968948-47968967 | None:intergenic | 35.0% | |
AGCATTTCCACTCTATAAGT+TGG | - | chr6.4:47971391-47971410 | MS.gene066960:intron | 35.0% | |
AGGAATCTTACATAGGATTG+GGG | + | chr6.4:47970970-47970989 | None:intergenic | 35.0% | |
AGGAGAGAATGTGCAAATTA+AGG | + | chr6.4:47972664-47972683 | None:intergenic | 35.0% | |
AGGCAAGAAAACACTAATCA+TGG | - | chr6.4:47968450-47968469 | MS.gene066960:intron | 35.0% | |
AGTCTAATATCAAGGCAATG+AGG | + | chr6.4:47972402-47972421 | None:intergenic | 35.0% | |
ATGAATGTTGTTCTATGAGG+TGG | - | chr6.4:47970609-47970628 | MS.gene066960:intron | 35.0% | |
ATTCTTAGGAGAAATGGTCT+TGG | + | chr6.4:47971027-47971046 | None:intergenic | 35.0% | |
CACACAAGGATTGTATTCTT+AGG | + | chr6.4:47968607-47968626 | None:intergenic | 35.0% | |
CACATGCTTCCAATTTAATC+TGG | - | chr6.4:47971657-47971676 | MS.gene066960:intron | 35.0% | |
CAGTTCATTGGTAAGAAAGA+AGG | - | chr6.4:47971527-47971546 | MS.gene066960:CDS | 35.0% | |
CCGTCATAATCAACATTCTT+AGG | + | chr6.4:47971041-47971060 | None:intergenic | 35.0% | |
CCTCAATGCTAAAAAACAAG+GGG | + | chr6.4:47970495-47970514 | None:intergenic | 35.0% | |
CTATTTACCTGTTCTTCACT+TGG | + | chr6.4:47970406-47970425 | None:intergenic | 35.0% | |
GAAAAATTGCTTTCTGTCCA+AGG | + | chr6.4:47972530-47972549 | None:intergenic | 35.0% | |
GAACTATTTCCAGAACTGTT+TGG | - | chr6.4:47969422-47969441 | MS.gene066960:intron | 35.0% | |
GAAGTTATTGAGTGGTTGTT+GGG | - | chr6.4:47969267-47969286 | MS.gene066960:CDS | 35.0% | |
GCAAGTCTCAAATGACAATA+TGG | + | chr6.4:47971618-47971637 | None:intergenic | 35.0% | |
GCACATAAGGAATCTTACAT+AGG | + | chr6.4:47970977-47970996 | None:intergenic | 35.0% | |
GCAGATTAAGAAACTTGGAA+AGG | - | chr6.4:47971228-47971247 | MS.gene066960:intron | 35.0% | |
GCATAGCAGAGAAATCAAAT+CGG | - | chr6.4:47971579-47971598 | MS.gene066960:CDS | 35.0% | |
GCCTCAATGCTAAAAAACAA+GGG | + | chr6.4:47970496-47970515 | None:intergenic | 35.0% | |
GGAAAAAGGCAAGTCATAAT+TGG | - | chr6.4:47969237-47969256 | MS.gene066960:CDS | 35.0% | |
GTATAAGTCCATGCTTCATA+AGG | - | chr6.4:47970661-47970680 | MS.gene066960:intron | 35.0% | |
GTGTATAATGATGTTTGGTC+TGG | - | chr6.4:47970028-47970047 | MS.gene066960:intron | 35.0% | |
TAAACATGTTAGGGACTAAC+TGG | - | chr6.4:47972796-47972815 | MS.gene066960:intron | 35.0% | |
TGACAAAACAATCAAGTAGG+CGG | + | chr6.4:47971946-47971965 | None:intergenic | 35.0% | |
TGCAAATTCAGGGACAAAAA+TGG | - | chr6.4:47972882-47972901 | MS.gene066960:CDS | 35.0% | |
TGCAAGAACACACAATACAA+TGG | + | chr6.4:47969389-47969408 | None:intergenic | 35.0% | |
TGCCTCAATGCTAAAAAACA+AGG | + | chr6.4:47970497-47970516 | None:intergenic | 35.0% | |
TGGAACTGTTTGACAATAAG+TGG | + | chr6.4:47968990-47969009 | None:intergenic | 35.0% | |
