Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066960.t1 | XP_013452656.1 | 98.9 | 354 | 4 | 0 | 1 | 354 | 1 | 354 | 7.90E-198 | 699.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066960.t1 | Q8VXX4 | 83.9 | 354 | 57 | 0 | 1 | 354 | 1 | 354 | 2.1e-175 | 616.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066960.t1 | A0A072UA77 | 98.9 | 354 | 4 | 0 | 1 | 354 | 1 | 354 | 5.7e-198 | 699.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066960.t1 | MTR_6g471010 | 98.870 | 354 | 4 | 0 | 1 | 354 | 1 | 354 | 0.0 | 732 |
| MS.gene066960.t1 | MTR_6g027590 | 96.610 | 354 | 12 | 0 | 1 | 354 | 1 | 354 | 0.0 | 721 |
| MS.gene066960.t1 | MTR_5g020810 | 36.000 | 350 | 205 | 4 | 2 | 346 | 413 | 748 | 2.89e-75 | 247 |
| MS.gene066960.t1 | MTR_3g118160 | 30.319 | 376 | 228 | 8 | 2 | 347 | 421 | 792 | 6.16e-46 | 167 |
| MS.gene066960.t1 | MTR_3g088120 | 25.072 | 347 | 217 | 6 | 2 | 341 | 33 | 343 | 1.99e-33 | 127 |
| MS.gene066960.t1 | MTR_3g088120 | 28.279 | 244 | 146 | 2 | 2 | 245 | 33 | 247 | 3.34e-33 | 125 |
| MS.gene066960.t1 | MTR_3g088380 | 32.218 | 239 | 125 | 4 | 3 | 234 | 11 | 219 | 4.47e-33 | 125 |
| MS.gene066960.t1 | MTR_4g102860 | 30.556 | 216 | 118 | 4 | 3 | 217 | 17 | 201 | 1.48e-24 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066960.t1 | AT5G27740 | 83.898 | 354 | 57 | 0 | 1 | 354 | 1 | 354 | 0.0 | 646 |
| MS.gene066960.t1 | AT1G21690 | 33.333 | 234 | 119 | 4 | 3 | 229 | 11 | 214 | 8.58e-33 | 125 |
| MS.gene066960.t1 | AT1G21690 | 32.636 | 239 | 124 | 4 | 3 | 234 | 11 | 219 | 1.06e-32 | 125 |
| MS.gene066960.t1 | AT1G21690 | 32.051 | 234 | 115 | 4 | 3 | 229 | 11 | 207 | 4.11e-30 | 117 |
| MS.gene066960.t1 | AT1G77470 | 27.347 | 245 | 148 | 3 | 3 | 247 | 41 | 255 | 2.24e-29 | 116 |
| MS.gene066960.t1 | AT1G21690 | 32.636 | 239 | 112 | 6 | 3 | 234 | 11 | 207 | 2.64e-29 | 115 |
| MS.gene066960.t1 | AT1G63160 | 27.126 | 247 | 146 | 6 | 3 | 248 | 17 | 230 | 6.99e-23 | 98.2 |
Find 75 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAAGCGATGCAGGCTTTC+AGG | 0.177682 | 6.4:-47971541 | MS.gene066960:CDS |
| CATAACACTGTCGAGGGTTT+TGG | 0.212335 | 6.4:+47973076 | None:intergenic |
| AGAAATCAAATCGGAATTTA+AGG | 0.217343 | 6.4:-47969724 | MS.gene066960:CDS |
| TGTCCTCATTTGCTGTTCTA+TGG | 0.252413 | 6.4:-47972897 | MS.gene066960:CDS |
| TGCTCAAAATCTCAAGAAAT+TGG | 0.257130 | 6.4:-47973039 | MS.gene066960:intron |
| TTCAGGTGAAGGTGGAAAAT+AGG | 0.275227 | 6.4:-47972511 | MS.gene066960:intron |
| CGGCACCGGGTCCAAACATT+TGG | 0.299333 | 6.4:+47972829 | None:intergenic |
| TTTCTTCCCTTTAGTATCAA+TGG | 0.323241 | 6.4:+47971470 | None:intergenic |
| AAAGGGAAGAAAGGATTTAA+AGG | 0.324156 | 6.4:-47971459 | MS.gene066960:intron |
| GCTCTTCTCCGCCAAATGTT+TGG | 0.325475 | 6.4:-47972840 | MS.gene066960:CDS |
| GCTGCAACTTCCTTCTAGTT+TGG | 0.326964 | 6.4:-47969762 | MS.gene066960:CDS |
| TTCTTCCCTTTAGTATCAAT+GGG | 0.348124 | 6.4:+47971471 | None:intergenic |
| TCAGGTGAAGGTGGAAAATA+GGG | 0.353576 | 6.4:-47972510 | MS.gene066960:intron |
| TTATGAGCTATTGAGGAAAC+TGG | 0.357086 | 6.4:-47969108 | MS.gene066960:CDS |
| CTATACATTGGCAGCATTTG+TGG | 0.358356 | 6.4:-47968261 | MS.gene066960:intron |
| GCAAGTCTCAAATGACAATA+TGG | 0.375769 | 6.4:+47969697 | None:intergenic |
| TTGTTCTGCGGAGAGAATGC+TGG | 0.394620 | 6.4:+47971036 | None:intergenic |
| TCCTGAAAGCCTGCATCGCT+TGG | 0.402265 | 6.4:+47971540 | None:intergenic |
| CTATTTACCTGTTCTTCACT+TGG | 0.411342 | 6.4:+47970909 | None:intergenic |
| TATACTCCTCCCAGTCCATT+GGG | 0.413295 | 6.4:+47969519 | None:intergenic |
| TGAAGGAACAGAGCCCAAAA+AGG | 0.416911 | 6.4:-47969472 | MS.gene066960:intron |
| GACTTCTTTATGAGCTATTG+AGG | 0.419698 | 6.4:-47969115 | MS.gene066960:CDS |
| TCAAGAAATAATCAAAGAAA+TGG | 0.433507 | 6.4:-47971505 | MS.gene066960:CDS |
| TCCTTCCTCATCGCAACATT+CGG | 0.436381 | 6.4:-47968215 | MS.gene066960:CDS |
| CAAAACCCTCGACAGTGTTA+TGG | 0.439317 | 6.4:-47973075 | MS.gene066960:CDS |
| TAATGCACCAAGTGAAGAAC+AGG | 0.440498 | 6.4:-47970916 | MS.gene066960:intron |
| GTTTGGACCCGGTGCCGAAA+AGG | 0.441219 | 6.4:-47972823 | MS.gene066960:intron |
| CAGTTCATTGGTAAGAAAGA+AGG | 0.442426 | 6.4:-47969785 | MS.gene066960:CDS |
| TTGCTGTTCTATGGTCCATC+AGG | 0.446874 | 6.4:-47972888 | MS.gene066960:CDS |
| GGAAAATAGGGCTTGGAAAG+TGG | 0.454758 | 6.4:-47972498 | MS.gene066960:CDS |
| ATGCGAGCAGCCAAACTAGA+AGG | 0.460248 | 6.4:+47969752 | None:intergenic |
| AATTCGCACATTAAGACAAC+GGG | 0.461988 | 6.4:+47970938 | None:intergenic |
| TTTAGGTTGTTTCAAGTTCG+AGG | 0.467965 | 6.4:-47969282 | MS.gene066960:intron |
| AATAGACCCATTGATACTAA+AGG | 0.470695 | 6.4:-47971477 | MS.gene066960:CDS |
| ATAGACCCATTGATACTAAA+GGG | 0.485089 | 6.4:-47971476 | MS.gene066960:CDS |
| ATTGATACTAAAGGGAAGAA+AGG | 0.491720 | 6.4:-47971468 | MS.gene066960:CDS |
| CTCCGCCAAATGTTTGGACC+CGG | 0.492853 | 6.4:-47972834 | MS.gene066960:CDS |
| ATATACTCCTCCCAGTCCAT+TGG | 0.499233 | 6.4:+47969518 | None:intergenic |
| ATTGTTTGCTTGTCGGTGAA+AGG | 0.508946 | 6.4:+47969545 | None:intergenic |
| TAAAGAGAGCAAAGATGTTG+TGG | 0.510082 | 6.4:-47973115 | None:intergenic |
| AAAGAGAGCAAAGATGTTGT+GGG | 0.510264 | 6.4:-47973114 | None:intergenic |
| GCTGACCAATTGCATTCCTC+CGG | 0.512269 | 6.4:-47969244 | MS.gene066960:CDS |
| TGAAGGTGGAAAATAGGGCT+TGG | 0.512888 | 6.4:-47972505 | MS.gene066960:CDS |
| AGGCAAGAAAACACTAATCA+TGG | 0.515883 | 6.4:-47972862 | MS.gene066960:CDS |
| GATCTCCGGAGGAATGCAAT+TGG | 0.520414 | 6.4:+47969239 | None:intergenic |
| TTTACCTTCAAAATGATCTC+CGG | 0.522303 | 6.4:+47969225 | None:intergenic |
| TGAAGCATGAAATCTGCCAT+TGG | 0.524375 | 6.4:-47969076 | MS.gene066960:CDS |
| AGTTCATTGGTAAGAAAGAA+GGG | 0.531136 | 6.4:-47969784 | MS.gene066960:CDS |
| TGTTCTGCGGAGAGAATGCT+GGG | 0.531450 | 6.4:+47971037 | None:intergenic |
| GAAGCATGAAATCTGCCATT+GGG | 0.532158 | 6.4:-47969075 | MS.gene066960:CDS |
| GCACATTAAGACAACGGGAG+CGG | 0.533938 | 6.4:+47970943 | None:intergenic |
| CACCGGGTCCAAACATTTGG+CGG | 0.535929 | 6.4:+47972832 | None:intergenic |
| CAGGAGCATAGGATGCGCCT+TGG | 0.541208 | 6.4:-47968802 | MS.gene066960:CDS |
| CCTCATTTAACCAGGAGCAT+AGG | 0.541849 | 6.4:-47968813 | MS.gene066960:intron |
| GAAATGACTCCAAGCGATGC+AGG | 0.543849 | 6.4:-47971549 | MS.gene066960:CDS |
| TTCTATGGTCCATCAGGCGC+AGG | 0.544328 | 6.4:-47972882 | MS.gene066960:CDS |
| AATTGCATCTGACATAATGA+AGG | 0.551340 | 6.4:-47969489 | MS.gene066960:CDS |
| GCATTCTCTCCGCAGAACAA+TGG | 0.564370 | 6.4:-47971033 | MS.gene066960:CDS |
| CGCTTGGAGTCATTTCGATG+TGG | 0.565712 | 6.4:+47971556 | None:intergenic |
| GGACCATAGAACAGCAAATG+AGG | 0.571639 | 6.4:+47972894 | None:intergenic |
| GCATAGCAGAGAAATCAAAT+CGG | 0.583422 | 6.4:-47969733 | MS.gene066960:CDS |
| AATCAAATCGGAATTTAAGG+AGG | 0.587176 | 6.4:-47969721 | MS.gene066960:CDS |
| TGTATTTCTCCATTGTTCTG+CGG | 0.594797 | 6.4:+47971024 | None:intergenic |
| GTTGATGTTTCAGGTGAAGG+TGG | 0.620590 | 6.4:-47972519 | MS.gene066960:intron |
| GTGAACCATAACACTGTCGA+GGG | 0.625900 | 6.4:+47973070 | None:intergenic |
| ACCTTCAAAATGATCTCCGG+AGG | 0.628271 | 6.4:+47969228 | None:intergenic |
| ATCAAATCGGAATTTAAGGA+GGG | 0.630327 | 6.4:-47969720 | MS.gene066960:CDS |
| GCCGAATGTTGCGATGAGGA+AGG | 0.630554 | 6.4:+47968214 | None:intergenic |
| TTACATAATATGCTGCCCAA+TGG | 0.630713 | 6.4:+47969060 | None:intergenic |
| TACTCCTCCCAGTCCATTGG+GGG | 0.645004 | 6.4:+47969521 | None:intergenic |
| ATACTCCTCCCAGTCCATTG+GGG | 0.647707 | 6.4:+47969520 | None:intergenic |
| TAATTCGCACATTAAGACAA+CGG | 0.648193 | 6.4:+47970937 | None:intergenic |
| TGTGAACCATAACACTGTCG+AGG | 0.649165 | 6.4:+47973069 | None:intergenic |
| TTCAGCCGAATGTTGCGATG+AGG | 0.657182 | 6.4:+47968210 | None:intergenic |
| GTGGAGATTACTGTTGGACA+CGG | 0.686923 | 6.4:+47969675 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTATTTTCTATACAT+TGG | - | chr6.4:47973039-47973058 | MS.gene066960:intron | 10.0% |
| !!! | TATTTTAAGATAATAAAAGA+AGG | - | chr6.4:47969914-47969933 | MS.gene066960:intron | 10.0% |
| !! | ATAATATGCTATTATACTTT+AGG | - | chr6.4:47972013-47972032 | MS.gene066960:intron | 15.0% |
| !! | TGAAAAATAAGAAGTAAAAA+TGG | + | chr6.4:47972451-47972470 | None:intergenic | 15.0% |
| !!! | AAAAGTTTCAAATTTTTGTT+TGG | - | chr6.4:47968358-47968377 | MS.gene066960:intron | 15.0% |
| !! | ATATATTGATATGTAAGTCT+TGG | - | chr6.4:47972990-47973009 | MS.gene066960:intron | 20.0% |
| !! | GATCATCTTTATTGAATATT+TGG | - | chr6.4:47971474-47971493 | MS.gene066960:CDS | 20.0% |
| !! | TATATTGATATGTAAGTCTT+GGG | - | chr6.4:47972991-47973010 | MS.gene066960:intron | 20.0% |
| !! | TCAAGAAATAATCAAAGAAA+TGG | - | chr6.4:47969807-47969826 | MS.gene066960:intron | 20.0% |
| !! | TGGTTTCAGAATAATTATAA+AGG | + | chr6.4:47969369-47969388 | None:intergenic | 20.0% |
| !! | TGTAAGAATAAATAGGAAAA+AGG | - | chr6.4:47969223-47969242 | MS.gene066960:intron | 20.0% |
| !! | TTCAAAACATGAAAACTATA+AGG | - | chr6.4:47970780-47970799 | MS.gene066960:intron | 20.0% |
| !! | TTGATAGATTAAACATGTTA+GGG | - | chr6.4:47972787-47972806 | MS.gene066960:intron | 20.0% |
| !! | TTGTTGCAAAGTTTATTTAA+CGG | - | chr6.4:47968880-47968899 | MS.gene066960:intron | 20.0% |
| !! | TTTGATAGATTAAACATGTT+AGG | - | chr6.4:47972786-47972805 | MS.gene066960:intron | 20.0% |
| !! | TTTGTAAGTAAATCATAGTA+TGG | + | chr6.4:47972752-47972771 | None:intergenic | 20.0% |
| !!! | ACTTCTTATTTTTCAAAGTA+AGG | - | chr6.4:47972456-47972475 | MS.gene066960:intron | 20.0% |
| !!! | CATCTAACTAAAATTACTTT+TGG | + | chr6.4:47968634-47968653 | None:intergenic | 20.0% |
| !!! | CTACTTATTTTCATTTACTT+TGG | + | chr6.4:47972696-47972715 | None:intergenic | 20.0% |
| !!! | CTAGAAAAGCATTTTATAAT+CGG | + | chr6.4:47971266-47971285 | None:intergenic | 20.0% |
| !!! | GTATTCTTTATAATTTGCAA+TGG | + | chr6.4:47972627-47972646 | None:intergenic | 20.0% |