TGTAGTGTCCAAGGAAATAA+TGG | - | chr6.4:47970439-47970458 | MS.gene066960:intron | 35.0% | |
TGTATTTCTCCATTGTTCTG+CGG | + | chr6.4:47970291-47970310 | None:intergenic | 35.0% | |
TGTGTGTTCTTGCAATATTC+TGG | - | chr6.4:47969395-47969414 | MS.gene066960:intron | 35.0% | |
TTACATAATATGCTGCCCAA+TGG | + | chr6.4:47972255-47972274 | None:intergenic | 35.0% | |
TTCTCTGTGAACTGAATCAT+TGG | - | chr6.4:47969630-47969649 | MS.gene066960:intron | 35.0% | |
TTTGCAACTGTTCTGACTAT+AGG | - | chr6.4:47969490-47969509 | MS.gene066960:CDS | 35.0% | |
TTTGGTCAAGTTCTCTTCTA+AGG | - | chr6.4:47971320-47971339 | MS.gene066960:intron | 35.0% | |
! | AATAATGCCCAACATTGACT+TGG | + | chr6.4:47971184-47971203 | None:intergenic | 35.0% |
! | ATTGAGGCAATTGTTTTCTC+TGG | - | chr6.4:47970508-47970527 | MS.gene066960:intron | 35.0% |
! | CAGATTAAATTGGAAGCATG+TGG | + | chr6.4:47971659-47971678 | None:intergenic | 35.0% |
! | GGAATCTGTTTCCTATGTTT+TGG | - | chr6.4:47970460-47970479 | MS.gene066960:intron | 35.0% |
! | TTTGTTGATGTTTCAGGTGA+AGG | - | chr6.4:47968790-47968809 | MS.gene066960:CDS | 35.0% |
!! | GTGGTAAGTTGATATCGATA+AGG | + | chr6.4:47969049-47969068 | None:intergenic | 35.0% |
!! | TTTAGGTTGTTTCAAGTTCG+AGG | - | chr6.4:47972030-47972049 | MS.gene066960:intron | 35.0% |
!!! | AGTAGAAGGCATTCATTTTG+AGG | + | chr6.4:47969521-47969540 | None:intergenic | 35.0% |
!!! | CTGCATTTTTTAGTATGTCC+TGG | + | chr6.4:47971212-47971231 | None:intergenic | 35.0% |
AACTTCAACAATCTGCCACA+TGG | + | chr6.4:47971504-47971523 | None:intergenic | 40.0% | |
AAGCATGTGGAGATTACTGT+TGG | + | chr6.4:47971646-47971665 | None:intergenic | 40.0% | |
AATAAGAAACCTCTCCACCT+TGG | - | chr6.4:47970108-47970127 | MS.gene066960:intron | 40.0% | |
AGAAACTTGGAAAGGAAGGT+TGG | - | chr6.4:47971236-47971255 | MS.gene066960:intron | 40.0% | |
AGAACCAAGCTCTCAAATCT+TGG | - | chr6.4:47969304-47969323 | MS.gene066960:intron | 40.0% | |
AGAATCCACCAAGTCAATGT+TGG | - | chr6.4:47971173-47971192 | MS.gene066960:intron | 40.0% | |
AGTATCTTCTGCATGAACTC+AGG | - | chr6.4:47972326-47972345 | MS.gene066960:intron | 40.0% | |
ATTGCTATAGGATGAGAGGT+AGG | - | chr6.4:47969113-47969132 | MS.gene066960:CDS | 40.0% | |
ATTGTTTGCTTGTCGGTGAA+AGG | + | chr6.4:47971770-47971789 | None:intergenic | 40.0% | |
CAGACATTGCTCACTAACTA+AGG | + | chr6.4:47968949-47968968 | None:intergenic | 40.0% | |
CGGAATTATTTCAGCCTATG+AGG | + | chr6.4:47971143-47971162 | None:intergenic | 40.0% | |
CTATACATTGGCAGCATTTG+TGG | - | chr6.4:47973051-47973070 | MS.gene066960:CDS | 40.0% | |
CTATGCTCCTGGTTAAATGA+GGG | + | chr6.4:47972501-47972520 | None:intergenic | 40.0% | |
GAAACTTGGAAAGGAAGGTT+GGG | - | chr6.4:47971237-47971256 | MS.gene066960:intron | 40.0% | |
GAAGCATGAAATCTGCCATT+GGG | - | chr6.4:47972237-47972256 | MS.gene066960:intron | 40.0% | |
GAATCCACCAAGTCAATGTT+GGG | - | chr6.4:47971174-47971193 | MS.gene066960:intron | 40.0% | |
GCAAGAAGTAACAGTAGTTC+TGG | + | chr6.4:47968740-47968759 | None:intergenic | 40.0% | |
GGAATCTTACATAGGATTGG+GGG | + | chr6.4:47970969-47970988 | None:intergenic | 40.0% | |
GGCGGTTATAAAAACTGACA+AGG | + | chr6.4:47971928-47971947 | None:intergenic | 40.0% | |
GTGTTCTTGCAATATTCTGG+CGG | - | chr6.4:47969398-47969417 | MS.gene066960:intron | 40.0% | |
GTTGCCTAGAAGTTATTGAG+TGG | - | chr6.4:47969259-47969278 | MS.gene066960:CDS | 40.0% | |
TAATGCACCAAGTGAAGAAC+AGG | - | chr6.4:47970396-47970415 | MS.gene066960:intron | 40.0% | |
TAGAACAAAGACACAGGACA+TGG | + | chr6.4:47969336-47969355 | None:intergenic | 40.0% | |
TATGCTCCTGGTTAAATGAG+GGG | + | chr6.4:47972500-47972519 | None:intergenic | 40.0% | |
TCAGGTGAAGGTGGAAAATA+GGG | - | chr6.4:47968802-47968821 | MS.gene066960:CDS | 40.0% | |
TCTTCATGGTCAACAAACAG+TGG | - | chr6.4:47969939-47969958 | MS.gene066960:intron | 40.0% | |
TGAAGCATGAAATCTGCCAT+TGG | - | chr6.4:47972236-47972255 | MS.gene066960:intron | 40.0% | |
TTATTGAGTGGTTGTTGGGT+GGG | - | chr6.4:47969271-47969290 | MS.gene066960:CDS | 40.0% | |
TTCAGGTGAAGGTGGAAAAT+AGG | - | chr6.4:47968801-47968820 | MS.gene066960:CDS | 40.0% | |
TTCTTTCCCCTCATTTAACC+AGG | - | chr6.4:47972491-47972510 | MS.gene066960:intron | 40.0% | |
! | AAAAAAGACCTTTTCGGCAC+CGG | + | chr6.4:47968500-47968519 | None:intergenic | 40.0% |
! | AGAGCCTTAAAGCATTACAC+AGG | + | chr6.4:47970068-47970087 | None:intergenic | 40.0% |
! | AGGCAATTGTTTTCTCTGGT+AGG | - | chr6.4:47970512-47970531 | MS.gene066960:intron | 40.0% |
! | ATAACACTGTCGAGGGTTTT+GGG | + | chr6.4:47968238-47968257 | None:intergenic | 40.0% |
! | GAAGTTTTCTGTAGTGTCCA+AGG | - | chr6.4:47970430-47970449 | MS.gene066960:intron | 40.0% |
! | GGCAATTGTTTTCTCTGGTA+GGG | - | chr6.4:47970513-47970532 | MS.gene066960:intron | 40.0% |
! | TTACCCAATTTGATAGCTCG+CGG | - | chr6.4:47972364-47972383 | MS.gene066960:intron | 40.0% |
!! | AAACTGACTCTGGTCAGTTT+TGG | + | chr6.4:47969148-47969167 | None:intergenic | 40.0% |
!! | ACAGCTCATGTGTTACTTGT+AGG | - | chr6.4:47971741-47971760 | MS.gene066960:intron | 40.0% |
!! | AGTACTTGAGCACTGTTTTC+AGG | - | chr6.4:47969684-47969703 | MS.gene066960:intron | 40.0% |
!! | ATGGTCTTGGAAGTGCTAAA+AGG | + | chr6.4:47971014-47971033 | None:intergenic | 40.0% |
!! | TGTCCTCATTTGCTGTTCTA+TGG | - | chr6.4:47968415-47968434 | MS.gene066960:intron | 40.0% |
!!! | CCCCTTGTTTTTTAGCATTG+AGG | - | chr6.4:47970492-47970511 | MS.gene066960:intron | 40.0% |