| !!! | GTTCTTAAATTTTGATGTTT+TGG | + | chr6.4:47970830-47970849 | None:intergenic | 20.0% |
| !!! | TCTAGAGTAAAAAAAATAGA+GGG | + | chr6.4:47972934-47972953 | None:intergenic | 20.0% |
| !!! | TCTGAATTTTGAAAGAATTT+TGG | - | chr6.4:47968574-47968593 | MS.gene066960:intron | 20.0% |
| !!! | TGTTGTTTGTAAGAATAAAT+AGG | - | chr6.4:47969216-47969235 | MS.gene066960:intron | 20.0% |
| !!! | TTCTAAAAAAAAGACCTTTT+CGG | + | chr6.4:47968506-47968525 | None:intergenic | 20.0% |
| !!! | TTCTAGAGTAAAAAAAATAG+AGG | + | chr6.4:47972935-47972954 | None:intergenic | 20.0% |
| !!! | TTGATTGATTCAAATACAAA+AGG | + | chr6.4:47968318-47968337 | None:intergenic | 20.0% |
| !!! | TTTTGTAAAAAACAAATCAG+TGG | + | chr6.4:47969068-47969087 | None:intergenic | 20.0% |
| ! | AAAACTATAAGGAAACCATA+CGG | - | chr6.4:47970706-47970725 | MS.gene066960:intron | 25.0% |
| ! | AAAATGCAGATTAAGAAACT+TGG | - | chr6.4:47971223-47971242 | MS.gene066960:intron | 25.0% |
| ! | AAACATCAAAATTCAAGAAC+TGG | - | chr6.4:47970745-47970764 | MS.gene066960:intron | 25.0% |
| ! | AATAAAAGAAGGAATCTTCA+TGG | - | chr6.4:47969925-47969944 | MS.gene066960:intron | 25.0% |
| ! | ACATAATATTGGAATTTCCA+AGG | + | chr6.4:47969600-47969619 | None:intergenic | 25.0% |
| ! | ACTCTTCTCTATCAATATAT+TGG | + | chr6.4:47969010-47969029 | None:intergenic | 25.0% |
| ! | AGAAATCAAATCGGAATTTA+AGG | - | chr6.4:47971588-47971607 | MS.gene066960:CDS | 25.0% |
| ! | AGTGGTCAATAATAATATTC+AGG | + | chr6.4:47968972-47968991 | None:intergenic | 25.0% |
| ! | ATACTTATGAAATGTGGAAT+TGG | - | chr6.4:47969464-47969483 | MS.gene066960:intron | 25.0% |
| ! | ATTTCAGTAAACATTGCTAT+AGG | - | chr6.4:47969101-47969120 | MS.gene066960:CDS | 25.0% |
| ! | CGTATTATACTTATGAAATG+TGG | - | chr6.4:47969458-47969477 | MS.gene066960:intron | 25.0% |
| ! | CTCAAATCATGAAAACTATA+AGG | - | chr6.4:47970695-47970714 | MS.gene066960:intron | 25.0% |
| ! | GGAAAAAAATTCCAAAACAT+AGG | + | chr6.4:47970474-47970493 | None:intergenic | 25.0% |
| ! | GGACAAATATTACAAATGTT+GGG | - | chr6.4:47972817-47972836 | MS.gene066960:intron | 25.0% |
| ! | GTAAGTGCATTATCAAATTA+TGG | - | chr6.4:47972271-47972290 | MS.gene066960:intron | 25.0% |
| ! | TACTTATGAAATGTGGAATT+GGG | - | chr6.4:47969465-47969484 | MS.gene066960:intron | 25.0% |
| ! | TCAACAAAGACAATTTAGAA+TGG | + | chr6.4:47968778-47968797 | None:intergenic | 25.0% |
| ! | TGAAATGAGTGACAAAAAAA+GGG | + | chr6.4:47968529-47968548 | None:intergenic | 25.0% |
| ! | TGGACAAATATTACAAATGT+TGG | - | chr6.4:47972816-47972835 | MS.gene066960:intron | 25.0% |
| !! | ATCTGAATGTTTGAAATAGT+TGG | - | chr6.4:47972567-47972586 | MS.gene066960:intron | 25.0% |
| !! | CATTAACTAGTCTAATATCA+AGG | + | chr6.4:47972410-47972429 | None:intergenic | 25.0% |
| !! | CTTGATATTAGACTAGTTAA+TGG | - | chr6.4:47972408-47972427 | MS.gene066960:intron | 25.0% |
| !! | TATAGCTATTGCTTTATTCA+AGG | - | chr6.4:47972960-47972979 | MS.gene066960:intron | 25.0% |
| !! | TATCAAAAGCAAACCTTTTT+GGG | + | chr6.4:47971856-47971875 | None:intergenic | 25.0% |
| !! | TCTGAATGTTTGAAATAGTT+GGG | - | chr6.4:47972568-47972587 | MS.gene066960:intron | 25.0% |
| !!! | GTTCTTGAATTTTGATGTTT+TGG | + | chr6.4:47970745-47970764 | None:intergenic | 25.0% |
| !!! | GTTTATTTTTTCTGAGTAGA+AGG | + | chr6.4:47969535-47969554 | None:intergenic | 25.0% |
| !!! | TGTATCTTTGAGTTTTTGAT+TGG | - | chr6.4:47968688-47968707 | MS.gene066960:intron | 25.0% |
| AAACTATAAGGAAACCATAC+GGG | - | chr6.4:47970707-47970726 | MS.gene066960:intron | 30.0% | |
| AAAGGGAAGAAAGGATTTAA+AGG | - | chr6.4:47969853-47969872 | MS.gene066960:intron | 30.0% | |
| AAATGCAGTGCACATAATAT+TGG | + | chr6.4:47969611-47969630 | None:intergenic | 30.0% | |
| AACAGATTCCATTATTTCCT+TGG | + | chr6.4:47970450-47970469 | None:intergenic | 30.0% | |
| AAGCACTCTAACATTTGTAT+AGG | - | chr6.4:47968903-47968922 | MS.gene066960:intron | 30.0% | |
| AAGGAATCTTACATAGGATT+GGG | + | chr6.4:47970971-47970990 | None:intergenic | 30.0% | |
| AATAGACCCATTGATACTAA+AGG | - | chr6.4:47969835-47969854 | MS.gene066960:intron | 30.0% | |
| AATATCATTGTCTTGATCCT+TGG | - | chr6.4:47969580-47969599 | MS.gene066960:intron | 30.0% | |
| AATCAAATCGGAATTTAAGG+AGG | - | chr6.4:47971591-47971610 | MS.gene066960:CDS | 30.0% | |
| AATTGCATCTGACATAATGA+AGG | - | chr6.4:47971823-47971842 | MS.gene066960:intron | 30.0% | |
| ACACAAGGATTGTATTCTTA+GGG | + | chr6.4:47968606-47968625 | None:intergenic | 30.0% | |
| ACATGCTTCCAATTTAATCT+GGG | - | chr6.4:47971658-47971677 | MS.gene066960:intron | 30.0% | |
| AGAAAGGATTTAAAGGTAAC+CGG | - | chr6.4:47969860-47969879 | MS.gene066960:intron | 30.0% | |
| AGCATAGAAAATGCAAATTC+AGG | - | chr6.4:47972871-47972890 | MS.gene066960:CDS | 30.0% | |
| AGTTCATTGGTAAGAAAGAA+GGG | - | chr6.4:47971528-47971547 | MS.gene066960:CDS | 30.0% | |
| AGTTGACAAAACAATCAAGT+AGG | + | chr6.4:47971949-47971968 | None:intergenic | 30.0% | |