!!! | TTACTTTTGGTGCTCACACA+AGG | + | chr6.4:47968621-47968640 | None:intergenic | 40.0% |
AAACAATTCCCCCAATGGAC+TGG | - | chr6.4:47971783-47971802 | MS.gene066960:intron | 45.0% | |
AAGTCCATGCTTCATAAGGG+AGG | - | chr6.4:47970665-47970684 | MS.gene066960:intron | 45.0% | |
ACCTTCAAAATGATCTCCGG+AGG | + | chr6.4:47972087-47972106 | None:intergenic | 45.0% | |
AGAAGGTCTACCCTTGGTTA+GGG | + | chr6.4:47971102-47971121 | None:intergenic | 45.0% | |
AGTAATACTGCAAGCCAAGG+TGG | + | chr6.4:47970125-47970144 | None:intergenic | 45.0% | |
AGTCCATGCTTCATAAGGGA+GGG | - | chr6.4:47970666-47970685 | MS.gene066960:intron | 45.0% | |
AGTGACCTGCAACAACACAT+CGG | + | chr6.4:47968386-47968405 | None:intergenic | 45.0% | |
ATATACTCCTCCCAGTCCAT+TGG | + | chr6.4:47971797-47971816 | None:intergenic | 45.0% | |
ATATCCTCTCTCCCTAACCA+AGG | - | chr6.4:47971088-47971107 | MS.gene066960:intron | 45.0% | |
CAAAACCCTCGACAGTGTTA+TGG | - | chr6.4:47968237-47968256 | MS.gene066960:CDS | 45.0% | |
CAAGCAAACAATTCCCCCAA+TGG | - | chr6.4:47971778-47971797 | MS.gene066960:intron | 45.0% | |
CCAAGCTCTCAAATCTTGGT+AGG | - | chr6.4:47969308-47969327 | MS.gene066960:intron | 45.0% | |
CCTACCAAGATTTGAGAGCT+TGG | + | chr6.4:47969311-47969330 | None:intergenic | 45.0% | |
CCTATGCTCCTGGTTAAATG+AGG | + | chr6.4:47972502-47972521 | None:intergenic | 45.0% | |
CGATAAGGTTGCTCATTCTC+TGG | + | chr6.4:47969034-47969053 | None:intergenic | 45.0% | |
GGAAAATAGGGCTTGGAAAG+TGG | - | chr6.4:47968814-47968833 | MS.gene066960:intron | 45.0% | |
GGACCATAGAACAGCAAATG+AGG | + | chr6.4:47968421-47968440 | None:intergenic | 45.0% | |
GGTAGCGAAACAAACTACTC+TGG | + | chr6.4:47970887-47970906 | None:intergenic | 45.0% | |
GTGAACCATAACACTGTCGA+GGG | + | chr6.4:47968245-47968264 | None:intergenic | 45.0% | |
GTGGAGATTACTGTTGGACA+CGG | + | chr6.4:47971640-47971659 | None:intergenic | 45.0% | |
GTTATTGAGTGGTTGTTGGG+TGG | - | chr6.4:47969270-47969289 | MS.gene066960:CDS | 45.0% | |
GTTCCGCGAGCTATCAAATT+GGG | + | chr6.4:47972370-47972389 | None:intergenic | 45.0% | |
GTTGGGCATTATTGTTTGCC+AGG | - | chr6.4:47971191-47971210 | MS.gene066960:intron | 45.0% | |
TAGAAGGTCTACCCTTGGTT+AGG | + | chr6.4:47971103-47971122 | None:intergenic | 45.0% | |
TATACTCCTCCCAGTCCATT+GGG | + | chr6.4:47971796-47971815 | None:intergenic | 45.0% | |
TATCCTCTCTCCCTAACCAA+GGG | - | chr6.4:47971089-47971108 | MS.gene066960:intron | 45.0% | |
TCCTTCCTCATCGCAACATT+CGG | - | chr6.4:47973097-47973116 | MS.gene066960:CDS | 45.0% | |
TGAAGGAACAGAGCCCAAAA+AGG | - | chr6.4:47971840-47971859 | MS.gene066960:intron | 45.0% | |
TGAAGGTGGAAAATAGGGCT+TGG | - | chr6.4:47968807-47968826 | MS.gene066960:intron | 45.0% | |
TGCAGTAATACTGCAAGCCA+AGG | + | chr6.4:47970128-47970147 | None:intergenic | 45.0% | |
TGGGGGAATTGTTTGCTTGT+CGG | + | chr6.4:47971777-47971796 | None:intergenic | 45.0% | |
TGTGAACCATAACACTGTCG+AGG | + | chr6.4:47968246-47968265 | None:intergenic | 45.0% | |
TGTTCCGCGAGCTATCAAAT+TGG | + | chr6.4:47972371-47972390 | None:intergenic | 45.0% | |
! | AAAAAGACCTTTTCGGCACC+GGG | + | chr6.4:47968499-47968518 | None:intergenic | 45.0% |
! | AACAATTCCCCCAATGGACT+GGG | - | chr6.4:47971784-47971803 | MS.gene066960:intron | 45.0% |
! | ACTGCCACAAAAACTGACTC+TGG | + | chr6.4:47969158-47969177 | None:intergenic | 45.0% |
! | CATAACACTGTCGAGGGTTT+TGG | + | chr6.4:47968239-47968258 | None:intergenic | 45.0% |
! | CCTCATTTAACCAGGAGCAT+AGG | - | chr6.4:47972499-47972518 | MS.gene066960:CDS | 45.0% |
! | CTGACCAGAGTCAGTTTTTG+TGG | - | chr6.4:47969151-47969170 | MS.gene066960:intron | 45.0% |
! | GCTGCAACTTCCTTCTAGTT+TGG | - | chr6.4:47971550-47971569 | MS.gene066960:CDS | 45.0% |
! | GGTGGATTCTCCATGCATTT+CGG | + | chr6.4:47971163-47971182 | None:intergenic | 45.0% |
! | GTTGATGTTTCAGGTGAAGG+TGG | - | chr6.4:47968793-47968812 | MS.gene066960:CDS | 45.0% |
! | TCCTCCGGAGATCATTTTGA+AGG | - | chr6.4:47972083-47972102 | MS.gene066960:intron | 45.0% |
! | TTGCTGTTCTATGGTCCATC+AGG | - | chr6.4:47968424-47968443 | MS.gene066960:intron | 45.0% |
!! | AATGCCCAACATTGACTTGG+TGG | + | chr6.4:47971181-47971200 | None:intergenic | 45.0% |
!! | AGCCTATGAGGCTGATTTGT+GGG | + | chr6.4:47971131-47971150 | None:intergenic | 45.0% |
!! | TTGGAAGTGCTAAAAGGTGC+CGG | + | chr6.4:47971008-47971027 | None:intergenic | 45.0% |
ATACTCCTCCCAGTCCATTG+GGG | + | chr6.4:47971795-47971814 | None:intergenic | 50.0% | |
ATGCGAGCAGCCAAACTAGA+AGG | + | chr6.4:47971563-47971582 | None:intergenic | 50.0% | |
CGCTTGGAGTCATTTCGATG+TGG | + | chr6.4:47969759-47969778 | None:intergenic | 50.0% | |
GAAATGACTCCAAGCGATGC+AGG | - | chr6.4:47969763-47969782 | MS.gene066960:CDS | 50.0% | |
GATCTCCGGAGGAATGCAAT+TGG | + | chr6.4:47972076-47972095 | None:intergenic | 50.0% | |
GCACATTAAGACAACGGGAG+CGG | + | chr6.4:47970372-47970391 | None:intergenic | 50.0% | |
GCATTCTCTCCGCAGAACAA+TGG | - | chr6.4:47970279-47970298 | MS.gene066960:intron | 50.0% | |
GCTCTTCTCCGCCAAATGTT+TGG | - | chr6.4:47968472-47968491 | MS.gene066960:intron | 50.0% | |
GCTGACCAATTGCATTCCTC+CGG | - | chr6.4:47972068-47972087 | MS.gene066960:intron | 50.0% | |
GGCAATAGCTACTACCCGTA+TGG | + | chr6.4:47970809-47970828 | None:intergenic | 50.0% | |
GGCAATAGCTGCTAACCGTA+TGG | + | chr6.4:47970724-47970743 | None:intergenic | 50.0% | |
GGTTAGGGAGAGAGGATATC+AGG | + | chr6.4:47971087-47971106 | None:intergenic | 50.0% | |