| AGTTTAACAACAAAAACAGC+CGG | + | chr6.4:47969882-47969901 | None:intergenic | 30.0% | |
| ATAGAACAACATTCATCTAC+TGG | + | chr6.4:47970605-47970624 | None:intergenic | 30.0% | |
| ATAGACCCATTGATACTAAA+GGG | - | chr6.4:47969836-47969855 | MS.gene066960:intron | 30.0% | |
| ATCAAATCGGAATTTAAGGA+GGG | - | chr6.4:47971592-47971611 | MS.gene066960:CDS | 30.0% | |
| ATCAACATTCTTAGGAGAAA+TGG | + | chr6.4:47971033-47971052 | None:intergenic | 30.0% | |
| ATCAGCAAGCAAATATTGTA+TGG | + | chr6.4:47973018-47973037 | None:intergenic | 30.0% | |
| ATTAAGAAACTTGGAAAGGA+AGG | - | chr6.4:47971232-47971251 | MS.gene066960:intron | 30.0% | |
| ATTGATACTAAAGGGAAGAA+AGG | - | chr6.4:47969844-47969863 | MS.gene066960:intron | 30.0% | |
| ATTGTCTTTGTTGATGTTTC+AGG | - | chr6.4:47968784-47968803 | MS.gene066960:CDS | 30.0% | |
| CAAATTAAGGATGCAATTGA+TGG | + | chr6.4:47972651-47972670 | None:intergenic | 30.0% | |
| CAATATTAAGCATGTTCTCT+GGG | + | chr6.4:47970945-47970964 | None:intergenic | 30.0% | |
| CTCTAACATTTGTATAGGTT+AGG | - | chr6.4:47968908-47968927 | MS.gene066960:intron | 30.0% | |
| GCAACAAAACAGAAAGAAAA+GGG | + | chr6.4:47968867-47968886 | None:intergenic | 30.0% | |
| GCATAGAAAATGCAAATTCA+GGG | - | chr6.4:47972872-47972891 | MS.gene066960:CDS | 30.0% | |
| GTGAAATGAGTGACAAAAAA+AGG | + | chr6.4:47968530-47968549 | None:intergenic | 30.0% | |
| TAAGGAATCTTACATAGGAT+TGG | + | chr6.4:47970972-47970991 | None:intergenic | 30.0% | |
| TAATTCGCACATTAAGACAA+CGG | + | chr6.4:47970378-47970397 | None:intergenic | 30.0% | |
| TAGATGAATGTTGTTCTATG+AGG | - | chr6.4:47970606-47970625 | MS.gene066960:intron | 30.0% | |
| TATAAGTCCATGCTTCATAA+GGG | - | chr6.4:47970662-47970681 | MS.gene066960:intron | 30.0% | |
| TCAATATTAAGCATGTTCTC+TGG | + | chr6.4:47970946-47970965 | None:intergenic | 30.0% | |
| TGAAATAATTCCGAAATGCA+TGG | - | chr6.4:47971150-47971169 | MS.gene066960:intron | 30.0% | |
| TGAATATTTGGAAATCCATG+TGG | - | chr6.4:47971486-47971505 | MS.gene066960:CDS | 30.0% | |
| TGACTGTGTATAATGATGTT+TGG | - | chr6.4:47970023-47970042 | MS.gene066960:intron | 30.0% | |
| TGATATTACTTTCTGCGATT+TGG | - | chr6.4:47971302-47971321 | MS.gene066960:intron | 30.0% | |
| TGCAACAAAACAGAAAGAAA+AGG | + | chr6.4:47968868-47968887 | None:intergenic | 30.0% | |
| TGCTCAAAATCTCAAGAAAT+TGG | - | chr6.4:47968273-47968292 | MS.gene066960:intron | 30.0% | |
| TTAACATCCAACTTATAGAG+TGG | + | chr6.4:47971401-47971420 | None:intergenic | 30.0% | |
| TTATGCATCCCAGATTAAAT+TGG | + | chr6.4:47971669-47971688 | None:intergenic | 30.0% | |
| TTCTTCCCTTTAGTATCAAT+GGG | + | chr6.4:47969844-47969863 | None:intergenic | 30.0% | |
| TTGGGTAAAACATATACAGA+AGG | + | chr6.4:47972352-47972371 | None:intergenic | 30.0% | |
| TTTACCTGTGTAATGCTTTA+AGG | - | chr6.4:47970061-47970080 | MS.gene066960:intron | 30.0% | |
| TTTACCTTCAAAATGATCTC+CGG | + | chr6.4:47972090-47972109 | None:intergenic | 30.0% | |
| TTTCTTCCCTTTAGTATCAA+TGG | + | chr6.4:47969845-47969864 | None:intergenic | 30.0% | |
| ! | AAAGCAATTTTTCACATCGA+AGG | - | chr6.4:47972537-47972556 | MS.gene066960:intron | 30.0% |
| ! | AAGAAAAGGGAAGTATGAAA+AGG | + | chr6.4:47968854-47968873 | None:intergenic | 30.0% |
| ! | AGTAGAATGTCTTGTTAACT+TGG | + | chr6.4:47970909-47970928 | None:intergenic | 30.0% |
| ! | AGTTTTCATGATTTGAGCTT+AGG | + | chr6.4:47970692-47970711 | None:intergenic | 30.0% |
| ! | ATTTACTTTGGAGACAAACT+AGG | + | chr6.4:47972684-47972703 | None:intergenic | 30.0% |
| ! | CCTAAGAATGTTGATTATGA+CGG | - | chr6.4:47971038-47971057 | MS.gene066960:CDS | 30.0% |
| ! | CTTCTCAAAGCTTTTCTTTA+AGG | - | chr6.4:47971705-47971724 | MS.gene066960:intron | 30.0% |
| ! | GTAGAATGTCTTGTTAACTT+GGG | + | chr6.4:47970908-47970927 | None:intergenic | 30.0% |
| ! | GTATCAAAAGCAAACCTTTT+TGG | + | chr6.4:47971857-47971876 | None:intergenic | 30.0% |
| ! | GTTGAAGTTTTACAGTTCAT+TGG | - | chr6.4:47971515-47971534 | MS.gene066960:CDS | 30.0% |
| ! | TGAATCATTGGTGTCTTATT+TGG | - | chr6.4:47969642-47969661 | MS.gene066960:intron | 30.0% |
| ! | TGCTTTTCTAGATATACTGA+AGG | - | chr6.4:47971275-47971294 | MS.gene066960:intron | 30.0% |
| ! | TTCTAAGGATTATATCTGCT+TGG | - | chr6.4:47971335-47971354 | MS.gene066960:intron | 30.0% |
| !! | AAGACATTCTACTGACTTAT+TGG | - | chr6.4:47970916-47970935 | MS.gene066960:intron | 30.0% |
| !! | AAGCTTTTCTTTAAGGAAGA+AGG | - | chr6.4:47971712-47971731 | MS.gene066960:intron | 30.0% |
| AAACATTGCTATAGGATGAG+AGG | - | chr6.4:47969109-47969128 | MS.gene066960:CDS | 35.0% | |
| AAACTGATACCAAACAGTTC+TGG | + | chr6.4:47969434-47969453 | None:intergenic | 35.0% | |
| AAATTCAGGGACAAAAATGG+TGG | - | chr6.4:47972885-47972904 | MS.gene066960:CDS | 35.0% | |
| AAGATGTAGAACAAAGACAC+AGG | + | chr6.4:47969342-47969361 | None:intergenic | 35.0% | |
| AATTCGCACATTAAGACAAC+GGG | + | chr6.4:47970377-47970396 | None:intergenic | 35.0% | |