TCCTTATGTGCTTCACCGAC+CGG | - | chr6.4:47970986-47971005 | MS.gene066960:CDS | 50.0% | |
TGTTCTGCGGAGAGAATGCT+GGG | + | chr6.4:47970278-47970297 | None:intergenic | 50.0% | |
TTGTTCTGCGGAGAGAATGC+TGG | + | chr6.4:47970279-47970298 | None:intergenic | 50.0% | |
! | TGGATCCGATGTGTTGTTGC+AGG | - | chr6.4:47968378-47968397 | MS.gene066960:intron | 50.0% |
!! | AAGTGCTAAAAGGTGCCGGT+CGG | + | chr6.4:47971004-47971023 | None:intergenic | 50.0% |
!! | CAGCCTATGAGGCTGATTTG+TGG | + | chr6.4:47971132-47971151 | None:intergenic | 50.0% |
!! | CCTATGAGGCTGATTTGTGG+GGG | + | chr6.4:47971129-47971148 | None:intergenic | 50.0% |
!! | CTGGTCAGTTTTGGCCTTCT+AGG | + | chr6.4:47969139-47969158 | None:intergenic | 50.0% |
!! | CTTGAGCACTGTTTTCAGGC+TGG | - | chr6.4:47969688-47969707 | MS.gene066960:CDS | 50.0% |
!! | GCCTATGAGGCTGATTTGTG+GGG | + | chr6.4:47971130-47971149 | None:intergenic | 50.0% |
!! | TGATTTGTGGGGGCACTAGA+AGG | + | chr6.4:47971119-47971138 | None:intergenic | 50.0% |
AGGCCCTCCCTTATGAAGCA+TGG | + | chr6.4:47970672-47970691 | None:intergenic | 55.0% | |
CACCGGGTCCAAACATTTGG+CGG | + | chr6.4:47968483-47968502 | None:intergenic | 55.0% | |
CCCCCACAAATCAGCCTCAT+AGG | - | chr6.4:47971126-47971145 | MS.gene066960:intron | 55.0% | |
CTACCCTTGGTTAGGGAGAG+AGG | + | chr6.4:47971095-47971114 | None:intergenic | 55.0% | |
CTCCGCCAAATGTTTGGACC+CGG | - | chr6.4:47968478-47968497 | MS.gene066960:intron | 55.0% | |
GCCGAATGTTGCGATGAGGA+AGG | + | chr6.4:47973101-47973120 | None:intergenic | 55.0% | |
GGATGAGAGGTAGGCCTAGA+AGG | - | chr6.4:47969122-47969141 | MS.gene066960:intron | 55.0% | |
GGCACTAGAAGGTCTACCCT+TGG | + | chr6.4:47971108-47971127 | None:intergenic | 55.0% | |
TACTCCTCCCAGTCCATTGG+GGG | + | chr6.4:47971794-47971813 | None:intergenic | 55.0% | |
TACTGCAAGCCAAGGTGGAG+AGG | + | chr6.4:47970120-47970139 | None:intergenic | 55.0% | |
TCCAAGCGATGCAGGCTTTC+AGG | - | chr6.4:47969771-47969790 | MS.gene066960:CDS | 55.0% | |
TCCTGAAAGCCTGCATCGCT+TGG | + | chr6.4:47969775-47969794 | None:intergenic | 55.0% | |
TGGTTGTTGGGTGGGACTGT+GGG | - | chr6.4:47969279-47969298 | MS.gene066960:CDS | 55.0% | |
TTCTATGGTCCATCAGGCGC+AGG | - | chr6.4:47968430-47968449 | MS.gene066960:intron | 55.0% | |
! | GTTTTCTTGCCTGCGCCTGA+TGG | + | chr6.4:47968442-47968461 | None:intergenic | 55.0% |
!! | AATTCCCCCAATGGACTGGG+AGG | - | chr6.4:47971787-47971806 | MS.gene066960:intron | 55.0% |
CAAGGCGCATCCTATGCTCC+TGG | + | chr6.4:47972512-47972531 | None:intergenic | 60.0% | |
GCCGGTCGGTGAAGCACATA+AGG | + | chr6.4:47970990-47971009 | None:intergenic | 60.0% | |
GTGGTTGTTGGGTGGGACTG+TGG | - | chr6.4:47969278-47969297 | MS.gene066960:CDS | 60.0% | |