| ACAACCACTCAATAACTTCT+AGG | + | chr6.4:47969266-47969285 | None:intergenic | 35.0% | |
| AGAAGTTATTGAGTGGTTGT+TGG | - | chr6.4:47969266-47969285 | MS.gene066960:CDS | 35.0% | |
| AGACATTGCTCACTAACTAA+GGG | + | chr6.4:47968948-47968967 | None:intergenic | 35.0% | |
| AGCATTTCCACTCTATAAGT+TGG | - | chr6.4:47971391-47971410 | MS.gene066960:intron | 35.0% | |
| AGGAATCTTACATAGGATTG+GGG | + | chr6.4:47970970-47970989 | None:intergenic | 35.0% | |
| AGGAGAGAATGTGCAAATTA+AGG | + | chr6.4:47972664-47972683 | None:intergenic | 35.0% | |
| AGGCAAGAAAACACTAATCA+TGG | - | chr6.4:47968450-47968469 | MS.gene066960:intron | 35.0% | |
| AGTCTAATATCAAGGCAATG+AGG | + | chr6.4:47972402-47972421 | None:intergenic | 35.0% | |
| ATGAATGTTGTTCTATGAGG+TGG | - | chr6.4:47970609-47970628 | MS.gene066960:intron | 35.0% | |
| ATTCTTAGGAGAAATGGTCT+TGG | + | chr6.4:47971027-47971046 | None:intergenic | 35.0% | |
| CACACAAGGATTGTATTCTT+AGG | + | chr6.4:47968607-47968626 | None:intergenic | 35.0% | |
| CACATGCTTCCAATTTAATC+TGG | - | chr6.4:47971657-47971676 | MS.gene066960:intron | 35.0% | |
| CAGTTCATTGGTAAGAAAGA+AGG | - | chr6.4:47971527-47971546 | MS.gene066960:CDS | 35.0% | |
| CCGTCATAATCAACATTCTT+AGG | + | chr6.4:47971041-47971060 | None:intergenic | 35.0% | |
| CCTCAATGCTAAAAAACAAG+GGG | + | chr6.4:47970495-47970514 | None:intergenic | 35.0% | |
| CTATTTACCTGTTCTTCACT+TGG | + | chr6.4:47970406-47970425 | None:intergenic | 35.0% | |
| GAAAAATTGCTTTCTGTCCA+AGG | + | chr6.4:47972530-47972549 | None:intergenic | 35.0% | |
| GAACTATTTCCAGAACTGTT+TGG | - | chr6.4:47969422-47969441 | MS.gene066960:intron | 35.0% | |
| GAAGTTATTGAGTGGTTGTT+GGG | - | chr6.4:47969267-47969286 | MS.gene066960:CDS | 35.0% | |
| GCAAGTCTCAAATGACAATA+TGG | + | chr6.4:47971618-47971637 | None:intergenic | 35.0% | |
| GCACATAAGGAATCTTACAT+AGG | + | chr6.4:47970977-47970996 | None:intergenic | 35.0% | |
| GCAGATTAAGAAACTTGGAA+AGG | - | chr6.4:47971228-47971247 | MS.gene066960:intron | 35.0% | |
| GCATAGCAGAGAAATCAAAT+CGG | - | chr6.4:47971579-47971598 | MS.gene066960:CDS | 35.0% | |
| GCCTCAATGCTAAAAAACAA+GGG | + | chr6.4:47970496-47970515 | None:intergenic | 35.0% | |
| GGAAAAAGGCAAGTCATAAT+TGG | - | chr6.4:47969237-47969256 | MS.gene066960:CDS | 35.0% | |
| GTATAAGTCCATGCTTCATA+AGG | - | chr6.4:47970661-47970680 | MS.gene066960:intron | 35.0% | |
| GTGTATAATGATGTTTGGTC+TGG | - | chr6.4:47970028-47970047 | MS.gene066960:intron | 35.0% | |
| TAAACATGTTAGGGACTAAC+TGG | - | chr6.4:47972796-47972815 | MS.gene066960:intron | 35.0% | |
| TGACAAAACAATCAAGTAGG+CGG | + | chr6.4:47971946-47971965 | None:intergenic | 35.0% | |
| TGCAAATTCAGGGACAAAAA+TGG | - | chr6.4:47972882-47972901 | MS.gene066960:CDS | 35.0% | |
| TGCAAGAACACACAATACAA+TGG | + | chr6.4:47969389-47969408 | None:intergenic | 35.0% | |
| TGCCTCAATGCTAAAAAACA+AGG | + | chr6.4:47970497-47970516 | None:intergenic | 35.0% | |
| TGGAACTGTTTGACAATAAG+TGG | + | chr6.4:47968990-47969009 | None:intergenic | 35.0% | |
| TGTAGTGTCCAAGGAAATAA+TGG | - | chr6.4:47970439-47970458 | MS.gene066960:intron | 35.0% | |
| TGTATTTCTCCATTGTTCTG+CGG | + | chr6.4:47970291-47970310 | None:intergenic | 35.0% | |
| TGTGTGTTCTTGCAATATTC+TGG | - | chr6.4:47969395-47969414 | MS.gene066960:intron | 35.0% | |
| TTACATAATATGCTGCCCAA+TGG | + | chr6.4:47972255-47972274 | None:intergenic | 35.0% | |
| TTCTCTGTGAACTGAATCAT+TGG | - | chr6.4:47969630-47969649 | MS.gene066960:intron | 35.0% | |
| TTTGCAACTGTTCTGACTAT+AGG | - | chr6.4:47969490-47969509 | MS.gene066960:CDS | 35.0% | |
| TTTGGTCAAGTTCTCTTCTA+AGG | - | chr6.4:47971320-47971339 | MS.gene066960:intron | 35.0% | |
| ! | AATAATGCCCAACATTGACT+TGG | + | chr6.4:47971184-47971203 | None:intergenic | 35.0% |
| ! | ATTGAGGCAATTGTTTTCTC+TGG | - | chr6.4:47970508-47970527 | MS.gene066960:intron | 35.0% |
| ! | CAGATTAAATTGGAAGCATG+TGG | + | chr6.4:47971659-47971678 | None:intergenic | 35.0% |
| ! | GGAATCTGTTTCCTATGTTT+TGG | - | chr6.4:47970460-47970479 | MS.gene066960:intron | 35.0% |
| ! | TTTGTTGATGTTTCAGGTGA+AGG | - | chr6.4:47968790-47968809 | MS.gene066960:CDS | 35.0% |
| !! | GTGGTAAGTTGATATCGATA+AGG | + | chr6.4:47969049-47969068 | None:intergenic | 35.0% |
| !! | TTTAGGTTGTTTCAAGTTCG+AGG | - | chr6.4:47972030-47972049 | MS.gene066960:intron | 35.0% |
| !!! | AGTAGAAGGCATTCATTTTG+AGG | + | chr6.4:47969521-47969540 | None:intergenic | 35.0% |
| !!! | CTGCATTTTTTAGTATGTCC+TGG | + | chr6.4:47971212-47971231 | None:intergenic | 35.0% |
| AACTTCAACAATCTGCCACA+TGG | + | chr6.4:47971504-47971523 | None:intergenic | 40.0% | |
| AAGCATGTGGAGATTACTGT+TGG | + | chr6.4:47971646-47971665 | None:intergenic | 40.0% | |
| AATAAGAAACCTCTCCACCT+TGG | - | chr6.4:47970108-47970127 | MS.gene066960:intron | 40.0% | |
| AGAAACTTGGAAAGGAAGGT+TGG | - | chr6.4:47971236-47971255 | MS.gene066960:intron | 40.0% | |
| AGAACCAAGCTCTCAAATCT+TGG | - | chr6.4:47969304-47969323 | MS.gene066960:intron | 40.0% | |
| AGAATCCACCAAGTCAATGT+TGG | - | chr6.4:47971173-47971192 | MS.gene066960:intron | 40.0% | |
| AGTATCTTCTGCATGAACTC+AGG | - | chr6.4:47972326-47972345 | MS.gene066960:intron | 40.0% | |
| ATTGCTATAGGATGAGAGGT+AGG | - | chr6.4:47969113-47969132 | MS.gene066960:CDS | 40.0% | |
| ATTGTTTGCTTGTCGGTGAA+AGG | + | chr6.4:47971770-47971789 | None:intergenic | 40.0% | |
| CAGACATTGCTCACTAACTA+AGG | + | chr6.4:47968949-47968968 | None:intergenic | 40.0% | |
| CGGAATTATTTCAGCCTATG+AGG | + | chr6.4:47971143-47971162 | None:intergenic | 40.0% | |
| CTATACATTGGCAGCATTTG+TGG | - | chr6.4:47973051-47973070 | MS.gene066960:CDS | 40.0% | |
| CTATGCTCCTGGTTAAATGA+GGG | + | chr6.4:47972501-47972520 | None:intergenic | 40.0% | |
| GAAACTTGGAAAGGAAGGTT+GGG | - | chr6.4:47971237-47971256 | MS.gene066960:intron | 40.0% | |
| GAAGCATGAAATCTGCCATT+GGG | - | chr6.4:47972237-47972256 | MS.gene066960:intron | 40.0% | |
| GAATCCACCAAGTCAATGTT+GGG | - | chr6.4:47971174-47971193 | MS.gene066960:intron | 40.0% | |
| GCAAGAAGTAACAGTAGTTC+TGG | + | chr6.4:47968740-47968759 | None:intergenic | 40.0% | |
| GGAATCTTACATAGGATTGG+GGG | + | chr6.4:47970969-47970988 | None:intergenic | 40.0% | |
| GGCGGTTATAAAAACTGACA+AGG | + | chr6.4:47971928-47971947 | None:intergenic | 40.0% | |
| GTGTTCTTGCAATATTCTGG+CGG | - | chr6.4:47969398-47969417 | MS.gene066960:intron | 40.0% | |
| GTTGCCTAGAAGTTATTGAG+TGG | - | chr6.4:47969259-47969278 | MS.gene066960:CDS | 40.0% | |
| TAATGCACCAAGTGAAGAAC+AGG | - | chr6.4:47970396-47970415 | MS.gene066960:intron | 40.0% | |
| TAGAACAAAGACACAGGACA+TGG | + | chr6.4:47969336-47969355 | None:intergenic | 40.0% | |
| TATGCTCCTGGTTAAATGAG+GGG | + | chr6.4:47972500-47972519 | None:intergenic | 40.0% | |
| TCAGGTGAAGGTGGAAAATA+GGG | - | chr6.4:47968802-47968821 | MS.gene066960:CDS | 40.0% | |
| TCTTCATGGTCAACAAACAG+TGG | - | chr6.4:47969939-47969958 | MS.gene066960:intron | 40.0% | |
| TGAAGCATGAAATCTGCCAT+TGG | - | chr6.4:47972236-47972255 | MS.gene066960:intron | 40.0% | |
| TTATTGAGTGGTTGTTGGGT+GGG | - | chr6.4:47969271-47969290 | MS.gene066960:CDS | 40.0% | |
| TTCAGGTGAAGGTGGAAAAT+AGG | - | chr6.4:47968801-47968820 | MS.gene066960:CDS | 40.0% | |
| TTCTTTCCCCTCATTTAACC+AGG | - | chr6.4:47972491-47972510 | MS.gene066960:intron | 40.0% | |
| ! | AAAAAAGACCTTTTCGGCAC+CGG | + | chr6.4:47968500-47968519 | None:intergenic | 40.0% |
| ! | AGAGCCTTAAAGCATTACAC+AGG | + | chr6.4:47970068-47970087 | None:intergenic | 40.0% |
| ! | AGGCAATTGTTTTCTCTGGT+AGG | - | chr6.4:47970512-47970531 | MS.gene066960:intron | 40.0% |
| ! | ATAACACTGTCGAGGGTTTT+GGG | + | chr6.4:47968238-47968257 | None:intergenic | 40.0% |
| ! | GAAGTTTTCTGTAGTGTCCA+AGG | - | chr6.4:47970430-47970449 | MS.gene066960:intron | 40.0% |
| ! | GGCAATTGTTTTCTCTGGTA+GGG | - | chr6.4:47970513-47970532 | MS.gene066960:intron | 40.0% |
| ! | TTACCCAATTTGATAGCTCG+CGG | - | chr6.4:47972364-47972383 | MS.gene066960:intron | 40.0% |
| !! | AAACTGACTCTGGTCAGTTT+TGG | + | chr6.4:47969148-47969167 | None:intergenic | 40.0% |
| !! | ACAGCTCATGTGTTACTTGT+AGG | - | chr6.4:47971741-47971760 | MS.gene066960:intron | 40.0% |
| !! | AGTACTTGAGCACTGTTTTC+AGG | - | chr6.4:47969684-47969703 | MS.gene066960:intron | 40.0% |
| !! | ATGGTCTTGGAAGTGCTAAA+AGG | + | chr6.4:47971014-47971033 | None:intergenic | 40.0% |
| !! | TGTCCTCATTTGCTGTTCTA+TGG | - | chr6.4:47968415-47968434 | MS.gene066960:intron | 40.0% |
| !!! | CCCCTTGTTTTTTAGCATTG+AGG | - | chr6.4:47970492-47970511 | MS.gene066960:intron | 40.0% |
| !!! | TTACTTTTGGTGCTCACACA+AGG | + | chr6.4:47968621-47968640 | None:intergenic | 40.0% |
| AAACAATTCCCCCAATGGAC+TGG | - | chr6.4:47971783-47971802 | MS.gene066960:intron | 45.0% | |
| AAGTCCATGCTTCATAAGGG+AGG | - | chr6.4:47970665-47970684 | MS.gene066960:intron | 45.0% | |
| ACCTTCAAAATGATCTCCGG+AGG | + | chr6.4:47972087-47972106 | None:intergenic | 45.0% | |
| AGAAGGTCTACCCTTGGTTA+GGG | + | chr6.4:47971102-47971121 | None:intergenic | 45.0% | |
| AGTAATACTGCAAGCCAAGG+TGG | + | chr6.4:47970125-47970144 | None:intergenic | 45.0% | |
| AGTCCATGCTTCATAAGGGA+GGG | - | chr6.4:47970666-47970685 | MS.gene066960:intron | 45.0% | |
| AGTGACCTGCAACAACACAT+CGG | + | chr6.4:47968386-47968405 | None:intergenic | 45.0% | |
| ATATACTCCTCCCAGTCCAT+TGG | + | chr6.4:47971797-47971816 | None:intergenic | 45.0% | |
| ATATCCTCTCTCCCTAACCA+AGG | - | chr6.4:47971088-47971107 | MS.gene066960:intron | 45.0% | |
| CAAAACCCTCGACAGTGTTA+TGG | - | chr6.4:47968237-47968256 | MS.gene066960:CDS | 45.0% | |
| CAAGCAAACAATTCCCCCAA+TGG | - | chr6.4:47971778-47971797 | MS.gene066960:intron | 45.0% | |
| CCAAGCTCTCAAATCTTGGT+AGG | - | chr6.4:47969308-47969327 | MS.gene066960:intron | 45.0% | |
| CCTACCAAGATTTGAGAGCT+TGG | + | chr6.4:47969311-47969330 | None:intergenic | 45.0% | |