! | CAGGAGCATAGGATGCGCCT+TGG | - | chr6.4:47972510-47972529 | MS.gene066960:intron | 60.0% |
! | CGGCACCGGGTCCAAACATT+TGG | + | chr6.4:47968486-47968505 | None:intergenic | 60.0% |
! | GTTTGGACCCGGTGCCGAAA+AGG | - | chr6.4:47968489-47968508 | MS.gene066960:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 47968211 | 47973123 | 47968211 | ID=MS.gene066960 |
chr6.4 | mRNA | 47968211 | 47973123 | 47968211 | ID=MS.gene066960.t1;Parent=MS.gene066960 |
chr6.4 | exon | 47973040 | 47973123 | 47973040 | ID=MS.gene066960.t1.exon1;Parent=MS.gene066960.t1 |
chr6.4 | CDS | 47973040 | 47973123 | 47973040 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
chr6.4 | exon | 47972824 | 47972934 | 47972824 | ID=MS.gene066960.t1.exon2;Parent=MS.gene066960.t1 |
chr6.4 | CDS | 47972824 | 47972934 | 47972824 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
chr6.4 | exon | 47972496 | 47972528 | 47972496 | ID=MS.gene066960.t1.exon3;Parent=MS.gene066960.t1 |
chr6.4 | CDS | 47972496 | 47972528 | 47972496 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
chr6.4 | exon | 47971460 | 47971628 | 47971460 | ID=MS.gene066960.t1.exon4;Parent=MS.gene066960.t1 |
chr6.4 | CDS | 47971460 | 47971628 | 47971460 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
chr6.4 | exon | 47970917 | 47971098 | 47970917 | ID=MS.gene066960.t1.exon5;Parent=MS.gene066960.t1 |
chr6.4 | CDS | 47970917 | 47971098 | 47970917 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
chr6.4 | exon | 47969686 | 47969822 | 47969686 | ID=MS.gene066960.t1.exon6;Parent=MS.gene066960.t1 |
chr6.4 | CDS | 47969686 | 47969822 | 47969686 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
chr6.4 | exon | 47969473 | 47969571 | 47969473 | ID=MS.gene066960.t1.exon7;Parent=MS.gene066960.t1 |
chr6.4 | CDS | 47969473 | 47969571 | 47969473 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
chr6.4 | exon | 47969230 | 47969299 | 47969230 | ID=MS.gene066960.t1.exon8;Parent=MS.gene066960.t1 |
chr6.4 | CDS | 47969230 | 47969299 | 47969230 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
chr6.4 | exon | 47969064 | 47969138 | 47969064 | ID=MS.gene066960.t1.exon9;Parent=MS.gene066960.t1 |
chr6.4 | CDS | 47969064 | 47969138 | 47969064 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
chr6.4 | exon | 47968776 | 47968821 | 47968776 | ID=MS.gene066960.t1.exon10;Parent=MS.gene066960.t1 |
chr6.4 | CDS | 47968776 | 47968821 | 47968776 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
chr6.4 | exon | 47968211 | 47968269 | 47968211 | ID=MS.gene066960.t1.exon11;Parent=MS.gene066960.t1 |
chr6.4 | CDS | 47968211 | 47968269 | 47968211 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
Gene Sequence |
Protein sequence |