| CCTATGCTCCTGGTTAAATG+AGG | + | chr6.4:47972502-47972521 | None:intergenic | 45.0% | |
| CGATAAGGTTGCTCATTCTC+TGG | + | chr6.4:47969034-47969053 | None:intergenic | 45.0% | |
| GGAAAATAGGGCTTGGAAAG+TGG | - | chr6.4:47968814-47968833 | MS.gene066960:intron | 45.0% | |
| GGACCATAGAACAGCAAATG+AGG | + | chr6.4:47968421-47968440 | None:intergenic | 45.0% | |
| GGTAGCGAAACAAACTACTC+TGG | + | chr6.4:47970887-47970906 | None:intergenic | 45.0% | |
| GTGAACCATAACACTGTCGA+GGG | + | chr6.4:47968245-47968264 | None:intergenic | 45.0% | |
| GTGGAGATTACTGTTGGACA+CGG | + | chr6.4:47971640-47971659 | None:intergenic | 45.0% | |
| GTTATTGAGTGGTTGTTGGG+TGG | - | chr6.4:47969270-47969289 | MS.gene066960:CDS | 45.0% | |
| GTTCCGCGAGCTATCAAATT+GGG | + | chr6.4:47972370-47972389 | None:intergenic | 45.0% | |
| GTTGGGCATTATTGTTTGCC+AGG | - | chr6.4:47971191-47971210 | MS.gene066960:intron | 45.0% | |
| TAGAAGGTCTACCCTTGGTT+AGG | + | chr6.4:47971103-47971122 | None:intergenic | 45.0% | |
| TATACTCCTCCCAGTCCATT+GGG | + | chr6.4:47971796-47971815 | None:intergenic | 45.0% | |
| TATCCTCTCTCCCTAACCAA+GGG | - | chr6.4:47971089-47971108 | MS.gene066960:intron | 45.0% | |
| TCCTTCCTCATCGCAACATT+CGG | - | chr6.4:47973097-47973116 | MS.gene066960:CDS | 45.0% | |
| TGAAGGAACAGAGCCCAAAA+AGG | - | chr6.4:47971840-47971859 | MS.gene066960:intron | 45.0% | |
| TGAAGGTGGAAAATAGGGCT+TGG | - | chr6.4:47968807-47968826 | MS.gene066960:intron | 45.0% | |
| TGCAGTAATACTGCAAGCCA+AGG | + | chr6.4:47970128-47970147 | None:intergenic | 45.0% | |
| TGGGGGAATTGTTTGCTTGT+CGG | + | chr6.4:47971777-47971796 | None:intergenic | 45.0% | |
| TGTGAACCATAACACTGTCG+AGG | + | chr6.4:47968246-47968265 | None:intergenic | 45.0% | |
| TGTTCCGCGAGCTATCAAAT+TGG | + | chr6.4:47972371-47972390 | None:intergenic | 45.0% | |
| ! | AAAAAGACCTTTTCGGCACC+GGG | + | chr6.4:47968499-47968518 | None:intergenic | 45.0% |
| ! | AACAATTCCCCCAATGGACT+GGG | - | chr6.4:47971784-47971803 | MS.gene066960:intron | 45.0% |
| ! | ACTGCCACAAAAACTGACTC+TGG | + | chr6.4:47969158-47969177 | None:intergenic | 45.0% |
| ! | CATAACACTGTCGAGGGTTT+TGG | + | chr6.4:47968239-47968258 | None:intergenic | 45.0% |
| ! | CCTCATTTAACCAGGAGCAT+AGG | - | chr6.4:47972499-47972518 | MS.gene066960:CDS | 45.0% |
| ! | CTGACCAGAGTCAGTTTTTG+TGG | - | chr6.4:47969151-47969170 | MS.gene066960:intron | 45.0% |
| ! | GCTGCAACTTCCTTCTAGTT+TGG | - | chr6.4:47971550-47971569 | MS.gene066960:CDS | 45.0% |
| ! | GGTGGATTCTCCATGCATTT+CGG | + | chr6.4:47971163-47971182 | None:intergenic | 45.0% |
| ! | GTTGATGTTTCAGGTGAAGG+TGG | - | chr6.4:47968793-47968812 | MS.gene066960:CDS | 45.0% |
| ! | TCCTCCGGAGATCATTTTGA+AGG | - | chr6.4:47972083-47972102 | MS.gene066960:intron | 45.0% |
| ! | TTGCTGTTCTATGGTCCATC+AGG | - | chr6.4:47968424-47968443 | MS.gene066960:intron | 45.0% |
| !! | AATGCCCAACATTGACTTGG+TGG | + | chr6.4:47971181-47971200 | None:intergenic | 45.0% |
| !! | AGCCTATGAGGCTGATTTGT+GGG | + | chr6.4:47971131-47971150 | None:intergenic | 45.0% |
| !! | TTGGAAGTGCTAAAAGGTGC+CGG | + | chr6.4:47971008-47971027 | None:intergenic | 45.0% |
| ATACTCCTCCCAGTCCATTG+GGG | + | chr6.4:47971795-47971814 | None:intergenic | 50.0% | |
| ATGCGAGCAGCCAAACTAGA+AGG | + | chr6.4:47971563-47971582 | None:intergenic | 50.0% | |
| CGCTTGGAGTCATTTCGATG+TGG | + | chr6.4:47969759-47969778 | None:intergenic | 50.0% | |
| GAAATGACTCCAAGCGATGC+AGG | - | chr6.4:47969763-47969782 | MS.gene066960:CDS | 50.0% | |
| GATCTCCGGAGGAATGCAAT+TGG | + | chr6.4:47972076-47972095 | None:intergenic | 50.0% | |
| GCACATTAAGACAACGGGAG+CGG | + | chr6.4:47970372-47970391 | None:intergenic | 50.0% | |
| GCATTCTCTCCGCAGAACAA+TGG | - | chr6.4:47970279-47970298 | MS.gene066960:intron | 50.0% | |
| GCTCTTCTCCGCCAAATGTT+TGG | - | chr6.4:47968472-47968491 | MS.gene066960:intron | 50.0% | |
| GCTGACCAATTGCATTCCTC+CGG | - | chr6.4:47972068-47972087 | MS.gene066960:intron | 50.0% | |
| GGCAATAGCTACTACCCGTA+TGG | + | chr6.4:47970809-47970828 | None:intergenic | 50.0% | |
| GGCAATAGCTGCTAACCGTA+TGG | + | chr6.4:47970724-47970743 | None:intergenic | 50.0% | |
| GGTTAGGGAGAGAGGATATC+AGG | + | chr6.4:47971087-47971106 | None:intergenic | 50.0% | |
| TCCTTATGTGCTTCACCGAC+CGG | - | chr6.4:47970986-47971005 | MS.gene066960:CDS | 50.0% | |
| TGTTCTGCGGAGAGAATGCT+GGG | + | chr6.4:47970278-47970297 | None:intergenic | 50.0% | |
| TTGTTCTGCGGAGAGAATGC+TGG | + | chr6.4:47970279-47970298 | None:intergenic | 50.0% | |
| ! | TGGATCCGATGTGTTGTTGC+AGG | - | chr6.4:47968378-47968397 | MS.gene066960:intron | 50.0% |
| !! | AAGTGCTAAAAGGTGCCGGT+CGG | + | chr6.4:47971004-47971023 | None:intergenic | 50.0% |
| !! | CAGCCTATGAGGCTGATTTG+TGG | + | chr6.4:47971132-47971151 | None:intergenic | 50.0% |
| !! | CCTATGAGGCTGATTTGTGG+GGG | + | chr6.4:47971129-47971148 | None:intergenic | 50.0% |
| !! | CTGGTCAGTTTTGGCCTTCT+AGG | + | chr6.4:47969139-47969158 | None:intergenic | 50.0% |
| !! | CTTGAGCACTGTTTTCAGGC+TGG | - | chr6.4:47969688-47969707 | MS.gene066960:CDS | 50.0% |
| !! | GCCTATGAGGCTGATTTGTG+GGG | + | chr6.4:47971130-47971149 | None:intergenic | 50.0% |
| !! | TGATTTGTGGGGGCACTAGA+AGG | + | chr6.4:47971119-47971138 | None:intergenic | 50.0% |
| AGGCCCTCCCTTATGAAGCA+TGG | + | chr6.4:47970672-47970691 | None:intergenic | 55.0% | |
| CACCGGGTCCAAACATTTGG+CGG | + | chr6.4:47968483-47968502 | None:intergenic | 55.0% | |
| CCCCCACAAATCAGCCTCAT+AGG | - | chr6.4:47971126-47971145 | MS.gene066960:intron | 55.0% | |
| CTACCCTTGGTTAGGGAGAG+AGG | + | chr6.4:47971095-47971114 | None:intergenic | 55.0% | |
| CTCCGCCAAATGTTTGGACC+CGG | - | chr6.4:47968478-47968497 | MS.gene066960:intron | 55.0% | |
| GCCGAATGTTGCGATGAGGA+AGG | + | chr6.4:47973101-47973120 | None:intergenic | 55.0% | |
| GGATGAGAGGTAGGCCTAGA+AGG | - | chr6.4:47969122-47969141 | MS.gene066960:intron | 55.0% | |
| GGCACTAGAAGGTCTACCCT+TGG | + | chr6.4:47971108-47971127 | None:intergenic | 55.0% | |
| TACTCCTCCCAGTCCATTGG+GGG | + | chr6.4:47971794-47971813 | None:intergenic | 55.0% | |
| TACTGCAAGCCAAGGTGGAG+AGG | + | chr6.4:47970120-47970139 | None:intergenic | 55.0% | |
| TCCAAGCGATGCAGGCTTTC+AGG | - | chr6.4:47969771-47969790 | MS.gene066960:CDS | 55.0% | |
| TCCTGAAAGCCTGCATCGCT+TGG | + | chr6.4:47969775-47969794 | None:intergenic | 55.0% | |
| TGGTTGTTGGGTGGGACTGT+GGG | - | chr6.4:47969279-47969298 | MS.gene066960:CDS | 55.0% | |
| TTCTATGGTCCATCAGGCGC+AGG | - | chr6.4:47968430-47968449 | MS.gene066960:intron | 55.0% | |
| ! | GTTTTCTTGCCTGCGCCTGA+TGG | + | chr6.4:47968442-47968461 | None:intergenic | 55.0% |
| !! | AATTCCCCCAATGGACTGGG+AGG | - | chr6.4:47971787-47971806 | MS.gene066960:intron | 55.0% |
| CAAGGCGCATCCTATGCTCC+TGG | + | chr6.4:47972512-47972531 | None:intergenic | 60.0% | |
| GCCGGTCGGTGAAGCACATA+AGG | + | chr6.4:47970990-47971009 | None:intergenic | 60.0% | |
| GTGGTTGTTGGGTGGGACTG+TGG | - | chr6.4:47969278-47969297 | MS.gene066960:CDS | 60.0% | |
| ! | CAGGAGCATAGGATGCGCCT+TGG | - | chr6.4:47972510-47972529 | MS.gene066960:intron | 60.0% |
| ! | CGGCACCGGGTCCAAACATT+TGG | + | chr6.4:47968486-47968505 | None:intergenic | 60.0% |
| ! | GTTTGGACCCGGTGCCGAAA+AGG | - | chr6.4:47968489-47968508 | MS.gene066960:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 47968211 | 47973123 | 47968211 | ID=MS.gene066960 |
| chr6.4 | mRNA | 47968211 | 47973123 | 47968211 | ID=MS.gene066960.t1;Parent=MS.gene066960 |
| chr6.4 | exon | 47973040 | 47973123 | 47973040 | ID=MS.gene066960.t1.exon1;Parent=MS.gene066960.t1 |
| chr6.4 | CDS | 47973040 | 47973123 | 47973040 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
| chr6.4 | exon | 47972824 | 47972934 | 47972824 | ID=MS.gene066960.t1.exon2;Parent=MS.gene066960.t1 |
| chr6.4 | CDS | 47972824 | 47972934 | 47972824 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
| chr6.4 | exon | 47972496 | 47972528 | 47972496 | ID=MS.gene066960.t1.exon3;Parent=MS.gene066960.t1 |
| chr6.4 | CDS | 47972496 | 47972528 | 47972496 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
| chr6.4 | exon | 47971460 | 47971628 | 47971460 | ID=MS.gene066960.t1.exon4;Parent=MS.gene066960.t1 |
| chr6.4 | CDS | 47971460 | 47971628 | 47971460 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
| chr6.4 | exon | 47970917 | 47971098 | 47970917 | ID=MS.gene066960.t1.exon5;Parent=MS.gene066960.t1 |
| chr6.4 | CDS | 47970917 | 47971098 | 47970917 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
| chr6.4 | exon | 47969686 | 47969822 | 47969686 | ID=MS.gene066960.t1.exon6;Parent=MS.gene066960.t1 |
| chr6.4 | CDS | 47969686 | 47969822 | 47969686 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
| chr6.4 | exon | 47969473 | 47969571 | 47969473 | ID=MS.gene066960.t1.exon7;Parent=MS.gene066960.t1 |
| chr6.4 | CDS | 47969473 | 47969571 | 47969473 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
| chr6.4 | exon | 47969230 | 47969299 | 47969230 | ID=MS.gene066960.t1.exon8;Parent=MS.gene066960.t1 |
| chr6.4 | CDS | 47969230 | 47969299 | 47969230 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
| chr6.4 | exon | 47969064 | 47969138 | 47969064 | ID=MS.gene066960.t1.exon9;Parent=MS.gene066960.t1 |
| chr6.4 | CDS | 47969064 | 47969138 | 47969064 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
| chr6.4 | exon | 47968776 | 47968821 | 47968776 | ID=MS.gene066960.t1.exon10;Parent=MS.gene066960.t1 |
| chr6.4 | CDS | 47968776 | 47968821 | 47968776 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
| chr6.4 | exon | 47968211 | 47968269 | 47968211 | ID=MS.gene066960.t1.exon11;Parent=MS.gene066960.t1 |
| chr6.4 | CDS | 47968211 | 47968269 | 47968211 | ID=cds.MS.gene066960.t1;Parent=MS.gene066960.t1 |
| Gene Sequence |
| Protein sequence |